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Species Distributions (species + distribution)

Distribution by Scientific Domains
Life Sciences78%
Earth and Environmental Science9%
4 Other Domains13%
Distribution within Life Sciences
Ecology & Organismal Biology41%
Conservation Science19%
Evolution7%
Evolutionary Biology2%
13 Other Subdomains31%

Kinds of Species Distributions

  • individual species distribution
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  • modelling species distribution
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  • plant species distribution
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    Terms modified by Species Distributions

  • species distribution data
  • species distribution modelling
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  • species distribution models
  • species distribution range
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    Selected Abstracts

    One Hundred Fifty Years of Change in Forest Bird Breeding Habitat: Estimates of Species Distributions

    CONSERVATION BIOLOGY, Issue 6 2005
    LISA A. SCHULTE
    aptitud del hábitat; ecología aviar; ecología de paisaje; planificación de conservación Abstract:,Evaluating bird population trends requires baseline data. In North America the earliest population data available are those from the late 1960s. Forest conditions in the northern Great Lake states (U.S.A.), however, have undergone succession since the region was originally cut over around the turn of the twentieth century, and it is expected that bird populations have undergone concomitant change. We propose pre-Euro-American settlement as an alternative baseline for assessing changes in bird populations. We evaluated the amount, quality, and distribution of breeding bird habitat during the mid-1800s and early 1990s for three forest birds: the Pine Warbler (Dendroica pinus), Blackburnian Warbler (D. fusca), and Black-throated Green Warbler (D. virens). We constructed models of bird and habitat relationships based on literature review and regional data sets of bird abundance and applied these models to widely available vegetation data. Original public-land survey records represented historical habitat conditions, and a combination of forest inventory and national land-cover data represented current conditions. We assessed model robustness by comparing current habitat distribution to actual breeding bird locations from the Wisconsin Breeding Bird Atlas. The model showed little change in the overall amount of Pine Warbler habitat, whereas both the Blackburnian Warber and the Black-throated Green Warbler have experienced substantial habitat losses. For the species we examined, habitat quality has degraded since presettlement and the spatial distribution of habitat shifted among ecoregions, with range expansion accompanying forest incursion into previously open habitats or the replacement of native forests with pine plantations. Sources of habitat loss and degradation include loss of conifers and loss of large trees. Using widely available data sources in a habitat suitability model framework, our method provides a long-term analysis of change in bird habitat and a presettlement baseline for assessing current conservation priority. Resumen:,La evaluación de tendencias de las poblaciones de aves requiere de datos de referencia. En Norte América, los primeros datos disponibles de poblaciones son del final de la década de 1960. Sin embargo, las condiciones de los bosques en los estados de los Grandes Lagos (E.U.A.) han experimentado sucesión desde que la región fue talada en los inicios del siglo veinte, y se espera que las poblaciones de aves hayan experimentado cambios concomitantes. Proponemos que se considere al período previo a la colonización euro americana como referencia alternativa para evaluar los cambios en las poblaciones de aves. Evaluamos la cantidad, calidad y distribución del hábitat para reproducción de tres especies de aves de bosque (Dendroica pinus, D. fusca y D. virens) a mediados del siglo XIX e inicios del XX. Construimos modelos de las relaciones entre las aves y el hábitat con base en la literatura y conjuntos de datos de abundancia de aves y los aplicamos a los datos de vegetación ampliamente disponibles. Los registros topográficos de tierras públicas originales representaron las condiciones históricas del hábitat, y una combinación de datos del inventario forestal y de cobertura de suelo representaron las condiciones actuales. Evaluamos la robustez del modelo mediante la comparación de la distribución de hábitat actual con sitios de reproducción de aves registrados en el Wisconsin Breeding Bird Atlas. El modelo mostró poco cambio en la cantidad total de hábitat de Dendroica pinus, mientras que tanto D. fusca como D. virens han experimentado pérdidas sustanciales de hábitat. Para las especies examinadas, la calidad del hábitat se ha degradado desde antes de la colonización y la distribución espacial del hábitat cambió entre ecoregiones, con la expansión del rango acompañando la incursión de bosques en hábitats anteriormente abiertos o el reemplazo de bosques nativos con plantaciones de pinos. Las fuentes de pérdida y degradación de hábitats incluyen la pérdida de coníferas y de árboles grandes. Mediante la utilización de fuentes de datos ampliamente disponibles en un modelo de aptitud de hábitat, nuestro método proporciona un análisis a largo plazo de los cambios en el hábitat de aves y una referencia precolonización para evaluar prioridades de conservación actuales. [source]

    Dynamic coupled metal transport-speciation model: Application to assess a zinc-contaminated lake

    ENVIRONMENTAL TOXICOLOGY & CHEMISTRY, Issue 10 2004
    Satyendra P. Bhavsar
    Abstract A coupled metal transport and speciation/complexation model (TRANSPEC) has been developed to estimate the speciation and fate of multiple interconverting species in surface aquatic systems. Dynamic-TRANSPEC loosely, sequentially couples the speciation/complexation and fate modules that, for the unsteady state formulation, run alternatively at every time step. The speciation module first estimates species abundance using, in this version, MINEQL+ considering time-dependent changes in water and pore-water chemistry. The fate module is based on the quantitative water air sediment interaction (QWASI) model and fugacity/aquivalence formulation, with the option of using a pseudo-steady state solution to account for past discharges. Similarly to the QWASI model for organic contaminants, TRANSPEC assumes the instantaneous equilibrium distribution of metal species among dissolved, colloidal, and particulate phases based on ambient chemistry parameters that can be collected through conventional field methods. The model is illustrated with its application to Ross Lake (Manitoba, Canada) that has elevated Zn concentrations due to discharges over 70 years from a mining operation. Using measurements from field studies, the model reproduces year-round variations in Zn water concentrations. A 10-year projection for current conditions suggests decreasing Zn remobilization and export from the lake. Decreasing Zn loadings increases sediment-to-water transport but decreases water concentrations, and vice versa. Species distribution is affected by pH such that a decrease in pH increases metal export from the lake and vice versa. [source]

