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Violet
Kinds of Violet Terms modified by Violet Selected AbstractsAlteration of normal cellular profiles in the scleractinian coral (Pocillopora damicornis) following laboratory exposure to fuel oilENVIRONMENTAL TOXICOLOGY & CHEMISTRY, Issue 12 2006Luc Rougée Abstract Petroleum contamination from oil spills is a continuing threat to our ocean's fragile ecosystems. Herein, we explored the effects of the water-soluble fraction of crude oil on a stony coral, Pocillopora damicornis (Linneaeus 1758). We developed methods for exposing corals to various concentrations of crude oil and for assessing the potential molecular responses of the corals. Corals were exposed to water-accommodated fraction solutions, and appropriate cellular biomarkers were quantified. When compared to the "healthy" control specimens, exposed corals exhibited shifts in biomarker concentrations that were indicative of a shift from homeostasis. Significant changes were seen in cytochrome P450 1-class, cytochrome P450 2-class, glutathione- S -transferase-pi, and cnidarian multixenobiotic resistance protein-1 biomarkers, which are involved the cellular response to, and manipulation and excretion of, toxic compounds, including polycyclic aromatic hydrocarbons. A shift in biomarkers necessary for porphyrin production (e.g., protoporphyrinogen oxidase IX and ferrochelatase) and porphyrin destruction (e.g., heme oxygenase-1 and invertebrate neuroglobin homologue) illustrates only one of the cellular protective mechanisms. The response to oxidative stress was evaluated through measurements of copper/zinc superoxide dismutase-1 and DNA glycosylase MutY homologue-1 concentrations. Likewise, changes in heat shock protein 70 and small heat shock proteins indicated an adjustment in the cellular production of proteins. Finally, the results of this laboratory study were nearly identical to what we observed previously among corals of a different species, Porites lobata, exposed to an oil spill in the field after the grounding of the Merchant Vessel Kyowa Violet. [source] Crystal structure prediction of organic pigments: quinacridone as an exampleJOURNAL OF APPLIED CRYSTALLOGRAPHY, Issue 1 2007N. Panina The structures of the ,, , and , polymorphs of quinacridone (Pigment Violet 19) were predicted using Polymorph Predictor software in combination with X-ray powder diffraction patterns of limited quality. After generation and energy minimization of the possible structures, their powder patterns were compared with the experimental ones. On this basis, candidate structures for the polymorphs were chosen from the list of all structures. Rietveld refinement was used to validate the choice of structures. The predicted structure of the , polymorph is in accordance with the experimental structure published previously. Three possible structures for the , polymorph are proposed on the basis of X-ray powder patterns comparison. It is shown that the , structure in the Cambridge Structural Database is likely to be in error, and a new , structure is proposed. The present work demonstrates a method to obtain crystal structures of industrially important pigments when only a low-quality X-ray powder diffraction pattern is available. [source] Cloning and comparison of phylogenetically related chitinases from Listeria monocytogenes EGD and Enterococcus faecalis V583JOURNAL OF APPLIED MICROBIOLOGY, Issue 6 2009J.J. Leisner Abstract Aims:, To compare enzymatic activities of two related chitinases, ChiA and EF0361, encoded by Listeria monocytogenes and Enterococcus faecalis, respectively. Methods and Results:, The chiA and EF0361 genes were amplified by PCR, cloned and expressed with histidine tags, allowing easy purification of the gene products. ChiA had a molecular weight as predicted from the amino acid sequence, whereas EF0361 was 1840 Da lower than expected because of C-terminal truncation. The ChiA and EF0361 enzymes showed activity towards 4-nitrophenyl N,N,-diacetyl-,- d -chitobioside with Km values of 1·6 and 2·1 mmol l,1, respectively, and kcat values of 21·6 and 6·5 s,1. The enzymes also showed activity towards 4-nitrophenyl ,- d - N, N,, N,-triacetylchitotriose and carboxy-methyl-chitin-Remazol Brilliant Violet but not towards 4-nitrophenyl N- acetyl-,- d -glucosaminide. Chitinolytic specificities of the enzymes were supported by their inactivity towards the substrates 4-nitrophenyl ,- d -cellobioside and peptidoglycan. The pH and temperature profiles for catalytic activities were relatively similar for both the enzymes. Conclusion:, The ChiA and EF0361 enzymes show a high degree of similarity in their catalytic activities although their hosts share environmental preferences only to some extent. Significance and Impact of the Study:, This study contributes to an understanding of the chitinolytic activities by L. monocytogenes and Ent. faecalis. Detailed information on their chitinolytic systems will help define potential reservoirs in the natural environment and possible transmission routes into food-manufacturing plants. [source] Novel hydrogel composite for the removal of water-soluble cationic dyeJOURNAL OF CHEMICAL TECHNOLOGY & BIOTECHNOLOGY, Issue 5 2006Li-Ming Zhang Abstract A novel hydrogel composite was prepared by incorporating Laponite RDS clay into poly(acrylic acid- co - N -vinyl-2-pyrrolodone) hydrogel during in - situ polymerization, and investigated with respect to its adsorption kinetics and isotherm toward Crystal