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Wild Boar (wild + boar)
Selected AbstractsGenome-wide linkage and QTL mapping in porcine F2 families generated from Pietrain, Meishan and Wild Boar crossesJOURNAL OF ANIMAL BREEDING AND GENETICS, Issue 6 2003H. Geldermann Summary Three informative pig F2 families based on European Wild Boar (W), Meishan (M) and Pietrain (P) crosses have been used for genome-wide linkage and quantitative trait loci (QTL) analysis. Altogether 129 microsatellites, 56 type I loci and 46 trait definitions (specific to growth, fattening, fat deposition, muscling, meat quality, stress resistance and body conformation) were included in the study. In the linkage maps of M × P, W × P and W × M families, average spacing of markers were 18.4, 19.7 and 18.8 cM, the numbers of informative meioses were 582, 534 and 625, and the total lengths of autosomes measured were 27.3, 26.0 and 26.2 Morgan units, respectively. Maternal maps were on average 1.3 times longer than paternal maps. QTLs contributing more than 3% of F2 phenotypic variance could be identified at p < 0.05 chromosome-wide level. Differences in the numbers and positions of QTLs were observed between families. Genome-wide significant QTL effects were mapped for growth and fattening traits on eight chromosomes (1, 2, 4, 13, 14, 17, 18 and X), for fat deposition traits on seven chromosomes (1, 2, 3, 4, 6, 7 and X), for muscling traits on 11 chromosomes (1, 2, 3, 4, 6, 7, 8, 12, 14, 15 and X), for meat quality and stress resistance traits on seven chromosomes (2, 3, 6, 13, 16, 18 and X), and QTLs for body-conformation traits were detected on 14 chromosomes. Closely correlated traits showed similar QTL profiles within families. Major QTL effects for meat quality and stress resistance traits were found on SSC6 in the interval RYR1-A1BG in the W × P and M × P families, and could be attributed to segregation of the RYR1 allele T derived from Pietrain, whereas no effect in the corresponding SSC6 interval was found in family W × M, where Wild Boar and Meishan both contributed the RYR1 allele C. QTL positions were mostly similar in two of the three families for body conformation traits and for growth, fattening, fat deposition and muscling traits, especially on SSC4 (interval SW1073-NGFB). QTLs with large effects were also mapped on SSC7 in the major histocompatibility complex (MHC) (interval CYP21A2-S0102) and affected body length, weight of head and many other traits. The identification of DNA variants in genes causative for the QTLs requires further fine mapping of QTL intervals and a positional cloning. However, for these subsequent steps, the genome-wide QTL mapping in F2 families represents an essential starting point and is therefore significant for animal breeding. Zusammenfassung Drei informative F2 -Familien, die aus Kreuzungen von Europäischem Wildschwein (W), Meishan (M) und Pietrain (P) erstellt worden waren, wurden für eine genomweite Kopplungs- und QTL-Analyse benutzt. Insgesamt wurden 129 Mikrosatellitenloci, 56 Type-I-Loci und 46 Merkmalsdefinitionen (für Wachstum, Mastleistung, Fettansatz, Bemuskelung, Fleischqualität, Stressresistenz und Körperform) in die Untersuchungen einbezogen. In den Kopplungskarten der Familien M × P, W × P und W × M wurden durchschnittliche Markerabstände von 18.4, 19.7 bzw. 18.8 cM erreicht und 582, 534 bzw. 625 informative Meiosen beobachtet. Für die Gesamtlängen der Autosomen wurden in den drei Familien 27.3, 26.0 bzw. 26.2 Morgan-Einheiten gemessen. Die maternalen Kopplungskarten waren durchschnittlich 1.3-fach länger als die paternalen. QTLs, die mehr als 3% der phänotypischen Varianz in der F2 -Generation erklärten, konnten mit p < 0.05 chromosomenweitem Signifikanzniveau nachgewiesen werden. Zwischen den Familien wurden Differenzen in den Anzahlen und Positionen der QTLs beobachtet. Genomweit signifikante QTL-Effekte wurden für Wachstum und Fettansatz auf acht Chromosomen (1, 2, 4, 13, 14, 17, 18 und X) kartiert, für Fettansatz auf sieben Chromosomen (1, 2, 3, 4, 6, 7 und X), für Bemuskelung auf elf Chromosomen (1, 2, 3, 4, 6, 7, 8, 12, 14, 15 und X), für Fleischqualität/Stressresistenz auf sieben Chromosomen (2, 3, 6, 13, 16, 18 und X), und QTLs für die Körperform wurden auf 14 Chromosomen kartiert. Eng korrelierte Merkmale zeigten ähnliche QTL-Profile innerhalb Familien. Die bedeutsamsten QTL-Effekte wurden für Fleischqualitäts- und Stressresistenzmerkmale auf Chromosom 6, Intervall RYR1-A1BG, in den Familien W × P und M × P gefunden, während in diesem Chromosomenintervall in der Familie W × M, in der der RYR1 -Locus keine segregierenden Exon-Allele aufwies, kein QTL zu erkennen war. Mehrere der QTL-Positionen waren für die Körperform wie auch für Wachstum, Mastleistung, Fettansatz und Bemuskelung in zwei von drei Familien ähnlich. Dies galt besonders für Chromosom 4 (Intervall SW1073-NGFB). QTLs mit großen Effekten wurden auf Chromosom 7 im MHC (Intervall CYP21A2-S0102) kartiert; sie beeinflussten Körperlänge, Kopfgewicht, aber auch viele weitere Merkmale. Zur Identifizierung der DNA-Varianten, die einem QTL zugrunde liegen, ist eine Feinkartierung von QTLs und positionale Klonierung erforderlich. Für diese nachfolgenden Untersuchungsmethoden ist jedoch die genomweite QTL-Kartierung in F2 -Familien ein entscheidender Ausgangspunkt; sie ist deshalb bedeutungsvoll für die Tierzüchtung. [source] Linkage and QTL mapping for Sus scrofa chromosome 1JOURNAL OF ANIMAL BREEDING AND GENETICS, Issue 2003P. Beeckmann Summary Linkage maps of Sus scrofa chromosome 1 (SSC1) have been produced using 10 markers in three different F2 families based on crosses of Meishan (M), Pietrain (P) and Wild Boar (W). The maps were similar for the different families and show higher paternal recombination, especially in the interval SW2130,SW803. Quantitative trait loci (QTLs) affecting body conformation, carcass composition, fat deposition and numbers of teats were identified in all three families. Major QTLs were mapped in chromosomal intervals centred at approximately 60, 120 and 170 cM. The QTLs explain up to 8.4% of phenotypic variance in the F2 generation. Pietrain QTL alleles were superior in comparison with Wild Boar and Meishan alleles for most of the trait values. Meishan alleles were associated with highest fat deposition. Additive gene effects were generally larger than dominance effects. QTL profiles on SSC1 differed