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Vitro Phosphorylation (vitro + phosphorylation)
Selected AbstractsPhenylalanine inhibition of the phosphorylation of cytoskeletal proteins from cerebral cortex of young rats is prevented by alanineEUROPEAN JOURNAL OF CLINICAL INVESTIGATION, Issue 6 2000Carreras Background Phenylalanine has been considered the main responsible agent for the brain damage that occurs in phenylketonuria. Methods and Results In this work we studied the effect of this amino acid on the in vitro phosphorylation of cytoskeletal proteins of the cerebral cortex of rats. We observed that 2 mM phenylalanine, a concentration usually found in the plasma of phenylketonuric patients, decreased the in vitro32P incorporation into these proteins. In addition, we investigated the effect of alanine on the inhibition of 32P incorporation into cytoskeletal proteins caused by phenylalanine. We observed that 0.5 m m alanine did not alter 32P incorporation but prevented the inhibition provoked by phenylalanine. Conclusion In case the inhibition of cytoskeletal protein phosphorylation by phenylalanine also occurs in human phenylketonuria, it is possible that alanine supplementation to the phenylalanine-restricted diet may be beneficial to these patients. [source] Regulation of calpain B from Drosophila melanogaster by phosphorylationFEBS JOURNAL, Issue 17 2009László Kovács Calpain B is one of the two catalytically competent calpain (calcium-activated papain) isoenzymes in Drosophila melanogaster. Because structural predictions hinted at the presence of several potential phosphorylation sites in this enzyme, we investigated the in vitro phosphorylation of the recombinant protein by protein kinase A as well as by the extracellular signal-regulated protein kinases (ERK) 1 and 2. By MS, we identified Ser845 in the Ca2+ binding region of an EF-hand motif, and Ser240 close to the autocatalytic activation site of calpain B, as being the residues phosphorylated by protein kinase A. In the transducer region of the protease, Thr747 was shown to be the target of the ERK phosphorylation. Based on the results of three different assays, we concluded that the treatment of calpain B with protein kinase A and ERK1 and ERK2 kinases increases the rate of the autoproteolytic activation of the enzyme, together with the rate of the digestion of external peptide or protein substrates. Phosphorylation also elevates the Ca2+ sensitivity of the protease. The kinetic analysis of phosphorylation mimicking Thr747Glu and Ser845Glu calpain B mutants confirmed the above conclusions. Out of the three phosphorylation events tested in vitro, we verified the in vivo phosphorylation of Thr747 in epidermal growth factor-stimulated Drosophila S2 cells. The data obtained suggest that the activation of the ERK pathway by extracellular signals results in the phosphorylation and activation of calpain B in fruit flies. Structured digital abstract ,,MINT-7214239: ERK1 (uniprotkb:P40417) phosphorylates (MI:0217) CalpainB (uniprotkb:Q9VT65) by protein kinase assay (MI:0424) ,,MINT-7214216, MINT-7214228: PKA (uniprotkb:P12370) phosphorylates (MI:0217) CalpainB (uniprotkb:Q9VT65) by protein kinase assay (MI:0424) ,,MINT-7214325: CalpainB (uniprotkb:Q9VT65) cleaves (MI:0194) MAP2C (uniprotkb:P11137) by protease assay (MI:0435) ,,MINT-7214275: ERK2 (uniprotkb:P40417-2) phosphorylates (MI:0217) CalpainB (uniprotkb:Q9VT65) by protein kinase assay (MI:0424) ,,MINT-7214319: CalpainB (uniprotkb:Q9VT65) and CalpainB (uniprotkb:Q9VT65) cleave (MI:0194) by protease assay (MI:0435) [source] Dimer-induced signal propagation in Spo0AMOLECULAR MICROBIOLOGY, Issue 3 2004K. Muchová Summary Spo0A, the response regulator protein controlling the initiation of sporulation in Bacillus, has two distinct domains, an N-terminal phosphoacceptor (or receiver) domain and a C-terminal DNA-binding (or effector) domain. The phosphoacceptor domain mediates dimerization of Spo0A on phosphorylation. A comparison of the crystal structures of phosphorylated and unphosphorylated response regulators suggests a mechanism of activation in which structural changes originating at the phosphorylatable aspartate extend to the ,4,5,5 surface of the protein. In particular, the data show an important role in downstream signalling for a conserved aromatic residue (Phe-105 in Spo0A), the conformation of which alters upon phosphorylation. In this study, we have prepared a Phe-105 to Ala mutant to probe the contribution of this residue to Spo0A function. We have also made an alanine substitution of the neighbouring residue Tyr-104 that is absolutely conserved in the Spo0As of spore-forming