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Temperature Adaptation (temperature + adaptation)
Selected AbstractsTemperature adaptation in a geographically widespread zooplankter, Daphnia magnaJOURNAL OF EVOLUTIONARY BIOLOGY, Issue 3 2000Mitchell Evidence for temperature adaptation in Daphnia magna was inferred from variation in the shape of temperature reaction norms for somatic growth rate, a fitness-related trait. Ex-ephippial clones from eight populations across Europe were grown under standardized conditions after preacclimation at five temperatures (17,29 °C). Significant variation for grand mean growth rates occurred both within populations (among clones) and between populations. Genetic variation for reaction norm shape was found within populations, with temperature-dependent trade-offs in clone relative fitness. However, the population average responses to temperature were similar, following approximately parallel reaction norms. The among-population variation is not evidence for temperature adaptation. Lack of temperature adaptation at the population level may be a feature of intermittent populations where environmentally terminated diapause can entrain the planktonic stage of the life-history within a similar range of temperatures. [source] Temperature-dependent changes in the soil bacterial community in limed and unlimed soilFEMS MICROBIOLOGY ECOLOGY, Issue 1 2003Marie Pettersson Abstract A humus soil with a pH(H2O) of 4.9 was limed to a pH of 7.5 and was incubated together with samples from unlimed and field limed (pH 6.1) soils at 5, 20 and 30°C for up to 80 days. The changes in the phospholipid fatty acid (PLFA) pattern were most rapid for the bacterial community of the soil incubated at 30°C, while no changes were found in the soil incubated at 5°C. The response of the community activity to temperature was measured using the thymidine incorporation method on bacteria extracted from the soil. The bacterial community in soil incubated at 30°C became more adapted to high temperature than that in soil samples incubated at 5°C. When soil samples incubated at 30°C and 20°C were returned to 5°C for 35 days, only small changes in the PLFA pattern were found. No significant shift in community temperature adaptation was found. Thus, higher temperatures (with higher turnover) led to higher rates of change in both the PLFA pattern and the activity response to temperature, compared with lower temperatures. No effect of liming as a way of increasing substrate availability and turnover on the rate of change was observed. Changes in the PLFA pattern appeared sooner than changes in the activity response to temperature, indicating that changes in the PLFA pattern were mainly due to phenotypic acclimation and not to species replacement. [source] Temperature adaptation in a geographically widespread zooplankter, Daphnia magnaJOURNAL OF EVOLUTIONARY BIOLOGY, Issue 3 2000Mitchell Evidence for temperature adaptation in Daphnia magna was inferred from variation in the shape of temperature reaction norms for somatic growth rate, a fitness-related trait. Ex-ephippial clones from eight populations across Europe were grown under standardized conditions after preacclimation at five temperatures (17,29 °C). Significant variation for grand mean growth rates occurred both within populations (among clones) and between populations. Genetic variation for reaction norm shape was found within populations, with temperature-dependent trade-offs in clone relative fitness. However, the population average responses to temperature were similar, following approximately parallel reaction norms. The among-population variation is not evidence for temperature adaptation. Lack of temperature adaptation at the population level may be a feature of intermittent populations where environmentally terminated diapause can entrain the planktonic stage of the life-history within a similar range of temperatures. [source] Genital herpes due to acyclovir-sensitive herpes simplex virus caused secondary and recurrent herpetic whitlows due to thymidine kinase-deficient/temperature-sensitive virusJOURNAL OF MEDICAL VIROLOGY, Issue 11 2007Yuka Shimada Abstract Herpes simplex virus (HSV)-2 caused a genital ulcer in a 40-year-old allogenic stem cell recipient, and a secondary herpetic whitlow appeared during 2 months of acyclovir (ACV) therapy. Both genital ulcer, and whitlow were cured 3 months later, but 6 months after recovery the whitlow alone recurred. DNA of the genital, first, and recurrent whitlow isolates showed similar endonuclease digestion fragment profiles. The genital virus was ACV-sensitive, and the two whitlow isolates were ACV-resistant/thymidine kinase (TK)-deficient. The TK gene of the whitlow isolates had the same frame shift from the 274th amino acid and termination at the 347th amino acid due to the deletion of a cytosine at the 819th nucleotide. Because the temperature of the thumb is 33/34°C or lower, the temperature sensitivity of the isolates were compared, and both whitlow isolates were significantly more temperature-sensitive (ts) at 39°C than the genital isolate. The two whitlow isolates showed cutaneous pathogenicity in mouse ear pinna but not midflank, while the genital isolate was pathogenic at both sites, suggesting that temperature adaptation was an important element of pathogenicity in the whitlow. The virus populations of isolates of the genital, and first whitlow were examined by 31, and 82 clones, respectively, and the clones from genital, and whitlow isolates were ACV-sensitive, and -resistant, respectively, showing their homogeneity. The acyclovir-sensitive genital lesion had spread as a TK-deficient/ts herpetic whitlow during ACV treatment, and an apparently TK-deficient virus adapted to the local temperature might have caused the whitlow recurrence. J. Med. Virol. 