Violet, a widely used cationic dye. It was found that the adsorption kinetics of Crystal Violet onto the hydrogel composite was consistent with the pseudo-second-order model. Compared with pure hydrogel, the hydrogel composite is characterized by greater amounts being adsorbed at equilibrium, and a higher rate constant and initial adsorption rate. By analyzing the experimental data using the Langmuir isotherm equation, an enhanced adsorption capacity was found for the hydrogel composite. Such material is expected to be a good adsorbent for water pollutants such as cationic dyes and treatment of these organic contaminants from wastewater. Copyright © 2006 Society of Chemical Industry [source] Evaluation of the Photodegradation of Crystal Violet upon Light Exposure by Mass Spectrometric and Spectroscopic MethodsJOURNAL OF FORENSIC SCIENCES, Issue 2 2009Céline Weyermann Dr. rer. nat. Abstract:, Crystal violet is a very common dye in ballpoint ink. Recent research suggests that the degradation of triarylmethane dyes gives an indication of the age of a ballpoint pen entry on a document. The main problem for the quantitative evaluation of the degradation is that it is highly dependent on the exposure to light. Moreover additional factors, such as additives and substrate play an important role in this process. The aim of this work is to compare the degradation pathways of the pure dye in water and ethanol upon exposure to xenon light by UV/VIS spectrophotometry and laser desorption ionization. Significant differences have been observed in the products and the kinetics of the degradation. N-demethylation, an expected decomposition process, was found to take place only in aqueous solution and kinetics calculations showed that the degradation occurred 2.5 times faster in ethanol compared to water. The degradation of crystal violet in inks from four ballpoint pens on paper was also studied for entries made over 2,3 years. It was observed that degradation reactions were quenched by the presence of another dye due to competitive absorption. It was also observed that the thickness of a stroke (concentration of ink) influenced the degradation process. In the absence of light only one ballpoint pen showed slight degradation. A better understanding of the influence of the paper, ink composition, and storage conditions is necessary to interpret correctly the age of an ink based on the degradation of dyes. [source] The Detection of Multiply Charged Dyes Using Matrix-Assisted Laser Desorption/Ionization Mass Spectrometry for the Forensic Examination of Pen Ink Dyes Directly from PaperJOURNAL OF FORENSIC SCIENCES, Issue 5 2007Jamie D. Dunn M.S. Abstract:, Laser desorption mass spectrometry (LDMS) is emerging as a technique for questioned document examination. Its use is limited to detecting ink dyes that are neutral or singly charged. Several inks contain dyes that are multiply charged and LDMS cannot be employed for their identification. We have successfully detected >20 polyionic dyes that can be used in the manufacture of inks using matrix-assisted laser desorption/ionization (MALDI) MS, directly from paper, with the matrix, 2-(4-hydroxyphenylazo)benzoic acid (HABA), and the additive, diammonium hydrogen citrate (DAHC). For example, Acid Violet 49, a charged dye containing one positively-charged site and two negatively charged sulfonate groups, cannot be detected by LDMS, but forms intact, singly charged ions in the MALDI MS experiment. The method described is also useful for identifying multiply charged dye mixtures that are used in modern pen inks. [source] Optical probing and imaging of live cells using SERS labelsJOURNAL OF RAMAN SPECTROSCOPY, Issue 1 2009Janina Kneipp Abstract During surface-enhanced Raman scattering (SERS), molecules exhibit a significant increase in their Raman signals when attached, or in very close vicinity, to gold or silver nanostructures. This effect is exploited as the basis of a new class of optical labels. Here we demonstrate robust and sensitive SERS labels as probes for imaging live cells. These hybrid labels consist of gold nanoparticles with Rose Bengal or Crystal Violet attached as reporter molecules. These new labels are stable and nontoxic, do not suffer from photobleaching, and can be excited at any excitation wavelength, even in the near infrared. SERS labels can be detected and imaged through the specific Raman signatures of the reporters. In addition, surface-enhanced Raman spectroscopy in the local optical fields of the gold nanoparticles also provides sensitive information on the immediate molecular environment of the label in the cell and allows imaging of the native constituents of the cell. This is demonstrated by images based on a characteristic Raman line of the reporter as well as by displaying lipids based on the SERS signal of the CH deformation/bending modes at ,1470 cm,1. Copyright © 2008 John Wiley & Sons, Ltd. [source] Flowering and dwarfism induced by DNA demethylation in Pharbitis nilPHYSIOLOGIA PLANTARUM, Issue 1 2010Yuiko Iwase Flowering and dwarfism induced by 5-azacytidine and zebularine, which both cause DNA demethylation, were studied in a short-day (SD) plant Pharbitis nil (synonym Ipomoea nil), var. Violet whose photoinduced flowering state does not last for a long period of time. The DNA demethylating reagents induced flowering under non-inductive long-day (LD) conditions. The flower-inducing effect of 5-azacytidine did not last for a long period of time, and the plants