ATMOSPHERIC SCIENCE LETTERS, Issue 4 2009
S. K. Henderson-Begg
Abstract To freeze above ,36.5 °C, water requires the presence of an ice nucleus (IN). These can be inert particles or living or dead biological material. As they are the most efficient, inducing freezing at up to ,1.8 °C, bacteria are the most widely studied biological IN. Here, we show that there is a huge repository of IN in lichens which comprise a large biomass and are able to become airborne. The lichen IN are similar to those we have detected in urban air, exhibiting heat sensitivity but resistance to lysozyme. This suggests many airborne IN are non-bacterial and that eukaryotic IN may be more important to atmospheric processes than previously thought. Copyright © 2009 Royal Meteorological Society [source]

Climate, climate change and range boundaries

DIVERSITY AND DISTRIBUTIONS, Issue 3 2010
Chris D. Thomas
Abstract Aim, A major issue in ecology, biogeography, conservation biology and invasion biology is the extent to which climate, and hence climate change, contributes to the positions of species' range boundaries. Thirty years of rapid climate warming provides an excellent opportunity to test the hypothesis that climate acts as a major constraint on range boundaries, treating anthropogenic climate change as a large-scale experiment. Location, UK and global data, and literature. Methods, This article analyses the frequencies with which species have responded to climate change by shifting their range boundaries. It does not consider abundance or other changes. Results, For the majority of species, boundaries shifted in a direction that is concordant with being a response to climate change; 84% of all species have expanded in a polewards direction as the climate has warmed (for the best data available), which represents an excess of 68% of species after taking account of the fact that some species may shift in this direction for non-climatic reasons. Other data sets also show an excess of animal range boundaries expanding in the expected direction. Main conclusions, Climate is likely to contribute to the majority of terrestrial and freshwater range boundaries. This generalization excludes species that are endemic to specific islands, lakes, rivers and geological outcrops, although these local endemics are not immune from the effects of climate change. The observed shifts associated with recent climate change are likely to have been brought about through both direct and indirect (changes to species' interactions) effects of climate; indirect effects are discussed in relation to laboratory experiments and invasive species. Recent observations of range boundary shifts are consistent with the hypothesis that climate contributes to, but is not the sole determinant of, the position of the range boundaries of the majority of terrestrial animal species. [source]

Integrating species life-history traits and patterns of deforestation in amphibian conservation planning

DIVERSITY AND DISTRIBUTIONS, Issue 1 2010
C. G. Becker
Abstract Aim, To identify priority areas for amphibian conservation in southeastern Brazil, by integrating species life-history traits and patterns of deforestation. Location, State of São Paulo, Brazil. Methods, We used the software Marxan to evaluate different scenarios of amphibian conservation planning. Our approach differs from previous methods by explicitly including two different landscape metrics; habitat split for species with aquatic larvae, and habitat loss for species with terrestrial development. We evaluated the effect of habitat requirements by classifying species breeding habitats in five categories (flowing water, still water permanent, still water temporary, bromeliad or bamboo, and terrestrial). We performed analyses using two scales, grid cells and watersheds and also considered nature preserves as protected areas. Results, We found contrasting patterns of deforestation between coastal and inland regions. Seventy-six grid cells and 14 watersheds are capable of representing each species at least once. When accounting for grid cells already protected in state and national parks and considering species habitat requirements we found 16 high-priority grid cells for species with one or two reproductive habitats, and only one cell representing species with four habitat requirements. Key areas for the conservation of species breeding in flowing and permanent still waters are concentrated in southern state, while those for amphibians breeding in temporary ponds are concentrated in central to eastern zones. Eastern highland zones are key areas for preserving species breeding terrestrially by direct or indirect development. Species breeding in bromeliads and bamboos are already well represented in protected areas. Main conclusions, Our results emphasize the need to integrate information on landscape configuration and species life-history traits to produce more ecologically relevant conservation strategies. [source]

Using multi-scale species distribution data to infer drivers of biological invasion in riparian wetlands

DIVERSITY AND DISTRIBUTIONS, Issue 1 2010
Jane A. Catford
Abstract Aim, Biological invasion is a major conservation problem that is of interest to ecological science. Understanding mechanisms of invasion is a high priority, heightened by the management imperative of acting quickly after species introduction. While information about invading species' ecology is often unavailable, species distribution data can be collected near the onset of invasion. By examining distribution patterns of exotic and native plant species at multiple spatial scales, we aim to identify the scale (of those studied) that accounts for most variability in exotic species abundance, and infer likely drivers of invasion. Location, River Murray wetlands, south-eastern Australia. Methods, A nested, crossed survey design was used to determine the extent of variation in wetland plant abundance, grazing intensity and water depth at four spatial scales (reaches, wetland clumps, wetlands, wetland sections), and among three Depth-strata. We examined responses of exotic and native species groups (grouped into terrestrial and amphibious taxa), native weeds and 10 individual species using hierarchical ANOVA. Results, As a group dominated by terrestrial taxa, exotic species cover varied at reach-, wetland- and section-scales. This likely reflects differences in abiotic characteristics and propagule pressure at these scales. Groups based on native species did not vary at any scale examined. Cover of 10 species mostly varied among and within wetlands (patterns unrelated to species' origin or functional group), but species' responses differed, despite individual plants being similar in size. While flora mostly varied among wetlands, exotic cover varied most among reaches (26%), which was attributed to hydrological modification and human activities. Main conclusions, Multi-scale surveys can rapidly identify factors likely to affect species' distributions and can indicate where future research should be directed. By highlighting disproportionate variation in exotic cover among reaches, this study suggests that flow regulation and human-mediated dispersal facilitate exotic plant invasion in River Murray wetlands. [source]