Bacilli. The spo0A(Y104A) and spo0A(F105A) alleles severely impair sporulation in vivo. In vitro phosphorylation of the purified proteins by phosphoramidate is unaffected, but dimerization and DNA binding are abolished by the mutations. We have identified intragenic suppressor mutations of spo0A(F105A) and shown that these second-site mutations in the purified proteins restore phosphorylation-dependent dimer formation. Our data support a model in which dimerization and signal transduction between the two domains of Spo0A are mediated principally by the ,4,5,5 signalling surface in the receiver domain. [source] Changes in phosphatidylinositol and phosphatidylinositol monophosphate kinase activities during the induction of somatic embryogenesis in Coffea arabicaPHYSIOLOGIA PLANTARUM, Issue 2 2003María Julissa Ek-Ramos Evidence was obtained for the presence of phosphatidylinositol (PIK) and phosphatidylinositol monophosphate kinase (PIPK) at different developmental stages during somatic embryogenesis in Coffea arabica L. by in vitro phosphorylation of endogenous lipids in the presence of [,- 32P]ATP followed by thin-layer chromatography. The results indicate the existence of a relationship between the development stages that were analysed and the kinases found. In cells without differentiated structures (EC, embryogenic calli) phosphatidylinositol kinase and phosphatidylinositol monophosphate 5-kinase (EC 2.7.1.68) activities were present. These activities increased significantly in the first differentiated stage (PREG, preglobular structures) and decreased as the development stages advanced. Phosphatidylinositol monophosphate (PIP) formation decreased from the globular (GLO) to the cotyledonary (COT) stage. The PIP fraction contained both isomers, PI 3-P and PI 4-P. This demonstrates PI3K (EC 2.7.1.137) and PI4K (EC 2.7.1.67) activity during somatic embryogenesis in Coffea arabica L. When wortmannin, an inhibitor of PI3K and PI4K activities, was included in an in vitro assay, a dose-dependent inhibition of the formation of both isomers was observed. The addition of wortmannin to the induction medium during the PREG stage reduced the number of normal embryos. Our results suggest that PI and PIP kinases and the formation of certain phosphoinositides may play roles in the regulation of somatic embryo development in Coffea arabica L. [source] Protein kinase C-mediated phosphorylation of orphan nuclear receptor TR2: Effects on receptor stability and activityPROTEINS: STRUCTURE, FUNCTION AND BIOINFORMATICS, Issue 15 2005Shaukat Ali Khan Abstract In vivo metabolic labeling showed that orphan nuclear receptor TR2 could be phosphorylated. Systematic studies were conducted using specific kinases/phosphatase inhibitors to determine the enzymes responsible for TR2 phosphorylation and the effects of TR2 phosphorylation on its protein stability and activation of its target gene. The data showed that protein kinase C (PKC)-mediated phosphorylation enhanced the activating ability of TR2 on target gene RAR, as well as its stability through protection from proteosome-mediated degradation. Several PKC-mediated potential serine/threonine phosphorylation sites on TR2 protein were predicted from the computer analysis using NetPhos software (http://us.expasy.org) and were commensurate by in vitro phosphorylation of purified TR2 protein using PKC enzyme. Two phosphorylation sites at Ser-461 and Ser-568 were identified by LC-ESI-MS/MS. Point mutations at Ser-568 or Ser-461 were prepared and evaluated for their biological activity. Ser-568, but not Ser-461, mutation significantly reduced PKC-mediated TR2 protein stability and its transcriptional activity. [source] An integrated strategy for identification and relative quantification of site-specific protein phosphorylation using liquid chromatography coupled to MS2/MS3RAPID COMMUNICATIONS IN MASS SPECTROMETRY, Issue 24 2005Florian Wolschin Reversible and differential multisite protein phosphorylation is an important mechanism controlling the activity of cellular proteins. Here we describe a robust and highly selective approach for the identification and relative quantification of site-specific phosphorylation events. This integrated strategy has three major parts: visualisation of phosphorylated proteins using fluorescently stained polyacrylamide gels, determination of the phosphorylation site(s) using automatic MS3 triggered by the loss of phosphoric acid, and relative quantification of phosphorylation by integrating MS2 - and MS3 -extracted ion traces using a fast-scanning, linear ion trap mass spectrometer. As a test case, recombinant sucrose-phosphate synthase (SPS) from