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Species Assemblages (species + assemblage)
Selected AbstractsIncreasing representation of localized dung beetles across a chronosequence of regenerating vegetation and natural dune forest in South AfricaGLOBAL ECOLOGY, Issue 3 2002Adrian L. V. Davis Abstract Aim Species assemblages with high proportions of localized taxa occur in regional islands with a history of strong eco-climatic separation from adjacent systems. Current disturbance in such islands of relictualism or endemism disrupts the distinctive local character in favour of regionally distributed taxa with a wider range of tolerances. However, rehabilitation of the system should restore the localized biota. Thus, we used biogeographical composition to assess progress towards restoration of the dung beetle fauna associated with such an island of endemism following dredge-mining. Location The study was conducted in natural coastal dune forest and a 23-year chronosequence of regenerating dune vegetation in the Maputaland centre of endemism, KwaZulu-Natal, South Africa. Methods Dung beetles were trapped in eight stands of regenerating vegetation of different ages (< 1 year to ~21 years) and in four stands of natural dune forest with differing ecological characteristics defined by measurements of vegetative physiognomy and microclimate. Species groups defined from multivariate analysis of biogeographical distribution patterns and vegetation associations were used to demonstrate quantitative compositional changes in the dung beetle assemblages across the chronosequence to natural forest. Results Three biogeographical groups were defined. One group comprised species widespread in southern Africa or both southern and east Africa. The other two groups were endemic, one to the east coast and the other to Maputaland. There was a general trend from dominance by regionally distributed dung beetle taxa to dominance by locally distributed taxa across the chronosequence of regenerating vegetation from grassland, to open Acacia karroo thicket, to dense A. karroo- dominated woodland. However, this trend was linked closely to the relative physiognomic and microclimatic similarity between the regenerating vegetation and natural forest. Thus, proportions of locally distributed taxa were lower in older chronosequence woodland (~18,~21 years) with its low canopy cover and open understorey than in dense early chronosequence woodland (~9,~12 years), which is physiognomically and microclimatically closer to species-diverse natural forest with its dense canopy and understorey. Overall, the present dung beetle community comprises five species groups. Single widespread (21 spp.) and endemic groups (14 spp.) showed similar patterns of association with early chronosequence grassland and open thicket stands. A single widespread (3 spp.) and two endemic shade-associated groups (3 and 11 spp.) showed differing patterns of association centred, respectively, in late chronosequence woodland, natural forest, or all shaded stands. Main conclusions At 23 years, vegetative regeneration is still at an early stage, but abundant activity of most, although not all species recorded in natural forest, is recovered with the closure of the woodland canopy at ~9 years. Compositional differences with respect to natural forest vary closely with vegetative physiognomy and its effect on the microclimate. Therefore, full compositional recovery is dependent on the re-establishment of natural forest physiognomy and microclimate. [source] Epiphytic ferns and bryophytes of Tasmanian tree-ferns: A comparison of diversity and composition between two host speciesAUSTRAL ECOLOGY, Issue 2 2005NINA R. ROBERTS Abstract Ferns, bryophytes and lichens are the most diverse groups of plants in wet forests in south-eastern Australia. However, management of this diversity is limited by a lack of ecological knowledge of these groups and the difficulty in identifying species for non-experts. These problems may be alleviated by the identification and characterization of suitable proxies for this diversity. Epiphytic substrates are potential proxies. To evaluate the significance of some epiphytic substrates, fern and bryophyte assemblages on a common tree-fern species, Dicksonia antarctica (soft tree-fern), were compared with those on a rare species, Cyathea cunninghamii (slender tree-fern), in eastern Tasmania, Australia. A total of 97 fern and bryophyte species were recorded on D. antarctica from 120 trunks at 10 sites, and 64 species on C. cunninghamii from 39 trunks at four of these sites. The trunks of C. cunninghamii generally supported fewer species than D. antarctica, but two mosses (particularly Hymenodon pilifer) and one liverwort showed significant associations with this host. Several other bryophytes and epiphytic ferns showed an affinity for the trunks of D. antarctica. Species assemblages differed significantly between both sites and hosts, and the differences between hosts varied significantly among sites. The exceptionally high epiphytic diversity associated with D. antarctica suggests that it plays an important ecological role in Tasmanian forests. Evidently C. cunninghamii also supports a diverse suite of epiphytes, including at least one specialist species. [source] The role of oceanographic conditions and plankton availability in larval fish assemblages off the Catalan coast (NW Mediterranean)FISHERIES OCEANOGRAPHY, Issue 3 2010M. PILAR OLIVAR Abstract In the northwestern Mediterranean, most fish species reproduce in early summer and fewer in the autumn mixing period. This study analyses and compares larval fish assemblages (LFA) in both seasons, and is the first attempt to characterize LFA structure for the autumn period. We analyze horizontal and vertical distribution of fish larvae and the micro- and mesozooplankton biomass and abundance of the main zooplankton groups. The oceanographic situation was analyzed through the study of data from CTD, N,-Shuttle and ADCP surveys. LFA were determined by ordination analyses based on larval abundance, and the relationships between larval assemblages and environmental variables were investigated through canonical correspondence analysis. The importance of some hydrographic variables (temperature, salinity and stability of the water column), current fields (along-shelf and across-shelf transport) and the abundance of zooplankton are discussed as important factors shaping the structure of larval assemblages. In early summer, LFA were mainly structured by a combination of bathymetry and trophic components, although sea surface temperature also played a role in shaping the horizontal larval distributions. In autumn, trophic variables were the main factors influencing the shelf-dwelling species assemblage. Larvae of oceanic species, on the other hand, were not related to trophic variables but were more affected by current fields. [source] Patterns of ant species richness along elevational gradients in an arid ecosystemGLOBAL ECOLOGY, Issue 2 2003Nathan J. Sanders ABSTRACT Aim In this study, we examine patterns of local and regional ant species richness along three elevational gradients in an arid ecosystem. In addition, we test the hypothesis that changes in ant species richness with elevation are related to elevation-dependent changes in climate and available area. Location Spring Mountains, Nevada, U.S.A. Methods We used pitfall traps placed at each 100-m elevational band in three