between families, with the W × P family being most distinct. Zusammenfassung Kopplungskarten für Chromosom 1 (SSC1), die durch die Analyse von 10 Markern erstellt wurden, stimmten in drei untersuchten F2 -Familien (basierend auf Kreuzungen mit Meishan (M), Pietrain (P) und Wildschwein (W)) wie auch mit den bisher publizierten Karten überein. Die geschlechtsspezifischen Karten zeigten eine höhere Frequenz der Rekombinationen in der paternalen Meiose als in der maternalen, besonders im Intervall SW2130 bis SW803. Auf SSC1 konnten bedeutsame QTL-Effekte mit Wirkung auf Wachstum, Schlachtkörperzusammensetzung und Fettansatz sowie die Zitzenzahl in allen drei Familien kartiert werden, insbesondere in den Regionen um 60, 120 und 170 cM. Sie erklärten bis zu 8,4% der phänotypischen Varianz in der F2 -Generation. Pietrain-Allele zeigten positive Auswirkungen auf die meisten Fleischleistungsmerkmale. Meishan-Allele waren mit einer stärkeren Verfettung assoziiert. Es wurden Unterschiede zwischen den QTL-Profilen in den Familien beobachtet, wobei die Familie W × P besonders stark von den QTL-Profilen in den beiden anderen Familien abwich. [source] Linkage and QTL mapping for Sus scrofa chromosome 2JOURNAL OF ANIMAL BREEDING AND GENETICS, Issue 2003S. S. Lee Summary Sus scrofa chromosome 2 (SSC2) linkage maps were generated from three F2 families involving Meishan (M), Pietrain (P) and Wild Boar (W) crosses and the same 10 marker loci. SSC2 linkage maps were similar between families and correspond to published maps. Quantitative trait loci (QTLs) for carcass traits, daily gain and heart weight were identified on SSC2, especially in the intervals 0,20 and 80,90 cM in the M × P family, the intervals 20,50 and 125,140 cM in the W × P family, and the interval 15,70 cM in the W × M family. QTL presence and position varied among families. QTL effects explained up to 10% of F2 phenotypic variance. Pietrain QTL alleles were associated with high muscle and heart mass, high daily gain and low fat deposition and Meishan alleles with high carcass fat content. Wild Boar alleles were associated with leaner carcass but lower daily gain than Meishan alleles. Zusammenfassung Kopplungskarten für Chromosom 2 (SSC2) wurden auf der Basis von drei F2 -Familien aus Kreuzungen von Wildschwein (W), Meishan (M) und Pietrain (P) mit Hilfe von zehn Markern erstellt. Sie zeigten eine gute Übereinstimmung zwischen den Familien und mit den bisher publizierten Karten. Auf SSC2 ließen sich QTLs mit Wirkung auf Schlachtkörperzusammensetzung, tägliche Zunahmen und Herzgewicht nachweisen. Die QTL-Positionen lagen in der Familie M × P in den Regionen 0 bis 20 cM und 80 bis 90 cM, in der Familie W × P in den Regionen 20 bis 50 cM und 125 bis 140 cM und in der Familie W × M in der Region 15 bis 70 cM. Die QTL-Effekte auf SSC2 erklärten bis zu 10% der phänotypischen Varianz in der F2 -Generation. An den QTL-Positionen zeigten Pietrain-Allele positive Auswirkungen auf die Fleischfülle, das Herzgewicht und die täglichen Zunahmen. Meishan-Allele waren mit einer stärkeren Verfettung assoziiert. Im Vergleich zu Meishan-Allelen traten die Wildschwein-Allele mit höherem Fleischanteil und geringeren täglichen Zunahmen auf. [source] Linkage and QTL mapping for Sus scrofa chromosome 11JOURNAL OF ANIMAL BREEDING AND GENETICS, Issue 2003M. Dragos-Wendrich Summary Linkage and QTL maps of Sus scrofa chromosome 11 (SSC11) have been produced based on four microsatellite markers genotyped in three F2 families from Wild Boar (W), Meishan (M) and Pietrain (P) crosses. The maps were similar across the families and in agreement with already published maps. Quantitative Trait Loci (QTLs) were identified in the W × M family and not in the M × P and W × P families. The QTLs affected live weight, loin and neck meat weight, back-fat depth and food consumption, and explained up to 4.7% of the F2 phenotypic variance. Additive and dominance effects were similar in size. The Wild Boar QTL alleles led to higher trait values in comparison with Meishan alleles. Zusammenfassung Kopplungskarten für Chromosom 11 (SSC11), die durch Analyse von vier Mikrosatelliten-Markern in drei F2 -Familien aus Kreuzungen von Wildschwein (W), Meishan (M) und Pietrain (P) erstellt wurden, zeigten eine gute Übereinstimmung zwischen den Familien sowie mit Literaturergebnissen. Quantitative Trait Loci (QTLs) waren in der Familie W × M nachzuweisen, jedoch nicht in den Familien M × P und W × P. Sie beeinflussten Lebendgewicht, Kotelettstranggewicht, Rückenspeckdicke und Futteraufnahme und erklärten bis zu 4,7% der phänotypischen Varianz in der F2 -Generation. Additiv- und Dominanzeffekte waren ähnlich groß. Wildschwein-QTL-Allele führten im Vergleich zu Meishan-Allelen zu höheren Merkmalswerten. [source] Linkage and QTL mapping for Sus scrofa chromosome 12JOURNAL OF ANIMAL BREEDING AND GENETICS, Issue 2003G. Yue Summary The SSC12 (Sus scrofa chromosome 12) linkage and QTL maps were generated using 11 markers, of which seven to 10 have been used in the three F2 families based on Wild Boar (W), Meishan (M) and Pietrain (P) crosses. Linkage maps showed identical marker order among the families, but differed in total lengths. They were in agreement with the already published maps, except for the order SWR1021,SW605. Most quantitative trait loci (QTLs) affected fat or meat content in carcass, but were also found for some other traits (heart weight, CK20 values and teat number). They explained up to 5.4% of F2 phenotypic variance. Meishan alleles had stimulating effects on fat deposition and decreasing effects on lean content and CK20 value. The QTL profiles differed between families, with QTL effects in the vicinity of the GH1 locus found solely in the M × P family. Zusammenfassung Auf der Basis von elf Markern wurden Kopplungs- und QTL-Karten für Chromosom 12 (SSC12) in drei F2 -Familien aus Kreuzungen von Wildschwein (W), Meishan (M) und Pietrain (P) erstellt. Hierbei wurden sieben bis zehn Marker pro F2 -Familie benutzt. Die Kopplungskarten zeigten eine gleichartige Anordnung der Loci für alle Familien, jedoch mit verschiedenen Kartenlängen. Sie stimmen, außer in der Anordnung SWR1021,SW605, mit bereits publizierten Karten überein. Quantitative Trait Loci (QTLs) waren hauptsächlich für Merkmale des Fett-oder Fleischanteils im Schlachtkörper festzustellen, daneben aber auch für weitere Merkmale (Herzgewicht, CK20 -Wert, Zitzenzahl). Sie