Arabidopsis thaliana (At5g1110) was used for identification and quantification of site-specific phosphorylation. The identified phosphorylation site of the actively expressed protein coincides with the major regulatory in vivo phosphorylation site in spinach SPS. Site-specific differential in vitro phosphorylation of native protein was demonstrated after incubation of the recombinant protein with cold-adapted plant leaf extracts from A. thaliana, suggesting regulatory phosphorylation events of this key enzyme under stress response. Copyright © 2005 John Wiley & Sons, Ltd. [source] p53 is dispensable for the induction of apoptosis after inhibition of protein kinase CK2THE PROSTATE, Issue 2 2010Carolin C. Schneider Abstract BACKGROUND Protein kinase CK2 is a ubiquitously expressed heterotetramer consisting of two catalytic ,/,, and two regulatory , subunits. Expression of CK2 is highly elevated in tumor cells where it protects cells from apoptosis. A variety of different compounds were tested as inhibitors of protein kinase CK2 in order to find new therapy strategies. To analyze the role of p53 in the response to CK2 inhibition we used one of the most specific CK2 inhibitors available, TBB, in different prostate cancer cell lines. METHODS We treated prostate cancer cells with the CK2 inhibitor TBB and determined its effect on CK2 activity by an in vitro phosphorylation assay and its effect on viability by an MTT assay. Furthermore, we analyzed changes in the expression of p53 and PARP cleavage by Western Blot analysis. RESULTS Inhibition of CK2 by TBB led to a decrease in cell viability and apoptosis in two cell lines which express wild-type p53 whereas two other cell lines expressing mutant or no p53 failed to show signs of apoptosis. Moreover, cell lines expressing wild-type p53 showed an increase of the amount of p53 and of its transactivation efficiency. However, down-regulation of p53 by RNAi showed that p53 is not necessary for the induction of apoptosis. CONCLUSIONS Wild-type p53 is not necessary for the induction of apoptosis by TBB in prostate cancer cells. Prostate 70: 126,134, 2010. ©2009 Wiley-Liss, Inc. [source] Human glioma PKC-, and PKC-,II phosphorylate cyclin-dependent kinase activating kinase during the cell cycleCELL PROLIFERATION, Issue 1 2002M. Acevedo-Duncan Cell cycle phase transition is regulated in part by the trimeric enzyme, cyclin-dependent kinase activating kinase (CAK) which phosphorylates and activates cyclin-dependent kinases (cdks). Protein kinase C (PKC) inhibitors prevent cell cycle phase transition, suggesting a fundamental role for PKCs in cell cycle regulation. We report that in glioma cells, CAK (cdk7) is constitutively associated with PKC-,. In vitro phosphorylation, co-immunoprecipitation, and analysis of phosphorylated proteins by autoradiography indicate that CAK (cdk7) is a substrate for PKC-, and PKC-,II hyperphosphorylation. These results establish a role for PKC-, and PKC-,II in the activation of CAK during the glioma cell cycle. [source] Protein kinase C zeta plays an essential role for Mycobacterium tuberculosis -induced extracellular signal-regulated kinase 1/2 activation in monocytes/macrophages via Toll-like receptor 2CELLULAR MICROBIOLOGY, Issue 2 2007Chul-Su Yang Summary This study characterized the upstream signalling molecules involved in extracellular signal-regulated kinase (ERK) 1/2 activation and determined their effects on differential tumour necrosis factor (TNF)-, expression by monocytes/macrophages infected with virulent or avirulent mycobacteria. The avirulent Mycobacterium tuberculosis (MTB) strain H37Ra (MTBRa) induced higher levels of activation of ERK 1/2 and the upstream MAPK kinase (MEK)1 and, subsequently, higher levels of TNF-, expression in human primary monocytes and monocyte-derived macrophages, as compared with MTB strain H37Rv (MTBRv). The MTB-induced activation of ERK 1/2 was not dependent on Ras or Raf. However, inhibition of the activity of atypical protein kinase C (PKC) , decreased the in vitro phosphorylation of MEK, ERK 1/2 activation and subsequent TNF-, induction caused by MTBRv or MTBRa. Toll-like receptor (TLR) 2 was found to play a major role in MTB-induced TNF-, expression and PKC, phosphorylation. Co-immunoprecipitation experiments showed that PKC, interacts physically with TLR2 after MTB stimulation. Moreover, PKC, phosphorylation was increased more in macrophages following MTBRa, versus MTBRv, infection. This is the first demonstration that PKC, interacts with TLR2 to play an essential role in MTB-induced ERK 1/2 activation and subsequent TNF-, expression in monocytes/macrophages. [source] | ||||||||||||||||