Taxonomic Groups (taxonomic + groups)

Distribution by Scientific Domains
Distribution within Life Sciences

Kinds of Taxonomic Groups

  • different taxonomic groups
  • other taxonomic groups
  • several taxonomic groups


  • Selected Abstracts


    Body size changes in ground beetle assemblages , a reanalysis of Braun et al. (2004)'s data

    ECOLOGICAL ENTOMOLOGY, Issue 5 2006
    GÁBOR L. LÖVEI
    Abstract 1.,Data in Braun et al.'s (2004) recent paper on size trends in ground beetles (Carabidae) are re-analysed, after re-classifying the species according to feeding categories. 2.,When ground beetles are classified as predatory species, mixed feeders or herbivores, and evaluated separately, the size trends indicate group-specific differences. Most of these do not support the efficiency-specialisation hypothesis. 3.,Taxonomic groups rarely fit into one ecological category and ecological analyses should explicitly consider this hurdle. [source]


    From Red Lists to Species of Conservation Concern

    CONSERVATION BIOLOGY, Issue 6 2004
    VERENA KELLER
    aves; conservación de especies; listas rojas; prioridades de conservación; Suiza Abstract:,National red lists of threatened animal and plant species prepared according to the criteria of the World Conservation Union (IUCN) adequately reflect the extinction risk of species within a country but cannot be used directly to set conservation priorities. In particular, the significance of national populations for the conservation of the species as a whole is not taken into account. We present a procedure that can be used to assess national responsibility based on the national red-list status of a species, the international importance of the national population, and the species' "historical rarity" status. We distinguished five responsibility classes for breeding birds: B1, threatened species with internationally important populations in Switzerland; B2, threatened species with internationally less important populations; B3, nonthreatened species with internationally important populations; B4, nonthreatened species with internationally less important populations; and B5, species that have never been common in Switzerland. Two responsibility classes were distinguished for birds occurring in Switzerland as visitors: G1, species with large concentrations in Switzerland and an unfavorable conservation status in Europe, and G2, species with large concentrations in Switzerland and a favorable conservation status in Europe. Two additional classes (G3 and G4) for visiting species occurring in internationally less important numbers are possible but were not analyzed in detail. Responsibility classes B1, B2, B3, G1, and G2 were defined as species of national conservation concern. We developed the method for birds in Switzerland, but it can be used in other countries and for other taxonomic groups as well. It is particularly suitable where national red lists are established according to IUCN guidelines. Resumen:,Las listas rojas nacionales de especies de animales y plantas amenazadas que siguen los criterios de la World Conservation Union (IUCN) reflejan adecuadamente el riesgo de extinción de especies en un país pero no pueden ser utilizadas directamente para definir prioridades de conservación. En particular, no se toma en cuenta el significado de poblaciones nacionales para la conservación de especies como tales. Presentamos un procedimiento que se puede utilizar para evaluar la responsabilidad nacional con base en el estatus de lista roja de una especie en un país, la importancia internacional de la población nacional y el estatus de "rareza histórica" de la especie. Distinguimos cinco clases de responsabilidad para aves residentes: B1, especies amenazadas con poblaciones internacionalmente importantes en Suiza; B2, especies amenazadas con poblaciones internacionalmente menos importantes; B3, especies no amenazadas con poblaciones internacionalmente importantes; B4, especies no amenazadas con poblaciones internacionalmente menos importantes; y B5, especies que nunca han sido comunes en Suiza. Se distinguieron dos clases de responsabilidad para aves que ocurren como visitantes en Suiza: G1, especies con grandes concentraciones en Suiza y un estatus de conservación desfavorable en Europa y G2, especies con grandes concentraciones en Suiza y un estatus de conservación favorable en Europa. Son posibles dos clases más, (G3 y G4) para especies visitantes que ocurren en números menos importantes internacionalmente, pero no fueron analizados en detalle. Las clases de responsabilidad B1, B2, B3, G1 y G2 fueron definidas como especies de interés nacional para la conservación. Desarrollamos el método para aves en Suiza, pero también se puede utilizar en otros países y con otros grupos taxonómicos, Es particularmente adecuado donde las listas rojas nacionales se establecen de acuerdo con lineamientos de IUCN. [source]


    Biogeographic Crossroads as Priority Areas for Biodiversity Conservation

    CONSERVATION BIOLOGY, Issue 6 2002
    Sacha Spector
    I suggest that targeting the regions where biogeographic assemblages intersect,"biogeographic crossroads",is a strategy that may achieve significant conservation economy by focusing on areas that satisfy many conservation criteria. I used a combination of data on Scarabaeine beetles in Bolivia and on other taxa and locations from the literature to consider the short- and long-term benefits of conserving these biogeographic crossroads. Biogeographic crossroads are areas of high species richness and beta diversity, often across many taxonomic groups. They are also regions where representativeness can be achieved with relative efficiency. Recent evidence that ecotones may be loci of evolution suggests that evolutionary processes such as speciation and coevolution may be conserved at biogeographic crossroads. Biogeographic crossroads appear to be areas of high conservation priority and opportunity in both the short and long term and require increased attention in the process of setting conservation priorities. Resumen: Las amenazas a la biodiversidad rebasan los recursos de la comunidad conservacionista y requieren de una cuidadosa priorización de las acciones de conservación. Sugiero que enfocar en las regiones donde intersectan ensambles biogeográficos,"intersecciones biogeográficas", es una estrategia que puede lograr una economía significativa de los esfuerzos de conservación al atender áreas que satisfacen muchos criterios de conservación. Utilicé una combinación de datos de escarabajos Scarabaeine de Bolivia y de otros taxones y localidades de la literatura para considerar los beneficios a corto y largo plazo de conservar estas intersecciones biogeográficas. Las intersecciones biogeográficas son áreas de alta riqueza de especies y de diversidad beta, y probablemente éste sea el caso de muchos grupos taxonómicos. También son regiones en las que se puede alcanzar representatividad con relativa eficiencia. Evidencia reciente de que los ecotonos pueden ser sitios de evolución sugiere que los procesos evolutivos tales como la especiación y coevolución pueden ser conservados en intersecciones biogeográficas. Las intersecciones biogeográficas parecen ser áreas de alta prioridad y oportunidad de conservación tanto a corto como a largo plazo y requieren mayor atención en el proceso de definición de prioridades de conservación. [source]