    Speciation and susceptibility of Nocardia isolated from ocular infections

    CLINICAL MICROBIOLOGY AND INFECTION, Issue 8 2010
    A.K. Reddy
    Clin Microbiol Infect 2010; 16: 1168,1171 Abstract Twenty Nocardia spp. isolated from ocular infections were identified by 16S rRNA gene sequencing and susceptibility was determined using the E-test (AB Biodisk, Sweden). Species distribution among the 20 isolates was as follows: Nocardia levis (n = 7), Nocardia farcinica (n = 3), Nocardia abscessus (n = 2), Nocardia brasiliensis (n = 2), Nocardia amamiensis (n = 2), Nocardia puris (n = 1), Nocardia beijingensis (n = 1), Nocardia otitidiscaviarum (n = 1) and Nocardia thailandica (n = 1). All isolates were sensitive to amikacin. Eighteen (90%) isolates were sensitive to tobramycin, 11 (55%) to ciprofloxacin and gatifloxacin, and seven (35%) to azithromycin and clarithromycin. Molecular methods are useful for the identification and for the detection of Nocardia species that have not so far been reported in human infections. [source]

    The Indochinese,Sundaic zoogeographic transition: a description and analysis of terrestrial mammal species distributions

    JOURNAL OF BIOGEOGRAPHY, Issue 5 2009
    David S. Woodruff
    Abstract Aim, We describe the distributions of mammal species between the Indochinese and Sundaic subregions and examine the traditional view that the two faunas show a transition near the Isthmus of Kra on the Thai,Malay peninsula. Location, Species distributions are described along a 2000-km transect from 20° N (northernmost Thailand) to 1° N (Singapore). Methods, For the 325 species of native non-marine mammals occurring along the transect we used published records to provide a database of their distributional records by degree of latitude. Results, Along the transect we found 128 Indochinese species with southern range limits, 121 Sundaic species with northern range limits, four un-assignable endemics and 72 widespread species. In total, 152 southern and 147 northern range limits were identified, and their distribution provides no evidence for a narrow faunal transition near the Isthmus of Kra (10°30, N) or elsewhere. Range limits of both bats and non-volant mammals cluster in northernmost peninsular Malaysia (5° N) and 800 km further north, where the peninsula joins the continent proper (14° N). The clusters of northern and southern range limits are not concordant but overlap by 100,200 km. Similarly, the range limits of bats and non-volant mammals cluster at slightly different latitudes. There are 30% fewer species and range limits in the central and northern peninsula (between 6 and 13° N), and 35 more widely distributed species have range gaps in this region. In addition, we found 70 fewer species at the southern tip of the peninsula (1° N) than at 3,4° N. Main conclusions, The deficiencies of both species and species range limits in the central and northern peninsula are attributed to an area effect caused by repeated sea-level changes. Using a new global glacioeustatic curve developed by Miller and associates we show that there were > 58 rapid sea-level rises of > 40 m in the last 5 Myr that would have resulted in significant faunal compression and local population extirpation in the narrow central and northern parts of the peninsula. This new global sea-level curve appears to account for the observed patterns of the latitudinal diversity of mammal species, the concentration of species range limits north and south of this area, the nature and position of the transition between biogeographical subregions, and possibly the divergence of the faunas themselves during the Neogene. The decline of species diversity at the southern end of the transect is attributed to a peninsula effect similar to that described elsewhere. [source]

    Can the cause of aggregation be inferred from species distributions?

    OIKOS, Issue 1 2007
    Astrid J.A. Van Teeffelen
    Species distributions often show an aggregated pattern, which can be due to a number of endo- and exogenous factors. While autologistic models have been used for modelling such data with statistical rigour, little emphasis has been put on disentangling potential causes of aggregation. In this paper we ask whether it is possible to infer sources of aggregation in species distributions from a single set of occurrence data by comparing the performance of various autologistic models. We create simulated data sets, which show similar occupancy patterns, but differ in the process that causes the aggregation. We model the distribution of these data with various autologistic models, and show how the relative performance of the models is sensitive to the factor causing aggregation in the data. This information can be used when modelling real species data, where causes of aggregation are typically unknown. To illustrate, we use our approach to assess the potential causes of aggregation in data of seven bird species with contrasting statistical patterns. Our findings have important implications for conservation, as understanding the mechanisms that drive population fluctuations in space and time is critical for the development of effective management actions for long-term conservation. [source]

    Why We Need Megareserves in Amazonia

    CONSERVATION BIOLOGY, Issue 3 2005
    CARLOS A. PERES
    I consider several large-scale issues in biodiversity conservation planning (e.g., resource extraction, large areas needed for top predators, species migration, fire, and carbon sequestration) in light of our severely deficient understanding of basinwide patterns of species distribution and little-known Amazonian biota. The long-term persistence of this biota is best served by strictly protected and sustainable development forest reserves that are both embedded in a benign forest matrix and sufficiently large to support a full complement of species and landscape-scale ecological processes. Given rapidly accelerating trends in agricultural frontier expansion into previously unclaimed public lands, protection and controlled development of forests is urgent. Resumen:,La Amazonía brasileña enfrenta una de las mayores amenazas y oportunidades para la conservación de la biodiversidad tropical de nuestros tiempos. Considero varios aspectos de planificación de conservación de biodiversidad a gran escala (e. g. extracción de recursos, áreas extensas para depredadores mayores, migración de especies, fuego y secuestro de carbono) a la luz de nuestro entendimiento severamente deficiente de patrones de distribución de especies a nivel cuenca y de la poco conocida biota Amazónica. La persistencia a largo plazo de esta biota es favorecida por la protección estricta y por reservas forestales de desarrollo sustentable que estén embebidas en una matriz forestal benigna y que sean suficientemente extensas para sostener a un complemento completo de especies y procesos ecológicos a nivel paisaje. La protección y desarrollo controlado de bosques es urgente debido a la rápida aceleración de las tendencias en la expansión de la frontera agrícola hacia terrenos públicos no reclamados. [source]

