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Species Abundance (species + abundance)

Distribution by Scientific Domains
Life Sciences71%
Earth and Environmental Science24%
Humanities and Social Sciences3%
Distribution within Life Sciences
Ecology & Organismal Biology35%
Conservation Science22%
12 Other Subdomains43%

Kinds of Species Abundance

  • relative species abundance
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    Terms modified by Species Abundance

  • species abundance data
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  • species abundance distribution
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    Selected Abstracts

    Relationships between Fish Species Abundances and Water Transparency in Hypertrophic Turbid Waters of Temperate Shallow Lakes

    INTERNATIONAL REVIEW OF HYDROBIOLOGY, Issue 2 2010
    Juan José Rosso
    Abstract We explored the relationships between Secchi disc depth and the abundance of fish species in very shallow, hypertrophic, turbid waters of Pampa Plain lakes, Argentine. We tested whether the abundance of any of the species present was associated with water transparency for lakes where water transparency, as measured by Secchi disc depth, ranged from 0.1 to 0.4 m. Overall, the abundance of five species (Cnesterodon decemmaculatus, Jenynsia multidentata, Corydoras paleatus, Pimelodella laticeps and Odontesthes bonariensis) seemed to be affected by this narrow gradient in water transparency. These findings represent an interesting result for turbid hypertrophic environments where narrow ranges in water transparency are traditionally neglected as important factors for fishes. We show, however, how water transparency patterns may be still important for some species in highly turbid waters with extremely narrow gradients in Secchi disc depth. (© 2010 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim) [source]

    Diversity and composition of trees and shrubs in Kasagala forest: a semiarid savannah woodland in central Uganda

    AFRICAN JOURNAL OF ECOLOGY, Issue 1 2010
    Samson Gwali
    Abstract The diversity and composition of trees and shrubs of ,5 cm diameter at breast height (DBH) were investigated in Kasagala woodland in central Uganda using 1 ha permanent sample plots. A total of 2745 trees and shrubs with a mean stem density of 686 ha,1 were recorded. These included 69 tree species belonging to 28 families and 47 genera. There was a larger number of small stems compared with that of larger stems. There was significant variation in stem size class distribution between the plots (F = 3.14, P = 0.027). The variation in stem densities (counts) across different size classes was significant (F = 8.31, P < 0.001). Species diversity was higher in the low lands compared with that in the elevated sites in the woodland. The species encountered were unevenly distributed across the plots. Species abundance was not significantly different across the sample plots (F = 2.63, P = 0.053). We suggest that the structure of the forest is typical of any regenerating forest, but other human influences may have played a part in the dominance of size classes <10 cm DBH. The causes of the present status and composition of the woodland require further investigation. Résumé La diversité et la composition des arbres et arbustes de plus de 5 cm dbh ont étéétudiées dans la forêt de Kasagala, au centre de l'Ouganda, en utilisant des parcelles échantillons permanentes d'un hectare. On a relevé la présence de 2745 arbres et arbustes, avec une densité moyenne de 686 troncs ha,1. Ceux-ci comprenaient 69 espèces d'arbres appartenant à 28 familles et à 47 genres. Il y avait un plus grand nombre de petits troncs que de gros. Il y avait une variation significative de la distribution des classes de taille entre les parcelles (F = 3.14, P = 0.027). La variation de la densité des troncs (comptages) entre les différentes classes de taille était significative (F = 8.31, P < 0.001). La diversité des espèces était plus grande dans les terres basses que dans les sites plus élevés dans la forêt. Les espèces rencontrées étaient distribuées de façon inégale entre les parcelles. L'abondance des espèces n'était pas significativement différente selon les parcelles échantillons (F = 2.63, P = 0.053). Nous suggérons que la structure de la forêt est typique de toute forêt en voie de régénération, mais que d'autres influences humaines peuvent avoir joué un rôle dans la dominance des classes de taille <10 cm dbh. Les raisons du statut et de la composition actuels de la forêt requièrent de nouvelles investigations. [source]

    Abundance and habitat segregation in Mediterranean grassland species: the importance of seed weight