erklärten bis zu 5,4% der phänotypischen Varianz in der F2 -Generation. Meishan-Allele waren assoziiert mit einer Steigerung des Fettansatzes sowie einer Reduktion der Anteile wertvoller Teilstücke und der CK20 -Werte. Die QTL-Profile unterschieden sich zwischen den Familien und ließen Assoziationen mit dem GH1 -Locus nur in der Familie M × P erkennen. [source] Vegetable and animal food sorts found in the gastric content of Sardinian Wild Boar (Sus scrofa meridionalis)JOURNAL OF ANIMAL PHYSIOLOGY AND NUTRITION, Issue 5-6 2007W. Pinna Summary Authors report results emerging from gastric content analysis from n. 96 wild boars hunted in Sardinia isle, during the hunting tide (2001,2005), from November to January. Mean pH of the gastric content was 3.77 ± 0.69. Mean total capacity (TC) of each stomach was 1702 ± 680 g. Mean Stuff ratio (CW/TC) between the content weight (CW) and stomachs TC was 0.45. Food categories found in animal stomachs were: 19 categories of vegetal species (Allium spp., Arbutus unedo, Arisarum vulgare, Avena fatua, Avena sativa, Castanea sativa, Ceratonia siliqua, Chamaerops umilis, Cichorium intybus, Hordeum sativum, Juniperus oxycedrus, Myrtus communis, Olea europea, Pirus amygdaliformis, Pistacia lentiscus, Quercus spp., Rhamnus alaternus, Triticum durum, Zea mais); 11 categories of animal species (Agriotes lineatus, Apodemus sylvaticus dicrurus, Chalcides chalcides, Chalcides ocellatus tiligugu, Crematogaster scutellaris, Forficula auricularia, Helix aspersa, Lumbricus terrestris, Ovis aries, Podarcis tiliguerta tiliguerta, Scolopendra cingulata); three categories were identified in general terms (insects larvae, hairs of mammals, feathers of birds). Food categories found in the stomach contents of Sus scrofa meridionalis confirm observations by other researchers who report the prevalence of vegetables in spite of animal food sorts in the wild boar diet in Italian regions. [source] Press responses to the presence of free-living Wild Boar (Sus scrofa) in southern EnglandMAMMAL REVIEW, Issue 4 2002M. J. Goulding ABSTRACT Wildlife management and conservation programmes are likely to attract media attention, especially when the programmes in question involve large mammals. The present study surveyed the response of the press (national and local newspapers, and magazines) to the existence of two populations of free-living Wild Boar (Sus scrofa) that established in southern England in the early 1990s, following the escape of animals from captivity. One-hundred and seven target articles from 46 different titles were searched for references to 18 separate issues related to topics such as agricultural damage, risk to humans and ecological impact. The presence of free-living Wild Boar in the English countryside attracted predominantly negative press coverage: the issues most frequently raised by newspaper and magazine articles were that the animals constitute a danger to the public, damage agricultural crops, predate livestock and transmit disease. A minority of articles argued that the animals should be conserved, mainly on the grounds that they could be hunted for meat. There was relatively little coverage of environmental issues, and what there was tended to focus on detrimental effects of Wild Boar on native flora and fauna. We conclude that management and conservation programmes involving large, allegedly dangerous mammals are likely to encounter an adverse press reaction. This is something that the organizers of such programmes may need to take into account when predicting public attitudes. [source] Nine porcine microsatellite loci tested for size homoplasy in genetically diverse breedsANIMAL GENETICS, Issue 3 2005T. Peischl Summary Kind and probability of homoplasy across allelic microsatellite fragments can be investigated using DNA of genetically diverse pig breeds. In this study, nine microsatellite loci (SW1897, SW2427, SW489, SW957, TNFB, IFNG, SW2410, SW2019 and S0215) were analysed using DNA samples of pigs from Vietnam (Indigenous breeds Co, Meo, Muong Khuong, Tap Na) and Germany (European Wild Boar, Piétrain). In a total of 39 sequences, 20 differences within isomorphic alleles were observed in comparison with the respective reference sequences. They affected five of the nine tested microsatellite loci. The majority (18) of SNPs occurred in the 5,-flanking regions of the microsatellite repeats, 10 were found in the 3,-flanking regions and only one SNP occurred within the repeat of the Wild Boar sequence of SW2427. The compound microsatellites IFNG and S0215 were unaffected by size homoplasy (SH) within our material. We conclude that the fragment length analysis of microsatellites is a reliable tool for intraspecific phylogenetic studies because SH rates within a species were low. [source] Melanocortin-4 receptor (MC4R) genotypes have no major effect on fatness in a Large White × Wild Boar intercrossANIMAL GENETICS, Issue 2 2002H. B. Park The melanocortin-4 receptor (MC4R), a G-protein coupled receptor, is implicated in mediating the effect of leptin on food intake and energy balance. A previous candidate gene study reported an association between an MC4R missense mutation (Asp298Asn) and fatness, growth and feed intake in pigs. To assess this association further, we analysed the segregation of this missense mutation in relation to variation in fatness traits using a Wild Boar × Large White intercross. The Wild Boar and Large White founders were homozygous for different MC4R alleles. The MC4R was assigned to the expected region on pig chromosome 1. The statistical evaluation did not reveal any indication of a significant effect on fatness related traits in this pedigree. [source] Wild boar as an important reservoir of hepatitis E virus in western JapanHEPATOLOGY RESEARCH, Issue 3 2007Koji Yano No abstract is available for this article. [source] Wild boars as reservoirs of extended-spectrum beta-lactamase (ESBL) producing Escherichia coli of different phylogenetic groupsJOURNAL OF BASIC MICROBIOLOGY, Issue 6 2009Patrícia Poeta Abstract ESBL-producing E. coli isolates have been isolated from eight of seventy seven faecal samples (10.4%) of wild boars in Portugal. The ESBL types identified by PCR and sequencing were blaCTX-M-1 (6 isolates) and blaCTX-M-1 + blaTEM1-b (2 isolates). Further resistance genes detected included tet (A) or tet (B) (in three tetracycline-resistant isolates), aad A (in three