    Effects of Economic Prosperity on Numbers of Threatened Species

    CONSERVATION BIOLOGY, Issue 4 2001
    Robin Naidoo
    We corrected for factors that might otherwise confound such a relationship. Our study was motivated by the continuing debate over the relationship between environmental degradation and per-capita income. Proponents of the environmental Kuznets-curve hypothesis argue that although environmental degradation may increase initially, increases in per-capita income will eventually result in greater environmental quality. Theoretical objections and the lack of widespread empirical evidence recently have thrown doubt on the existence of such a pattern. Treating threat to biodiversity as one potential indicator of environmental degradation, we divided threatened species into seven taxonomic groups ( plants, mammals, birds, amphibians, reptiles, fishes, and invertebrates) and analyzed each group separately. Count-data regression analysis indicated that the number of threatened species was related to per-capita gross national product in five of seven taxonomic groups. Birds were the only taxonomic group in which numbers of threatened species decreased throughout the range of developed countries' per-capita gross national product. Plants, amphibians, reptiles, and invertebrates showed increasing numbers of threatened species throughout this same range. If these relationships hold, increasing numbers of species from several taxonomic groups are likely to be threatened with extinction as countries increase in prosperity. A key challenge is to understand the interactions among consumer preferences, biology, and institutions that lead to the relationship observed for birds and to see whether this knowledge can be applied to conservation of other taxa. Resumen: Utilizamos datos de más de 100 países para investigar la relación entre números de especies amenazadas y el producto interno bruto per cápita. Hicimos ajustes para factores que pudieran confundir tal relación. Nuestro estudio fue motivado por el continuo debate sobre la relación entre la degradación ambiental y el ingreso per cápita. Proponentes de la hipótesis de la curva ambiental de Kuznets argumentan que, aunque la degradación ambiental puede aumentar inicialmente, el incremento en el ingreso per cápita eventualmente resultará en una mejor calidad ambiental. Recientemente, objeciones teóricas y la carencia de evidencia empírica generalizada hacen dudar de la existencia de ese patrón. Tratando la amenaza a la biodiversidad como un potencial indicador de la degradación ambiental, dividimos a las especies amenazadas en siete grupos taxonómicos (plantas, mamíferos, aves, anfibios, reptiles, peces e invertebrados) y analizamos cada uno por separado. El análisis de regresión de los datos de conteo indicó que el número de especies amenazadas se relacionó con el producto interno bruto per cápita en 5 de los 7 grupos taxonómicos. Las aves fueron el único grupo en el que el número de especies amenazadas decreció a lo largo del rango del producto interno bruto per cápita de los países desarrollados. Las plantas, anfibios, reptiles e invertebrados mostraron un incremento en el número de especies amenazadas en este mismo rango. Si estas relaciones persisten, es posible que aumente el número de especies, de varios grupos taxonómicos, amenazadas de extinción a medida que los países incrementen su prosperidad. Constituye un reto clave entender las interacciones entre la preferencia de los consumidores y los factores biológicos e institucionales que conducen a la relación observada en las aves, y ver si este conocimiento puede aplicarse en la conservación de otros taxones. [source]


    Does habitat use explain large scale species richness patterns of aquatic beetles in Europe?

    ECOGRAPHY, Issue 2 2003
    Ignacio Ribera
    Regularities in species richness are widely observed but controversy continues over its mechanistic explanation. Because richness patterns are usually a compound measure derived from taxonomically diverse species with different ecological requirements, these analyses may confound diverse causes of species numbers. Here we investigate species richness in the aquatic beetle fauna of Europe, separating major taxonomic groups and two major ecological types, species occurring in standing and running water bodies. We collated species distributions for 800+ species of water beetles in 15 regions across western Europe. Species number in any of these regions was related to three variables: total area size, geographic connectedness of the area, and latitude. Pooled species numbers were accurately predicted, but correlations were different for species associated with either running or standing water. The former were mostly correlated with latitude, while the latter were only correlated with the measure of connectedness or with area size. These differences were generally also observed in each of the four phylogenetically independent lineages of aquatic Coleoptera when analysed separately. We propose that effects of habitat, in this case possibly mediated by different long term persistence of running and standing water bodies, impose constraints at the population or local level which, if effective over larger temporal and spatial scales, determine global patterns of species richness. [source]


    Allometric scaling of maximum population density: a common rule for marine phytoplankton and terrestrial plants

    ECOLOGY LETTERS, Issue 5 2002
    Andrea Belgrano
    A primary goal of macroecology is to identify principles that apply across varied ecosystems and taxonomic groups. Here we show that the allometric relationship observed between maximum abundance and body size for terrestrial plants can be extended to predict maximum population densities of marine phytoplankton. These results imply that the abundance of primary producers is similarly constrained in terrestrial and marine systems by rates of energy supply as dictated by a common allometric scaling law. They also highlight the existence of general mechanisms linking rates of individual metabolism to emergent properties of ecosystems. [source]


    Dynamics of marine bacterial and phytoplankton populations using multiplex liquid bead array technology

    ENVIRONMENTAL MICROBIOLOGY, Issue 4 2010
    Xavier Mayali
    Summary Heterotrophic bacteria and phytoplankton dominate the biomass and play major roles in the biogeochemical cycles of the surface ocean. Here, we designed and tested a fast, high-throughput and multiplexed hybridization-based assay to detect populations of marine heterotrophic bacteria and phytoplankton based on their small subunit ribosomal DNA sequences. The assay is based on established liquid bead array technology, an approach that is gaining acceptance in biomedical research but remains underutilized in ecology. End-labelled PCR products are hybridized to taxon-specific oligonucleotide probes attached to fluorescently coded beads followed by flow cytometric detection. We used ribosomal DNA environmental clone libraries (a total of 450 clones) and cultured isolates to design and test 26 bacterial and 10 eukaryotic probes specific to various ribotypes and genera of heterotrophic bacteria and eukaryotic phytoplankton. Pure environmental clones or cultures were used as controls and demonstrated specificity of the probes to their target taxa. The quantitative nature of the assay was demonstrated by a significant relationship between the number of target molecules and fluorescence signal. Clone library sequencing and bead array fluorescence from the same sample provided consistent results. We then applied the assay to a 37-day time series of coastal surface seawater samples from the Southern California Bight to examine the temporal dynamics of microbial communities on the scale of days to weeks. As expected, several bacterial phylotypes were positively correlated with total bacterial abundances and chlorophyll a concentrations, but others were negatively correlated. Bacterial taxa belonging to the same broad taxonomic groups did not necessarily correlate with one another, confirming recent results suggesting that inferring ecological role from broad taxonomic identity may not always be accurate. [source]