New York's nature: a review of the status and trends in species richness across the metropolitan region

DIVERSITY AND DISTRIBUTIONS, Issue 1 2009
Linda M. Puth
ABSTRACT Aim, The world's population is urbanizing, yet relatively little is known about the ecology of urban areas. As the largest metropolitan area in the USA, New York City is an ideal location to study the effects of urbanization. Here, we aim to produce a better understanding of the state of the research for species richness of flora and fauna across the New York metropolitan region. Location, New York metropolitan region, USA. Methods, We conducted a review of the published and grey literature, in which we targeted studies of species richness, and categorized each study by habitat, location and taxonomic group. Results, We found 79 studies reporting location-specific species richness data, resulting in 261 location-taxonomic group records. Of these, 26 records had data from multiple time periods; 17 showed decreases in species richness, six reported increases and three showed stable species richness. Of these 26 records, most declines were attributed to anthropogenic causes, such as habitat loss/degradation and invasive species, while most increases reflected recovery from major habitat loss or increases in exotic species. Overall, most records (84) were terrestrial, followed by those in freshwater (72) and mixed habitats (61). When parsed by taxonomic group, the most commonly studied groups were plants (76) and mammals (48). Main conclusions, In general, we discovered fewer studies than expected reporting species richness, especially studies reporting species richness for more than one point in time. Most studies that did contain data over time reported declines in species richness, while several studies reporting increasing or stable species richness reflected increases in exotic species. This survey provides a crucial first step in establishing baseline ecological knowledge for the New York metropolitan region that should help prioritize areas for protection, research and development. Furthermore, this research provides insights into the impacts of urbanization across the USA and beyond and should help establish similar frameworks for ecological understanding for other metropolitan regions throughout the world. [source]

Microanatomical diversity of the humerus and lifestyle in lissamphibians

ACTA ZOOLOGICA, Issue 2 2009
Aurore Canoville
Abstract A study of body size and the compactness profile parameters of the humerus of 37 species of lissamphibians demonstrates a relationship between lifestyle (aquatic, amphibious or terrestrial) and bone microstructure. Multiple linear regressions and variance partitioning with Phylogenetic eigenVector Regressions reveal an ecological and a phylogenetic signal in some body size and compactness profile parameters. Linear discriminant analyses segregate the various lifestyles (aquatic vs. amphibious or terrestrial) with a success rate of up to 89.2%. The models built from data on the humerus discriminate aquatic taxa relatively well from the other taxa. However, like previous models built from data on the radius of amniotes or on the femur of lissamphibians, the new models do not discriminate amphibious taxa from terrestrial taxa on the basis of body size or compactness profile data. To make our inference method accessible, spreadsheets (see supplementary material on the website), which allow anyone to infer a lissamphibian lifestyle solely from body size and bone compactness parameters, were produced. No such easy implementation of habitat inference models is found in earlier papers on this topic. [source]

Mapping the geochemistry of the northern Rub' Al Khali using multispectral remote sensing techniques

EARTH SURFACE PROCESSES AND LANDFORMS, Issue 7 2001
Kevin White
Abstract Spatial variations in sand sea geochemistry relate to mixing of different sediment sources and to variations in weathering. Due to problems of accessibility, adequate spatial coverage cannot be achieved using field surveys alone. However, maps of geochemical composition produced from remotely sensed data can be calibrated against limited field data and the results extrapolated over large, inaccessible areas. This technique is applied to part of the Rub' Al Khali in the northern United Arab Emirates. Trend surface analysis of the results suggests that the sand sea at this location can be modelled as an east,west mixing zone of two spectral components: terrestrial reddened quartz sands and marine carbonate sands. Optical dating of these sediments suggests that dune emplacement occurred rapidly around 10 ka BP, when sea level was rising rapidly. The spatial distribution of mineralogical components suggests that this phase of dune emplacement resulted from coastal dune sands being driven inland during marine transgression, thereby becoming mixed with rubified terrestrial sands. Copyright © 2001 John Wiley & Sons, Ltd. [source]

The role of migratory ducks in the long-distance dispersal of native plants and the spread of exotic plants in Europe