    JOURNAL OF VEGETATION SCIENCE, Issue 2 2002
    F.M. Azcárate
    Castroviejo (1986,1999); except taxa yet to be covered which follow Tutin et al. (1964,1980) Abstract. We analysed the relationship between seed traits (weight, shape and dispersal structures) and the abundance and habitat segregation of Mediterranean grassland species. To take into account possible correlations with other plant traits, the study also includes 5 vegetative traits (growth form, plant longevity, clonality, onset of flowering and plant size) of commonly accepted functional importance. Data were recorded for 85 species from dehesa grasslands in central Spain. Species abundance was measured in upper (dry and less productive, high stress) and lower (moist and more productive, low stress) slope zones in the same area. Habitat segregation was estimated using an index based on the relative frequencies of species in upper and lower slope zones. Multiple regression models were fitted using species, as well as phylogenetically independent contrasts, as data points. Annual small-seeded species without specialised dispersal structures are over-represented in dehesa grasslands. Abundance was negatively related to seed weight in upper slope zones. None of the recorded plant traits were related to abundance in the lower slope zones. Habitat segregation was mainly related to seed weight, but also to some vegetative traits. Annual, early flowering and small-seeded species were relatively more abundant in the upper than the lower slope zones. This pattern is independent of phylogeny. Our results suggest that in dry Mediterranean grasslands, abundance of many species is determined by dispersal (production of numerous small seeds) rather than by competitive ability. [source]

    Effects of Forest Management on Amphibians and Reptiles in Missouri Ozark Forests

    CONSERVATION BIOLOGY, Issue 1 2004
    ROCHELLE B. RENKEN
    Within even-aged management sites, we also focused on the local-scale effects of clearcutting on these species by comparing relative abundance among plots located within clearcut stands, 50 m away from clearcut stands, and 200 m away from clearcut stands. Pretreatment sampling of species abundance occurred from 1992 through 1995, and post-treatment sampling occurred from 1997 through 2000. At the landscape scale, treatment significantly affected the abundance of Bufo americanus. This species declined less on even-aged management sites than on control sites, but the general decline on all sites suggests that other factors may have contributed to this result. Within even-aged management sites, most amphibian species declined and some reptile species increased relative to pretreatment abundances within clearcut stands. We found significant effects of distance from clearcut for two amphibian species, Ambystoma maculatum and Rana clamitans, and two reptile species, Scincella lateralis and Sceloporus undulatus. In general, we conclude that clearcuts within even-aged management sites locally affected amphibian and reptile species but, at a larger spatial scale, we did not detect significant effects of even-aged and uneven-aged forest management. These findings represent relatively short-term data but suggest that forest management and maintenance of biodiversity may be compatible when relatively small amounts of the landscape are disturbed. Resumen:,Como parte del Proyecto Ecosistema del Bosque Ozark de Missouri (PEBOM), evaluamos experimentalmente los impactos de la gestión de bosques sobre la abundancia relativa de anfibios y reptiles en los bosques Ozark, Missouri (E.U.A.). Utilizando sitios de estudio extensos (es decir, de tamaño promedio de 400ha) como la unidad experimental, estudiamos los efectos de tratamientos de manejo de bosques de edad uniforme y dispar comparados con el manejo sin cosecha (es decir, control) sobre la abundancia relativa de 13 especies focales de anfibios y reptiles. En los sitios de manejo de edad uniforme, también analizamos los efectos a escala local de la tala completa sobre estas especies comparando la abundancia relativa entre parcelas localizadas dentro de los claros talados, a 50 m y 200 m de los claros. Para determinar la abundancia de especies, se tomaron muestras previas al tratamiento de 1992 a 1995, y muestras posteriores al tratamiento de 1997 a 2000. A la escala de paisaje, el tratamiento afectó significativamente la abundancia de Bufo americanus. La abundancia de esta especie disminuyó menos en sitios de manejo de edad uniforme que en los sitios control, pero la disminución general en todos los sitios sugiere que otros factores pudieron haber contribuido a este resultado. En los sitios de manejo de edad uniforme, la abundancia de la mayoría de las especies de anfibios disminuyó y algunas especies de reptiles incrementaron en relación con las abundancias previas al tratamiento dentro de los claros talados. Encontramos efectos significativos de la distancia del claro para dos especies de anfibios, Ambystoma maculatum y Rana clamitans, y dos especies de reptiles, Scincella lateralis y Sceloporus undulatus. En general, concluimos que la tala en sitios de edad uniforme afectó localmente a las especies de anfibios y reptiles, pero a una mayor escala espacial, no detectamos impactos significativos entre el manejo de sitios de edad uniforme y dispar. Estos hallazgos representan datos de relativamente corto plazo pero sugieren que la gestión de bosques y el mantenimiento de la biodiversidad pueden ser compatibles cuando se perturban superficies relativamente pequeñas del paisaje. [source]