    Hypolithic community shifts occur as a result of liquid water availability along environmental gradients in China's hot and cold hyperarid deserts

    ENVIRONMENTAL MICROBIOLOGY, Issue 2 2007
    Stephen B. Pointing
    Summary Hypolithic cyanobacterial communities occur in hot and cold hyperarid environments but the physical factors determining their diversity are not well understood. Here we report hypolithic diversity and colonization of a common quartz substrate at several hyperarid locations in the ancient deserts of north-western China, that experience varying mean annual temperature, rainfall and concomitant availability of liquid water in soil. Microscopy and enrichment culture resulted only in Chroococcidiopsis morphotypes which were ubiquitous, but community phylogenetic analysis revealed considerable cyanobacterial and heterotrophic bacterial diversity. Species Richness and Shannon's Diversity Index displayed a significant positive linear correlation with availability of liquid water but not temperature or rainfall alone. Several taxonomic groups occurred only in specific climatically defined locations, while for Chroococcidiopsis, Deinococcus and Phormidium location specific lineages within these genera were also evident. Multivariate analysis was used to illustrate pronounced community shifts due to liquid water availability, although these did not significantly affect the predicted functional relationships within any given assemblage in either hot or cold, wet or dry hyperarid deserts. This study clearly demonstrates that availability of liquid water, rather than temperature or rainfall per se is the key determinant of hypolithic diversity in hyperarid locations, and furthermore that functionally similar yet taxonomically distinct communities occur, characterized by the presence of taxa that are specific to defined levels of aridity. [source]


    Influence of isolation on the recovery of pond mesocosms from the application of an insecticide.

    ENVIRONMENTAL TOXICOLOGY & CHEMISTRY, Issue 6 2007

    Abstract The immediate response and recovery of the macrobenthic communities of nonisolated and isolated freshwater outdoor 9 m3 mesocosms following an acute stress caused by the addition of deltamethrin were studied over a 14-month period. To discriminate between internal and external recovery mechanisms, half of the treated ponds were covered by 1-mm mesh lids that restricted aerial recolonization. Both structural (abundance of the different taxonomic groups) and functional (litter breakdown) parameters were monitored. Insects were broadly reduced in numbers by deltamethrin addition. In general, noninsect groups were not affected or increased in abundance in deltamethrin-treated ponds, probably because of relative insensitivity to deltamethrin, reduced predation, and lower competition for food. No major change in litter breakdown rates were seen, probably because of functional redundancy among the macrobenthic community. Chironominae larvae recovered in open, treated mesocosms 62 d after deltamethrin addition and most insect groups recovered 84 d after the treatment date. However, the presence of lids significantly reduced insect recovery rate, suggesting that it largely depends on the immigration of winged forms (i.e., external recovery) from surrounding non- or less affected systems. These results indicate that the recovery time of macrobenthic communities in an affected natural pond would depend on spatial characteristics of the landscape and also the season that exposure occurs. Isolated ecosystems would display posttreatment insect recovery dynamics very different from highly connected ones, evolving toward alternate pseudoequilibrium states, possibly with lower biodiversity but with preserved functionality. Consequences for higher tier risk assessment of pesticides are discussed. [source]


    EMPIRICAL EVIDENCE FOR AN OPTIMAL BODY SIZE IN SNAKES

    EVOLUTION, Issue 2 2003
    Scott M. Boback
    Abstract The concept of optimal size has been invoked to explain patterns in body size of terrestrial mammals. However, the generality of this phenomenon has not been tested with similarly complete data from other taxonomic groups. In this study we describe three statistical patterns of body size in snakes, all of which indicate an optimal length of 1.0 m. First, a distribution of largest body lengths of 618 snake species had a single mode at 1.0 m. Second, we found a positive relationship between the size of the largest member of an island snake assemblage and island area and a negative relationship between the size of the smallest member of an island snake assemblage and island area. Best-fit lines through these data cross at a point corresponding to 1.0 m in body length, the presumed optimal size for a one-species island. Third, mainland snake species smaller than 1.0 m become larger on islands whereas those larger than 1.0 m become smaller on islands. The observation that all three analyses converge on a common body size is concordant with patterns observed in mammals and partial analyses of four other disparate animal clades. Because snakes differ so strikingly from mammals (ectotherms, gape-limited predators, elongate body shape) the concordant patterns of these two groups provide strong evidence for the evolution of an optimal body size within independent monophyletic groups. However, snakes differ from other taxonomic groups that have been studied in exhibiting a body size distribution that is not obviously skewed in either direction. We suggest that idiosyncratic features of the natural history of ectotherms allow relatively unconstrained distributions of body size whereas physiological limitations of endotherms constrain distributions of body size to a right skew. [source]