reverted to vegetative growth. The progeny of the plants that were induced to flower by DNA demethylation did not flower under the non-inductive photoperiodic conditions. These results suggest that the flowering-related genes were activated by DNA demethylation and then remethylated again in the progeny. The DNA demethylation also induced dwarfism. The dwarfism did not last for a long period of time, was not heritable and was overcome by gibberellin A3 but not by t -zeatin or kinetin. The change in the genome-wide methylation state was examined by methylation-sensitive amplified fragment length polymorphism (MS-AFLP) analysis. The analysis detected many more polymorphic fragments between the DNA samples isolated from the cotyledons treated with SD than from the cotyledons under LD conditions, indicating that the DNA methylation state was altered by photoperiodic conditions. Seven LD-specific fragments were extracted from the gel of the MS-AFLP and were sequenced. One of these fragments was highly homologous with the genes encoding ribosomal proteins. [source] Comparison of negative ion electrospray mass spectra measured by seven tandem mass analyzers towards library formationRAPID COMMUNICATIONS IN MASS SPECTROMETRY, Issue 2 2008ina Volná A library of negative ion electrospray ionization mass spectra and tandem mass spectra (MS/MS) of sulfonated dyes has been developed for fast identification purposes. The uniform protocol has been elaborated and applied to the measurements of more than 50 anionic dyes. Three collision energies are selected in our protocol which ensures that at least one of them provides a suitable ratio of product ions to the precursor ion. The robustness is investigated with altered values of tuning parameters (e.g. the pressure of the nebulizing gas, the temperature and the flow rate of drying gas, and the mobile phase composition). The results of the inter-laboratory comparison of product ion mass spectra recorded on seven different tandem mass spectrometers (three ion traps, two triple quadrupoles and two hybrid quadrupole time of flight instruments) are presented for four representative anionic dyes , azo dye Acid Red 118, anthraquinone dye Acid Violet 43, triphenylmethane dye Acid Blue 1 and Al(III) metal-complex azo dye. The fragmentation patterns are almost identical for all tandem mass analyzers, only the ratios of product ions differ somewhat which confirms the possibility of spectra transfer among different mass analyzers with the goal of library formation. Copyright © 2007 John Wiley & Sons, Ltd. [source] Spinal Cord Neuronal Pathology in Multiple SclerosisBRAIN PATHOLOGY, Issue 4 2009Christopher P. Gilmore MRCP Abstract The objective of this study was to assess neuronal pathology in the spinal cord in multiple sclerosis (MS), both within myelinated and demyelinated tissue. Autopsy material was obtained from 38 MS cases and 21 controls. Transverse sections were taken from three spinal cord levels and stained using Luxol Fast Blue/Cresyl Violet and myelin protein immunohistochemistry. Measurements of neuronal number and size were made for all neurons within the anterior horns of the gray matter. Neurons were classified as motoneurons or interneurons according to size criteria. In comparison with controls, both motoneuron and interneuron number were reduced in MS cases at the upper cervical (interneuron P = 0.0549; motoneuron P = 0.0073) and upper thoracic (interneuron P = 0.0507; motoneuron P = 0.0144), but not the lumbar level. Interneuron cross-sectional area was reduced in MS cases at all levels (upper cervical, P = 0.0000; upper thoracic, P = 0.0002; lumbar, P = 0.0337). Neuronal loss appears to be predominantly related to local gray matter plaques, whereas interneuron atrophy occurs in both myelinated and demyelinated areas. [source] ChemInform Abstract: Trivinylogues of Crystal Violet: Synthesis and Absorption Properties of New Near-IR DyesCHEMINFORM, Issue 20 2001Saumitra Sengupta Abstract ChemInform is a weekly Abstracting Service, delivering concise information at a glance that was extracted from about 100 leading journals. To access a ChemInform Abstract of an article which was published elsewhere, please select a "Full Text" option. The original article is trackable via the "References" option. [source] Discrimination of G-Quadruplexes from Duplex and Single-Stranded DNAs with Fluorescence and Energy-Transfer Fluorescence Spectra of Crystal VioletCHEMISTRY - A EUROPEAN JOURNAL, Issue 4 2009De-Ming Kong Dr. Abstract G-rich nucleic acid sequences with the potential to form G-quadruplex structures are common in biologically important regions. Most of these sequences are present with their complementary strands, so the development of a sensitive biosensor to distinguish G-quadruplex and duplex structures and to determine the competitive ability of quadruplex to duplex structures has received a great deal of attention. In this work, the interactions between two triphenylmethane dyes (malachite green (MG) and crystal violet (CV)) and G-quadruplex, duplex, or single-stranded DNAs were studied by fluorescence spectroscopy and energy-transfer fluorescence spectroscopy. Good discrimination between quadruplexes and duplex or single-stranded DNAs can be achieved by using the fluorescence spectrum of CV or the energy-transfer fluorescence spectra of CV and MG. In addition, by using energy-transfer fluorescence titrations of CV with G-quadruplexes, the binding-stoichiometry ratios of CV to