    Correlative and mechanistic models of species distribution provide congruent forecasts under climate change

    CONSERVATION LETTERS, Issue 3 2010
    Michael R. Kearney
    Abstract Good forecasts of climate change impacts on extinction risks are critical for effective conservation management responses. Species distribution models (SDMs) are central to extinction risk analyses. The reliability of predictions of SDMs has been questioned because models often lack a mechanistic underpinning and rely on assumptions that are untenable under climate change. We show how integrating predictions from fundamentally different modeling strategies produces robust forecasts of climate change impacts on habitat and population parameters. We illustrate the principle by applying mechanistic (Niche Mapper) and correlative (Maxent, Bioclim) SDMs to predict current and future distributions and fertility of an Australian gliding possum. The two approaches make congruent, accurate predictions of current distribution and similar, dire predictions about the impact of a warming scenario, supporting previous correlative-only predictions for similar species. We argue that convergent lines of independent evidence provide a robust basis for predicting and managing extinctions risks under climate change. [source]

    Predicting the impact of climate change on Australia's most endangered snake, Hoplocephalus bungaroides

    DIVERSITY AND DISTRIBUTIONS, Issue 1 2010
    Trent D. Penman
    Abstract Aim, To predict how the bioclimatic envelope of the broad-headed snake (BHS) (Hoplocephalus bungaroides) may be redistributed under future climate warming scenarios. Location, South-eastern New South Wales, Australia. Methods, We used 159 independent locations for the species and 35 climatic variables to model the bioclimatic envelope for the BHS using two modelling approaches , Bioclim and Maxent. Predictions were made under current climatic conditions and we also predicted the species distribution under low and high climate change scenarios for 2030 and 2070. Results, Broad-headed snakes currently encompass their entire bioclimatic envelope. Both modelling approaches predict that suitable climate space for BHS will be lost to varying degrees under both climate warming scenarios, and under the worst case, only 14% of known snake populations may persist. Main conclusions, Areas of higher elevation within the current range will be most important for persistence of this species because they will remain relatively moist and cool even under climate change and will match the current climate envelope. Conservation efforts should focus on areas where suitable climate space may persist under climate warming scenarios. Long-term monitoring programs should be established both in these areas and where populations are predicted to become extirpated, so that we can accurately determine changes in the distribution of this species throughout its range. [source]

    The transferability of distribution models across regions: an amphibian case study

    DIVERSITY AND DISTRIBUTIONS, Issue 3 2009
    Flavio Zanini
    ABSTRACT Aim, Predicting species distribution is of fundamental importance for ecology and conservation. However, distribution models are usually established for only one region and it is unknown whether they can be transferred to other geographical regions. We studied the distribution of six amphibian species in five regions to address the question of whether the effect of landscape variables varied among regions. We analysed the effect of 10 variables extracted in six concentric buffers (from 100 m to 3 km) describing landscape composition around breeding ponds at different spatial scales. We used data on the occurrence of amphibian species in a total of 655 breeding ponds. We accounted for proximity to neighbouring populations by including a connectivity index to our models. We used logistic regression and information-theoretic model selection to evaluate candidate models for each species. Location, Switzerland. Results, The explained deviance of each species' best models varied between 5% and 32%. Models that included interactions between a region and a landscape variable were always included in the most parsimonious models. For all species, models including region-by-landscape interactions had similar support (Akaike weights) as models that did not include interaction terms. The spatial scale at which landscape variables affected species distribution varied from 100 m to 1000 m, which was in agreement with several recent studies suggesting that land use far away from the ponds can affect pond occupancy. Main conclusions, Different species are affected by different landscape variables at different spatial scales and these effects may vary geographically, resulting in a generally low transferability of distribution models across regions. We also found that connectivity seems generally more important than landscape variables. This suggests that metapopulation processes may play a more important role in species distribution than habitat characteristics. [source]

    How does the knowledge about the spatial distribution of Iberian dung beetle species accumulate over time?

    DIVERSITY AND DISTRIBUTIONS, Issue 6 2007
    Jorge M. Lobo
    ABSTRACT Different distribution maps can be obtained for the same species if localities where species are present are mapped at different times. We analysed the accumulation of information over time for a group of dung beetle species in the Iberian Peninsula. To do this, we used all available information about the distribution of the group as well as data on selected species to examine if the process of discovery of species distribution has occurred in a climatically or spatially structured fashion. Our results show the existence of a well-defined pattern of temporal growth in distributional information; due to this, the date of capture of each specimen can be explained by the environmental and spatial variables associated to the collection sites. We hypothesize that such temporal biases could be the rule rather than the exception in most distributional data. These biases could affect the weighting of environmental factors that influence species distributions, as well as the accuracy of predictive distribution models. Systematic surveys should be a priority for the description of species geographical ranges in order to make robust predictions about the consequences of habitat and climate change for their persistence and conservation. [source]

    The role of environmental gradients in non-native plant invasion into burnt areas of Yosemite National Park, California