ECOGRAPHY, Issue 6 2009
Anne-Laure Brochet
Little is known about the role of migratory waterfowl in the long-distance dispersal (LDD) of seeds. We studied the gut contents of 42 teals Anas crecca collected in the Camargue, southern France, and found intact seeds of 16 species. There was no relationship between the probability that a given seed species was found intact in the lower gut, and the seed hardness or size. The number of seeds found in the oesophagus and gizzard (a measure of ingestion rate) was the only significant predictor of the occurrence of intact seeds in the lower gut, so studies of waterfowl diet can be used as surrogates of dispersal potential. In a literature review, we identified 223 seed species recorded in 25 diet studies of teal, pintail Anas acuta, wigeon A. penelope or mallard A. platyrhynchos in Europe. We considered whether limited species distribution reduces the chances that a seed can be carried to suitable habitat following LDD. Overall, 72% of plant species recorded in duck diets in southern Europe (36 of 50) were also recorded in the north, whereas 97% of species recorded in duck diets in the north (137 of 141) were also recorded in the south. This suggests a great potential for LDD, since most dispersed plants species occur throughout the migratory range of ducks. Migratory ducks are important vectors for both terrestrial and aquatic plant species, even those lacking the fleshy fruits or hooks typically used to identify seeds dispersed by birds. Finally, we show ducks are important vectors of exotic plant species. We identified 14 alien to Europe and 44 native to Europe but introduced to some European countries whose seeds have been recorded in duck diet. [source]

Effects of the North Atlantic Oscillation on growth and phenology of stream insects

ECOGRAPHY, Issue 6 2004
Robert A. Briers
Climatic variation associated with the North Atlantic Oscillation (NAO) influences terrestrial and marine ecosystems, but its effects on river and stream ecosystems are less well known. The influence of the NAO on the growth of stream insects was examined using long-term empirical data on the sizes of mayfly and stonefly nymphs and on water temperature data. Models of egg development and nymphal growth in relation to temperature were used to predict the effect of the NAO on phenology. The study was based in two upland streams in mid-Wales UK that varied in the extent of plantation forestry in their catchments. Winter stream temperatures at both sites were positively related to the winter NAO index, being warmer in positive phases and colder in negative phases. The observed mean size and the simulated developmental period of mayfly nymphs were significantly related to the winter NAO index, with nymphs growing faster in positive phases of the NAO, but the growth of stonefly nymphs was not related to the NAO. This may have been due to the semivoltine stonefly lifecycle, but stonefly nymph growth is also generally less dependent on temperature. There were significant differences in growth rates of both species between streams, with nymphs growing more slowly in the forested stream that was consistently cooler than the open stream. Predicted emergence dates for adult mayflies varied by nearly two months between years, depending on the phase of the NAO. Variation in growth and phenology of stream insects associated with the NAO may influence temporal fluctuations in the composition and dynamics of stream communities. [source]

Dispersal characteristics of three odonate species in a patchy habitat

ECOGRAPHY, Issue 1 2003
S. Angelibert
Dispersal has a potentially profound effect on the dynamics of populations especially when a population occupies a patchy habitat. Ponds surrounded by terrestrial landscape are an example of patchy distribution of physical conditions and constitute "islands" for odonates. Few studies have focussed on dispersal in odonates. We have used the direct method of dispersal observing (capture-mark-recapture technique) in order to estimate the degree of linkage in three patchy populations of odonate localised on three ponds. We also examined the differences in dispersal ability within and among three species (Coenagrion puella, Coenagrion scitulum and Libellula depressa). The ponds were situated in southwest France on a limestone plateau. In this arid area, these ponds constitute the only surface water available and are relatively sparsely distributed. The size of the ponds ranged from 48 to 79 m2 and they were 200 and 775 m apart. We demonstrated that three factors influence the dispersal ability of these odonates. The first is represented by the abiotic factors and especially weather conditions. This determines the number of days that dispersal is possible. The second is interspecific differences. We showed that sensitivity to weather conditions, species size and species behaviour influence dispersal ability. The third factor is the intraspecific characteristics. We demonstrated that there are differences in dispersal ability according to sex and age. To conclude, we discuss the importance of pond management to maintain the existing odonate populations and to facilitate introduction of new populations in this region where little exchange occurs between ponds. [source]

A cross-ecosystem comparison of the strength of trophic cascades

ECOLOGY LETTERS, Issue 6 2002
Jonathan B. Shurin
Abstract Although trophic cascades (indirect effects of predators on plants via herbivores) occur in a wide variety of food webs, the magnitudes of their effects are often quite variable. We compared the responses of herbivore and plant communities to predator manipulations in 102 field experiments in six different ecosystems: lentic (lake and pond), marine, and stream benthos, lentic and marine plankton, and terrestrial (grasslands and agricultural fields). Predator effects varied considerably among systems and were strongest in lentic and marine benthos and weakest in marine plankton and terrestrial food webs. Predator effects on herbivores were generally larger and more variable than on plants, suggesting that cascades often become attenuated at the plant,herbivore interface. Top-down control of plant biomass was stronger in water than on land; however, the differences among the five aquatic food webs were as great as those between wet and dry systems. [source]