G-quadruplexes can be determined. By using the fluorescence titrations of G-quadruplex,CV complexes with C-rich complementary strands, the fraction of G-rich oligonucleotide that engages in G-quadruplex structures in the presence of the complementary sequence can be measured. This study may provide a simple method for discrimination between quadruplexes and duplex or single-stranded DNAs and for measuring G-quadruplex percentages in the presence of the complementary C-rich sequences. [source] Equilibrium and kinetic studies of the cationic dye removal capability of a novel biosorbent Tamarindus indica from textile wastewaterCOLORATION TECHNOLOGY, Issue 5 2010Shooka Khorramfar In this paper, the use of tamarind hull biosorbent (Tamarindus indica) has been investigated to remove cationic dyes from textile eflluent. Basic Violet 6 and Basic Red 18 were used as cationic dye models. The surface characteristics of tamarind hull were investigated using Fourier Transform,infrared and scanning electron microscopy. The influence of process variables such as adsorbent dosage, initial dye concentration and pH were studied. The presence of fuctional groups such as hydroxy and amine groups onto the tamarind hull surface were proved by Fourier Transform,infrared analysis. Data were evaluated for compliance with the Langmuir and Freundlich isotherm models. The results indicated that the data for adsorption of Basic Violet 6 and Basic Red 18 onto tamarind hull fitted well with the Freundlich isotherm model. Also, the adsorption kinetics of Basic Violet 6 and Basic Red 18 on biosorbent was studied. The rates of sorption were found to conform to pseudo-second-order kinetics with good correlation. Results indicated that tamarind hull could be used as a biosorbent to remove cationic organics from contaminated watercourses. [source] Visualizing neurons one-by-one in vivo: Optical dissection and reconstruction of neural networks with reversible fluorescent proteinsDEVELOPMENTAL DYNAMICS, Issue 8 2006Shinsuke Aramaki Abstract A great many axons and dendrites intermingle to fasciculate, creating synapses as well as glomeruli. During live imaging in particular, it is often impossible to distinguish between individual neurons when they are contiguous spatially and labeled in the same fluorescent color. In an attempt to solve this problem, we have taken advantage of Dronpa, a green fluorescent protein whose fluorescence can be erased with strong blue light, and reversibly highlighted with violet or ultraviolet light. We first visualized a neural network with fluorescent Dronpa using the Gal4-UAS system. During the time-lapse imaging of axonal navigation, we erased the Dronpa fluorescence entirely; re-highlighted it in a single neuron anterogradely from the soma or retrogradely from the axon; then repeated this procedure for other single neurons. After collecting images of several individual neurons, we then recombined them in multiple pseudo-colors to reconstruct the network. We have also successfully re-highlighted Dronpa using two-photon excitation microscopy to label individual cells located inside of tissues and were able to demonstrate visualization of a Mauthner neuron extending an axon. These "optical dissection" techniques have the potential to be automated in the future and may provide an effective means to identify gene function in morphogenesis and network formation at the single cell level. Developmental Dynamics 235:2192,2199, 2006. © 2006 Wiley-Liss, Inc. [source] Fast visible dye staining of proteins in one- and two-dimensional sodium dodecyl sulfate-polyacrylamide gels compatible with matrix assisted laser desorption/ionization-mass spectrometryELECTROPHORESIS, Issue 7-8 2004Jung-Kap Choi Abstract A fast and matrix assisted laser desorption/ionization-mass spectrometry (MALDI-MS) compatible protein staining method in one- and two-dimensional sodium dodecyl sulfate-polyacrylamide gel electrophoresis (1- and 2-D SDS-PAGE) is described. It is based on the counterion dye staining method that employs oppositely charged two dyes, zincon (ZC) and ethyl violet (EV) to form an ion-pair complex. The protocol, including fixing, staining and quick washing steps, can be completed in 1,1.5 h depending upon gel thickness. It has a sensitivity of 4,8 ng, comparable to that of colloidal Coomassie Brilliant Blue G (CBBG) staining with phosphoric acid in the staining solution. The counterion dye stain does not induce protein modifications that complicate interpretation of peptide mapping data from MS. Considering the speed, sensitivity and compatibility with MS, the counterion dye stain may be more practical than any other dye-based protein stains for routine proteomic researches. [source] Background-free, fast protein staining in sodium dodecyl sulfate polyacrylamide gel using counterion dyes, zincon and ethyl violetELECTROPHORESIS, Issue 24 2002Jung-Kap Choi Abstract A background-free, fast protein staining method in polyacrylamide gel electrophoresis using an acidic dye, zincon (ZC) and a basic dye, ethyl violet (EV) is described. It is based on the counterion dye staining technique that employs two oppositely charged dyes to form an ion-pair complex in staining solution. The selective binding of free dye molecules to proteins in acidic solution produces bluish violet-colored bands. It is a rapid and end-point staining procedure, involving only fixing and staining steps that are completed in 1,1.5 h. The detection limit of this method is 8,15 ng of