    EXHAUSTION OF MORPHOLOGIC CHARACTER STATES AMONG FOSSIL TAXA

    EVOLUTION, Issue 2 2000
    Peter J. Wagner
    Abstract., Frequencies of new character state derivations are analyzed for 56 fossil taxa. The hypothesis that new character states are added continuously throughout clade history can be rejected for 48 of theses clades. Two alternative explanations are considered: finite states and ordered states. The former hypothesizes a limited number of states available to each character and is tested using rarefaction equations. The latter hypothesizes that there are limited possible descendant morphologies for any state, even if the character has infinite potential states. This is tested using power functions. The finite states hypothesis explains states: steps relationships significantly better than does the ordered states hypothesis in 14 cases; the converse is true for 14 other cases. Under either hypothesis, trilobite clades show appreciably more homoplasy after the same numbers of steps than do molluscs, echinoderms, or vertebrates. The prevalence of the exhaustion pattern among different taxonomic groups implies that worker biases are not to blame and instead implicates biological explanations such as intrinsic constraints or persistent selective trends. Regardless of the source of increased homoplasy, clades appear to exhaust their available character spaces. Nearly all examined taxa show significant increases in proportions of incompatible character pairs (i.e., those necessarily implying homoplasy) as progressively younger taxa are added to character matrices. Thus, a deterioration of hierarchical structure accompanies character state exhaustion. Exhaustion has several implications: (1) the basic premise of cladistic analyses (i.e., that maximum congruence reflects homology rather than homoplasy) becomes increasingly less sound as clades age; (2) sampling high proportions of taxa probably is needed for congruence to discern homoplasy from homology; (3) stratigraphic data might be necessary to discern congruent homoplasy from congruent homology; and (4) in many cases, character states appear to have evolved in ordered patterns. [source]


    Evolution of the nose and nasal skeleton in primates

    EVOLUTIONARY ANTHROPOLOGY, Issue 4 2007
    Timothy D. Smith
    Abstract One traditional diagnostic feature of the Order Primates is a decreased emphasis on olfaction.1, 2 Some authors attribute this feature only to tarsiers and anthropoids, either through convergence or as a common feature of haplorhines.2,4 Other authors de-emphasize olfaction relative to vision,5,7 which does not necessarily denote olfactory reduction per se. There are lengthy roots to this discussion. The importance of the sense of smell to at least some primates, humans in particular, has long been viewed as secondary to the importance of visual, auditory, and tactile senses. Smell, or olfaction, is viewed as the primitive special sense, the stimuli perceived in an unconscious manner, submerged relative to higher neural functions,1 and a sense that has been increasingly reduced during the course of primate evolution.1,8 Anatomical structures related to olfaction differ profoundly in proportions and complexity between higher taxonomic groups of primates (Haplorhini, Strepsirrhini). These anatomical differences are beyond dispute (Box 1). However, the relationship between the anatomical differences and primate sensory abilities, and hence the validity of using them to group primates into "microsmatic" or "macrosmatic" categories,9, 10 is less clear when we examine the physiological and genetic data on primate olfaction. [source]


    Genomic structure and expression analysis of the RNase , family ortholog gene in the insect Ceratitis capitata

    FEBS JOURNAL, Issue 24 2008
    Theodoros N. Rampias
    Cc RNase is the founding member of the recently identified RNase , family, which is represented by a single ortholog in a wide range of animal taxonomic groups. Although the precise biological role of this protein is still unknown, it has been shown that the recombinant proteins isolated so far from the insect Ceratitis capitata and from human exhibit ribonucleolytic activity. In this work, we report the genomic organization and molecular evolution of the RNase , gene from various animal species, as well as expression analysis of the ortholog gene in C. capitata. The high degree of amino acid sequence similarity, in combination with the fact that exon sizes and intronic positions are extremely conserved among RNase , orthologs in 15 diverse genomes from sea anemone to human, imply a very significant biological function for this enzyme. In C. capitata, two forms of RNase , mRNA (0.9 and 1.5 kb) with various lengths of 3, UTR were identified as alternative products of a single gene, resulting from the use of different polyadenylation signals. Both transcripts are expressed in all insect tissues and developmental stages. Sequence analysis of the extended region of the longer transcript revealed the existence of three mRNA instability motifs (AUUUA) and five poly(U) tracts, whose functional importance in RNase , mRNA decay remains to be explored. [source]


    Ecological processes influencing mortality of juvenile pink salmon (Oncorhynchus gorbuscha) in Prince William Sound, Alaska

    FISHERIES OCEANOGRAPHY, Issue 2001
    T. M. Willette
    Abstract Our collaborative work focused on understanding the system of mechanisms influencing the mortality of juvenile pink salmon (Oncorhynchus gorbuscha) in Prince William Sound, Alaska. Coordinated field studies, data analysis and numerical modelling projects were used to identify and explain the mechanisms and their roles in juvenile mortality. In particular, project studies addressed the identification of major fish and bird predators consuming juvenile salmon and the evaluation of three hypotheses linking these losses to (i) alternative prey for predators (prey-switching hypothesis); (ii) salmon foraging behaviour (refuge-dispersion hypothesis); and (iii) salmon size and growth (size-refuge hypothesis). Two facultative planktivorous fishes, Pacific herring (Clupea pallasi) and walleye pollock (Theragra chalcogramma), probably consumed the most juvenile pink salmon each year, although other gadids were also important. Our prey-switching hypothesis was supported by data indicating that herring and pollock switched to alternative nekton prey, including juvenile salmon, when the biomass of large copepods declined below about 0.2 g m,3. Model simulations were consistent with these findings, but simulations suggested that a June pteropod bloom also sheltered juvenile salmon from predation. Our refuge-dispersion hypothesis was supported by data indicating a five-fold increase in predation losses of juvenile salmon when salmon dispersed from nearshore habitats as the biomass of large copepods declined. Our size-refuge hypothesis was supported by data indicating that size- and growth-dependent vulnerabilities of salmon to predators were a function of predator and prey sizes and the timing of predation events. Our model simulations offered support for the efficacy of representing ecological processes affecting juvenile fishes as systems of coupled evolution equations representing both spatial distribution and physiological status. Simulations wherein model dimensionality was limited through construction of composite trophic groups reproduced the dominant patterns in salmon survival data. In our study, these composite trophic groups were six key zooplankton taxonomic groups, two categories of adult pelagic fishes, and from six to 12 groups for tagged hatchery-reared juvenile salmon. Model simulations also suggested the importance of salmon density and predator size as important factors modifying the predation process. [source]