streptomycin-resistant isolates), cml A (in one chloramphenicol-resistant isolate), sul 1 and/or sul 2 and/or sul 3 (in all sulfonamide-resistant isolates). The intI 1 gene encoding class 1 integrase was detected in all ESBL-producing E. coli isolates. One isolate also carried the intI 2 gene, encoding class 2 integrase. The ESBL-producing E. coli isolates could be assigned to phylogenetic groups B1 (3 isolates), B2 (3 isolates) or A (2 isolates). Amino acid change in GyrA protein (Ser83Leu or Asp87Tyr) was detected in three nalidixic acid-resistant and ciprofloxacin-susceptible isolates. Two amino acid changes in GyrA (Ser83Leu + Asp87Asn) and one in ParC (Ser80Ile) were identified in two nalidixic acid- and ciprofloxacin-resistant isolates. As evidenced by this study wild boars could be a reservoir of antimicrobial resistance genes. (© 2009 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim) [source] Refined candidate region specified by haplotype sharing for Escherichia coli F4ab/F4ac susceptibility alleles in pigsANIMAL GENETICS, Issue 1 2010M. Jacobsen Summary Infection of the small intestine by enterotoxigenic Escherichia coli F4ab/ac is a major welfare problem and financial burden for the pig industry. Natural resistance to this infection is inherited as a Mendelian recessive trait, and a polymorphism in the MUC4 gene segregating for susceptibility/resistance is presently used in a selection programme by the Danish pig breeding industry. To elucidate the genetic background involved in E. coli F4ab/ac susceptibility in pigs, a detailed haplotype map of the porcine candidate region was established. This region covers approximately 3.7 Mb. The material used for the study is a three generation family, where the founders are two Wild boars and eight Large White sows. All pigs have been phenotyped for susceptibility to F4ab/ac using an adhesion assay. Their haplotypes are known from segregation analysis using flanking markers. By a targeted approach, the candidate region was subjected to screening for polymorphisms, mainly focusing on intronic sequences. A total of 18 genes were partially sequenced, and polymorphisms were identified in GP5, CENTB2, APOD, PCYT1A, OSTalpha, ZDHHC19, TFRC, ACK1, MUC4, MUC20, KIAA0226, LRCH3 and MUC13. Overall, 227 polymorphisms were discovered in the founder generation. The analysis revealed a large haplotype block, spanning at least 1.5 Mb around MUC4, to be associated with F4ab/ac susceptibility. [source] Spatial pattern of adult trees and the mammal-generated seed rain in the Iberian pearECOGRAPHY, Issue 3 2010Jose M. Fedriani The degree to which plant individuals are aggregated or dispersed co-determines how a species uses resources, how it is used as a resource, and how it reproduces. Quantifying such spatial patterns, however, presents several methodological issues that can be overcome by using spatial point pattern analyses (SPPA). We used SPPA to assess the distribution of P. bourgaeana adult trees and their seeds (within fecal samples) dispersed by three mammals (badger, fox, and wild boar) within a 72-ha plot across a range of spatial scales. Pyrus bourgaeana trees in our study plot (n=75) were clearly aggregated with a critical spatial scale of ca 25,m, and approximately nine randomly distributed tree clusters were identified. As expected from their marking behaviors, the spatial patterns of fecal deposition varied widely among mammal species. Whereas badger feces and dispersed seeds were clearly clustered at small spatial scales (<10,m), boar and fox feces were relatively scattered across the plot. A toroidal shift null model testing for independence indicated that boars tended to deliver seeds to the vicinity of adult trees and thus could contribute to the maintenance and enlargement of existing tree clusters. Badgers delivered feces and seeds in a highly clumped pattern but unlike boars, away from P. bourgaeana neighborhoods; thus, they are more likely to create new tree clusters than boars. The strong tree aggregation is likely to be the result of one or several non-exclusive processes, such as the spatial patterning of seed delivery by dispersers and seedling establishment beneath mother trees. In turn, the distinctive distribution of P. bourgaeana in Doñana appeared to interact with the foraging behavior of its mammalian seed dispersers, leading to neighbourhood-specific dispersal patterns and fruit-removal rates. Our study exemplifies how a detailed description of patterns generates testable hypotheses concerning the ecology of zoochorous. Pyrus bourgaeana dispersers were unique and complementary in their spatial patterning of seed delivery, which likely confers resilience to their overall service and suggests lack of redundancy and expendability of any one species. [source] Dispersal of freshwater invertebrates by large terrestrial mammals: a case study with wild boar (Sus scrofa) in Mediterranean wetlandsFRESHWATER BIOLOGY, Issue 11 2008BRAM VANSCHOENWINKEL Summary 1.,Many invertebrates inhabiting insular aquatic habitats rely on external agents or vectors to disperse. Besides water connections and wind, waterfowl and amphibians are known to mediate passive dispersal of freshwater invertebrates. However, the possibility of dispersal by terrestrial mammals has been largely overlooked. 2.,We investigated the potential of both external and internal zoochorous dispersal of aquatic invertebrates by the wild boar (Sus scrofa) in Mediterranean wetlands in the Camargue (France). As wild boar frequently visit wetlands for feeding and wallowing purposes, we hypothesized that they may be important passive dispersal vectors of aquatic invertebrates at a local scale. Dried mud was collected from selected ,rubbing trees' used by boars to dispose of parasites. Additionally, faecal pellets were collected from different locations in the wetland area. 3.,Seventeen freshwater invertebrate taxa including rotifers, cladocerans, copepods and ostracods hatched from sediment obtained from ,rubbing trees', while invertebrates hatching from dried faeces (10 taxa) were mainly rotifers. Dispersing invertebrates were collected up to 318 m from a nearest potential dispersal source. Both abundance and richness of invertebrates significantly decreased with dispersal distance. 