protein that is comparable to the sensitivity of the colloidal Coomassie Brilliant Blue G (CBBG) stain. Due to its sensitivity and speed, this stain may be more practical than any other dye-based stains for routine laboratory purposes. [source] Status Epilepticus,Induced Neuronal Loss in Humans Without Systemic Complications or EpilepsyEPILEPSIA, Issue 8 2000Denson G. Fujikawa Summary: Purpose: To determine the regional distribution of neuronal damage caused strictly by status epilepticus (SE) without systemic complications, underlying brain pathology, or a history of preexisting epilepsy. Methods: The medical records and electroencephalograms (EEGs) of three deceased patients who developed SE in the hospital were reviewed. Their brains were formalin-fixed, and 17 brain regions were selected, embedded in paraffin, and sectioned. Alternate sections were stained with either hematoxylin and eosin and cresyl violet to determine the extent of neuronal loss and gliosis or glial fibrillary astrocytic protein to confirm the extent of astrocytic proliferation. Results: The three patients died 11 to 27 days after the onset of focal motor SE; none had hypotension, hypoxemia, hypoglycemia, or significant hyperthermia. Two patients had no prior seizures and no underlying brain pathology. The third patient, who had leptomeningeal carcinomatosis, had one seizure 2 months before the onset of SE. The duration of SE was 8.8 hours to 3 days. EEGs showed unilateral temporal lobe sharp-wave discharges in one patient and independent temporal lobe sharp-wave discharges bilaterally in the other two patients. In addition to widespread neuronal loss and reactive gliosis in the hippocampus, amygdala, dorsomedial thalamic nucleus, and Purkinje cell layer of the cerebellum, we report for the first time periamygdaloid (piriform) and entorhinal cortical damage occurring acutely after SE in humans. Conclusions: In the absence of systemic complications or preexisting epilepsy, SE produces neuronal loss in a distribution similar to that from domoic acid-induced SE in humans and from kainic acid- and pilocarpine-induced SE in rats. [source] Crystal structure and enzymatic properties of a bacterial family 19 chitinase reveal differences from plant enzymesFEBS JOURNAL, Issue 21 2006Ingunn A. Hoell We describe the cloning, overexpression, purification, characterization and crystal structure of chitinase G, a single-domain family 19 chitinase from the Gram-positive bacterium Streptomyces coelicolor A3(2). Although chitinase G was not capable of releasing 4-methylumbelliferyl from artificial chitooligosaccharide substrates, it was capable of degrading longer chitooligosaccharides at rates similar to those observed for other chitinases. The enzyme was also capable of degrading a colored colloidal chitin substrate (carboxymethyl-chitin,remazol,brilliant violet) and a small, presumably amorphous, subfraction of ,-chitin and ,-chitin, but was not capable of degrading crystalline chitin completely. The crystal structures of chitinase G and a related Streptomyces chitinase, chitinase C [Kezuka Y, Ohishi M, Itoh Y, Watanabe J, Mitsutomi M, Watanabe T & Nonaka T (2006) J Mol Biol358, 472,484], showed that these bacterial family 19 chitinases lack several loops that extend the substrate-binding grooves in family 19 chitinases from plants. In accordance with these structural features, detailed analysis of the degradation of chitooligosaccharides by chitinase G showed that the enzyme has only four subsites (, 2 to +,2), as opposed to six (, 3 to +,3) for plant enzymes. The most prominent structural difference leading to reduced size of the substrate-binding groove is the deletion of a 13-residue loop between the two putatively catalytic glutamates. The importance of these two residues for catalysis was confirmed by a site-directed mutagenesis study. [source] New taxa of Allium L. subg.FEDDES REPERTORIUM, Issue 7-8 2008Allium (Alliaceae) from Tajikistan, Uzbekistan The alliances of Allium filidens Regel and A. brevidens Vved. were taxonomically revised. Three subspecies were recognized for A. filidens. The widely distributed typical subspecies is characterized by thick reticulate bulb tunics, relatively short leaf sheathes, and whitish tepals with greenish or bluish median veins. Subspecies ugamicum (Vved.) R.M.Fritsch & F.O.Khass. occurring in Chatkal, Pskem, and Ugam mountain ranges E and NE of Tashkent, has delicate, reticulate bulb tunics, relatively longer leaf sheathes, and faintly blue to violet flowers. Subspecies mogianense R.M.Fritsch & F.O.Khass. occupies a small area of distribution in western Hissar mountain range and differs from subsp. ugamicum by greenish tepals with broad green median veins. A key for determination of these subspecies is given. Allium brevidens subsp. pshikharvium R.M.Fritsch & F.O.Khass. was newly described from higher altitudes of Tajik Vanch, Darvaz, and Peter I. mountain ranges. It differs from the typical subspecies by larger scapes, denser inflorescences, green (not yellowish) tepals with dark-green median veins and violet (not purplish) filaments. (© 2008 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim) Neue Taxa von Allium L. subg. Allium (Alliaceae) aus Tadschikistan und Usbekistan Die Verwandtschaftskreise von Allium filidens Regel and A. brevidens Vved. umfassen jeweils mehrere Unterarten. Die typische Unterart von A. filidens ist weit verbreitet und besitzt dicke, reticulate Zwiebelhüllen, relativ kurze Blattscheiden