    Guanine-Based Biogenic Photonic-Crystal Arrays in Fish and Spiders

    ADVANCED FUNCTIONAL MATERIALS, Issue 2 2010
    Avital Levy-Lior
    Abstract Biological photonic systems composed of anhydrous guanine crystals evolved separately in several taxonomic groups. Here, two such systems found in fish and spiders, both of which make use of anhydrous guanine crystal plates to produce structural colors, are examined. Measurements of the photonic-crystal structures using cryo-SEM show that the crystal plates in both fish skin and spider integument are ,20-nm thick. The reflective unit in the fish comprises stacks of single plates alternating with ,230-nm-thick cytoplasm layers. In the spiders the plates are formed as doublet crystals, cemented by 30-nm layers of amorphous guanine, and are stacked with ,200,nm of cytoplasm between crystal doublets. They achieve light reflective properties through the control of crystal morphology and stack dimensions, reaching similar efficiencies of light reflectivity in both fish skin and spider integument. The structure of guanine plates in spiders are compared with the more common situation in which guanine occurs in the form of relatively unorganized prismatic crystals, yielding a matt white coloration. [source]


    The use of indicator taxa as representatives of communities in bioassessment

    FRESHWATER BIOLOGY, Issue 8 2005
    R. C. NIJBOER
    Summary 1. Sampling and processing of benthic macroinvertebrate samples is time consuming and expensive. Although a number of cost-cutting options exist, a frequently asked question is how representative a subset of data is of the whole community, in particular in areas where habitat diversity is high (like Dutch surface water habitats). 2. Weighted averaging was used to reassign 650 samples to a typology of 40 community types, testing the representativeness of different subsets of data: (i) four different types of data (presence/absence, raw, 2log- and ln-transformed abundance), (ii) three subsets of ,indicator' taxa (taxa with indicator weights 4,12, 7,12, and 10,12) and (iii) single taxonomic groups (n = 14) by determining the classification error. 3. 2log- and ln-transformed abundances resulted in the lowest classification error, whilst the use of qualitative data resulted in a reduction of 10% of the samples assigned to their original community type compared to the use of ln-transformed abundance data. 4. Samples from community types with a high number of unique indicator taxa had the lowest classification error, and classification error increased as similarity among community types increased. Using a subset of indicator taxa resulted in a maximum increase of the classification error of 15% when only taxa with an indicator weight 10,12 were included (error = 49.1%). 5. Use of single taxonomic groups resulted in high classification error, the lowest classification error was found using Trichoptera (68%), and was related to the frequency of the taxonomic group among samples and the indicator weights of the taxa. 6. Our findings that the use of qualitative data, subsets of indicator taxa or single taxonomic groups resulted in high classification error implies low taxonomic redundancy, and supports the use of all taxa in characterising a macroinvertebrate community, in particular in areas where habitat diversity is high. [source]


    Is biofuel policy harming biodiversity in Europe?

    GCB BIOENERGY, Issue 1 2009
    JEANNETTE EGGERS
    Abstract We assessed the potential impacts of land-use changes resulting from a change in the current biofuel policy on biodiversity in Europe. We evaluated the possible impact of both arable and woody biofuel crops on changes in distribution of 313 species pertaining to different taxonomic groups. Using species-specific information on habitat suitability as well as land use simulations for three different biofuel policy options, we downscaled available species distribution data from the original resolution of 50 to 1 km. The downscaled maps were then applied to analyse potential changes in habitat size and species composition at different spatial levels. Our results indicate that more species might suffer from habitat losses rather than benefit from a doubled biofuel target, while abolishing the biofuel target would mainly have positive effects. However, the possible impacts vary spatially and depend on the biofuel crop choice, with woody crops being less detrimental than arable crops. Our results give an indication for policy and decision makers of what might happen to biodiversity under a changed biofuel policy in the European Union. The presented approach is considered to be innovative as to date no comparable policy impact assessment has been applied to such a large set of key species at the European scale. [source]


    Getting the biodiversity intactness index right: the importance of habitat degradation data

    GLOBAL CHANGE BIOLOGY, Issue 11 2006
    MATHIEU ROUGET
    Abstract Given high-level commitments to reducing the rate of biodiversity loss by 2010, there is a pressing need to develop simple and practical indicators to monitor progress. In this context, a biodiversity intactness index (BII) was recently proposed, which provides an overall indicator suitable for policy makers. The index links data on land use with expert assessments of how this impacts the population densities of well-understood taxonomic groups to estimate current population sizes relative to premodern times. However, when calculated for southern Africa, the resulting BII of 84% suggests a far more positive picture of the state of wild nature than do other large-scale estimates. Here, we argue that this discrepancy is in part an artefact of the coarseness of the land degradation data used to calculate the BII, and that the overall BII for southern Africa is probably much lower than 84%. In particular, based on two relatively inexpensive, ground-truthed studies of areas not generally regarded as exceptional in terms of their degradation status, we demonstrate that Scholes and Biggs might have seriously underestimated the extent of land degradation. These differences have substantial bearing on BII scores. Urgent attention should be given to the further development of cost-effective ground-truthing methods for quantifying the extent of land degradation in order to provide reliable estimates of biodiversity loss, both in southern Africa and more widely. [source]


    Do arthropod assemblages display globally consistent responses to intensified agricultural land use and management?

    GLOBAL ECOLOGY, Issue 5 2008
    S. J. Attwood
    ABSTRACT Aim, To determine whether arthropod richness and abundance for combined taxa, feeding guilds and broad taxonomic groups respond in a globally consistent manner to a range of agricultural land-use and management intensification scenarios. Location, Mixed land-use agricultural landscapes, globally. Methods, We performed a series of meta-analyses using arthropod richness and abundance data derived from the published literature. Richness and abundance were compared among land uses that commonly occur in agricultural landscapes and that represent a gradient of increasing intensification. These included land-use comparisons, such as wooded native vegetation compared with improved pasture, and a management comparison, reduced-input cropping compared with conventional cropping. Data were analysed using three different meta-analytical techniques, including a simple vote counting method and a formal fixed-effects/random-effects meta-analysis. Results, Arthropod richness was significantly higher in areas of less intensive land use. The decline in arthropod richness was greater between native vegetation and agricultural land uses than among different agricultural land uses. These patterns were evident for all taxa combined, predators and decomposers, but not herbivorous taxa. Overall, arthropod abundance was greater in native vegetation than in agricultural lands and under reduced-input cropping compared with conventional cropping. Again, this trend was largely mirrored by predators and decomposers, but not herbivores. Main conclusions, The greater arthropod richness found in native vegetation relative to agricultural land types indicates that in production landscapes still containing considerable native vegetation, retention of that vegetation may well be the most effective method of conserving arthropod biodiversity. Conversely, in highly intensified agricultural landscapes with little remaining native vegetation, the employment of reduced-input crop management and the provision of relatively low-intensity agricultural land uses, such as pasture, may prove effective in maintaining arthropod diversity, and potentially in promoting functionally important groups such as predators and decomposers. [source]