canyons in the Spring Mountains. We compiled climate data from 68 nearby weather stations. We used multiple regression analysis to examine the effects of annual precipitation, average July precipitation, and maximum and minimum July temperature on ant species richness at each elevational band. Results We found that patterns of local ant species richness differed among the three gradients we sampled. Ant species richness increased linearly with elevation along two transects and peaked at mid-elevation along a third transect. This suggests that patterns of species richness based on data from single transects may not generalize to larger spatial scales. Cluster analysis of community similarity revealed a high-elevation species assemblage largely distinct from that of lower elevations. Major changes in the identity of ant species present along elevational gradients tended to coincide with changes in the dominant vegetation. Regional species richness, defined here as the total number of unique species within an elevational band in all three gradients combined, tended to increase with increasing elevation. Available area decreased with increasing elevation. Area was therefore correlated negatively with ant species richness and did not explain elevational patterns of ant species richness in the Spring Mountains. Mean July maximum and minimum temperature, July precipitation and annual precipitation combined to explain 80% of the variation in ant species richness. Main conclusions Our results suggest that in arid ecosystems, species richness for some taxa may be highest at high elevations, where lower temperatures and higher precipitation may support higher levels of primary production and cause lower levels of physiological stress. [source] Floristic biogeography of the Hawaiian Islands: influences of area, environment and paleogeographyJOURNAL OF BIOGEOGRAPHY, Issue 3 2004Jonathan P. Price Abstract Aim, A detailed database of distributions and phylogenetic relationships of native Hawaiian flowering plant species is used to weigh the relative influences of environmental and historical factors on species numbers and endemism. Location, The Hawaiian Islands are isolated in the North Pacific Ocean nearly 4000 km from the nearest continent and nearly as distant from the closest high islands, the Marquesas. The range of island sizes, environments, and geological histories within an extremely isolated archipelago make the Hawaiian Islands an ideal system in which to study spatial variation in species distributions and diversity. Because the biota is derived from colonization followed by extensive speciation, the role of evolution in shaping the regional species assemblage can be readily examined. Methods, For whole islands and regions of each major habitat, species,area relationships were assessed. Residuals of species,area relationships were subjected to correlation analysis with measures of endemism, isolation, elevation and island age. Putative groups of descendents of each colonist from outside the Hawaiian Islands were considered phylogenetic lineages whose distributions were included in analyses. Results, The species,area relationship is a prominent pattern among islands and among regions of each given habitat. Species number in each case correlates positively with number of endemics, number of lineages and number of species per lineage. For mesic and wet habitat regions, island age is more influential than area on species numbers, with older islands having more species, more single-island endemics, and higher species : lineage ratios than their areas alone would predict. Main conclusions, Because species numbers and endemism are closely tied to speciation in the Hawaiian flora, particularly in the most species-rich phylogenetic lineages, individual islands' histories are central in shaping their biota. The Maui Nui complex of islands (Maui, Moloka,i, L,na,i and Kaho,olawe), which formed a single large landmass during most of its history, is best viewed in terms of either the age or area of the complex as a whole, rather than the individual islands existing today. [source] Are local patterns of anthropoid primate diversity related to patterns of diversity at a larger scale?JOURNAL OF BIOGEOGRAPHY, Issue 6 2000M. J. Lawes Abstract Aims, (1) To determine the relationship between local and regional anthropoid primate species richness. (2) To establish the spatial and temporal scale at which the ultimate processes influencing patterns of primate species coexistence operate. Location Continental landmasses of Africa, South America and Asia (India to China, and all islands as far south as New Guinea). Methods, The local,regional species richness relationship for anthropoid primates is estimated by regressing local richness against regional richness (independent variable). Local richness is estimated in small, replicate local assemblages sampled in regions that vary in total species richness. A strong linear relationship is taken as evidence that local assemblages are unsaturated and local richness results from proportional sampling of the regional pool. An asymptotic curvilinear relationship is interpreted to reflect saturated communities, where strong biotic interactions limit local richness and local processes structure the species assemblage. As a further test of the assumption of local assemblage saturation, we looked for density compensation in high-density local primate assemblages. Results, The local,regional species richness relationship was linear for Africa and South America, and the slope of the relationship did not differ between the two continents. For Asia, curvilinearity best described the relationship between local and regional richness. Asian primate assemblages appear to be saturated and this is confirmed by density compensation among Asian primates. However, density compensation was also observed among African primates. The apparent assemblage saturation in Asia is not a species,area phenomenon related to the small size of the isolated islands and their forest blocks, since similar low local species richness occurs in large forests on mainland and/or peninsular Asia. Main conclusions In Africa and South America local primate assemblage composition appears to reflect the influence of biogeographic processes operating on regional spatial scales and historical time scales. In Asia the composition of primate assemblages are by-and-large subject to ecological constraint operating over a relatively small spatial and temporal scale. The possible local influence of the El Niño Southern Oscillations on the evolution and selection of life-history characteristics among Asian primates, and in determining local patterns of primate species coexistence, warrants closer inspection. [source] Gene diversity in a fragmented population of Briza media: grassland continuity in a landscape contextJOURNAL OF ECOLOGY, Issue 1 2006HONOR C. PRENTICE Summary 1We investigated patterns of allozyme variation in demes of the grass Briza media in semi-natural grassland fragments within a mosaic agricultural landscape on the Baltic island of Öland. In the study area, Briza is both a characteristic species of old pastures and an early colonizer of young grasslands developing on previously forested or arable sites. 