und weißliche Tepalen mit grünlichem oder bläulichem Mittelnerv. Pflanzen aus den Gebirgen im Norden und Nordosten von Taschkent haben sehr zarte reticulate Zwiebelhüllen, relativ längere Blattscheiden und blaßblaue bis violette Blüten. Sie werden als subsp. ugamicum (Vved.) R.M.Fritsch & F.O.Khass. neu kombiniert. Die neu beschriebene subsp. mogianense R.M.Fritsch & F.O.Khass. ist nur aus dem westlichen Hissar-Gebirge bekannt und unterscheidet sich von subsp. ugamicum durch grünliche Tepalen mit breitem grünem Mittelnerv. Ein Schlüssel der Unterarten wird präsentiert. Aus höheren Gebirgslagen in Tadschikistan wird A. brevidens subsp. pshikharvium R.M.Fritsch & F.O.Khass. neu beschrieben, das sich von der typischen Unterart durch längere Schäfte, dichtere Blütenstände, grüne (nicht gelbliche) Tepalen mit dunkelgrünem Mittelnerv sowie violette (nicht purpurne) Filamente unterscheidet. [source] Investigation of virulence genes in clinical isolates of Yersinia enterocoliticaFEMS IMMUNOLOGY & MEDICAL MICROBIOLOGY, Issue 3 2008Haoxuan Zheng Abstract In this study, we aimed to investigate the distribution of virulence genes in clinical isolates of pathogenic Yersinia enterocolitica. Two thousand six hundred stool samples were collected from 2600 patients with diarrhea, and were tested using the culture method and real-time PCR. Then, all isolates of pathogenic Y. enterocolitica cultured from the culture method were examined for virulence genes (inv, ail, ystA, ystB, ystC, yadA, virF) by PCR and for the presence of plasmid by four phenotypic tests. As a result, 160 pathogenic strains were successfully detected by the culture method, including bio/serotype 1A/unknown (4), 1B/unknown (8), 2/O:9 (39), 2/unknown (7), 3/O:3 (22), 3/unknown (6), 4/O:3 (55), 4/unknown (10) and 5/unknown (9). The positive rate of virulence genes tested in 160 isolates was inv (100%), ail (94%), ystA (93%), ystB (7.5%), ystC (5%), yadA (89%) and virF (82%) while the phenotypic test included autoagglutination (87%), binding of crystal violet (89%), calcium-dependent growth (74%) and Congo red absorption (78%), respectively. Finally, we found that not all pathogenic Y. enterocolitica necessarily carry all traditional virulence genes in both chromosomes and plasmids to cause illness. Perhaps, some of them, lacking some traditional virulence genes, contain other unknown virulence markers that interact with each other and play an important role in the diverse pathogenesis of pathogenic Y. enterocolitica. [source] Nanoporous Alumina Membranes as Diffusion Controlling SystemsADVANCED FUNCTIONAL MATERIALS, Issue 12 2004S. Kipke Abstract This work describes the use of nanoporous alumina membranes for the diffusion of crystal violet molecules, encapsulated in the micelles of sodium dodecylsulfate (SDS), through pores ranging between 20 and 200,nm in diameter. The encapsulation of the crystal violet in SDS micelles is necessary in order to enlarge the size of the molecules to such an extent that the pore size becomes a speed-controlling function. Superior results were obtained when the membrane-containing capsule is placed into a water-filled beaker, and carefully moved by means of a "tipping bridge" in order to prevent diffusion problems in the capsule. Free crystal violet was liberated following diffusion due to the low SDS concentration in the aqueous solution, which was far below the critical micelle concentration (CMC). Micelle formation and encapsulation of crystal violet is shown by UV-visible and fluorescence spectroscopies. The experiments described herein serve as an exploratory test for developing novel drug delivery systems. [source] Synthesis, Structure, and Optical Properties of Terminally Sulfur-Functionalized Core-Substituted Naphthalene-Bisimide DyesHELVETICA CHIMICA ACTA, Issue 9 2006Alfred B, aszczyk Abstract The synthesis, characterization, and optical properties of a series of new 2,6-disubstituted naphthalene-bisimide dyes as molecular rods comprising terminal AcS groups is reported. The first series of dyes (1,3), comprising phenylhetero (Ph-X) core substituents, cover a broad range of the VIS spectrum, ranging from yellow (2) over red (3) to blue (1). The second series of dyes contains benzylhetero (Bn-X) core substituents (4,7). For the same heteroatom connecting the substituent to the naphthalene core, both series were found to display comparable colors. For the second series, the colors were blue (4), red (5), and violet (6, 7). The Ph-X-substituted dyes 1,3 are nonfluorescent, in contrast to the Bn-X-substituted compounds 4,7. This rich variety of optical features that can be adjusted by rather small alterations of the core substituents makes these structurally very comparable molecular rods ideal candidates for optically triggered molecular-transport investigations. Also, thanks to the terminal AcS groups, these compounds can be placed between nobel-metal electrodes for optically triggered transport experiments. [source] An in vitro investigation of the bulk flow of fluid through apical foramina during simulated tooth extraction: a potential confounder in microbiological studies?INTERNATIONAL ENDODONTIC JOURNAL, Issue 4 2001A. Kapalas Aim,The ,pumping action' induced during tooth extraction may cause bacteria suspended in tissue fluids to be transposed from one anatomical compartment to another. Apart from causing bacteraemia, this may lead to inaccuracies in studies evaluating the presence and distribution of bacteria in and around