    Scale and trends in species richness: considerations for monitoring biological diversity for political purposes

    GLOBAL ECOLOGY, Issue 2 2004
    Darius Weber
    ABSTRACT Switzerland's governmental ,Biodiversity Monitoring' program is designed to produce factual information on the dynamics of biodiversity within the country for governmental agencies, politicians, and the general public. Monitoring a complex issue like biodiversity in order to give relevant and accurate messages to the general public and politicians within a politically relevant timescale and at moderate cost means focusing on few elements. Because relevant human impacts on biodiversity operate differently at different spatial scales, we need at least three different indicators to observe changes over time in local (,within-habitat'), landscape (,habitat-mosaic'), and macro-scale (,regional') diversity. To keep things as simple as possible, we use species richness as an indicator for all three levels of diversity, just defining three different spatial scales (10 m2, 1 km2, regions, respectively). Each indicator is based on a number of taxonomic groups which have been selected mainly on the basis of costs and the availability of appropriate methods. [source]


    How does grazing intensity influence the diversity of plants and insects in a species-rich upland grassland on basalt soils?

    GRASS & FORAGE SCIENCE, Issue 1 2009
    B. Dumont
    Abstract The effect of stocking rate on the species richness, abundance and functional diversity of vascular plants, butterflies and grasshoppers was examined in a semi-natural upland pasture in central France. Over a 5-year period, 3·6-ha plots were continuously grazed by Charolais heifers at 1·4 (High stocking rate), 1·0 (Intermediate) and 0·6 (Low) livestock units (LU) ha,1. To evaluate botanical diversity, percentage cover of all plant species was estimated in late July in ten fixed 1 m × 1 m quadrats per plot. Butterflies were counted on three occasions between late June and early August along three fixed 50-m-long transects per plot using the ,Pollard walk', with grasshoppers being recorded on two occasions along the same transects. Diversity patterns of the three taxa were affected by stocking rate. For plants, species abundance changed more than species number. Abundance of forbs became higher under the Low compared with the High stocking rate. Stress-tolerant grasses were also more abundant in plots grazed at the Low stocking rate, while an opposite trend was observed for competitive grasses. Butterflies consistently responded to alterations in vegetation composition, especially to the dynamics of nectar plants. The species richness of grasshoppers also increased in plots at the Low stocking rate. The Low and Intermediate stocking rates were suitable for providing a high diversity of the three taxonomic groups. The results suggested that at least butterfly diversity would peak in vegetation taller than that of vascular plants. [source]


    Flight characteristics of birds:

    IBIS, Issue 2 2001
    I. radar measurements of speeds
    This is the first part of a study on flight characteristics of birds and presents an annotated list of flight speeds of 139 western Palearctic species. All measurements were taken with the same tracking radar and corrected for wind influence according to radar-tracked wind-measuring balloons. Graphical presentation of the birds' air speeds emphasizes the wide variation of speeds within species and allows easy comparison between taxonomic groups, species, and types of flight. Unlike theoretical predictions, speeds increase only slightly with size. The larger species seem to be increasingly limited to speeds close to their speed of minimum power consumption Vmp',. Released birds, apparently reluctant to depart with migratory speed, fly at considerably lower speeds than migrating conspecifics. While large birds seem to be limited to speeds around Vmp', smaller birds seem to be capable of selecting between various speeds, approaching predicted Vmp, when tending to remain airborne at low cost, but flying at much higher speeds when tending to make best progress at low cost (around predicted speed of maximum range Vmr,). Predictions of air speeds by aerodynamic models proved to be too low for small birds because the models do not account for the gain in speed attained by the reduction in profile drag during bounding flight of small passerines. The models predict excessive speeds for large birds because the power output available for flight seems to decline much more with size than previously assumed. [source]


    Molecular systematics of the speciose Indo-Pacific soft coral genus, Sinularia (Anthozoa: Octocorallia)

    INVERTEBRATE BIOLOGY, Issue 4 2009
    Catherine S. McFadden
    Abstract. The speciose tropical soft coral genus Sinularia traditionally has been divided into five intrageneric taxonomic groups based on variation in a single morphological character: the shape of the club sclerites (calcite skeletal elements) embedded in the surface tissues of the colony. To test the phylogenetic utility of this system of classification, we used a 735-bp fragment of the octocoral-specific mitochondrial msh1 gene to construct a molecular phylogeny that included 80 of the ,150 recognized morphospecies of Sinularia. The msh1 phylogeny recovered five well-supported clades, but they were not congruent with the traditional intrageneric taxonomic groups. Mapping of characters onto the tree suggested that the five major clades plus several additional sub-clades of Sinularia can be distinguished based on a suite of four morphological characters; these include the presence of sclerites in the tentacle, collaret, and point regions of the polyps, in addition to the shape of the club sclerites in the surface tissues. The overall growth form of the colony also distinguishes some clades. Polyp sclerites have for the most part been overlooked taxonomically in Sinularia, and as a result information on these characters is lacking or is incorrect in many species descriptions. As has been the case in other recent studies of lower metazoan groups, construction of a molecular phylogeny has led us to recognize the phylogenetic and taxonomic importance of previously overlooked morphological characters. A revised taxonomic key that includes these characters is already improving our ability to discriminate species boundaries, and facilitating description of new Sinularia species. [source]


    Surrogacy and persistence in reserve selection: landscape prioritization for multiple taxa in Britain