    Using multi-scale species distribution data to infer drivers of biological invasion in riparian wetlands

    DIVERSITY AND DISTRIBUTIONS, Issue 1 2010
    Jane A. Catford
    Abstract Aim, Biological invasion is a major conservation problem that is of interest to ecological science. Understanding mechanisms of invasion is a high priority, heightened by the management imperative of acting quickly after species introduction. While information about invading species' ecology is often unavailable, species distribution data can be collected near the onset of invasion. By examining distribution patterns of exotic and native plant species at multiple spatial scales, we aim to identify the scale (of those studied) that accounts for most variability in exotic species abundance, and infer likely drivers of invasion. Location, River Murray wetlands, south-eastern Australia. Methods, A nested, crossed survey design was used to determine the extent of variation in wetland plant abundance, grazing intensity and water depth at four spatial scales (reaches, wetland clumps, wetlands, wetland sections), and among three Depth-strata. We examined responses of exotic and native species groups (grouped into terrestrial and amphibious taxa), native weeds and 10 individual species using hierarchical ANOVA. Results, As a group dominated by terrestrial taxa, exotic species cover varied at reach-, wetland- and section-scales. This likely reflects differences in abiotic characteristics and propagule pressure at these scales. Groups based on native species did not vary at any scale examined. Cover of 10 species mostly varied among and within wetlands (patterns unrelated to species' origin or functional group), but species' responses differed, despite individual plants being similar in size. While flora mostly varied among wetlands, exotic cover varied most among reaches (26%), which was attributed to hydrological modification and human activities. Main conclusions, Multi-scale surveys can rapidly identify factors likely to affect species' distributions and can indicate where future research should be directed. By highlighting disproportionate variation in exotic cover among reaches, this study suggests that flow regulation and human-mediated dispersal facilitate exotic plant invasion in River Murray wetlands. [source]

    Predicting global abundance of a threatened species from its occurrence: implications for conservation planning

    DIVERSITY AND DISTRIBUTIONS, Issue 1 2009
    Marcos S. L. Figueiredo
    Abstract Aim, Global abundance is an important characteristic of a species that is correlated with geographical distribution and body size. Despite its importance these estimates are not available since reliable field estimates are either expensive or difficult to obtain. Based on the relationship between a species' local abundance and distribution, some authors propose that abundance can be obtained through spatial distribution data from maps plotted at different scales. This has never been tested over the entire geographical range of a species. Thus, the aim of this study was to estimate global abundance of the Neotropical primate Brachyteles hypoxanthus (northern muriqui) and compare the results with available field estimates. Location, From southern Bahia to Minas Gerais and Espírito Santo states, in the Brazilian Atlantic rain forest. Methods, We compiled 25 recent occurrence localities of B. hypoxanthus and plotted them in grid cells of five different sizes (1, 25, 50, 75 and 100 km per side) to evaluate the performance and accuracy of abundance estimates over a wide range of scales. The abundance estimates were obtained by the negative binomial distribution (NBD) method and corrected by average group size to take into account primate social habits. To assess the accuracy of the method, the predicted abundances were then compared to recent independent field estimates. Results, The NBD estimates were quite accurate in predicting B. hypoxanthus global abundance, once the gregarious habits of this species are taken into account. The predicted abundance estimates were not statistically different from those obtained from field estimates. Main conclusions, The NBD method seems to be a quick and reliable approach to estimate species abundance once several limiting factors are taken into account, and can greatly impact conservation planning, but further applications in macroecological and ecological theory testing needs improvement of the method. [source]