Allometric scaling of maximum population density: a common rule for marine phytoplankton and terrestrial plants

ECOLOGY LETTERS, Issue 5 2002
Andrea Belgrano
A primary goal of macroecology is to identify principles that apply across varied ecosystems and taxonomic groups. Here we show that the allometric relationship observed between maximum abundance and body size for terrestrial plants can be extended to predict maximum population densities of marine phytoplankton. These results imply that the abundance of primary producers is similarly constrained in terrestrial and marine systems by rates of energy supply as dictated by a common allometric scaling law. They also highlight the existence of general mechanisms linking rates of individual metabolism to emergent properties of ecosystems. [source]

Molecular evidence for widespread occurrence of Foraminifera in soils

ENVIRONMENTAL MICROBIOLOGY, Issue 9 2010
Franck Lejzerowicz
Summary Environmental SSU rDNA-based surveys are contributing to the dramatic revision of eukaryotic high-level diversity and phylogeny as the number of sequence data increases. This ongoing revolution gives the opportunity to test for the presence of some eukaryotic taxa in environments where they have not been found using classical microscopic observations. Here, we test whether the foraminifera, a group of single-celled eukaryotes, considered generally as typical for the marine ecosystems are present in soil. We performed foraminiferal-specific nested PCR on 20 soil DNA samples collected in contrasted environments. Unexpectedly, we found that the majority of the samples contain foraminiferal SSU rDNA sequences. In total, we obtained 49 sequences from 17 localities. Phylogenetic analysis clusters them in four groups branching among the radiation of early foraminiferal lineages. Three of these groups also include sequences originated from previous freshwater surveys, suggesting that there were up to four independent colonization events of terrestrial and/or freshwater ecosystems by ancestral foraminifera. As shown by our data, foraminifera are a widespread and diverse component of soil microbial communities. Yet, identification of terrestrial foraminiferal species and understanding of their ecological role represent an exciting challenge for future research. [source]

Homologues of nitrite reductases in ammonia-oxidizing archaea: diversity and genomic context

ENVIRONMENTAL MICROBIOLOGY, Issue 4 2010
Rita Bartossek
Summary Ammonia-oxidizing archaea are frequent and ubiquitous inhabitants of terrestrial and marine environments. As they have only recently been detected, most aspects of their metabolism are yet unknown. Here we report on the occurrence of genes encoding potential homologues of copper-dependent nitrite reductases (NirK) in ammonia-oxidizing archaea of soils and other environments using metagenomic approaches and PCR amplification. Two pairs of highly overlapping 40 kb genome fragments, each containing nirK genes of archaea, were isolated from a metagenomic soil library. Between 68% and 85% of the open reading frames on these genome fragments had homologues in the genomes of the marine archaeal ammonia oxidizers Nitrosopumilus maritimus and Cenarchaeum symbiosum. Extensions of NirK homologues with C-terminal fused amicyanin domains were deduced from two of the four fosmids indicating structural variation of these multicopper proteins in archaea. Phylogenetic analyses including all major groups of currently known NirK homologues revealed that the deduced protein sequences of marine and soil archaea were separated into two highly divergent lineages that did not contain bacterial homologues. In contrast, another separated lineage contained potential multicopper oxidases of both domains, archaea and bacteria. More nirK gene variants directly amplified by PCR from several environments indicated further diversity of the gene and a widespread occurrence in archaea. Transcription of the potential archaeal nirK in soil was demonstrated at different water contents, but no significant increase in transcript copy number was observed with increased denitrifying activity. [source]

Relative abundance and diversity of ammonia-oxidizing archaea and bacteria in the San Francisco Bay estuary

ENVIRONMENTAL MICROBIOLOGY, Issue 11 2008
Annika C. Mosier
Summary Ammonia oxidation in marine and estuarine sediments plays a pivotal role in the cycling and removal of nitrogen. Recent reports have shown that the newly discovered ammonia-oxidizing archaea can be both abundant and diverse in aquatic and terrestrial ecosystems. In this study, we examined the abundance and diversity of ammonia-oxidizing archaea (AOA) and betaproteobacteria (,-AOB) across physicochemical gradients in San Francisco Bay , the largest estuary on the west coast of the USA. In contrast to reports that AOA are far more abundant than ,-AOB in both terrestrial and marine systems, our quantitative PCR estimates indicated that ,-AOB amoA (encoding ammonia monooxygenase subunit A) copy numbers were greater than AOA amoA in most of the estuary. Ammonia-oxidizing archaea were only more pervasive than ,-AOB in the low-salinity region of the estuary. Both AOA and ,-AOB communities exhibited distinct spatial structure within the estuary. AOA amoA sequences from the north part of the estuary formed a large and distinct low-salinity phylogenetic group. The majority of the ,-AOB sequences were closely related to other marine/estuarine Nitrosomonas -like and Nitrosospira -like sequences. Both ammonia-oxidizer community composition and abundance were strongly correlated with salinity. Ammonia-oxidizing enrichment cultures contained AOA and ,-AOB amoA sequences with high similarity to environmental sequences. Overall, this study significantly enhances our understanding of estuarine ammonia-oxidizing microbial communities and highlights the environmental conditions and niches under which different AOA and ,-AOB phylotypes may thrive. [source]