2Generalized linear models revealed that descriptors of both present landscape structure and past grassland history are significant determinants of genetic variation in the Briza demes. Genetic structure and levels of within-deme diversity are influenced by the size of grassland fragments, the type of habitat surrounding the grasslands, the size/spatial extent of the demes, the geographic position of the demes and the historical continuity of the grassland fragments. 3Gene diversity (H) was higher in demes from grassland polygons with a high proportion of adjacent grassland, higher in the more extensive demes, and decreased northwards within the study area. 4The negative association between the inbreeding coefficient (FIS) and grassland continuity is interpreted in terms of a two-stage colonization process: recruitment into young grasslands leads initially to spatial patchiness, but subsequent selection in maturing pastures occurs within an increasingly uniform and dense sward. 5Despite a weak overall genetic structure (as indicated by Bayesian cluster analysis) the between-deme FST was significant. Linear discriminant analysis of within-deme allele frequencies grouped the demes according to the age and previous land-use history of their grassland polygons. The convergence of the allele frequency profiles in the younger grasslands towards those of the old grasslands is consistent with convergence of selective regimes as pastures mature towards an increasingly uniform, dense sward and characteristic species assemblage. 6The genetic composition of demes of a grassland species appears to be influenced by the process of plant community convergence during grassland development , complementing the recent finding that convergence of species composition in experimental assemblages of grassland plants is dependent on the genotypic composition of the component species. [source] Effect of Hydrologic Restoration and Lonicera maackii Removal on Herbaceous Understory Vegetation in a Bottomland Hardwood ForestRESTORATION ECOLOGY, Issue 3 2008Rebecca M. Swab Abstract Amur honeysuckle (Lonicera maackii (Rupr.) Herder), a large deciduous shrub from China, has invaded many forests in eastern/central United States. The species was removed by cutting and herbicide application from a recently hydrologically restored section of a bottomland hardwood forest in central Ohio, and the response of understory plants, especially herbaceous species, was measured. Plots were established in uncleared and cleared sections, and percent cover of each herbaceous understory species was estimated monthly. One season after several years of Lonicera removal efforts, no significant association was discovered between percentage of Lonicera cover and total understory species abundance. There was, however, a direct correlation between elevation and honeysuckle abundance; L. maackii abundance was negatively associated with low elevations, likely due to hydrologic factors. Plant species diversity (H) and richness (s) increased with elevation but were not significantly different on plots with honeysuckle removal (H = 0.86 ± 0.08 vs. 0.78 ± 0.09 and s = 4.4 ± 0.19 vs. 4.2 ± 0.2 species/m2, respectively) despite the fact that understory light levels measured by densiometer were significantly higher (,= 0.003) in cleared versus uncleared sections. Native and invasive species were found in similar proportions in the two sections, and significant sprouting and regrowth of L. maackii were observed throughout the cleared section. Although the removal of L. maackii altered the characteristics of the plant species assemblage, the value of this management remains questionable in the years immediately following treatment. [source] Inter-annual variability in amphibian assemblages: implications for diversity assessment and conservationAQUATIC CONSERVATION: MARINE AND FRESHWATER ECOSYSTEMS, Issue 6 2010Carola Gómez-Rodríguez Abstract 1.Diversity assessments and conservation management should take into account the dynamic nature of populations and communities, particularly when they are subject to highly variable and unpredictable environmental conditions. 2.This study evaluates the inter-annual variability in the assemblage composition (temporal turnover) of an amphibian community breeding in a highly dynamic habitat, a Mediterranean temporary pond system, during a 4-year period. 3.A comprehensive framework is provided to evaluate temporal turnover from data of a differing nature (species richness, presence/absence and relative abundance) and, especially, to discern variation in richness (species loss) from changes in the identity or abundance of species (species replacement). 4.Results show that the pond amphibian assemblages in Doñana National Park exhibited high inter-annual variability during the study period, both in the number of species, species identity and their relative abundance. This result provides evidence for the inadequacy of surveys conducted only in one breeding season to characterize the species assemblage associated with a given pond. Besides, it suggests that a given pond offers different breeding opportunities over time, being suitable for different species depending on the year. This alternation will contribute to the medium-term preservation of all species in the assemblage. 5.It is highly relevant to preserve the natural dynamism and spatial variability of temporary pond systems, which will favour the conservation of populations through their intrinsic variability. Copyright © 2010 John Wiley & Sons, Ltd. [source] Detecting climate change induced range shifts: Where and how should we be looking?AUSTRAL ECOLOGY, Issue 1 2006LUKE P. SHOO Abstract: Global climate warming is expected to cause systematic shifts in the distribution of species and consequently increase extinction risk. Conservation managers must be able to detect, measure and accurately predict range shifts in order to mitigate impacts on biodiversity. However, important responses to climate change may go unnoticed or be dismissed if we fail to collect sufficient baseline data and apply the most sensitive analytical tests. Here we use randomizations of a contemporary data set on rainforest birds of north-eastern Australia to quantify the sensitivity of three measures for assessing range shifts along altitudinal gradients. We find that smaller range shifts are detectable by analysing change in the mean altitude of presence records rather than upper or lower range boundaries. For a moderate survey effort of 96 surveys, measurements of change in the mean altitude of 34 species have the capacity to provide strong inference for a mean altitudinal range shift as small as 40 m across the species assemblage. We also show that range shifts measured at range boundaries can be potentially misleading when differences in sampling effort between contemporary and historical data sets are not taken into account. [source] Begging call matching between a specialist brood parasite and its host: a comparative approach to detect coevolutionBIOLOGICAL JOURNAL OF THE LINNEAN SOCIETY, Issue 1 2009MICHAEL G. ANDERSON Studies of avian brood parasite systems have typically investigated the mimicry of host eggs by specialist parasites. Yet, several examples of similarity between host and parasite chick appearance or begging calls suggest that the escalation of host,parasite arms races may also lead to visual or vocal mimicry at the nestling stage. Despite this, there have been no large-scale comparative studies of begging calls to test whether the similarity of host and parasite is greater than predicted by chance or phylogenetic distance within a geographically distinct species