    Comparing agglomerative clustering and three weed classification frameworks to assess the invasiveness of alien species across spatial scales

    DIVERSITY AND DISTRIBUTIONS, Issue 6 2006
    Roger A. Lawes
    ABSTRACT To prioritize weed management at the catchment scale, information is required on the species present, their relatively frequency, abundance, and likely spread and impact. The objective of this study was to classify the invasiveness of alien species that have invaded the Upper Burdekin Catchment in Queensland, Australia, at three spatial scales. A combination of three published weed classification frameworks and multivariate techniques were employed to classify species based on their frequency and cover at a range of spatial scales. We surveyed the Upper Burdekin Catchment for alien species, and for each species determined the following distribution indices , site frequency, total cover, transect frequency per site frequency and quadrat frequency per site frequency, cover per quadrat when present, cover per transect when present, and cover per site when present. These indices capture the effect of species abundance and frequency between sites (site frequency and total cover), within sites (transect frequency per site and cover per transect when present), and within transects (quadrat frequency per site frequency and cover per site). They were used to classify the species into seven groups using a hierarchical cluster analysis. The relationship between the indices was explored to determine how effective the small scale, site-specific indices were at predicting the broader, landscape-scale patterns. Strong correlations were observed between transect frequency per site and frequency (r2 = 0.89) and cover per transect when present and total cover (r2 = 0.62). This suggests that if a weed is abundant at the site level, it has the potential to occupy large areas of the catchment. The species groupings derived from the application of the three published weed classification frameworks were compared graphically to the groupings derived from the cluster analysis. One of the frameworks classified species into three groups. The other two frameworks classified species into four groups. There was a high degree of subjectivity in applying the frameworks to the survey data. Some of the data were of no relevance to the classification frameworks and were therefore ignored. We suggest that the weed classification frameworks should be used in conjunction with existing multivariate techniques to ensure that classifications capture important natural variations in observed data that may reflect invasion processes. The combined use of the frameworks and multivariate techniques enabled us to aggregate species into categories appropriate for management. [source]

    A spatial model of bird abundance as adjusted for detection probability

    ECOGRAPHY, Issue 2 2009
    P. Marcos Gorresen
    Modeling the spatial distribution of animals can be complicated by spatial and temporal effects (i.e. spatial autocorrelation and trends in abundance over time) and other factors such as imperfect detection probabilities and observation-related nuisance variables. Recent advances in modeling have demonstrated various approaches that handle most of these factors but which require a degree of sampling effort (e.g. replication) not available to many field studies. We present a two-step approach that addresses these challenges to spatially model species abundance. Habitat, spatial and temporal variables were handled with a Bayesian approach which facilitated modeling hierarchically structured data. Predicted abundance was subsequently adjusted to account for imperfect detection and the area effectively sampled for each species. We provide examples of our modeling approach for two endemic Hawaiian nectarivorous honeycreepers: ,i,iwi Vestiaria coccinea and ,apapane Himatione sanguinea. [source]

    Colonisation of pitcher plant leaves at several spatial scales

    ECOLOGICAL ENTOMOLOGY, Issue 4 2003
    M. Kurtis Trzcinski
    Abstract., 1.,The effect of meso-scale (zone within bog and local plant density) and fine-scale (leaf length and resource availability) factors on the colonisation of pitcher plant leaves by arthropods was examined in an eastern Canadian bog. 2.,In spring, the abundances of three arthropods, the mosquito Wyeomyia smithii, the midge Metriocnemus knabi, and the mite Sarraceniopus gibsoni, were determined for plots with low, moderate, and high densities of pitcher plants. All overwintering inhabitants were then removed from the plots. Newly opening leaves were colonised from outside the plots, and arthropod abundances were assessed again in autumn. 3.,Pitcher plant fauna varied in their response to the meso-scale factors. In autumn (soon after colonisation), midges were more abundant in areas with high densities of pitcher plants. The relationship between mosquito abundance and plant density, and the variation in abundance among zones within the bog in the spring, were probably due to overwintering mortality. 4.,All taxa responded to the fine-scale factors, leaf length, and capture rate, in the autumn, but the strength of the responses frequently depended on a meso-scale factor (plant density), in which responses were usually strongest where plants were sparse. Thus, the interaction between meso- and fine-scale processes needs to be considered when interpreting patterns of species abundance within arthropod assemblages in pitcher plant leaves. [source]