    DIVERSITY AND DISTRIBUTIONS, Issue 2 2006
    Rob Klinger
    ABSTRACT Fire is known to facilitate the invasion of many non-native plant species, but how invasion into burnt areas varies along environmental gradients is not well-understood. We used two pre-existing data sets to analyse patterns of invasion by non-native plant species into burnt areas along gradients of topography, soil and vegetation structure in Yosemite National Park, California, USA. A total of 46 non-native species (all herbaceous) were recorded in the two data sets. They occurred in all seven of the major plant formations in the park, but were least common in subalpine and upper montane conifer forests. There was no significant difference in species richness or cover of non-natives between burnt and unburnt areas for either data set, and environmental gradients had a stronger effect on patterns of non-native species distribution, abundance and species composition than burning. Cover and species richness of non-natives had significant positive correlations with slope (steepness) and herbaceous cover, while species richness had significant negative correlations with elevation, the number of years post-burn, and cover of woody vegetation. Non-native species comprised a relatively minor component of the vegetation in both burnt and unburnt areas in Yosemite (percentage species = 4%, mean cover < 6.0%), and those species that did occur in burnt areas tended not to persist over time. The results indicate that in many western montane ecosystems, fire alone will not necessarily result in increased rates of invasion into burnt areas. However, it would be premature to conclude that non-native species could not affect post-fire succession patterns in these systems. Short fire-return intervals and high fire severity coupled with increased propagule pressure from areas used heavily by humans could still lead to high rates of invasion, establishment and spread even in highly protected areas such as Yosemite. [source]

    Latitudinal patterns in abundance and life-history traits of the mole crab Emerita brasiliensis on South American sandy beaches

    DIVERSITY AND DISTRIBUTIONS, Issue 2 2004
    Omar Defeo
    ABSTRACT Demographic and life-history attributes of the mole crab Emerita brasiliensis were analysed along 2700 km of the Atlantic coast of South America, including sandy beaches at the southernmost limit (Uruguay) and at the core of its geographical range (Brazil). Population features varied markedly within this range and exhibited systematic geographical patterns of variation. Abundance significantly increased from temperate to subtropical beaches, and the same held true for the asymptotic weight of males. Conversely, length at maturity and asymptotic weight of females increased from subtropical to temperate beaches, being inversely related to sea water temperature. Macroecological patterns in abundance and body weight showed the first large-scale evidence of scaling of population density to body size for a sandy beach population. Mortality rates (both sexes) followed a nonlinear increase from low-density temperate beaches to high-density subtropical beaches. The effect of habitat quality and availability could explain discontinuities in the species distribution within its range, and also differential responses in life-history attributes at a local scale. Asymmetries and converse latitudinal trends between sexes suggest that there is not a single general factor determining large-scale patterns in life-history traits of this species. Our results reinforce the view that density-dependent and environmental factors operating together regulate sandy beach populations. The need to develop macroecological studies in sandy beach ecology is highlighted, as knowledge acquired from local to large spatial scales throws light on population structure and regulation mechanisms. [source]

    The role of migratory ducks in the long-distance dispersal of native plants and the spread of exotic plants in Europe

    ECOGRAPHY, Issue 6 2009
    Anne-Laure Brochet
    Little is known about the role of migratory waterfowl in the long-distance dispersal (LDD) of seeds. We studied the gut contents of 42 teals Anas crecca collected in the Camargue, southern France, and found intact seeds of 16 species. There was no relationship between the probability that a given seed species was found intact in the lower gut, and the seed hardness or size. The number of seeds found in the oesophagus and gizzard (a measure of ingestion rate) was the only significant predictor of the occurrence of intact seeds in the lower gut, so studies of waterfowl diet can be used as surrogates of dispersal potential. In a literature review, we identified 223 seed species recorded in 25 diet studies of teal, pintail Anas acuta, wigeon A. penelope or mallard A. platyrhynchos in Europe. We considered whether limited species distribution reduces the chances that a seed can be carried to suitable habitat following LDD. Overall, 72% of plant species recorded in duck diets in southern Europe (36 of 50) were also recorded in the north, whereas 97% of species recorded in duck diets in the north (137 of 141) were also recorded in the south. This suggests a great potential for LDD, since most dispersed plants species occur throughout the migratory range of ducks. Migratory ducks are important vectors for both terrestrial and aquatic plant species, even those lacking the fleshy fruits or hooks typically used to identify seeds dispersed by birds. Finally, we show ducks are important vectors of exotic plant species. We identified 14 alien to Europe and 44 native to Europe but introduced to some European countries whose seeds have been recorded in duck diet. [source]

    Ground beetle species (Coleoptera, Carabidae) associations with land cover variables in northern England and southern Scotland

    ECOGRAPHY, Issue 4 2004
    M. D. Eyre
    Distribution data concerning 172 ground beetle species derived from 1145 pitfall trap sites in northern England and southern Scotland were used to assess the relationship between species distribution and 12 satellite-derived land cover variables at the regional scale. A number of species were strongly associated with one cover type and negatively with others. The major variation was for preferences for covers in upland or lowland parts of the region. Other distinct preferences for some species were covers such as those at the coast whilst a number of common species showed no strong preference for any cover variable. The synthesis of ground beetle species distribution and satellite-derived cover data is discussed in relation to environmental assessment and change. [source]

    Patterns of commonness and rarity in central European birds: reliability of the core-satellite hypothesis within a large scale