assemblage. Using a survey of the begging calls of all native forest passerines in New Zealand, we show that the begging call of the host-specialist shining cuckoo (Chrysococcyx lucidus) is most similar to that of its grey warbler (Gerygone igata) host compared to any of the other species, and that this is unlikely to have occurred by chance. Randomization tests revealed that the incorporation of the shining cuckoo's begging calls into our species-set consistently reduced the phylogenetic signal within cluster trees based on begging call similarity. By contrast, the removal of the grey warbler calls did not reduce the phylogenetic signal in the begging call similarity trees. These two results support a scenario in which coevolution of begging calls has not taken place: the begging call of the host retains its phylogenetic signal, whereas that of the parasite has changed to match that of its host. © 2009 The Linnean Society of London, Biological Journal of the Linnean Society, 2009, 98, 208,216. [source] Priority Wetland Invertebrates as Conservation SurrogatesCONSERVATION BIOLOGY, Issue 2 2010S. J. ORMEROD agua dulce; caracoles; conservación; especies paraguas; especies sustitutas; gasterópodos Abstract:,Invertebrates are important functionally in most ecosystems, but seldom appraised as surrogate indicators of biological diversity. Priority species might be good candidates; thus, here we evaluated whether three freshwater invertebrates listed in the U.K. Biodiversity Action Plan indicated the richness, composition, and conservation importance of associated wetland organisms as defined respectively by their alpha diversity, beta diversity, and threat status. Sites occupied by each of the gastropods Segmentina nitida, Anisus vorticulus, and Valvata macrostoma had greater species richness of gastropods and greater conservation importance than other sites. Each also characterized species assemblages associated with significant variations between locations in alpha or beta diversity among other mollusks and aquatic macrophytes. Because of their distinct resource requirements, conserving the three priority species extended the range of wetland types under management for nature conservation by 18% and the associated gastropod niche-space by around 33%. Although nonpriority species indicated variations in richness, composition, and conservation importance among other organisms as effectively as priority species, none characterized such a wide range of high-quality wetland types. We conclude that priority invertebrates are no more effective than nonpriority species as indicators of alpha and beta diversity or conservation importance among associated organisms. Nevertheless, conserving priority species can extend the array of distinct environments that are protected for their specialized biodiversity and environmental quality. We suggest that this is a key role for priority species and conservation surrogates more generally, and, on our evidence, can best be delivered through multiple species with contrasting habitat requirements. Resumen:,Los invertebrados son funcionalmente importantes en la mayoría de los ecosistemas, pero raramente son valorados como indicadores sustitutos de la diversidad biológica. Las especies prioritarias pueden ser buenos candidatos; por lo tanto, aquí evaluamos sí tres especies de invertebrados enlistados en el Plan de Acción para la Biodiversidad del Reino Unido eran indicadores de la riqueza, la composición e importancia para la conservación de organismos de humedal asociados definida por su diversidad alfa, diversidad beta y estatus de amenaza respectivamente. Los sitios ocupados por cada uno de los gasterópodos Segmentina nitida, Anisus vorticulus and Valvata macrostoma tuvieron una mucho mayor riqueza de gasterópodos y mayor importancia para la conservación que otros sitios. Cada uno también caracterizó a los ensambles asociados con variaciones significativas entre localidades en la diversidad alfa o entre otros moluscos y macrofitas acuáticas en la diversidad beta. Debido a sus diferentes requerimientos de recursos, la conservación de las tres especies prioritarias se amplió la extensión de todos los tipos de humedal bajo manejo para la conservación de la naturaleza en 18% y el nicho-espacio de los gasterópodos asociados se amplió alrededor de 33%. Aunque las especies no prioritarias indicaron variaciones en riqueza, composición e importancia de conservación entre otros organismos tan efectivamente como las especies prioritarias, ninguna caracterizó un rango tan amplio de humedales de alta calidad. Concluimos que los invertebrados prioritarios no son más efectivos que las especies no prioritarias como indicadores de la diversidad alfa y beta ni de la importancia para la conservación entre organismos asociados. Sin embargo, la conservación de especies prioritarias puede ampliar el conjunto de ambientes diferentes que son protegidos por su biodiversidad especializada y calidad ambiental. Sugerimos que este es un papel clave para las especies prioritarias y, más generalmente, para los sustitutos de conservación, y, con base en nuestra evidencia, puede ser desarrollado mediante múltiples especies con requerimientos de hábitat contrastantes. [source] Satellite sleuthing: does remotely sensed land-cover change signal ecological degradation in a protected area?DIVERSITY AND DISTRIBUTIONS, Issue 2 2009T. A. Waite ABSTRACT Aim, We evaluate whether remotely sensed land-cover change within a newly protected area signalled human-driven ecological degradation. Vegetation density changed in a quarter of pixels during the first 13 years (1986,1999) following the sanctuary's formal enclosure, with many patches showing a decrease in density. We use on-the-ground data collected in 2006 in 132 random plots to explore whether these changes in vegetation density reliably signalled latent shifts in local diversity of woody plants and whether they could be attributed to illicit activities including fuel wood collection and livestock grazing. Location, Kumbhalgarh Wildlife Sanctuary, Rajasthan, India. Results, Species richness, species sharing, species assemblages, and incidence of invasive and useful species were statistically similar among plots in which vegetation density had decreased, increased or remained similar. Likewise, intensity of disturbance associated with human activities was similar across these plot types. Main conclusions, Our data provide no clear evidence that local changes in vegetation density signalled latent shifts in local diversity of woody plants. They also fail to reveal any clear association between local changes in vegetation density and human-related activities. Finding no evidence that land-cover change led to biotic erosion, we reflect on the utility of resource-use bans in protected areas, particularly those embedded within historically coupled human-nature systems. [source] Prairie dog presence affects occurrence patterns of disease vectors on small mammalsECOGRAPHY, Issue 5 2008R. Jory Brinkerhoff Wildlife disease is recognized as a burgeoning threat to imperiled species and aspects of host and vector community ecology have been shown to have significant effects on disease dynamics. The black-tailed prairie dog is a species of conservation concern that is highly susceptible to plague, a flea-transmitted disease. Prairie dogs (Cynomys) alter the grassland communities in which they exist and have been shown to affect populations of small rodents, which