    JOURNAL OF APPLIED ECOLOGY, Issue 1 2009
    Aldina M. A. Franco
    Summary 1A principal goal of protected-area networks is to maintain viable populations of as many species as possible, particularly those that are vulnerable to environmental change outside reserves. Ideally, one wants to be able to protect all biodiversity when selecting priority areas for conservation. 2Using the area-prioritization algorithm ZONATION, we identified the locations where UK Biodiversity Action Plan (BAP) species of mammals, birds, herptiles, butterflies and plants occur in concentrated populations with high connectivity. Both these features are likely to be correlated with population persistence. The analyses were successful in maintaining a high proportion of the connectivity of narrow-range species, and large total amounts of the connectivity of wider-range species over 10% of the land surface of Great Britain. 3Biodiversity Action Plan (BAP , high priority) species of one taxonomic group were not particularly good surrogates (indicators) for BAP species of other taxonomic groups. Hence, maintaining population concentrations of one taxonomic group did not guarantee doing likewise for other taxa. 4Species with narrow geographic ranges were most effective at predicting conservation success for other species, probably because they represent the range of environmental conditions required by other species. 5Synthesis and applications. This study identifies landscape-scale priority areas for conservation of priority species from several taxonomic groups, using the Zonation software. ,Indicator groups' were only partially successful as predictors of priority areas for other taxonomic groups, and therefore, the identification of priority areas for biodiversity conservation should include information from all taxonomic groups available. Larger areas should be protected to account for species not included in the analyses. Conservation solutions based on data for many different species, and particularly those species with narrowly defined ranges, appear to be most effective at protecting other rare taxa. [source]


    Indicators for biodiversity in agricultural landscapes: a pan-European study

    JOURNAL OF APPLIED ECOLOGY, Issue 1 2008
    R. Billeter
    Summary 1In many European agricultural landscapes, species richness is declining considerably. Studies performed at a very large spatial scale are helpful in understanding the reasons for this decline and as a basis for guiding policy. In a unique, large-scale study of 25 agricultural landscapes in seven European countries, we investigated relationships between species richness in several taxa, and the links between biodiversity and landscape structure and management. 2We estimated the total species richness of vascular plants, birds and five arthropod groups in each 16-km2 landscape, and recorded various measures of both landscape structure and intensity of agricultural land use. We studied correlations between taxonomic groups and the effects of landscape and land-use parameters on the number of species in different taxonomic groups. Our statistical approach also accounted for regional variation in species richness unrelated to landscape or land-use factors. 3The results reveal strong geographical trends in species richness in all taxonomic groups. No single species group emerged as a good predictor of all other species groups. Species richness of all groups increased with the area of semi-natural habitats in the landscape. Species richness of birds and vascular plants was negatively associated with fertilizer use. 4Synthesis and applications. We conclude that indicator taxa are unlikely to provide an effective means of predicting biodiversity at a large spatial scale, especially where there is large biogeographical variation in species richness. However, a small list of landscape and land-use parameters can be used in agricultural landscapes to infer large-scale patterns of species richness. Our results suggest that to halt the loss of biodiversity in these landscapes, it is important to preserve and, if possible, increase the area of semi-natural habitat. [source]


    Occurrence and life history correlates of vocal duetting in North American passerines

    JOURNAL OF AVIAN BIOLOGY, Issue 1 2008
    Lauryn Benedict
    Vocal duetting, where two birds produce temporally coordinated vocalizations, has been reported in a taxonomically and geographically diverse set of avian species. Researchers have suggested a number of potential correlates of duetting, including long term monogamy, year-round territory defense and sexual plumage monomorphism. Because the majority of duetting species are tropical, they have been the focus of the most comprehensive studies to date. There is, therefore, a real need for data regarding avian duets in temperate species. I used the recently completed Birds of North America species reports to examine the frequency, evolutionary origins and potential life history correlates of duetting behavior in North American passerines. "Duetting" behavior was reported in 7% of species from 12 avian families, likely representing 17 separate evolutionary origins. Duetting species showed apparent long term monogamy and year-round territoriality at frequencies more than double those of non-duetting passerines: 65% of duetting species were long term monogamous, compared to 27% of non-duetting species, and 50% of duetting species defended the same territory throughout the year, compared with only 11% of non-duetting species. Duetting and non-duetting species showed statistically indistinguishable frequencies of sexual plumage monomorphism. Comparative analyses of duetting species and their sister taxa revealed that the shift to duetting is accompanied by a gain of long term monogamy and year-round territoriality more often than it is associated with a loss of those traits. This study provides intriguing summary evidence that selective factors promoting duetting may be associated with a sedentary, monogamous lifestyle, and may operate similarly across taxonomic groups. Furthermore, vocal duetting may be considerably more common among temperate-zone species than previously recognized. [source]


    Atlantic reef fish biogeography and evolution

    JOURNAL OF BIOGEOGRAPHY, Issue 1 2008
    S. R. Floeter
    Abstract Aim, To understand why and when areas of endemism (provinces) of the tropical Atlantic Ocean were formed, how they relate to each other, and what processes have contributed to faunal enrichment. Location, Atlantic Ocean. Methods, The distributions of 2605 species of reef fishes were compiled for 25 areas of the Atlantic and southern Africa. Maximum-parsimony and distance analyses were employed to investigate biogeographical relationships among those areas. A collection of 26 phylogenies of various Atlantic reef fish taxa was used to assess patterns of origin and diversification relative to evolutionary scenarios based on spatio-temporal sequences of species splitting produced by geological and palaeoceanographic events. We present data on faunal (species and genera) richness, endemism patterns, diversity buildup (i.e. speciation processes), and evaluate the operation of the main biogeographical barriers and/or filters. Results, Phylogenetic (proportion of sister species) and distributional (number of shared species) patterns are generally concordant with recognized biogeographical provinces in the Atlantic. The highly uneven distribution of species in certain genera appears to be related to their origin, with highest species richness in areas with the greatest phylogenetic depth. Diversity buildup in Atlantic reef fishes involved (1) diversification within each province, (2) isolation as a result of biogeographical barriers, and (3) stochastic accretion by means of dispersal between provinces. The timing of divergence events is not concordant among taxonomic groups. The three soft (non-terrestrial) inter-regional barriers (mid-Atlantic, Amazon, and Benguela) clearly act as ,filters' by restricting dispersal but at the same time allowing occasional crossings that apparently lead to the establishment of new populations and species. Fluctuations in the effectiveness of the filters, combined with ecological differences among provinces, apparently provide a mechanism for much of the recent diversification of reef fishes in the Atlantic. Main conclusions, Our data set indicates that both historical events (e.g. Tethys closure) and relatively recent dispersal (with or without further speciation) have had a strong influence on Atlantic tropical marine biodiversity and have contributed to the biogeographical patterns we observe today; however, examples of the latter process outnumber those of the former. [source]