Nitrogenase gene diversity and microbial community structure: a cross-system comparison

ENVIRONMENTAL MICROBIOLOGY, Issue 7 2003
Jonathan P. Zehr
Summary Biological nitrogen fixation is an important source of fixed nitrogen for the biosphere. Microorganisms catalyse biological nitrogen fixation with the enzyme nitrogenase, which has been highly conserved through evolution. Cloning and sequencing of one of the nitrogenase structural genes, nifH, has provided a large, rapidly expanding database of sequences from diverse terrestrial and aquatic environments. Comparison of nifH phylogenies to ribosomal RNA phylogenies from cultivated microorganisms shows little conclusive evidence of lateral gene transfer. Sequence diversity far outstrips representation by cultivated representatives. The phylogeny of nitrogenase includes branches that represent phylotypic groupings based on ribosomal RNA phylogeny, but also includes paralogous clades including the alternative, non-molybdenum, non-vanadium containing nitrogenases. Only a few alternative or archaeal nitrogenase sequences have as yet been obtained from the environment. Extensive analysis of the distribution of nifH phylotypes among habitats indicates that there are characteristic patterns of nitrogen fixing microorganisms in termite guts, sediment and soil environments, estuaries and salt marshes, and oligotrophic oceans. The distribution of nitrogen-fixing microorganisms, although not entirely dictated by the nitrogen availability in the environment, is non-random and can be predicted on the basis of habitat characteristics. The ability to assay for gene expression and investigate genome arrangements provides the promise of new tools for interrogating natural populations of diazotrophs. The broad analysis of nitrogenase genes provides a basis for developing molecular assays and bioinformatics approaches for the study of nitrogen fixation in the environment. [source]

Semantic Differences in Sifaka (Propithecus verreauxi) Alarm Calls: A Reflection of Genetic or Cultural Variants?

ETHOLOGY, Issue 9 2006
Claudia Fichtel
In this study, we compared the usage of alarm calls and anti-predator strategies between a captive and a wild lemur population. The wild lemur population was studied earlier in Western Madagascar (Fichtel & Kappeler 2002). The captive population was studied in outdoor enclosures of the Duke University Primate Center. Alarm calls and anti-predator behavior were elicited by conducting experiments with both vocal and visual dummies. We scored the subjects' immediate behavioral responses, including alarm calls, from video recordings made during the experiments. In principle, both populations have a mixed alarm call system with functionally referential alarm calls for aerial predators and general alarm calls for terrestrial and aerial predators and for situations associated with high arousal, such as group encounters. Although wild and captive sifakas exhibit the same alarm call system and use the same alarm call types, we discovered striking differences in the usage and perception of some of the alarm calls. We argue that these differences indicate either an evolutionary drift in the meaning of these calls or reflect cultural variation. The latter possibility is consistent with our understanding of the ontogeny of call usage and comprehension. [source]

Nest, but Not Egg, Fidelity in a Territorial Salamander

ETHOLOGY, Issue 9 2000
Megan G. Peterson
Egg recognition and subsequent egg brooding are costly forms of parental investment in many species of vertebrates. Life history factors, such as coloniality or risk of brood parasitism, may constrain egg recognition in vertebrates. Female red-backed salamanders (Plethodon cinereus) from my study site are territorial and do not share nest sites with other females. They are terrestrial and neither they nor their eggs are likely to be displaced by environmental factors such as flooding. I experimentally tested, in the laboratory, the hypothesis that female red-backed salamanders can discriminate between their own eggs and the eggs of unfamiliar females. Each female was allowed to move about a test chamber containing two clutches of eggs, one clutch with which it was found in the forest and one that had been found with a distant female. Most females remained with one clutch of eggs, which they brooded during the entire observation period. However, they did not significantly prefer to brood their own eggs over the eggs of another female. In a corollary field experiment, I tested whether brooding females that were displaced 1 m from their nest sites would return to their territories and commence brooding behaviour within 3 d. All 10 displaced females returned to their own nest within this time period and were found brooding their eggs. Because female red-backed salamanders at my study site do not tend to share nest sites with other females and because their eggs remain in stationary nests, selection may not have favoured egg recognition. However, the results suggest that female salamanders indirectly recognize their own eggs by actively recognizing their territorial nest sites. [source]