are purported disease reservoirs. To explore potential ecological effects of black-tailed prairie dogs on plague dynamics, we quantified flea occurrence patterns on small mammals in the presence and absence of prairie dogs at 8 study areas across their geographic range. Small mammals sampled from prairie dog colonies showed significantly higher flea prevalence, flea abundance, and relative flea species richness than those sampled from off-colony sites. Successful plague transmission likely is dependent on high prevalence and abundance of fleas that can serve as competent vectors. Prairie dogs may therefore facilitate the maintenance of plague by increasing flea occurrence on potential plague reservoir species. Our data demonstrate the previously unreported ecological influence of prairie dogs on vector species assemblages, which could influence disease dynamics. [source] To what extent can management variables explain species assemblages?ECOGRAPHY, Issue 6 2004A study of carabid beetles in forests Studies concerning the influence of forest management on invertebrate communities often focus on a limited set of chosen variables and rarely quantify the importance of management as opposed to other influences. We aimed at: 1) comparing the importance for species assemblages of habitat variables defined by management with those independent of it; 2) understanding the ecological significance of the variation remaining when both management and non-management variables are used. We caught carabid beetles according to a stratified pitfall sampling based on forest structure, tree composition and stand age. Forty-nine habitat variables were measured using three spatial scales. We decomposed the variation of species assemblages with successive constrained ordinations based on sets of variables, and studied the life traits of the species least and best explained by the model including all of the variables. Forest structure, composition and stand age showed important effects but explained a relatively small part of the overall variation in species assemblages. Management accounted for ca 30% of the variation, but non-management variables had a significant impact and the interaction between management and non-management sets resulted in significant influences. Most species for which the variation was highly explained by the model were generally large and with inefficient wings, while the least explained species were small. Our study suggests that: 1) even with highly controlled samples, the influence of management on species assemblages should not be studied by a limited set of categorical variables; 2) management variables may interact with factors outside of the manager's control; 3) a significant part of the variation cannot be explained by habitat variables and needs taking ecological processes into account; 4) rules to optimise constrained ordination techniques applied to species-habitat studies can be proposed. [source] On the estimation of species richness based on the accumulation of previously unrecorded speciesECOGRAPHY, Issue 1 2002Emmanuelle Cam Estimation of species richness of local communities has become an important topic in community ecology and monitoring. Investigators can seldom enumerate all the species present in the area of interest during sampling sessions. If the location of interest is sampled repeatedly within a short time period, the number of new species recorded is typically largest in the initial sample and decreases as sampling proceeds, but new species may be detected if sampling sessions are added. The question is how to estimate the total number of species. The data collected by sampling the area of interest repeatedly can be used to build species accumulation curves: the cumulative number of species recorded as a function of the number of sampling sessions (which we refer to as "species accumulation data"). A classic approach used to compute total species richness is to fit curves to the data on species accumulation with sampling effort. This approach does not rest on direct estimation of the probability of detecting species during sampling sessions and has no underlying basis regarding the sampling process that gave rise to the data. Here we recommend a probabilistic, nonparametric estimator for species richness for use with species accumulation data. We use estimators of population size that were developed for capture-recapture data, but that can be used to estimate the size of species assemblages using species accumulation data. Models of detection probability account for the underlying sampling process. They permit variation in detection probability among species. We illustrate this approach using data from the North American Breeding Bird Survey (BBS). We describe other situations where species accumulation data are collected under different designs (e.g., over longer periods of time, or over spatial replicates) and that lend themselves to of use capture-recapture models for estimating the size of the community of interest. We discuss the assumptions and interpretations corresponding to each situation. [source] Nutrients, diversity, and community structure of two phytotelm systems in a lower montane forest, Puerto RicoECOLOGICAL ENTOMOLOGY, Issue 3 2000Barbara A. Richardson Summary 1. Bromeliad and heliconia phytotelmata in the same forest area were compared in terms of their animal assemblages, nutrient inputs, and plant architecture. 2. For all major elements, nutrient inputs from canopy-derived debris and rainfall in bromeliads were significantly lower than those derived from decaying flower parts and plant secretions in heliconia bracts. Bromeliads contained significantly fewer organisms per unit volume of water and unit dry weight of organic matter than did heliconia inflorescences. They also contained a significantly lower animal biomass (199 mg DW from 15 bromeliads, 527 mg DW from 15 heliconia inflorescences). 3. Species richness was independent of abundance, demonstrating that, at least for small container habitats, higher abundance does not necessarily lead to a greater species richness. Communities were remarkably similar in patterns of relative abundance and species richness (23 spp. in bromeliads, 21 spp. in heliconia), probably due to functional similarities in plant architecture, with the two most abundant species comprising 60,62% of the total community. Coefficients of similarity were low because of marked differences in species assemblages. 