4.,Our results demonstrate that large mammals such as wild boar can act as dispersal vectors of aquatic invertebrates at a local scale in the wetland area of the Camargue and suggest that external transport may be quantitatively more important than internal transport. As wallowing (mud bathing) is common in many terrestrial mammals, this mode of dispersal may be quite widespread. [source] Reconstructing impairment of secretory ameloblast function in porcine teeth by analysis of morphological alterations in dental enamelJOURNAL OF ANATOMY, Issue 1 2006Carsten Witzel Abstract We studied the relationship between the macroscopic appearance of hypoplastic defects in the dental enamel of wild boar and domestic pigs, and microstructural enamel changes, at both the light and the scanning electron microscopic levels. Deviations from normal enamel microstructure were used to reconstruct the functional and related morphological changes of the secretory ameloblasts caused by the action of stress factors during amelogenesis. The deduced reaction pattern of the secretory ameloblasts can be grouped in a sequence of increasingly severe impairments of cell function. The reactions ranged from a slight enhancement of the periodicity of enamel matrix secretion, over a temporary reduction in the amount of secreted enamel matrix, with reduction of the distal portion of the Tomes' process, to either a temporary or a definite cessation of matrix formation. The results demonstrate that analysis of structural changes in dental enamel allows a detailed reconstruction of the reaction of secretory ameloblasts to stress events, enabling an assessment of duration and intensity of these events. Analysing the deviations from normal enamel microstructure provides a deeper insight into the cellular changes underlying the formation of hypoplastic enamel defects than can be achieved by mere inspection of tooth surface characteristics alone. [source] Genetic variation at the alpha-1-fucosyltransferase (FUT1) gene in Asian wild boar and Chinese and Western commercial pig breedsJOURNAL OF ANIMAL BREEDING AND GENETICS, Issue 6 2008W.B. Bao Summary Escherichia coli F18 bacteria producing enterotoxins and/or shigatoxin (ETEC/STEC) are main pathogens that cause oedema disease and postweaning diarrhoea in piglets, and alpha-1-fucosyltransferase (FUT1) gene has been identified as a candidate gene for controlling the expression of ETEC F18 receptor. The genetic variations at nucleotide position 307 in open reading frame of FUT1 gene in one wild boar breed and 20 western commercial and Chinese native pig breeds were investigated by polymerase chain reaction,restriction fragment length polymorphism. The results showed that the genetic polymorphisms of the FUT1 locus were only detected in western pig breeds and the Chinese Taihu (including Meishan pig, Fengjing pig and Erhualian pig), Huai and Lingao pig breeds; only Duroc and Pietrain possessed the resistant AA genotype, while the wild boar and other Chinese pig breeds only presented the susceptible genotype GG. The results indicated that Chinese native pig breeds lack genetic factors providing resistance to ETEC F18 bacteria. The resistant allele to ETEC F18 might originate from European wild boar. It was inferred that oedema and postweaning diarrhoea caused by ETEC F18 have close relationship with the growth rate, which can explain why on the contrary Chinese native pig breeds have stronger resistance to oedema and postweaning diarrhoea in piglets compared with western pig breeds. [source] Litter size and latitude in a large mammal: the wild boar Sus scrofaMAMMAL REVIEW, Issue 3 2010Kirsten A. BYWATER ABSTRACT 1A positive relationship between clutch size or litter size and latitude exists in birds and many species of small mammal. Hitherto, however, analyses for large mammals have failed to provide evidence that litter sizes increase with latitude. 2We collated data from published studies of wild boar in Europe, to analyse the relationship between litter size and latitude in this widely distributed terrestrial mammal. 3Depending on the specific data set (whether only the most reliable data or all available data were included), latitude explained 58% to 72% of the variation in mean litter sizes across studies. On average, litter size increases by approximately 0.15 piglets per degree of latitude. 4A strong correlation between litter size and latitude for wild boar in Europe provides a starting point for demographic modelling of this species of both ecological and economic importance. 5The pattern for wild boar is consistent with Ashmole's explanation for the effects of latitude on reproduction. The contrast between our results and those generated for other large mammals may result from our focus on an herbivore in contrast to previous work which was focused on carnivores. Further work could usefully examine the extent of seasonality in the availability of resources for species of different dietary types. [source] Heterozygosity,fitness correlations and associative overdominance: new detection method and proof of principle in the Iberian wild boarMOLECULAR ECOLOGY, Issue 13 2009AURELIO F. MALO Heterozygosity-fitness correlations (HFC) may result from a genome-wide process , inbreeding , or local effects within the genome. The majority of empirical studies reporting HFCs have attributed correlations to inbreeding depression. However, HFCs are unlikely to be caused by inbreeding depression because heterozygosity measured at a small number of neutral markers is unlikely to accurately capture a genome-wide pattern. Testing the strengths of localized effects caused by associative overdominance has proven challenging. In their current paper, Amos and Acevedo-Whitehouse present a novel test for local HFCs. Using stochastic simulations, they determine the conditions under which single-locus HFCs arise, before testing the strength of the correlation between the neutral marker and a linked gene under selection in their simulations. They used insights gained from simulation to statistically investigate the likely cause of correlations between heterozygosity and disease status using data on bovine tuberculosis infections in a wild boar population. They discover that a single microsatellite marker is an excellent predictor of tuberculosis progression in infected individuals. The results are relevant for wild boar management but, more generally, they demonstrate how single-locus HFCs could be used to identify coding loci under selection in free-living