EVOLUTION OF SCAPULA SIZE AND SHAPE IN DIDELPHID MARSUPIALS (DIDELPHIMORPHIA: DIDELPHIDAE)

EVOLUTION, Issue 9 2009
Diego Astúa
The New World family Didelphidae, the basal lineage within marsupials, is commonly viewed as morphologically conservative, yet includes aquatic, terrestrial, scansorial, and arboreal species. Here, I quantitatively estimated the existing variability in size and shape of the Didelphidae scapula (1076 specimens from 56 species) using geometric morphometrics, and compared size and shape differences to evolutionary and ecologic distances. I found considerable variation in the scapula morphology, most of it related to size differences between species. This results in morphologic divergence between different locomotor habits in larger species (resulting from increased mechanical loads), but most smaller species present similarly shaped scapulae. The only exceptions are the water opossum and the short-tailed opossums, and the functional explanations for these differences remain unclear. Scapula size and shape were mapped onto a molecular phylogeny for 32 selected taxa and ancestral size and shapes were reconstructed using squared-changed parsimony. Results indicate that the Didelphidae evolved from a medium- to small-sized ancestor with a generalized scapula, slightly more similar to arboreal ones, but strikingly different from big-bodied present arboreal species, suggesting that the ancestral Didelphidae was a small scansorial animal with no particular adaptations for arboreal or terrestrial habits, and these specializations evolved only in larger-bodied clades. [source]

A new fossil species of Polypodium (Polypodiaceae) from the Oligocene of northern Bohemia (Czech Republic)

FEDDES REPERTORIUM, Issue 3-4 2001
Z. Kvacek
A new fossil representative of Polypodium L. emend. CHING (Polypodiaceae s.str.) was recovered in the Early Oligocene diatomite shales of the Ceske stredohori Mountains, North Bohemia (localities Bechlejovice, Holy Kluk hill). Polypodium radonii sp. nova is characterised on the basis of fragmentary fronds, which have simple pinnatifid laminas, entire pinnae, free, anadromously branched venation, solitary broadly elliptic superficial sori and monolete spores in situ of the Polypodiisporites bock-witzensis type. This terrestrial (? to epiphytic or epilithic) fern was associated with vegetation of subtropical Mixed Mesophytic (Holy Kluk) and warm temperate Deciduous Broad-leaved (Bechlejovice) forest types. Actual taxonomy of extant Polypodiaceae s.str. as well as the Tertiary records of this fern group within the Holarctis are reviewed. [source]

Nitrification in terrestrial hot springs of Iceland and Kamchatka

FEMS MICROBIOLOGY ECOLOGY, Issue 2 2008
Laila J. Reigstad
Abstract Archaea have been detected recently as a major and often dominant component of the microbial communities performing ammonia oxidation in terrestrial and marine environments. In a molecular survey of archaeal ammonia monooxygenase (AMO) genes in terrestrial hot springs of Iceland and Kamchatka, the amoA gene encoding the ,-subunit of AMO was detected in a total of 14 hot springs out of the 22 investigated. Most of these amoA -positive hot springs had temperatures between 82 and 97 °C and pH range between 2.5 and 7. In phylogenetic analyses, these amoA genes formed three independent lineages within the known sequence clusters of marine or soil origin. Furthermore, in situ gross nitrification rates in Icelandic hot springs were estimated by the pool dilution technique directly on site. At temperatures above 80 °C, between 56 and 159 ,mol NO3, L,1 mud per day was produced. Furthermore, addition of ammonium to the hot spring samples before incubation yielded a more than twofold higher potential nitrification rate, indicating that the process was limited by ammonia supply. Our data provide evidence for an active role of archaea in nitrification of hot springs in a wide range of pH values and at a high temperature. [source]

Tracing energy flow in stream food webs using stable isotopes of hydrogen

FRESHWATER BIOLOGY, Issue 5 2010
JACQUES C. FINLAY
Summary 1. Use of the natural ratios of carbon and nitrogen stable isotopes as tracers of trophic interactions has some clear advantages over alternative methods for food web analyses, yet is limited to situations where organic materials of interest have adequate isotopic separation between potential sources. This constrains the use of natural abundance stable isotope approaches to a subset of ecosystems with biogeochemical conditions favourable to source separation. 2. Recent studies suggest that stable hydrogen isotopes (,D) could provide a robust tracer to distinguish contributions of aquatic and terrestrial production in food webs, but variation in ,D of consumers and their organic food sources are poorly known. To explore the utility of the stable hydrogen isotope approach, we examined variation in ,D in stream food webs in a forested catchment where variation in ,13C has been described previously. 3. Although algal ,D varied by taxa and, to a small degree, between sites, we found consistent and clear separation (by an average of 67,) from terrestrial carbon sources. Environmental conditions known to affect algal ,13C, such as water velocity and stream productivity did not greatly influence algal ,D, and there was no evidence of seasonal variation. In contrast, algal ,13C was strongly affected by environmental factors both within and across sites, was seasonally variable at all sites, and partially overlapped with terrestrial ,13C in all streams with catchment areas larger than 10 km2. 4. While knowledge of isotopic exchange with water and trophic fractionation of ,D for aquatic consumers is limited, consistent source separation in streams suggests that ,D may provide a complementary food web tracer to ,13C in aquatic food webs. Lack of significant seasonal or spatial variation in ,D is a distinct advantage over ,13C for applications in many aquatic ecosystems. [source]