    Biotic homogenization: a new research agenda for conservation biogeography

    JOURNAL OF BIOGEOGRAPHY, Issue 12 2006
    Julian D. Olden
    Abstract Aim, Biotic homogenization describes the process by which species invasions and extinctions increase the genetic, taxonomic or functional similarity of two or more biotas over a specified time interval. The study of biotic homogenization is a young and rapidly emerging research area in the budding field of conservation biogeography, and this paper aims to synthesize our current knowledge of this process and advocate a more systematic approach to its investigation. Methods, Based on a comprehensive examination of the primary literature this paper reviews the process of biotic homogenization, including its definition, quantification, underlying ecological mechanisms, environmental drivers, the empirical evidence for different taxonomic groups, and the potential ecological and evolutionary implications. Important gaps in our knowledge are then identified, and areas of new research that show the greatest promise for advancing our current thinking on biotic homogenization are highlighted. Results, Current knowledge of the patterns, mechanisms and implications of biotic homogenization is highly variable across taxonomic groups, but in general is incomplete. Quantitative estimates are almost exclusively limited to freshwater fishes and plants in the United States, and the principal mechanisms and drivers of homogenization remain elusive. To date research has focused on taxonomic homogenization, and genetic and functional homogenization has received inadequate attention. Trends over the past decade, however, suggest that biotic homogenization is emerging as a topic of greater research interest. Main conclusions, My investigation revealed a number of important knowledge gaps and priority research needs in the science of biotic homogenization. Future studies should examine the homogenization process for different community properties (species occurrence and abundance) at multiple spatial and temporal scales, with careful attention paid to the various biological mechanisms (invasions vs. extinctions) and environmental drivers (environmental alteration vs. biotic interactions) involved. Perhaps most importantly, this research should recognize that there are multiple possible outcomes resulting from the accumulation of species invasions and extinctions, including biotic differentiation whereby genetic, taxonomic or functional similarity of biotas decreases over time. [source]


    Representing species in reserves from patterns of assemblage diversity

    JOURNAL OF BIOGEOGRAPHY, Issue 7 2004
    M. B. Araújo
    Abstract Aim, A positive relationship between assemblage diversity (AD) , equivalent to the biotic version of the environment diversity, ED, method , and species diversity has been reported. This being true, reserve networks with many different assemblages would be expected to represent more species than reserve networks including fewer and less different assemblages. This idea was tested using European species atlas distributions of terrestrial vertebrates and plants. It is asked whether: (1) maximizing AD within one group would represent species diversity of this group better than expected by chance; and (2) maximizing AD within one group would represent species diversity of other groups better than expected by chance. Location, Europe. Methods, Three ordination techniques (non-metric multidimensional scaling, detrended correspondence analysis and correspondence analysis) are used to summarize patterns of compositional turnover within assemblages. p -Median location-allocation models are then calculated from ordination space to measure the degree of expected species representation within the group being sampled as well as the expected representation within other groups. Results are compared with near-optimal solutions obtained with complementarity-based algorithms and to a null model obtained by simulating selection of areas at random. Matrix correlation analysis was also performed to investigate broad patterns of covariation in compositional turnover of assemblages of species belonging to different taxonomic groups and these values were compared with correlation in species richness scores between groups. Results, The AD model did not always represent more species of the group being sampled than expected by chance (P < 0.05). Results were independent of the method and taxonomic group considered. Effectiveness of AD within one group to represent species of other groups varied, but in most cases it was worse than using complementarity-based algorithms as a surrogate strategy. Even when correlations indicated high coincidence between assemblages, taxonomic-based surrogates did not always recover more species than expected by chance (P < 0.05). Main conclusions, Results are discussed in the light of two possible explanations: (1) the AD model is based on unrealistic assumptions, namely that species have equal probability of having the centre of their distributions anywhere in ordination space and that species display unimodal, symmetrical, bell-shaped response curves to gradients; (2) particular implementation of methods may be inadequate to summarize useful complementarity among assemblages, especially for restricted-range species. We conclude that both arguments are likely to play a role in explaining results, but that opportunities exist to improve performance of existing surrogate strategies. [source]


    The biology of insularity: an introduction

    JOURNAL OF BIOGEOGRAPHY, Issue 5-6 2002
    Donald R. Drake
    Insular environments, ranging from oceanic islands to fragments of once-contiguous natural systems, have long been used by biologists to test basic principles of ecology, evolution and biogeography. More recently, insular environments have figured prominently in conservation ecology, where the aim has usually been to conserve species or assemblages unique to isolated habitats. Improving the level of communication among the evolutionary biologists, theoretical ecologists and conservation biologists who study insular biotas will work to the benefit of all. This volume was inspired by a recent conference on the ecology of insular biotas, in which participants from a wide range of disciplines came together to compare ecological processes across a variety of taxonomic groups inhabiting a wide range of isolated environments. In this introduction, we point out the themes underlying these very diverse contributions. First we elaborate on the value of islands for elucidating processes underlying ecosystem functioning, population dynamics of reintroduced species, and restoration of disturbed habitats, and emphasize those areas where the use of islands could be expanded. The second section focuses on the link between ecology and evolutionary processes in insular systems and includes examples from oceanic islands, naturally patchy habitats and recently fragmented habitats. The third section illustrates some of the ways that invasive alien species on oceanic islands affect plant,animal mutualisms, particularly seed dispersal and pollination. The final section, on consequences of habitat fragmentation, focuses mainly on studies that describe the consequences that fragmentation has for plants and animals as they are forced into artificially insular environments. We close with a study that points out the differences among types of insular systems and identifies gaps in our knowledge of insular biotas, particularly the importance of explicitly incorporating patch type, age and patch,matrix contrasts in research. Finally, we recommend a greater emphasis on linking ecological theory and applied research, and improving communication between those who ask basic ecological questions and those who use insular systems for conservation. [source]