populations. [source] The genetic impact of demographic decline and reintroduction in the wild boar (Sus scrofa): A microsatellite analysisMOLECULAR ECOLOGY, Issue 3 2003C. Vernesi Abstract The reintroduction of wild boar from central Europe after World War II has contributed substantially to the range expansion of this species in Italy, where indiscriminate hunting in earlier times resulted in extreme demographic reduction. However, the genetic impact of such processes is not well-understood. In this study, 105 individuals from Italian and Hungarian wild boar populations were characterized for nine autosomal microsatellite loci. The Hungarian samples, and two central Italian samples from protected areas (parks) where reintroduction is not documented, were assumed to be representative of the genetic composition of the source and the target populations in the reintroduction process, respectively. Animals hunted in the wild in the Florence area of Tuscany (Italy) were then studied to identify the effects of reintroduction. The results we obtained can be summarized as follows: (i) none of the populations analysed shows genetic evidence of demographic decline; (ii) the three parental populations from Italy and Hungary are genetically distinct; however, the low level of divergence appears in conflict with the naming of the Italian and the European subspecies (Sus scrofa majori and Sus scrofa scrofa, respectively); in addition, the Italian groups appear to be as divergent from each other as they are from the Hungarian population; (iii) most of the individuals hunted near Florence are genetically intermediate between the parental groups, suggesting that hybridization has occurred in this area, the average introgression of Hungarian genotypes is 13%, but , 45% of the genetic pool of these individuals can not be directly attributed to any of the parental populations we analysed; (iv) analysis of microsatellite loci, though in a limited number, is an important tool for estimating the genetic effect of reintroduc ion in the wild boar, and therefore for the development of conservation and management strategies for this species. [source] Local attitudes and perceptions toward crop-raiding by orangutans (Pongo abelii) and other nonhuman primates in northern Sumatra, IndonesiaAMERICAN JOURNAL OF PRIMATOLOGY, Issue 10 2010Gail Campbell-Smith Abstract Human,wildlife conflicts, such as crop-raiding, increase as people expand their agricultural activities into wildlife habitats. Crop-raiding can reduce tolerance toward species that are already threatened, whereas potential dangers posed by conflicts with large-bodied species may also negatively influence local attitudes. Across Asia, wild pigs and primates, such as macaques, tend to be the most commonly reported crop raiders. To date, reports of crop-raiding incidents involving great apes have been less common, but incidents involving orangutans are increasingly emerging in Indonesia. To investigate the interplay of factors that might explain attitudes toward crop-raiding by orangutans (Pongo abelii), focal group discussions and semi-structured interviews were conducted among 822 farmers from 2 contrasting study areas in North Sumatra. The first study area of Batang Serangan is an agroforest system containing isolated orangutans that crop-raid. In contrast, the second area of Sidikalang comprises farmlands bordering extensive primary forest where orangutans are present but not reported to crop-raid. Farmers living in Batang Serangan thought that orangutans were dangerous, irrespective of earlier experience of crop-raiding. Farmers placed orangutans as the third most frequent and fourth most destructive crop pest, after Thomas' leaf monkey (Presbytis thomasi), wild boar (Sus scrofa), and long-tailed macaque (Macaca fascicularis). Although most (57%) farmers across both study areas were not scared of wildlife species, more than a quarter (28%) of the farmers' feared orangutans. Farmers in Batang Serangan were generally more tolerant toward crop-raiding orangutans, if they did not perceive them to present a physical threat. Most (67%) Batang Serangan farmers said that the local Forestry Department staff should handle crop-raiding orangutans, and most (81%) said that these officials did not care about such problems. Our results suggest that efforts to mitigate human,orangutan conflict may not, per se, change negative perceptions of those who live with the species, because these perceptions are often driven by fear. Am. J. Primatol. 72:866,876, 2010. © 2010 Wiley-Liss, Inc. [source] Ultrastructure of sperm ,tail stump' defect in wild boarANDROLOGIA, Issue 1 2009M. L. Fischman Summary Sperm ,tail stump' defect was found in ejaculates of a wild boar maintained in captivity. It was in good physical condition, the testes and genital tract were found to be of normal size and consistency. There was no evidence of macroscopic abnormalities at the clinical analysis and at necropsy. The volume and concentration of the semen samples obtained by electroejaculation were lower than normal. The slides examined contained a high level of abnormal spermatozoa (52.7%). The most frequent morphological finding was a droplet-like form attached to the base of the head or a very short stump. The non-stumped spermatozoa had no normal tail but a shortened one. Analysing the histological structure with light microscopy, no ring of spermatozoa was observed lining the lumen of the seminiferous tubules and the characteristically cellular structure was not conserved. The ultrastructural examination evidenced a disorganisation of the normal tubular structure of the flagellum, with lost of regular pattern of the axial bundle of fibrils and the mitochondrial helix. The origin of this abnormality is unknown. [source] Genetic heterogeneity and selection signature at the KIT gene in pigs showing different coat colours and patternsANIMAL GENETICS, Issue 5 2010L. Fontanesi Summary Mutations in the porcine KIT gene (Dominant white locus) have been shown to affect coat colours and colour distribution in pigs. We analysed this gene in several pig breeds and populations (Sicilian black, completely black or with white patches; Cinta Senese; grey local population; Large White; Duroc; Hampshire; Pietrain; wild boar; Meishan) with different coat colours and patterns, genotyping a few polymorphisms. The 21 exons and parts of the intronic regions were