Management options for river conservation planning: condition and conservation re-visited

FRESHWATER BIOLOGY, Issue 5 2007
SIMON LINKE
Summary 1. Systematic conservation planning is a process widely used in terrestrial and marine environments. A principal goal is to establish a network of protected areas representing the full variety of species or ecosystems. We suggest considering three key attributes of a catchment when planning for aquatic conservation: irreplaceability, condition and vulnerability. 2. Based on observed and modelled distributions of 367 invertebrates in the Australian state of Victoria, conservation value was measured by calculating an irreplaceability coefficient for 1854 subcatchments. Irreplaceability indicates the likelihood of any subcatchment being needed to achieve conservation targets. We estimated it with a bootstrapped heuristic reserve design algorithm, which included upstream,downstream connectivity rules. The selection metric within the algorithm was total summed rarity, corrected for protected area. 3. Condition was estimated using a stressor gradient approach in which two classes of geographical information system Layers were summarised using principal components analysis. The first class was disturbance measures such as nutrient and sediment budgets, salinisation and weed cover. The second class was land use layers, including classes of forestry, agricultural and urban use. The main gradient, explaining 56% of the variation, could be characterised as agricultural disturbance. Seventy-five per cent of the study area was classified as disturbed. 4. Our definition of vulnerability was the likelihood of a catchment being exposed to a land use that degrades its condition. This was estimated by comparing land capability and current land use. If land was capable of supporting a land use that would have a more degrading effect on a river than its current tenure, it was classified vulnerable (66% of the study area). 79% of catchments contained more then 50% vulnerable land. 5. When integrating the three measures, two major groups of catchments requiring urgent conservation measures were identified. Seven per cent of catchments were highly irreplaceable, highly vulnerable but in degraded condition. These catchments were flagged for restoration. While most highly irreplaceable catchments in good condition were already protected, 2.5% of catchments in this category are on vulnerable land. These are priority areas for assigning river reserves. [source]

Essential fatty acids and phosphorus in seston from lakes with contrasting terrestrial dissolved organic carbon content

FRESHWATER BIOLOGY, Issue 1 2007
KELLY GUTSEIT
Summary 1. It is often assumed that lakes highly influenced by terrestrial organic matter (TOM) have low zooplankton food quality because of elemental and/or biochemical deficiencies of the major particulate organic carbon pools. We used the biochemical [polyunsaturated fatty acids, especially eicosapentaenoic acid (EPA) , 20:5,3] and elemental (C : P ratio) composition of particulate matter (PM) as qualitative measures of potential zooplankton food in two categories of lakes of similar primary productivity, but with contrasting TOM influence (clear water versus humic lakes). 2. C : P ratios (atomic ratio) in PM were similar between lake categories and were above 400. The concentration (,g L,1) and relative content (,g mg C,1) of EPA, as well as the particulate organic carbon concentration, were higher in the humic lakes than in the clear-water lakes. 3. Our results show high fatty acid quality of PM in the humic lakes. The differences in the biochemical quality of the potential zooplankton food between lake categories can be attributed to the differences in their phytoplankton communities. 4. High biochemical quality of the food can result in high efficiency of energy transfer in the food chain and stimulate production at higher trophic levels, assuming that zooplankton are able to ingest and digest the resource available. [source]

Riverine landscapes: taking landscape ecology into the water

FRESHWATER BIOLOGY, Issue 4 2002
JOHN A. WIENS
1.,Landscape ecology deals with the influence of spatial pattern on ecological processes. It considers the ecological consequences of where things are located in space, where they are relative to other things, and how these relationships and their consequences are contingent on the characteristics of the surrounding landscape mosaic at multiple scales in time and space. Traditionally, landscape ecologists have focused their attention on terrestrial ecosystems, and rivers and streams have been considered either as elements of landscape mosaics or as units that are linked to the terrestrial landscape by flows across boundaries or ecotones. Less often, the heterogeneity that exists within a river or stream has been viewed as a `riverscape' in its own right. 2.,Landscape ecology can be unified about six central themes: (1) patches differ in quality (2) patch boundaries affect flows, (3) patch context matters, (4) connectivity is critical, (5) organisms are important, and (6) the importance of scale. Although riverine systems differ from terrestrial systems by virtue of the strong physical force of hydrology and the inherent connectivity provided by water flow, all of these themes apply equally to aquatic and terrestrial ecosystems, and to the linkages between the two. 3.,Landscape ecology therefore has important insights to offer to the study of riverine ecosystems, but these systems may also provide excellent opportunities for developing and testing landscape ecological theory. The principles and approaches of landscape ecology should be extended to include freshwater systems; it is time to take the `land' out of landscape ecology. [source]