    ECOGRAPHY, Issue 4 2002
    David Storch
    The frequency distribution of species' area of occupancy is often bimodal, most species being either very rare or very common in terms of number of occupied sites. This pattern has been attributed to the nonlinearity associated with metapopulation dynamics of the species, but there are also other explanations comprising sampling artifact and frequency distribution of suitable habitats. We tested whether the bimodal frequency distribution of occupied squares in central European birds could be derived solely from the frequency distribution of species population sizes (i.e. the sampling artifact hypothesis) or from the spatial distribution of their preferred habitats. Both models predict high proportion of very common species, i.e. the right side of frequency distribution. Bimodality itself is well predicted by models based on random placement of individuals according to their abundances but neither model predicts the observed prevalence of rare species. Even the combined models that assume random placement of individuals within the squares with suitable habitat do not predict such a high proportion of rare species. The observed distribution is more aggregated, rare species occupying a smaller portion of suitable habitat than predicted on the basis of their abundance. The pattern is consistent with metapopulation processes involving local population extinctions. The involvement of these processes is supported by two further observations. First, species rarity is associated with significant population trend and/or location on the edge of their ranges within central Europe, both situations presumably associated with metapopulation processes. Second, suitable habitats seem to be either saturated or almost unoccupied, which is consistent with the predictions of the metapopulation model based on nonlinear dynamics of extinction and colonization. Although the habitat suitability is an important determinant of species distribution, the rarity of many species of birds within this scale of observation seems to be affected by other factors, including local population extinctions associated with fragmentation of species' habitats. [source]

    Metacommunity patterns of highly diverse stream midges: gradients, chequerboards, and nestedness, or is there only randomness?

    ECOLOGICAL ENTOMOLOGY, Issue 5 2005
    Jani Heino
    Abstract., 1.,Several non-random patterns in the distribution of species have been observed, including Clementsian gradients, Gleasonian gradients, nestedness, chequerboards, and evenly spaced gradients. Few studies have examined these patterns simultaneously, although they have often been studied in isolation and contrasted with random distribution of species across sites. 2.,This study examined whether assemblages of chironomid midges exhibit any of the idealised distribution patterns as opposed to random distribution of species across sites within the metacommunity context in a boreal drainage system. Analyses were based on stream surveys conducted during three consecutive years. Analytical approaches included ordinations, cluster analysis, null models, and associated randomisation methods. 3.,Midge assemblages did not conform to Clementsian gradients, which was evidenced by the absence of clearly definable assemblage types with numerous species exclusive to each assemblage type. Rather, there were signs of continuous Gleasonian variability of assemblage composition, as well as significant nested subset patterns of species distribution. 4.,Midge assemblages showed only weak relationships with any of the measured environmental variables, and even these weak environmental relationships varied among years. 5.,Midge assemblages did not appear to be structured by competition. This finding was somewhat problematic, however, because the two indices measuring co-occurrence provided rather different signs of distribution patterns. This was probably a consequence of how they actually measure co-occurrence. 6.,Although midge assemblages did not show a perfect match with any of the idealised distribution patterns, they nevertheless showed a resemblance to the empirical patterns found previously for several plant and animal groups. [source]

    Niche breadth, competitive strength and range size of tree species: a trade-off based framework to understand species distribution

    ECOLOGY LETTERS, Issue 2 2006
    Xavier Morin
    Abstract Understanding the mechanisms causing latitudinal gradients in species richness and species range size is a central issue in ecology, particularly in the current context of global climate change. Different hypotheses have been put forward to explain these patterns, emphasizing climatic variability, energy availability and competition. Here we show, using a comparative analysis controlling for phylogeny on 234 temperate/boreal tree species, that these hypotheses can be included into a single framework in an attempt to explain latitudinal gradients in species range size. We find that species tend to have larger ranges when (i) closer to the poles, (ii) successionally seral, (iii) having small and light seeds, and (iv) having short generations. The patterns can simply be explained by energy constraints associated with different life-history strategies. Overall, these findings shed a new light on our understanding of species distribution and biodiversity patterns, bringing new insights into underlying large-scale evolutionary processes. [source]

    Predicting species distribution: offering more than simple habitat models

    ECOLOGY LETTERS, Issue 9 2005
    Antoine Guisan
    Abstract In the last two decades, interest in species distribution models (SDMs) of plants and animals has grown dramatically. Recent advances in SDMs allow us to potentially forecast anthropogenic effects on patterns of biodiversity at different spatial scales. However, some limitations still preclude the use of SDMs in many theoretical and practical applications. Here, we provide an overview of recent advances in this field, discuss the ecological principles and assumptions underpinning SDMs, and highlight critical limitations and decisions inherent in the construction and evaluation of SDMs. Particular emphasis is given to the use of SDMs for the assessment of climate change impacts and conservation management issues. We suggest new avenues for incorporating species migration, population dynamics, biotic interactions and community ecology into SDMs at multiple spatial scales. Addressing all these issues requires a better integration of SDMs with ecological theory. [source]

    On the relationship between niche and distribution

    ECOLOGY LETTERS, Issue 4 2000
    H.R. Pulliam
    Applications of Hutchinson's n -dimensional niche concept are often focused on the role of interspecific competition in shaping species distribution patterns. In this paper, I discuss a variety of factors, in addition to competition, that influence the observed relationship between species distribution and the availability of suitable habitat. In particular, I show that Hutchinson's niche concept can be modified to incorporate the influences of niche width, habitat availability and dispersal, as well as interspecific competition per se. I introduce a simulation model called NICHE that embodies many of Hutchinson's original niche concepts and use this model to predict patterns of species distribution. The model may help to clarify how dispersal, niche size and competition interact, and under what conditions species might be common in unsuitable habitat or absent from suitable habitat. A brief review of the pertinent literature suggests that species are often absent from suitable habitat and present in unsuitable habitat, in ways predicted by theory. However, most tests of niche theory are hampered by inadequate consideration of what does and does not constitute suitable habitat. More conclusive evidence for these predictions will require rigorous determination of habitat suitability under field conditions. I suggest that to do this, ecologists must measure habitat specific demography and quantify how demographic parameters vary in response to temporal and spatial variation in measurable niche dimensions. [source]