79:1731,1740, 2007. © 2007 Wiley-Liss, Inc. [source] A gel-free quantitative proteomics approach to investigate temperature adaptation of the food-borne pathogen Cronobacter turicensis 3032PROTEINS: STRUCTURE, FUNCTION AND BIOINFORMATICS, Issue 18 2010Paula Carranza Abstract The opportunistic food-borne pathogen Cronobacter sp. causes rare but significant illness in neonates and is capable to grow at a remarkably wide range of temperatures from 5.5 to 47°C. A gel-free quantitative proteomics approach was employed to investigate the molecular basis of the Cronobacter sp. adaptation to heat and cold-stress. To this end the model strain Cronobacter turicensis 3032 was grown at 25, 37, 44, and 47°C, and whole-cell and secreted proteins were iTRAQ-labelled and identified/quantified by 2-D-LC-MALDI-TOF/TOF-MS. While 44°C caused only minor changes in C. turicensis growth rate and protein profile, 47°C affected the expression of about 20% of all 891 identified proteins and resulted in a reduced growth rate and rendered the strain non-motile and filamentous. Among the heat-induced proteins were heat shock factors, transcriptional and translational proteins, whereas proteins affecting cellular morphology, proteins involved in motility, central metabolism and energy production were down-regulated. Notably, numerous potential virulence factors were found to be up-regulated at higher temperatures, suggesting an elevated pathogenic potential of Cronobacter sp. under these growth conditions. Significant alterations in the protein expression profile and growth rate of C. turicensis exposed to 25°C indicate that at this temperature the organism is cold-stressed. Up-regulated gene products comprised cold-shock, DNA-binding and ribosomal proteins, factors that support protein folding and proteins opposing cold-induced decrease in membrane fluidity, whereas down-regulated proteins were mainly involved in central metabolism. [source] Structure of uracil-DNA N -glycosylase (UNG) from Vibrio cholerae: mapping temperature adaptation through structural and mutational analysisACTA CRYSTALLOGRAPHICA SECTION F (ELECTRONIC), Issue 2 2010Inger Lin Uttakleiv Raeder The crystal structure of Vibrio cholerae uracil-DNA N -glycosylase (vcUNG) has been determined to 1.5,Å resolution. Based on this structure, a homology model of Aliivibrio salmonicida uracil-DNA N -glycosylase (asUNG) was built. A previous study demonstrated that asUNG possesses typical cold-adapted features compared with vcUNG, such as a higher catalytic efficiency owing to increased substrate affinity. Specific amino-acid substitutions in asUNG were suggested to be responsible for the increased substrate affinity and the elevated catalytic efficiency by increasing the positive surface charge in the DNA-binding region. The temperature adaptation of these enzymes has been investigated using structural and mutational analyses, in which mutations of vcUNG demonstrated an increased substrate affinity that more resembled that of asUNG. Visualization of surface potentials revealed a more positive potential for asUNG compared with vcUNG; a modelled double mutant of vcUNG had a potential around the substrate-binding region that was more like that of asUNG, thus rationalizing the results obtained from the kinetic studies. [source] DATE analysis: A general theory of biological change applied to microarray dataBIOTECHNOLOGY PROGRESS, Issue 5 2009David Rasnick Abstract In contrast to conventional data mining, which searches for specific subsets of genes (extensive variables) to correlate with specific phenotypes, DATE analysis correlates intensive state variables calculated from the same datasets. At the heart of DATE analysis are two biological equations of state not dependent on genetic pathways. This result distinguishes DATE analysis from other bioinformatics approaches. The dimensionless state variable F quantifies the relative overall cellular activity of test cells compared to well-chosen reference cells. The variable ,i is the fold-change in the expression of the ith gene of test cells relative to reference. It is the fraction , of the genome undergoing differential expression,not the magnitude ,,that controls biological change. The state variable , is equivalent to the control strength of metabolic control analysis. For tractability, DATE analysis assumes a linear system of enzyme-connected networks and exploits the small average contribution of each cellular component. This approach was validated by reproducible values of the state variables F, RNA index, and , calculated from random subsets of transcript microarray data. Using published microarray data, F, RNA index, and , were correlated with: (1) the blood-feeding cycle of the malaria parasite, (2) embryonic development of the fruit fly, (3) temperature adaptation of Killifish, (4) exponential growth of cultured S. pneumoniae, and (5) human cancers. DATE analysis was applied to aCGH data from the great apes. A good example of the power of DATE analysis is its application to genomically unstable cancers, which have been refractory to data mining strategies. © 2009 American Institute of Chemical Engineers Biotechnol. Prog., 2009 [source] Butterfly life history and temperature adaptations; dry open habitats select for increased fecundity and longevityJOURNAL OF ANIMAL ECOLOGY, Issue 1 2005BENGT KARLSSON Summary 1Evidence suggests that changes of temperature-related performance curves can trigger a selective response in life-history traits. Hence, it should be expected that insects adapted to different temperature regimes should exhibit optimal performance at the temperature to which they are adapted. 2To test this idea we investigated how fecundity and longevity are influenced by ambient temperatures in a set of satyrine butterflies adapted to live in dry open landscapes or in closed forest landscapes, respectively, by keeping egg-laying adult females at five different constant temperatures ranging between 20 and 40 °C. 3We studied four species, two of which are confined to dry and hot open habitats, namely the grayling (Hipparchia semele) and the small heath (Coenonympha pamphilus), and two of which are shade dwelling, namely the ringlet (Aphantopus hyperantus) and the speckled wood butterfly (Pararge aegeria). 4As predicted, the results showed that lifetime fecundity exhibited bell-shaped curves in relation to temperature with the open landscape group peaking at a higher temperature, 30 °C, compared with the shade-dwelling group that peaked at 25 °C. Longevity decreased with increasing temperatures among all species, but the open landscape living species survived better at higher temperatures. Moreover, although the magnitude of reproductive effort measured as lifetime egg mass did not differ between the two ecological groups, lifetime fecundity did with open landscape species laying more and smaller eggs than the shade-dwelling species. 5This difference in life-history character traits suggests either that dry and relatively warm open habitats open life-history opportunities in terms of higher fecundity and longevity that remain closed to butterflies adapted to cooler temperatures, or that life in dry open habitats actively selects for higher fecundity and survival as a result of increased offspring mortality. [source] | |||||||||||||