sequenced in these pigs and 69 polymorphisms were identified. The grey-roan coat colour observed in a local grey population was completely associated with a 4-bp deletion of intron 18 in a single copy KIT gene, providing evidence that this mutation characterizes the Id allele described in the early genetic literature. The white patches observed in black Sicilian pigs were not completely associated with the presence of a duplicated KIT allele (Ip), suggesting that genetic heterogeneity is a possible cause of different coat colours in this breed. Selection signature was evident at the KIT gene in two different belted pig breeds, Hampshire and Cinta Senese. The same mutation(s) may cause the belted phenotype in these breeds that originated in the 18th,19th centuries from English pigs (Hampshire) and in Tuscany (Italy) in the 14th century (Cinta Senese). Phylogenetic relationships of 28 inferred KIT haplotypes indicated two clades: one of Asian origin that included Meishan and a few Sicilian black haplotypes and another of European origin. [source] Sequence polymorphisms in porcine homologs of murine coat colour-related genesANIMAL GENETICS, Issue 2 2010N. Okumura Summary Herein, we report the variability among 57 porcine homologs of murine coat colour-related genes. We identified single nucleotide polymorphisms (SNPs) and insertions/deletions (InDels) within 44 expressed gene sequences by aligning eight pig complementary DNA (cDNA) samples. The sequence alignment revealed a total of 485 SNPs and 15 InDels. The polymorphisms were then validated by performing matrix-assisted laser desorption/ionization time-of-flight mass spectrometry (MALDI-TOF MS) with reference DNA samples obtained from 384 porcine individuals. Of the 384 individuals, three parents of the experimental F2 family were included to detect polymorphisms between them for linkage mapping. We also genotyped previously reported polymorphisms of 12 genes, and one SNP each in three genes that were detected by performing a BLAST search of the Trace database. A total of 211 SNPs and three InDels were successfully genotyped from our porcine DNA panel. We detected SNPs in 33 of the 44 genes among the parents of an experimental F2 family and then constructed a linkage map of the 33 genes for this family. The linkage assignment of each gene to the porcine chromosomes was consistent with the location of the BAC clone in the porcine genome and the corresponding gene sequence. We confirmed complete substitutions of EDNRB and MLPH in the Jinhua and Clawn miniature breeds, respectively. Furthermore, we identified polymorphic alleles exclusive to each pig group: 13 for Jinhua, two for Duroc, three for Meishan, four for the Japanese wild boar, one for the Clawn miniature pig and four for the Potbelly pig. [source] The phylogeny of Chinese indigenous pig breeds inferred from microsatellite markersANIMAL GENETICS, Issue 1 2005M. Fang Summary A genetic study of 32 local Chinese, three foreign pig breeds [Duroc (DU), Landrace and Yorkshire], and two types of wild boar (Hainan and Dongbei wild boar) based on 34 microsatellite loci was carried out to clarify the phylogeny of Chinese indigenous pig breeds. The allele frequencies, effective numbers of alleles, and the average heterozygosity within populations were calculated. The results showed that the genetic variability of the Lingao pig was the largest, while the Jiaxing pig was the lowest. The greatest distance between domestic pigs was found between Shanggao and DU pig and the shortest was found between Wuzhishan and Lingao pig, respectively. A neighbour-joining tree constructed from Modified Cavalli-Sforza genetic distances divided Chinese pigs into two clusters; four subclusters were also identified. Our results only partly agree with the traditional types of classification and also provide a new relationship among Chinese local pig breeds. Our data also confirmed that Chinese pig breeds have a different origin from European/American breeds and can be utilized in programmes that aim to maintain Chinese indigenous pig breeds. [source] Genetic relationship amongst the major non-coding regions of mitochondrial DNAs in wild boars and several breeds of domesticated pigsANIMAL GENETICS, Issue 3 2001N. Okumura We completed phylogenetic analysis of the major non-coding region of the mitochondrial DNA (mtDNA) from 159 animals of eight Euro-American and six East Asian domesticated pig breeds and 164 Japanese and five European wild boars. A total of 62 mtDNA haplotypes were detected. Alignment of these regions revealed nucleotide variations (including gaps) at 73 positions, including 58 sites with transition nucleotide substitutions, and two transversion substitutions. Phylogenetic analysis of the sequences could not organize domestic pig breeds into discrete clusters. In addition, many of the haplotypes found in members of diverged clustering groups were found primarily in Euro-American pig breeds, indicating extensive introgression of Asian domestic pigs into European breeds. Furthermore, phylogenetic analysis allocated the DNA sequences of non-coding regions into two different groups, and the deepest branchpoint of this porcine phylogeny corresponded to 86 000,136 000 years before present. This time of divergence would predate the historical period when the pig is thought to have been domesticated from the wild boar. [source] Morphological and genetic analysis of Vietnamese Sus scrofa bones for evidence of pig domesticationANIMAL SCIENCE JOURNAL, Issue 6 2008Naotaka ISHIGURO ABSTRACT In the present study, we used morphological and genetic analyzes to distinguish bones of domestic boars from those of wild boars. We analyzed 65 Sus bones (cranium, mandible and teeth) stored in three research institutes in Vietnam and in a village in Vietnam. Based on comparison of bucco-lingual measurements of mandibular parts, the 58 specimens were morphologically classified into two size groups: a large bone group and a small bone group. Analysis of 572-bp mitochondrial DNA (mtDNA) sequences indicated that the large bones had genetic links to wild boar lineage including Ryukyu, Taiwan and Korean wild boars, and that the small bone group was closely related to East Asian domestic pigs. The phylogenetic analysis and parsimonious networks constructed among mtDNA haplotypes belonging to Ryukyu wild boar lineage showed that the Ryukyu wild boar is closely related to