4. Some taxa were phytotelm generalists but most showed a preference for one particular habitat, indicating differential selection in the choice of oviposition sites and larval development within the forest ecosystem. In common with many island communities, species richness was lower than that reported for these phytotelm habitats in mainland central and south America. [source] The quest for a null model for macroecological patterns: geometry of species distributions at multiple spatial scalesECOLOGY LETTERS, Issue 8 2008David Storch Abstract There have been several attempts to build a unified framework for macroecological patterns. However, these have mostly been based either on questionable assumptions or have had to be parameterized to obtain realistic predictions. Here, we propose a new model explicitly considering patterns of aggregated species distributions on multiple spatial scales, the property which lies behind all spatial macroecological patterns, using the idea we term ,generalized fractals'. Species' spatial distributions were modelled by a random hierarchical process in which the original ,habitat' patches were randomly replaced by sets of smaller patches nested within them, and the statistical properties of modelled species assemblages were compared with macroecological patterns in observed bird data. Without parameterization based on observed patterns, this simple model predicts realistic patterns of species abundance, distribution and diversity, including fractal-like spatial distributions, the frequency distribution of species occupancies/abundances and the species,area relationship. Although observed macroecological patterns may differ in some quantitative properties, our concept of random hierarchical aggregation can be considered as an appropriate null model of fundamental macroecological patterns which can potentially be modified to accommodate ecologically important variables. [source] The myth of plant species saturationECOLOGY LETTERS, Issue 4 2008Thomas J. Stohlgren Abstract Plant species assemblages, communities or regional floras might be termed ,saturated' when additional immigrant species are unsuccessful at establishing due to competitive exclusion or other inter-specific interactions, or when the immigration of species is off-set by extirpation of species. This is clearly not the case for state, regional or national floras in the USA where colonization (i.e. invasion by exotic species) exceeds extirpation by roughly a 24 to 1 margin. We report an alarming temporal trend in plant invasions in the Pacific Northwest over the past 100 years whereby counties highest in native species richness appear increasingly invaded over time. Despite the possibility of some increased awareness and reporting of native and exotic plant species in recent decades, historical records show a significant, consistent long-term increase in exotic species (number and frequency) at county, state and regional scales in the Pacific Northwest. Here, as in other regions of the country, colonization rates by exotic species are high and extirpation rates are negligible. The rates of species accumulation in space in multi-scale vegetation plots may provide some clues to the mechanisms of the invasion process from local to national scales. [source] Effects of parasitoids on a mycophagous drosophilid community in northern Japan and an evaluation of the disproportionate parasitism hypothesisENTOMOLOGICAL SCIENCE, Issue 1 2006Hiroshi YOROZUYA Abstract In a host,parasitoid system comprising mycophagous drosophilids and their parasitoids, the drosophilid and parasitoid species assemblages, host use, and the prevalence of parasitism were assessed, and the "disproportionate parasitism hypothesis" was examined with consideration given to yearly variations. The mycophagous drosophilids, their fungal food resources and parasitoids were studied by carrying out an intensive census throughout the activity seasons of 4 years (2000,2003) in Hokkaido, northern Japan. Five hymenopterous parasitoid species, four braconids and one eucoilid, were found. Parasitoids of mycophagous drosophilids are reported for the first time from Asia. Most parasitism (99.2%) was by braconids, in contrast to the dominance of eucoilids in Europe. Parasitism was restricted to the summer, and the rate was high from early July to early August every year. There was considerable yearly variation in the composition of abundant fungus, drosophilid and parasitoid species, especially between 2000 and 2001. The alternation of dominant host species was coupled with the alternation of dominant parasitoid species that differed in host use. Despite the yearly variation in the system, the most dominant host species suffered disproportionately heavy parasitism by the correspondingly dominant parasitoid species every year. The parasitism rate was positively correlated with the relative host abundance. This thus indicates that the disproportionate parasitism mechanism may operate, via which species coexistence is promoted by a higher rate of parasitism of the dominant species. [source] Groundfish species diversity and assemblage structure in Icelandic waters during recent years of warmingFISHERIES OCEANOGRAPHY, Issue 1 2010LILJA STEFANSDOTTIR Abstract Elevated ocean temperatures have been predicted to lead to a poleward shift in the latitudinal distribution ranges of fish species. Different responses of fish species to increased temperatures might lead to changes in assemblage structure and local species richness. In this study, the assemblage structure and diversity of groundfish in Icelandic waters were examined using data from a standardized groundfish survey conducted annually in 1996,2007. We used hierarchical cluster analysis to define assemblages in two time periods and canonical correspondence analysis to explore the relationships between the assemblages and temperature, depth, latitude, longitude and year. We further used two estimates of diversity, species richness and the Shannon index. Four major species assemblages were identified. Assemblages in the hydrographically stable deep waters north of the country were consistent during the study, while assemblage structure in the more variable shallow waters underwent some changes. For this period of generally increasing sea temperature, the canonical correspondence analysis also revealed a shift towards species representative of warmer temperatures. Diversity was shown to be highly variable both temporally and spatially, and also to vary with depth and temperature. Species richness increased with temperature and time southwest of the country, but decreased northeast of the country. The different trends detected between the northern and southern areas illustrate the importance of performing analyses at the most appropriate scale. [source] Life-history strategies in freshwater macroinvertebratesFRESHWATER BIOLOGY, Issue 9 2008WILCO C. E. P. VERBERK Summary 1Explaining spatial and temporal differences in species assemblages is a central aim of ecology. It requires a sound understanding of the causal mechanisms underlying the relationship of species with their environment. A species trait is widely acknowledged to be the key that links pattern and process, although the enormous variety of traits hampers generalization about which combination of traits are adaptive in a particular environment. 2In three steps, we used species traits to match species and environment, and chose lentic freshwater ecosystems to illustrate our approach. We first identified key environmental factors and selected the species traits that enable the organism to deal with them. Secondly, we investigated how investments in these traits are related (e.g. through trade-offs). Thirdly, we outlined 13 life-history strategies, based on biological species traits, their interrelations known from life-history theory and their functional implications. 3Species traits and environmental conditions are connected through life-history strategies, with different strategies representing different solutions to particular ecological problems. In addition, strategies may present an integrated response to the environment as they are based on many different traits and their interrelationships. The presence and abundance of (species exhibiting) different life-history strategies in a location may therefore give direct information about how a particular environment is experienced by the species present. 