    Nanocrystallized Al92Sm8 Amorphous Alloy Investigated by High-Resolution Microscopy and 3D Atom-Probe Analysis

    ADVANCED ENGINEERING MATERIALS, Issue 3 2007
    T. Gloriant
    A partially nanocrystallized amorphous Al92Sm8 (at.%) alloy was obtained directly by rapid solidification (one-step method). Because of the significant retained plasticity of the as-quenched alloy, the nanostructure and the atomic species distribution within the nanocomposite material could be characterized by field-ion microscopy (FIM) and by three-dimensional atom-probe analysis (3DAP). [source]

    Trichoderma biodiversity in China: Evidence for a North to South distribution of species in East Asia

    FEMS MICROBIOLOGY LETTERS, Issue 2 2005
    Chu-long Zhang
    Abstract Towards assessing the biodiversity and biogeography of Trichoderma, we have analyzed the occurrence of Trichoderma species in soil and litter from four areas in China: North (Hebei province), South-East (Zhejiang province), West (Himalayan, Tibet) and South-West (Yunnan province). One hundred and thirty five isolates were grouped according to tentative morphological identification. A representative 64 isolates were verified at the species level by the oligonucleotide barcode program TrichO Key v.1.0 and the custom BLAST server Tricho BLAST, using sequences of the ITS1 and 2 region of the rRNA cluster and from the longest intron of the tef1 (translation elongation factor 1-,) gene. Eleven known species (Trichoderma asperellum, T. koningii, T. atroviride, T. viride, T. velutinum, T. cerinum, T. virens, T. harzianum, T. sinensis, T. citrinoviride, T. longibrachiatum) and two putative new species (T. sp. C1, and T. sp. C2), distinguished from known species both by morphological characters and phylogenetic analysis, were identified. A significant difference in the occurrence of these species was found between the North (Hebei) and South-West (Yunnan) areas, which correlates with previously reported species distributions in Siberia and South-East Asia, respectively. As in previous studies, T. harzianum accounted for almost half of the biodiversity; although, in this study, it was exclusively found in the North, and was predominantly represented by an ITS1 and 2 haplotype, which has so far been rarely found elsewhere. This study therefore reveals a North,South gradient in species distribution in East Asia, and identifies Northern China as a potential center of origin of a unique haplotype of T. harzianum. [source]

    Development of fish-based methods for the assessment of ecological status in English and Welsh rivers

    FISHERIES MANAGEMENT & ECOLOGY, Issue 6 2007
    R. A. A. NOBLE
    Abstract, This paper outlines the derivation of spatially-based models for fish-based assessment of the ecological status of rivers in England and Wales. The analysis highlights the key steps in the approach to develop such tools. For each step a number of alternative approaches were tested, and for each approach the major limitations and problems identified. This development of a multi-metric index in England and Wales indicated that, whilst the approach does provide promising results for the future, at this stage index development is constrained by limited data for some parts of the analysis. These mainly relate to coping with the zoogeographical influence of species distribution in a descriptive river typology, the availability of data for variables that adequately predict reference fish community types for impacted sites and availability of sufficient sites at a range of ecological conditions with which to test metrics and build an index that can be used to support implementation of the European Union Water Framework Directive. [source]

    Lake depth rather than fish planktivory determines cladoceran community structure in Faroese lakes , evidence from contemporary data and sediments

    FRESHWATER BIOLOGY, Issue 11 2006
    SUSANNE LILDAL AMSINCK
    Summary 1. This study describes the environmental conditions and cladoceran community structure of 29 Faroese lakes with special focus on elucidating the impact of fish planktivory. In addition, long-term changes in biological structure of the Faroese Lake Heygsvatn are investigated. 2. Present-day species richness and community structure of cladocerans were identified from pelagial snapshot samples and from samples of surface sediment (0,1 cm). Multivariate statistical methods were applied to explore cladoceran species distribution relative to measured environmental variables. For Lake Heygsvatn, lake development was inferred by cladoceran-based paleolimnological investigations of a 14C-dated sediment core covering the last ca 5700 years. 3. The 29 study lakes were overall shallow, small-sized, oligotrophic and dominated by brown trout (Salmo trutta). Cladoceran species richness was overall higher in the surface sediment samples than in the snapshot samples. 4. Fish abundance was found to be of only minor importance in shaping cladoceran community and body size structure, presumably because of predominance of the less efficient zooplanktivore brown trout. 5. Canonical correspondence analysis showed maximum lake depth (Zmax) to be the only significant variable in explaining the sedimentary cladoceran species (18 cladoceran taxa, two pelagic, 16 benthic) distribution. Multivariate regression trees revealed benthic taxa to dominate in lakes with Zmax < 4.8 m and pelagic taxa to dominate when Zmax was > 4.8 m. 6. Predictive models to infer Zmax were developed using variance weighted-averaging procedures. These were subsequently applied to subfossil cladoceran assemblages identified from a 14C-dated sediment core from Lake Heygsvatn and showed inferred Zmax to correspond well to the present-day lake depth. A recent increase in inferred Zmax may, however, be an artefact induced by, for instance, eutrophication. [source]

    Assembly rules and community models for unicellular organisms: patterns in diatoms of boreal streams