tooth apices. The aim was to investigate the bulk flow of fluid through apical foramina during simulated extraction of teeth in an in vitro model. The influence of the presence or absence of a coronal restoration was also evaluated. Methodology,Twenty extracted single-rooted, human, mature, permanent teeth were used. Standard access cavities were prepared and the root canals located. Standardized micrographs of the apical foramina were obtained and their area (µm2) was calculated by image analysis software. The teeth were then set and sealed into polyvinylsiloxane (rubber base) impression material. Crystal violet dye was inoculated into the coronal half of the root canal system. Tooth extraction movements were simulated in the impression matrix and the leakage of dyes with and without the presence of a coronal restoration was examined. The procedure was repeated, following application of safranin dye in a coronal trough within the simulated rubber base gingival margin at the CEJ. The results were analysed statistically with the independent-samples t -test and the McNemar test. Results,In the absence of a coronal restoration crystal violet leaked out of the apical foramina in 18/20 teeth; conversely safranin leaked into the teeth through the apical foramina in 11/20 cases when applied to the external root surface. In the presence of an intact coronal restoration crystal violet dye leaked out in 6/20 teeth and conversely safranin leaked into 7/20 teeth. The presence of a coronal restoration significantly reduced (P = 0.002) dye leakage out of the root canal system. No associations were found for leakage of dye into the root canal system when applied externally. In addition, the amount of dye leakage was positively correlated with the area of the apical foramen in the presence of a coronal restoration (P = 0.009). Conclusion,The presence of a coronal restoration significantly reduced leakage of dye out of the apical foramen. Microbiological studies on root canals and periapical lesions using extracted teeth should take potential contamination from this source into account. [source] Facile Synthesis of New Full-Color-Emitting BCNO Phosphors with High Quantum Efficiency,ADVANCED MATERIALS, Issue 17 2008Takashi Ogi A novel full-color-emitting phosphor composed of B, C, N, and O atoms is prepared by a one-step solution process from inexpensive precursors at ambient atmosphere and relatively low temperatures (below 900,°C). Emission from this novel phosphor can be tuned from the violet to the near-red, as illustrated in the figure, simply by varying the carbon content in the samples. [source] Study of association thermodynamics between crystal violet and sodium bis(2-ethylhexyl)sulfosuccinate and kinetics of basic fading of crystal violet in microemulsionsINTERNATIONAL JOURNAL OF CHEMICAL KINETICS, Issue 6 2008Zhi Yun Chen The thermodynamics of the association between 4,4,,4,-tris(dimethyl-amino)triphenylmethyl chloride (crystal violet or CV) and sodium bis(2-ethylhexyl)-sulfosuccinate (aerosol OT or AOT) in water/AOT/n -decane microemulsion and the kinetics of the basic hydrolysis of CV in a water-in-oil microemulsion were investigated by UV,vis spectroscopic measurements. An association model of CV and AOT was used to analyze the experimental data to obtain the association constants at various temperatures. By taking the association into account, the "actual" rate constants and the activation energies of the basic hydrolysis of CV in the media of water/AOT/oil were obtained. The difference in thermodynamics and kinetics between the two media of water/AOT/n -decane and water/AOT/isooctane is discussed. © 2008 Wiley Periodicals, Inc. Int J Chem Kinet 40: 294,300, 2008 [source] Uncatalyzed and ruthenium(III)-catalyzed reaction of acidic chlorite with methylene violetINTERNATIONAL JOURNAL OF CHEMICAL KINETICS, Issue 7 2003S. B. Jonnalagadda The kinetics and mechanism of the uncatalyzed and Ru(III)-catalyzed oxidation of methylene violet (3-amino-7-diethylamino-5-phenyl phenazinium chloride) (MV+) by acidic chlorite is reported. With excess concentrations of other reactants, both uncatalyzed and catalyzed reactions had pseudo-first-order kinetics with respect to MV+. The uncatalyzed reaction had first-order dependence on chlorite and H+ concentrations, but the catalyzed reaction had first-order dependence on both chlorite and catalyst, and a fractional order with respect to [H+]. The rate coefficient of the uncatalyzed reaction is (5.72 ± 0.19) M,2 s,1, while the catalytic constant for the catalyzed reaction is (22.4 ± 0.3) × 103 M,1 s,1. The basic stoichiometric equation is as follows: 2MV+ + 7ClO2, + 2H+ = 2P + CH3COOH + 4ClO2 + 3Cl,, where P+ = 3-amino-7-ethylamino-5-phenyl phenazinium-10-N-oxide. Stoichiometry is dependent on the initial concentration of chlorite present. Consistent with the experimental results, pertinent mechanisms are proposed. The proposed 15-step mechanism is simulated using literature; experimental and estimated rate coefficients and the simulated plots agreed well with the experimental curves. © 2003 Wiley Periodicals, Inc. Int J Chem Kinet 35: 294,303, 2003 [source] A novel photochromic time,temperature indicator to support cold chain managementINTERNATIONAL JOURNAL OF FOOD SCIENCE & TECHNOLOGY, Issue 2 2010Judith Kreyenschmidt Summary A detailed investigation of the behaviour of a new printable photochromic time,temperature indicator (TTI) was conducted to characterise its properties under specific