4Life-history strategies can be used to (i) explain differences in species assemblages either between locations or in different periods; (ii) compare waterbodies separated by large geographical distances, which may comprise different regional species pools or span species distribution areas and (iii) reduce often very complex, biodiverse assemblages into a few meaningful, easily interpretable relationships. [source] Distribution of aquatic vascular plants in lowland rivers: separating the effects of local environmental conditions, longitudinal connectivity and river basin isolationFRESHWATER BIOLOGY, Issue 3 2005BENOÎT O. L. DEMARS Summary 1. Changes in species distributions along rivers have rarely been observed independently of changes in environmental conditions and meaningful comparison between different catchments is made difficult by the limited geographical distribution of species. This study presents a new approach to quantify the effect of the spatial structure of lowland river networks on aquatic plant distribution and to explore the potential underlying processes using species life-history characteristics. 2. Twenty-five species of aquatic vascular plants recorded in 62 sites across five calcareous river basins were used to investigate (i) the temporal turnover of plant species, (ii) the habitat utilisation of species, (iii) the trade-offs between different plant life-history characteristics and (iv) the relationship between species life-history characteristics and habitat utilisation. 3. The annual plant turnover within a 3-year period was, although significant, extremely low. It suggests that results from spatial surveys conducted over 3 years should not be undermined by temporal changes. 4. Spatial connectivity along and between rivers was more important than in-channel physical characteristics in shaping species assemblages. Neither chemical factors (ammonium, phosphate) nor extrinsic biotic competitors (filamentous green algae) significantly influenced plant distribution. 5. The most common combinations of life-history characteristics were neither related to environmental conditions nor to spatial isolation. Instead, they could reflect natural selection processes associated with larger scales than those considered in this study. 6. Plant distribution was most strongly related to the dispersal and regeneration abilities of the plants, supporting the hypotheses relating to longitudinal connectivity. The hypothesis that different growth forms would be associated with different in-channel physical features was not verified. As expected, there were no substantial differences in plant life-history characteristics between river basins. [source] The influence of stream invertebrate composition at neighbouring sites on local assemblage compositionFRESHWATER BIOLOGY, Issue 2 2005R. A. SANDERSON Summary 1. The composition of freshwater invertebrate assemblages at a location is determined by a range of physico-chemical and biotic factors in the local environment, as well as larger-scale spatial factors such as sources of recruits. We assessed the relative importance of the species composition of local neighbourhoods and proximal environmental factors on the composition of invertebrate assemblages. 2. Macroinvertebrate assemblages were sampled at 188 running-water sites in the catchment of the River Rede, north-east England. A total of 176 species were recorded. 3. Environmental data, in the form of 13 biotic and abiotic measurements that described stream physical structure, aquatic vegetation and water characteristics, were recorded for each site. Detrended correspondence analysis was then used to simplify nine of these stream environmental variables to create an index of stream structure. 4. The species composition of the invertebrate assemblages was related to the environmental variables, using an information theoretic approach. The impact of the species composition of neighbouring sites on each site was determined using Moran's I and autoregressive modelling techniques. 5. Species composition was primarily associated with water pH and stream structure. The importance of the species composition of neighbouring sites in determining local species assemblages differed markedly between taxa. The autoregressive component was low for Coleoptera, intermediate for Trichoptera and Plecoptera, and high for Ephemeroptera. 6. We hypothesise that the observed differences in the autoregressive component amongst these orders reflects variation in their dispersal abilities from neighbouring sites. [source] Dispersal of adult aquatic Chironomidae (Diptera) in agricultural landscapesFRESHWATER BIOLOGY, Issue 3 2000Yannick R. Delettre SUMMARY 1This study investigates the possible influence of terrestrial landscape structure on the spatial distribution of adult Chironomidae emerging from water bodies in three agricultural areas, each with hedgerow networks, in Brittany (France). 2Using spatially explicit data from 128 yellow pan traps set in pairs at the bottom of hedges throughout the three study areas, we show that landscape structure and heterogeneity must be considered at two different spatial scales. 3At a global scale, distance to water bodies was the main factor explaining the spatial distribution of adult chironomids: both species richness and abundance changed beyond a critical distance to the stream, resulting in different species assemblages of flying insects. 4At a local scale, the abundance of species and individuals at rest in hedges changed with the quality of the hedge (mainly determined by canopy width and cover of the different vegetation layers). 5The density of the hedgerow network, and landscape openness, both influenced the dispersal of chironomid species from water bodies. 6This study, which provides the first estimate of the dispersal capabilities of chironomids in particular landscapes, suggests that the terrestrial environment is an essential component of population dynamics and community structure in aquatic Chironomidae. [source] Small mammal (rodents and lagomorphs) European biogeography from the Late Oligocene to the mid PlioceneGLOBAL ECOLOGY, Issue 4 2007Olivier Maridet ABSTRACT Aim, To analyse the fossil species assemblages of rodents and lagomorphs from the European Neogene in order to assess what factors control small mammal biogeography at a deep-time evolutionary time-scale. Location, Western Europe: 626 fossil-bearing localities located within 31 regions and distributed among 18 successive biochronological units ranging from c. 27 Ma (million years ago; Late Oligocene) to c. 3 Ma (mid Pliocene). Methods, Taxonomically homogenized pooled regional assemblages are compared using the Raup and Crick index of faunal similarity; then, the inferred similarity matrices are visualized as neighbour-joining trees and by projecting the statistically significant interregional similarities and dissimilarities onto palaeogeographical maps. The inferred biogeographical patterns are analysed and discussed in the light of known palaeogeographical and palaeoclimatic events. Results, Successive time intervals with distinct biogeographical contexts are identified. Prior to c. 18 Ma (Late Oligocene and Early Miocene), a relative faunal homogeneity (high interregional connectivity) is observed all over Europe, a time when major geographical barriers and a weak climatic gradient are known. Then, from the beginning of the Middle Miocene onwards, the biogeography is marked by a significant decrease in