the Vietnamese wild boars, and uniquely miniaturized on their islands after the Ryukyu archipelago became isolated from the Asian continent. [source] An outbreak of trichinellosis in farmed wild boarin FinlandAPMIS, Issue 12 2000L. OIVANEN Nine farmed wild boar out of 25 slaughtered from a single farm were condemned at meat inspection because of trichinellosis. With RAPD-PCR, Trichinella spiralis was identified in all positive wild boar. Out of the available serum samples (n = 7), all wild boar which had failed the meat inspection showed seroconversion in ELISA and Western blotting, as did one additional animal which had passed the inspection. The animals became infected during an invasion of rats from an improperly closed dump near the farm. Unfortunately, by the time trichinellosis was discovered in the wild boar, the invasion had already been brought under control; thus, no samples from rats were available. However, having lived through the rat invasion was shown to be a risk factor for trichinellosis in wild boar (relative risk, RR=6.3). In wildlife samples from surrounding areas, sylvatic trichinellosis was found to be very common (74%; n=19 red foxes). Intriguingly, the prevalent species in trichinella-positive foxes differed from that in wild boar, Trichinella nativa and T. spiralis being found in 12 foxes and in one fox, respectively. [source] A NEW METHOD FOR EXTRACTION, ISOLATION AND TRANSESTERIFICATION OF FREE FATTY ACIDS FROM ARCHAEOLOGICAL POTTERYARCHAEOMETRY, Issue 5 2010M. W. GREGG This paper presents evidence for increased recovery of organic residues from archaeological pottery through use of a microwave-assisted liquid chromatography protocol. C16:0 and C18:0 saturated fatty acids were obtained from archaeological potsherds recovered from nine Neolithic settlements in the Middle East dating between 4700 and 7300 cal bc, including materials that had not produced evidence for the survival of any lipid species through use of ,conventional' solvent extraction techniques. Compound-specific isotopic analyses of C16:0 and C18:0 fatty acids in potsherd extracts subsequently revealed ,13C/,12C compositions consistent with modern subcutaneous fats of wild boar and goats pastured on lands adjacent to the Jordan Valley, and residues from a modern pottery vessel used in the manufacturing of butter, cheese and yogurt in central Turkey. These results are presented as an illustration of capabilities of the microwave-assisted recovery protocol. The reclamation of saturated and unsaturated fatty acids from archaeological pottery fragments recovered from a number of the earliest ceramic horizons in the Middle East is herewith reported, and the extraction methods and instrumental analytical techniques are described. [source] Vegetable and animal food sorts found in the gastric content of Sardinian Wild Boar (Sus scrofa meridionalis)JOURNAL OF ANIMAL PHYSIOLOGY AND NUTRITION, Issue 5-6 2007W. Pinna Summary Authors report results emerging from gastric content analysis from n. 96 wild boars hunted in Sardinia isle, during the hunting tide (2001,2005), from November to January. Mean pH of the gastric content was 3.77 ± 0.69. Mean total capacity (TC) of each stomach was 1702 ± 680 g. Mean Stuff ratio (CW/TC) between the content weight (CW) and stomachs TC was 0.45. Food categories found in animal stomachs were: 19 categories of vegetal species (Allium spp., Arbutus unedo, Arisarum vulgare, Avena fatua, Avena sativa, Castanea sativa, Ceratonia siliqua, Chamaerops umilis, Cichorium intybus, Hordeum sativum, Juniperus oxycedrus, Myrtus communis, Olea europea, Pirus amygdaliformis, Pistacia lentiscus, Quercus spp., Rhamnus alaternus, Triticum durum, Zea mais); 11 categories of animal species (Agriotes lineatus, Apodemus sylvaticus dicrurus, Chalcides chalcides, Chalcides ocellatus tiligugu, Crematogaster scutellaris, Forficula auricularia, Helix aspersa, Lumbricus terrestris, Ovis aries, Podarcis tiliguerta tiliguerta, Scolopendra cingulata); three categories were identified in general terms (insects larvae, hairs of mammals, feathers of birds). Food categories found in the stomach contents of Sus scrofa meridionalis confirm observations by other researchers who report the prevalence of vegetables in spite of animal food sorts in the wild boar diet in Italian regions. [source] Antimicrobial-resistant faecal Escherichia coli in wild mammals in central Europe: multiresistant Escherichia coli producing extended-spectrum beta-lactamases in wild boarsJOURNAL OF APPLIED MICROBIOLOGY, Issue 5 2010I. Literak Abstract Aims:, To determine the presence of antibiotic-resistant faecal Escherichia coli in populations of wild mammals in the Czech Republic and Slovakia. Methods and Results:, Rectal swabs or faeces collected during 2006,2008 from wild mammals were spread on MacConkey agar and MacConkey agar containing 2 mg l,1 of cefotaxime. From plates with positive growth, one isolate was recovered and identified as E. coli. Susceptibility to 12 antibiotics was tested using the disk diffusion method. Resistance genes, class 1 and 2 integrons and gene cassettes were detected in resistant isolates by polymerase chain reaction (PCR). Extended-spectrum beta-lactamases (ESBL) were further characterized by DNA sequencing, macrorestriction profiling and determination of plasmid sizes. Plasmid DNA was subjected to EcoRV digestion, transferability by conjugation and incompatibility grouping by multiplex PCR. The prevalence of resistant isolates was 2% in small terrestrial mammals (rodents and insectivores, nE. coli = 242), 12% in wild ruminants and foxes (nE. coli = 42), while no resistant isolates were detected in brown bears (nE. coli = 16). In wild boars (Sus scrofa) (nE. coli = 290), the prevalence of resistant isolates was 6%. Class 1 and 2 integrons with various gene cassettes were recorded in resistant isolates. From wild boars, five (2%, nrectal smears = 293) multiresistant isolates producing ESBL were recovered: one isolate with blaCTX-M-1 + blaTEM-1, three with blaCTX-M-1 and one with blaTEM-52b. The blaCTX-M-1 genes were carried on approx. 90 kb IncI1 conjugative plasmids. Conclusions:, Antibiotic-resistant E. coli occured in populations of wild mammals in various prevalences. Significance and Impact of the Study:, Wild mammals are reservoirs of antibiotic-resistant E. coli including ESBL-producing strains which were found in wild boars. [source] |