    Connectivity, non-random extinction and ecosystem function in experimental metacommunities

    ECOLOGY LETTERS, Issue 5 2010
    Philip Staddon
    Ecology Letters (2010) 13: 543,552 Abstract The spatial insurance hypothesis indicates that connectivity is an important attribute of natural ecosystems that sustains both biodiversity and ecosystem function. We tested the hypothesis by measuring the impact of manipulating connectivity in experimental metacommunties of a natural and diverse microecosystem. Isolation led to the extinction of large-bodied apex predators, subsequently followed by increases in prey species abundance. This trophic cascade was associated with significantly altered carbon and nitrogen fluxes in fragmented treatments. The ecosystem impacts were characteristic of a function debt because they persisted for several generations after the initial loss of connectivity. Local extinctions and disruption of ecosystem processes were mitigated, and even reversed, by the presence of corridors in the connected metacommunities, although these beneficial effects were unexpectedly delayed. We hypothesized that corridors maintained grazer movement between fragments, which enhanced microbial activity, and decomposition in comparison to isolated fragments. Our results indicate that knowledge of habitat connectivity and spatial processes is essential to understand the magnitude and timing of ecosystem perturbation in fragmented landscapes. [source]

    The quest for a null model for macroecological patterns: geometry of species distributions at multiple spatial scales

    ECOLOGY LETTERS, Issue 8 2008
    David Storch
    Abstract There have been several attempts to build a unified framework for macroecological patterns. However, these have mostly been based either on questionable assumptions or have had to be parameterized to obtain realistic predictions. Here, we propose a new model explicitly considering patterns of aggregated species distributions on multiple spatial scales, the property which lies behind all spatial macroecological patterns, using the idea we term ,generalized fractals'. Species' spatial distributions were modelled by a random hierarchical process in which the original ,habitat' patches were randomly replaced by sets of smaller patches nested within them, and the statistical properties of modelled species assemblages were compared with macroecological patterns in observed bird data. Without parameterization based on observed patterns, this simple model predicts realistic patterns of species abundance, distribution and diversity, including fractal-like spatial distributions, the frequency distribution of species occupancies/abundances and the species,area relationship. Although observed macroecological patterns may differ in some quantitative properties, our concept of random hierarchical aggregation can be considered as an appropriate null model of fundamental macroecological patterns which can potentially be modified to accommodate ecologically important variables. [source]

    Seasonal and spatial variation in a prairie stream-fish assemblage

    ECOLOGY OF FRESHWATER FISH, Issue 3 2002
    K. G. Ostrand
    Abstract,,,Stream-fish assemblage and environmental data for 13 sites in the upper Brazos River, Texas, USA during 1997 and 1998 were used to assess the relationship between environmental conditions, and seasonal and spatial variation in fish species abundance and distribution patterns. There was considerable spatial variation in environmental conditions among sites. Spatial variation in species diversity and species composition was related to variation in conductance (salinity), depth and current velocity among sites and streams. Species diversity increased downstream and species composition shifted from primarily cyprinodontids upstream to cyprinids downstream. Among all dominant species, spatial components of variation in fish abundance were greater than seasonal components, suggesting that assemblage structure is determined more by average or persistent differences in environmental conditions among sites than by seasonal variation in environmental conditions. [source]

    Acute effects of the antibiotic oxytetracycline on the bacterial community of the grass shrimp, Palaemonetes pugio,