    FRESHWATER BIOLOGY, Issue 4 2005
    JANI HEINO
    Summary 1. Many studies have addressed either community models (e.g. Clementsian versus Gleasonian gradients) or assembly rules (e.g. nestedness, checkerboards) for higher plant and animal communities, but very few studies have examined different non-random distribution patterns simultaneously with the same data set. Even fewer studies have addressed generalities in the distribution patterns of unicellular organisms, such as diatoms. 2. We studied non-randomness in the spatial distribution and community composition of stream diatoms. Our data consisted of diatom surveys from 47 boreal headwater streams and small rivers in northern Finland. Our analytical approaches included ordinations, cluster analysis, null model analyses, and associated randomisation tests. 3. Stream diatom communities did not follow discrete Clementsian community types, where multiple species occur exclusively in a single community type. Rather, diatom species showed rather individualistic responses, leading to continuous Gleasonian variability in community composition. 4. Although continuous variability was the dominating pattern in the data, diatoms also showed significant nestedness and less overlap in species distribution than expected by chance. However, these patterns were probably only secondary signals from species' individualistic responses to the environment. 5. Although unicellular organisms, such as diatoms, differ from multicellular organisms in several biological characteristics, they nevertheless appear to show largely similar non-random distribution patterns previously found for higher plants and metazoans. [source]

    Use of response functions in selecting lodgepole pine populations for future climates

    GLOBAL CHANGE BIOLOGY, Issue 12 2006
    T. WANG
    Abstract Although growth response functions have previously been developed for lodgepole pine (Pinus contorta Dougl. ex Loud.) populations in British Columbia, new analyses were conducted: (1) to demonstrate the merit of a new local climate model in genecological analysis; (2) to highlight new methods for deriving response functions; and (3) to evaluate the impacts of management options for existing geographically defined seed planning units (SPUs) for reforestation. Results of this study suggest that new methods for anchoring population response functions, and a multivariate approach for incorporating climate variables into a single model, considerably improve the reliability of these functions. These functions identified a small number of populations in central areas of the species distribution with greater growth potential over a wide range of mean annual temperature (MAT). Average productivity of lodgepole pine is predicted to increase (up to 7%) if moderate warming (,2°C MAT) occurs in the next few decades as predicted, although productivity would substantially decline in some SPUs in southern BC. Severe global warming (>3°C MAT) would result in either a drastic decline in productivity or local populations being extirpated in southern SPUs. New deployment strategies using the best seed sources for future reforestation may not only be able to mitigate the negative impact of global warming, but may even be able to increase productivity in some areas. [source]

    Rapid climate change-related growth decline at the southern range edge of Fagus sylvatica

    GLOBAL CHANGE BIOLOGY, Issue 11 2006
    ALISTAIR S. JUMP
    Abstract Studies on Fagus sylvatica show that growth in populations toward the southern limit of this species' distribution is limited strongly by drought. Warming temperatures in the Mediterranean region are expected to exacerbate drought where they are not accompanied by increases in precipitation. We studied levels of annual growth in mature F. sylvatica trees over the last half-century in the Montseny Mountains in Catalonia (northeast Spain). Our results show significantly lower growth of mature trees at the lower limit of this species' distribution when compared with trees at higher altitudes. Growth at the lower Fagus limit is characterized by a rapid recent decline starting in approximately 1975. By 2003, growth of mature trees had fallen by 49% when compared with predecline levels. This is not an age-related phenomenon, nor is it seen in comparable populations at higher altitudes. Analysis of climate-growth relationships suggests that the observed decline in growth is a result of warming temperatures and that, as precipitation in the region has not increased, precipitation is now insufficient to ameliorate the negative effects of increased temperatures on tree growth. As the climate-response of the studied forest is comparable with that of F. sylvatica forests in other southern European regions, it is possible that this growth decline is a more widespread phenomenon. Warming temperatures may lead to a rapid decline in the growth of range-edge populations and a consequent retreat of the species distribution in southern Europe. Assessment of long-term growth trends across the southern range edge of F. sylvatica therefore merits further attention. [source]

    A global study of relationships between leaf traits, climate and soil measures of nutrient fertility

    GLOBAL ECOLOGY, Issue 2 2009
    Jenny C. Ordoñez
    ABSTRACT Aim This first global quantification of the relationship between leaf traits and soil nutrient fertility reflects the trade-off between growth and nutrient conservation. The power of soils versus climate in predicting leaf trait values is assessed in bivariate and multivariate analyses and is compared with the distribution of growth forms (as a discrete classification of vegetation) across gradients of soil fertility and climate. Location All continents except for Antarctica. Methods Data on specific leaf area (SLA), leaf N concentration (LNC), leaf P concentration (LPC) and leaf N:P were collected for 474 species distributed across 99 sites (809 records), together with abiotic information from each study site. Individual and combined effects of soils and climate on leaf traits were quantified using maximum likelihood methods. Differences in occurrence of growth form across soil fertility and climate were determined by one-way ANOVA. Results There was a consistent increase in SLA, LNC and LPC with increasing soil fertility. SLA was related to proxies of N supply, LNC to both soil total N and P and LPC was only related to proxies of P supply. Soil nutrient measures explained more variance in leaf traits among sites than climate in bivariate analysis. Multivariate analysis showed that climate interacted with soil nutrients for SLA and area-based LNC. Mass-based LNC and LPC were determined mostly by soil fertility, but soil P was highly correlated to precipitation. Relationships of leaf traits to soil nutrients were stronger than those of growth form versus soil nutrients. In contrast, climate determined distribution of growth form more strongly than it did leaf traits. Main conclusions We provide the first global quantification of the trade-off between traits associated with growth and resource conservation ,strategies' in relation to soil fertility. Precipitation but not temperature affected this trade-off. Continuous leaf traits might be better predictors of plant responses to nutrient supply than growth form, but growth forms reflect important aspects of plant species distribution with climate. [source]