temperature conditions and to analyse the influence of ultra violet (UV) light irradiation (activation) on the discolouration process. The reproducibility of the charging process and the discolouration process of the TTI were analysed. For different charging times the calculated activation energies based on the Arrhenius model ranged from 23.2 to 25.3 kcal mol,1 depending on the UV light irradiation (charging time). A quality contour diagram was established to define the appropriate charging time for different kinds of products. Due to the possibility of defining the shelf life of a TTI by different charging times, this novel TTI constitutes a reliable tool to monitor the cold chains of a broad range of food products on their way from production to consumption. [source] SPME/GC/MS and sensory flavour profile analysis for estimation of authenticity of thyme honeyINTERNATIONAL JOURNAL OF FOOD SCIENCE & TECHNOLOGY, Issue 2 2007Demet Manna Summary Volatiles of six commercially obtained thyme honey samples and a pure thyme honey sample were extracted and analysed by Solid phase micro extraction (SPME)/Gas chromatography (GC)/Mass spectrometry (MS) procedure. Excess amount of volatiles such as thymol (trace) and carvacrole (0.66%) that originate from thyme plants indicated adulteration by thyme essential oil in one of the commercial samples. Sensory flavour profile analysis showed that the flavour of pure thyme honey sample consisted of: sweet, honey, lilac, bitter almond, thyme, violet, waxy, sour, ginger, caramel and rose characters. Adulterated honey was detected to be the sweetest sample involving intense thyme flavour without honey character. 3,4,5-Trimethoxybenzaldehyde which is a volatile not found in other unifloral honeys, seems to be a possible marker, but further studies with certified thyme honey samples are necessary in order to confirm the utility of this compound in estimation of authenticity. [source] Preparation and characterization of interpenetration polymer network films based on poly(vinyl alcohol) and poly(acrylic acid) for drug deliveryJOURNAL OF APPLIED POLYMER SCIENCE, Issue 6 2008Yu-Mei Yue Abstract A series of full interpenetrating polymer network (full-IPN) films of poly(acrylic acid) (PAA)/poly (vinyl alcohol) (PVA) were prepared by radical solution polymerization and sequential IPN technology. Attenuated total reflectance-Fourier transform infrared spectroscopy, swelling properties, mechanical properties, morphology, and glass transition temperature of the films were investigated. FTIR spectra analysis showed that new interaction hydrogen bonds between PVA and PAA were formed. Swelling property of the films in distilled water and different pH buffer solution was studied. Swelling ratio increased with increasing PAA content of IPN films in all media, and swelling ratio decreased with increasing PVA crosslink degree. Tensile strength and elongation at break related not only to the constitution of IPNs but also to the swelling ratio of IPNs. Mechanical property of glutaraldehyde (0.5%) for poly(vinyl alcohol) crosslinking was better than that of glutaraldehyde (1.0%). DSC of the IPN films showed only a single glass transition temperature (Tg) for each sample, and Tg data showed a linear relationship with network composition. Morphology was observed a homogeneous structure, indicating the good compatibility and miscibility between PAA and PVA. Potential application of the IPN films in controlled drug delivery was also examined using crystal violet as a model drug. The release rate of the drug was higher at 37°C than 25°C for all IPNs and also increased slightly with decreasing of poly(acrylic acid) content. © 2008 Wiley Periodicals, Inc. J Appl Polym Sci, 2008 [source] Kojic acid reduces the cytotoxic effects of sulfur mustard on cultures containing human melanoma cells in vitroJOURNAL OF APPLIED TOXICOLOGY, Issue 6 2001C. N. Smith Abstract In vivo experiments have shown that melanocytes are more sensitive than keratinocytes to the cytotoxic effects of sulfur mustard when it is applied topically to pig skin.1 It has been hypothesized that this is caused by the uncoupling of the melanogenic pathway by depletion of cellular glutathione, resulting in the uncontrolled production of cytotoxic quinone free-radical species by tyrosinase.2. In the present study, the feasibility of blocking the melanogenic pathway as a means of reducing the cytotoxicity of sulfur mustard was evaluated using kojic acid. Kojic acid is a topically applied depigmenting agent that exerts its effect by acting as a slow-binding, competitive inhibitor of tyrosinase.3 Preincubation of G361 pigmented melanoma cells and mixed cultures of G361 cells and SVK keratinocytes with 2.5 mM kojic acid resulted in significant increases in the viability of these cultures as determined by neutral red (NR) and gentian violet (GV) dye binding assays for up to 48 h following exposure to 50 µM sulfur mustard. The highest levels of protection were seen in the G361 cultures, with a 26.8% increase in culture viability (NR assay) compared with the sulfur-mustard-only controls at 24 h. Preincubation of SVK cells alone with kojic acid resulted in lower increases in viability (2.5% at 24 h by the NR assay). Inhibition of the melanogenic pathway reduces the sensitivity of cultures containing pigment cells to sulfur mustard. © Crown copyright 2001. Reproduced with the permission of Her Majesty's Stationery Office. 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