    ENVIRONMENTAL TOXICOLOGY & CHEMISTRY, Issue 12 2009
    Miguel Uyaguari
    Abstract The toxicity of oxytetracycline (OTC) was evaluated in adult grass shrimp, Palaemonetes pugio. Initially, static acute (96 h) toxicity tests were conducted with shrimp exposed from 0 to 1,000 mg/L OTC. A calculated lethal concentration 50% value of 683.30 mg/L OTC (95% confidence interval 610.85,764.40 mg/L) was determined from these tests, along with a lowest-observable-effect concentration of 750 mg/L and no-observable-effect concentration of 500 mg/L. Moreover, chronic sublethal effects of OTC exposure on grass shrimp intestinal bacterial population were assessed using doses from 0 to 32 mg/L OTC. The total viable counts in digestive tract content had levels between 5.2 and 1 × 104 colony-forming units per gram of tissue at times 0 and 96 h, respectively. Aeromonas hydrophila were the most resistant isolates (27.78%) to OTC exposure. Vibrio alginolyticus showed significant positive growth following exposure to OTC, whereas other bacterial species abundance declined over time. A total of 268 bacterial isolates were screened using antibiotic resistance analysis from a library containing 459 isolates. Among the tested isolates from the OTC treatments, 15.4% were resistant to OTC and 84.6% were OTC sensitive. Oxytetracycline was generally not consistently quantifiable with liquid chromatography-mass spectroscopy technique in shrimp homogenates. The only peak detected was at the 32 mg/L dose of OTC at 96 h. Nevertheless, OTC had a significant biological effect on the bacterial population. Antibiotic resistance to five other antibiotics (penicillin G, sulfathiazole, trimethoprim, trimethoprim and sulfamethoxazole, and tetracycline) was strongly associated with OTC exposures. The present study indicates that OTC toxicity effects in P. pugio and changes in the shrimp microbial community would only be expected under special circumstances. [source]

    Community responses to contaminants: Using basic ecological principles to predict ecotoxicological effects

    ENVIRONMENTAL TOXICOLOGY & CHEMISTRY, Issue 9 2009
    William H. Clements
    Abstract Community ecotoxicology is defined as the study of the effects of contaminants on patterns of species abundance, diversity, community composition, and species interactions. Recent discoveries that species diversity is positively associated with ecosystem stability, recovery, and services have made a community-level perspective on ecotoxicology more important than ever. Community ecotoxicology must explicitly consider both present and impending global change and shift from a purely descriptive to a more predictive science. Greater consideration of the ecological factors and threshold responses that determine community resistance and resilience should improve our ability to predict how and when communities will respond to, and recover from, xenobiotics. A better understanding of pollution-induced community tolerance, and of the costs of this tolerance, should facilitate identifying contaminant-impacted communities, thus forecasting the ecological consequences of contaminant exposure and determining the restoration effectiveness. Given the vast complexity of community ecotoxicology, simplifying assumptions, such as the possibility that the approximately 100,000 registered chemicals could be reduced to a more manageable number of contaminant classes with similar modes of action, must be identified and validated. In addition to providing a framework for predicting contaminant fate and effects, food-web ecology can help to identify communities that are sensitive to contaminants, contaminants that are particularly insidious to communities, and species that are crucial for transmitting adverse effects across trophic levels. Integration of basic ecological principles into the design and implementation of ecotoxicological research is essential for predicting contaminant effects within the context of rapidly changing, global environmental conditions. [source]

    Using fishers' anecdotes, naturalists' observations and grey literature to reassess marine species at risk: the case of the Gulf grouper in the Gulf of California, Mexico