    Threshold response of Madagascar's littoral forest to sea-level rise

    GLOBAL ECOLOGY, Issue 1 2009
    Malika Virah-Sawmy
    ABSTRACT Aim, Coastal biodiversity hotspots are globally threatened by sea-level rise. As such it is important to understand how ecosystems resist, respond and adapt to sea-level rise. Using pollen, geochemistry, charcoal and diatom records in conjunction with previously published palaeoclimatic records, we investigated the mechanism, interactions and ecosystem response and resilience of Madagascar's littoral forest to late Holocene sea-level rise. Location, Sediment sequences were collected along the south-east coast of Madagascar in two adjacent habitats in Mandena; the highly diverse littoral forest fragment and species-poor Erica -matrix. Methods, We used a multi-proxy approach to investigate the relative influence of environmental changes on the littoral ecosystem. We reconstructed past vegetation and fire dynamics over the past 6500 years at two sites in the littoral forest using fossil pollen and macrofossil charcoal contained in sedimentary sequences. Alongside these records we reconstructed past marine transgressions from the same sedimentary sequences using geochemical analyses, and a salinity and drought index through the analysis of fossil diatoms. Results, Our findings indicated that it was the synergistic effect of sea-level rise coupled with rainfall deficits that triggered a threshold event with a switch from two types of littoral forest (an open Uapaca forest and a closed littoral forest fragment) to an Erica,Myrica heath/grassland occurring in approximately less than 100 years. Resilience to sea-level rise differed in the two adjacent habitats, suggesting that the littoral forest fragment was more resilient to the impacts of sea-level change and aridity than the open Uapaca woodland. Conclusions, We demonstrated that the littoral ecosystem was influenced by late Holocene sea-level rise and climatic desiccation. While climate change-integrated conservation strategies address the effects of climate change on species distribution and dispersal, our work suggests that more attention should be paid to the impacts of interactive climatic variables that affect ecosystem thresholds. [source]

    Reconstructing the demise of Tethyan plants: climate-driven range dynamics of Laurus since the Pliocene

    GLOBAL ECOLOGY, Issue 6 2008
    Francisco Rodríguez-Sánchez
    ABSTRACT Aim Climate changes are thought to be responsible for the retreat and eventual extinction of subtropical lauroid species that covered much of Europe and North Africa during the Palaeogene and early Neogene; little is known, however, of the spatial and temporal patterns of this demise. Herein we calibrate ecological niche models to assess the climatic requirements of Laurus L. (Lauraceae), an emblematic relic from the Tethyan subtropical flora, subsequently using these models to infer how the range dynamics of Laurus were affected by Plio-Pleistocene climate changes. We also provide predictions of likely range changes resulting from future climatic scenarios. Location The Mediterranean Basin and Macaronesian islands (Canaries, Madeira, Azores). Methods We used a maximum-entropy algorithm (Maxent) to model the relationship between climate and Laurus distribution over time. The models were fitted both to the present and to the middle Pliocene, based on fossil records. We employed climatic reconstructions for the mid-Pliocene (3 Ma), the Last Glacial Maximum (21 ka) and a CO2 -doubling future scenario to project putative species distribution in each period. We validated the model projections with Laurus fossil and present occurrences. Results Laurus preferentially occupied warm and moist areas with low seasonality, showing a marked stasis of its climatic niche. Models fitted to Pliocene conditions successfully predicted the current species distribution. Large suitable areas existed during the Pliocene, which were strongly reduced during the Pleistocene, but humid refugia within the Mediterranean Basin and Macaronesian islands enabled long-term persistence. Future climate conditions are likely to re-open areas suitable for colonization north of the current range. Main conclusions The climatic requirements of Laurus remained virtually unchanged over the last 3 Myr. This marked niche conservatism imposed largely deterministic range dynamics driven by climate conditions. This species's relatively high drought tolerance might account for the survival of Laurus in continental Europe throughout the Quaternary whilst other Lauraceae became extinct. Climatic scenarios for the end of this century would favour an expansion of the species's range towards northern latitudes, while severely limiting southern populations due to increased water stress. [source]

    Spatial patterns of simulated transpiration response to climate variability in a snow dominated mountain ecosystem

    HYDROLOGICAL PROCESSES, Issue 18 2008
    Lindsey Christensen
    Abstract Transpiration is an important component of soil water storage and stream-flow and is linked with ecosystem productivity, species distribution, and ecosystem health. In mountain environments, complex topography creates heterogeneity in key controls on transpiration as well as logistical challenges for collecting representative measurements. In these settings, ecosystem models can be used to account for variation in space and time of the dominant controls on transpiration and provide estimates of transpiration patterns and their sensitivity to climate variability and change. The Regional Hydro-Ecological Simulation System (RHESSys) model was used to assess elevational differences in sensitivity of transpiration rates to the spatiotemporal variability of climate variables across the Upper Merced River watershed, Yosemite Valley, California, USA. At the basin scale, predicted annual transpiration was lowest in driest and wettest years, and greatest in moderate precipitation years (R2 = 0·32 and 0·29, based on polynomial regression of maximum snow depth and annual precipitation, respectively). At finer spatial scales, responsiveness of transpiration rates to climate differed along an elevational gradient. Low elevations (1200,1800 m) showed little interannual variation in transpiration due to topographically controlled high soil moistures along the river corridor. Annual conifer stand transpiration at intermediate elevations (1800,2150 m) responded more strongly to precipitation, resulting in a unimodal relationship between transpiration and precipitation where highest transpiration occurred during moderate precipitation levels, regardless of annual air temperatures. Higher elevations (2150,2600 m) maintained this trend, but air temperature sensitivities were greater. At these elevations, snowfall provides enough moisture for growth, and increased temperatures influenced transpiration. Transpiration at the highest elevations (2600,4000 m) showed strong sensitivity to air temperature, little sensitivity to precipitation. Model results suggest elevational differences in vegetation water use and sensitivity to climate were significant and will likely play a key role in controlling responses and vulnerability of Sierra Nevada ecosystems to climate change. Copyright © 2008 John Wiley & Sons, Ltd. [source]