Dispersal of adult aquatic Chironomidae (Diptera) in agricultural landscapes

FRESHWATER BIOLOGY, Issue 3 2000
Yannick R. Delettre
SUMMARY 1This study investigates the possible influence of terrestrial landscape structure on the spatial distribution of adult Chironomidae emerging from water bodies in three agricultural areas, each with hedgerow networks, in Brittany (France). 2Using spatially explicit data from 128 yellow pan traps set in pairs at the bottom of hedges throughout the three study areas, we show that landscape structure and heterogeneity must be considered at two different spatial scales. 3At a global scale, distance to water bodies was the main factor explaining the spatial distribution of adult chironomids: both species richness and abundance changed beyond a critical distance to the stream, resulting in different species assemblages of flying insects. 4At a local scale, the abundance of species and individuals at rest in hedges changed with the quality of the hedge (mainly determined by canopy width and cover of the different vegetation layers). 5The density of the hedgerow network, and landscape openness, both influenced the dispersal of chironomid species from water bodies. 6This study, which provides the first estimate of the dispersal capabilities of chironomids in particular landscapes, suggests that the terrestrial environment is an essential component of population dynamics and community structure in aquatic Chironomidae. [source]

The biology and ecology of lotic microturbellarians

FRESHWATER BIOLOGY, Issue 1 2000
Jurek Kolasa
Summary 1More than 200 known species of Microturbellaria occur in running waters world-wide but discovery of many more is likely. Their population density varies greatly as a function of substratum, productivity, phenology and hydrology. The density may exceed 7 000 individuals m -2. The number of species in a single small sample may reach 20. 2Many species appear to have microhabitat or stream section specialisation but community patterns are obscured to a certain extent by common and eurytopic species. The specialisation is particularly evident in the smaller, lower-order streams. 3Some of this habitat specialisation is attributable to the ecological origin of species that may include terrestrial, underground, marine and lentic species pools. 4Feeding habits of Microturbellaria range from omnivory to specialised predation. 5Quantitative field studies require extraction and examination of live specimens from samples. Such samples pose transportation and storage problems and must be processed within hours of collection. 6Taxonomy is well resolved for the Northern Hemisphere but is likely to be a major challenge in other parts of the world. In any region, however, new species may demand caution while using current keys to their identification. [source]

Increasing accuracy of causal inference in experimental analyses of biodiversity

FUNCTIONAL ECOLOGY, Issue 6 2004
L. BENEDETTI-CECCHI
Summary 1Manipulative experiments are often used to identify causal linkages between biodiversity and productivity in terrestrial and aquatic habitats. 2Most studies have identified an effect of biodiversity, but their interpretation has stimulated considerable debate. The main difficulties lie in separating the effect of species richness from those due to changes in identity and relative density of species. 3Various experimental designs have been adopted to circumvent problems in the analysis of biodiversity. Here I show that these designs may not be able to maintain the probability of type I errors at the nominal level (, = 0·05) under a true null hypothesis of no effect of species richness, in the presence of effects of density and identity of species. 4Alternative designs have been proposed to discriminate unambiguously the effects of identity and density of species from those due to number of species. Simulations show that the proposed experiments may have increased capacity to control for type I errors when effects of density and identity of species are also present. These designs have enough flexibility to be useful in the experimental analysis of biodiversity in various assemblages and under a wide range of environmental conditions. [source]

Stratigraphic investigations at Los Buchillones, a coastal Taino site in north-central Cuba

GEOARCHAEOLOGY: AN INTERNATIONAL JOURNAL, Issue 5 2006
Matthew C. Peros
The authors present stratigraphic data from Los Buchillones, a now submerged Taino village on the north coast of central Cuba that was occupied from some time prior to A.D. 1220 until 1640 or later. Los Buchillones is one of the best-preserved sites in the Caribbean, with material culture remains that include palm thatch and wooden structural elements from some of the more than 40 collapsed structures. The purpose of this study was to investigate the environment and site-formation processes of the Taino settlement. Sediment cores were sampled from the site and its vicinity to permit integration of the geological and archaeological stratigraphies. The cores were analyzed for color, texture, mollusk content, elemental geochemistry, and mineralogy. The results of the stratigraphic work are consistent with regional sealevel data that shows relative sea level has risen gradually during the late Holocene, but has remained relatively stable since the time the Taino first occupied Los Buchillones. Of the two structures partially cleared, at least one appears to have been built over the water, supported on pilings. Site selection is likely to have resulted from a consideration of environmental factors, such as access to marine, terrestrial, and lagoonal resources, and proximity to freshwater springs. © 2006 Wiley Periodicals, Inc. [source]