interregional faunal affinities which matches a drastic global climatic degradation and leads, in the Late Miocene (c. 11 Ma), to a marked latitudinal pattern of small mammal distribution. In spite of a short rehomogenization around the Miocene/Pliocene boundary (6,4 Ma), the biogeography of small mammals in the mid Pliocene (c. 3 Ma) finally closely reflects the extant situation. Main conclusions, The resulting biogeographical evolutionary scheme indicates that the extant endemic situation has deep historical roots corresponding to global tectonic and climatic events acting as primary drivers of long-term changes. The correlation of biogeographical events with climatic changes emphasizes the prevalent role of the climate over geography in generating heterogeneous biogeographical patterns at the continental scale. [source] Landscape modification and habitat fragmentation: a synthesisGLOBAL ECOLOGY, Issue 3 2007Joern Fischer ABSTRACT Landscape modification and habitat fragmentation are key drivers of global species loss. Their effects may be understood by focusing on: (1) individual species and the processes threatening them, and (2) human-perceived landscape patterns and their correlation with species and assemblages. Individual species may decline as a result of interacting exogenous and endogenous threats, including habitat loss, habitat degradation, habitat isolation, changes in the biology, behaviour, and interactions of species, as well as additional, stochastic threats. Human-perceived landscape patterns that are frequently correlated with species assemblages include the amount and structure of native vegetation, the prevalence of anthropogenic edges, the degree of landscape connectivity, and the structure and heterogeneity of modified areas. Extinction cascades are particularly likely to occur in landscapes with low native vegetation cover, low landscape connectivity, degraded native vegetation and intensive land use in modified areas, especially if keystone species or entire functional groups of species are lost. This review (1) demonstrates that species-oriented and pattern-oriented approaches to understanding the ecology of modified landscapes are highly complementary, (2) clarifies the links between a wide range of interconnected themes, and (3) provides clear and consistent terminology. Tangible research and management priorities are outlined that are likely to benefit the conservation of native species in modified landscapes around the world. [source] The role of local and regional processes in shaping dung beetle communities in tropical forest plantations in BorneoGLOBAL ECOLOGY, Issue 4 2000Andrew J. Davis Abstract We examine whether rain forest dung beetle species found in plantations in Sabah, northern Borneo, tend to be endemic or geographically widespread. In addition, linear regressions of abundance vs. distance from a major river in primary rain forest are calculated to see if species found in plantation forest show affinity to one specific biotope (riverine vs. interior forest) in their natural habitat. Results show that 14 of the 40 species recorded from plantations are endemic to Borneo. Only edge-specialist endemic species are found in plantation forest, with no interior-forest specialists recorded. Data suggest that endemic species that are adapted to more exposed conditions in primary rain forest, such as riverine species, can in some instances tolerate man-made habitats. Twenty-nine species (±SE 4.0) per transect are recorded from plantation transects, whereas 44.2 (±1.7 SE) are recorded in primary rain forest. As species richness is much lower in plantations than natural forest, implying loss of biodiversity, we conclude that measures of biogeographic distinctiveness, whereby endemic species confer higher values, may be misleading unless they take into account edge-affinity. Local- as well as regional-distributional data may therefore be needed to interpret correctly patterns of species assemblages in derived forest ecosystems. [source] Factors Influencing the Seasonal Phenology and Composition of Zooplankton Communities in Mountain Temporary PoolsINTERNATIONAL REVIEW OF HYDROBIOLOGY, Issue 4 2005Silvia Tavernini Abstract In 2001 nine temporary pools of the northern Apennines (Italy) were visited on 13 occasions during the ice-free season (May to October). The aims of this research were to define the relationships between hydroperiod and other environmental variables and the zooplankton. In total, 49 zooplankton taxa were identified: 36 rotifers, 5 cladocerans, 6 copepods and 2 anostracans. Our results indicate that hydroperiod is a major determinant affecting zooplankton species richness. The highest number of taxa was found in the pond having the longest duration. Distinctive species assemblages were observed in different habitat types: pools with the shortest hydroperiod were characterised by organisms with brief life cycles (e.g. rotifers) and/or typical of temporary habitat (e.g. anostracans). Of the physical and chemical characteristics, pH and chlorophyll- a appeared to have the largest influence on zooplankton distribution in the studied pools. (© 2005 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim) [source] Breeding bird species diversity in the Negev: effects of scrub fragmentation by planted forestsJOURNAL OF APPLIED ECOLOGY, Issue 5 2001Eyal Shochat Summary 1Afforestation of the Northern Negev, Israel, from 1956 resulted in patches of primarily coniferous trees that fragmented large scrubland areas. This alteration in landscape pattern was followed by immigration of mediterranean bird species to the Negev. 2We counted breeding birds, and measured various environmental variables in scrubland and planted forest patches, to test whether bird assemblages were random subsets of the regional species pool, and whether area or habitat structure was the major correlate with species abundance and distribution. 3Of 22 bird species recorded, only three appeared in both scrub and forest, showing that these two habitats were occupied by different species assemblages. In both habitats, species richness increased with area at a rate greater than that expected by random sampling. In the scrub this increase was related to area per se, while in the forest it was related to habitat diversity in terms of stand age and tree type. 4The density of forest species was unaffected by area, but specialist scrubland species declined as area decreased. We suggest that edge effects might reduce species abundance in small scrubland patches. 5Nested subset analysis indicated that, at the community level, species composition was not random. However, at the species level, the distribution of three forest-dwelling species appeared as random, as it was associated with habitat rather than with patch size. 6Our results indicate that increased diversity of breeding birds in the Northern Negev will require scrub patches larger than 50 ha among the increasingly forested landscape. In contrast, increasing forest area would hardly increase species diversity in the whole landscape. Future forest management regimes should also aim to increase habitat diversity by adding foliage layers, especially in the understorey. Exotic coniferous forests support fewer species than deciduous forests in mediterranean zones around the world. The suggested management regime may improve such forests as habitat for species-rich bird communities. 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