    FISH AND FISHERIES, Issue 2 2005
    Andrea Sáenz, Arroyo
    Abstract Designing fishing policies without knowledge of past levels of target species abundance is a dangerous omission for fisheries management. However, as fisheries monitoring started long after exploitation of many species began, this is a difficult issue to address. Here we show how the ,shifting baseline' syndrome can affect the stock assessment of a vulnerable species by masking real population trends and thereby put marine animals at serious risk. Current fishery data suggest that landings of the large Gulf grouper (Mycteroperca jordani, Serranidae) are increasing in the Gulf of California. However, reviews of historical evidence, naturalists' observations and a systematic documentation of fishers' perceptions of trends in the abundance of this species indicate that it has dramatically declined. The heyday for the Gulf grouper fishery occurred prior to the 1970s, after which abundance dropped rapidly, probably falling to a few percent of former numbers. This decline happened long before fishery statistics were formally developed. We use the case of the Gulf grouper to illustrate how other vulnerable tropical and semi-tropical fish and shellfish species around the world may be facing the same fate as the Gulf grouper. In accordance with other recent studies, we recommend using historical tools as part of a broad data-gathering approach to assess the conservation status of marine species that are vulnerable to over-exploitation. [source]

    Broadbill swordfish: status of established fisheries and lessons for developing fisheries

    FISH AND FISHERIES, Issue 4 2000
    P. Ward
    Guidelines for the assessment and management of developing swordfish fisheries are derived through an examination of five swordfish fisheries. As they develop, swordfish fisheries may be inclined to local depletion around underwater features, such as seamounts and banks. Few nations have applied the precautionary approach in managing their developing swordfish fisheries. Without controls, swordfish fisheries expand geographically and fishing effort increases, often overshooting optimum levels. However, it is difficult to distinguish clear evidence of fishery collapse; modern longliners harvest widely distributed tuna and swordfish and they are able to relocate to distant areas or switch between target species in response to fluctuations in species abundance and price. Furthermore, the wide distribution of swordfish combined with year-round spawning and high growth rates amongst juveniles probably contribute to the apparent resilience of swordfish stocks to intensive harvesting. Over half the world's swordfish catch is taken as an incidental catch of longliners fishing for tuna. In several areas, such as the North Atlantic, catch quotas have sometimes caused tuna longline fishers to discard swordfish. Minimum size limits have also resulted in discarding of swordfish in tuna fisheries and in dedicated swordfish fisheries. In addition to weakening the effectiveness of those management measures, bycatch and discarding add to the complexities of managing swordfish fisheries and to uncertainties in assessing the stocks. Longliners that target swordfish often fish at high latitudes where interactions with marine wildlife, such as seabird, are generally more frequent than at low latitudes. Concern over incidental catches of marine wildlife and other species is becoming a driving force in the management of several swordfish fisheries. Fishery management organisations will need to implement management measures to protect non-target species and gather reliable data and information on the situation by placing observers on boats fishing for swordfish. [source]

    Cladoceran community responses to biomanipulation and re-oligotrophication in Lake Vesijärvi, Finland, as inferred from remains in annually laminated sediment

    FRESHWATER BIOLOGY, Issue 6 2010
    MIRVA NYKÄNEN
    Summary 1. We studied the role of zooplankton in biomanipulation and the subsequent recovery phase in the Enonselkä basin of Lake Vesijärvi, using subfossil cladocerans in annually laminated sediment. Measures to restore the Enonselkä basin included reduction in external nutrient loading and mass removal of plankti- and benthivorous fish. Water clarity increased and the lake changed from a eutrophic to a mesotrophic state. However, some signs of increased turbidity were observed after 5,10 years of successful recovery. 2. Annual laminae in a freeze core sample were identified and sliced, based on the seasonal succession of diatoms. Cladoceran remains and rotifer eggs were counted, and Daphnia ephippia and Eubosmina and Bosmina ephippia and carapaces were measured. Annual changes in pelagic species composition were studied with principal component analysis. Individual species abundance, size measurements and various cladoceran-based indices or ratios (commonly used to reconstruct changes in trophic state and fish predation) were tested for change between four distinct periods: I (1985,1988) dense fish stocks, poor water quality; II (1989,1992) fish removal; III (1993,1997) low fish density, improved water quality; IV (1998,2002) slightly increased fish density and poorer water quality. 3. After the removal of fish, the mean size of Daphnia ephippia and Eubosmina crassicornis ephippia and carapaces increased significantly. In contrast, the percentage of Daphnia did not increase. When based on ephippia, the ratio Daphnia/(Daphnia + E. crassicornis) increased, but the interpretation was obscured by the tolerance of fish predation by small Daphnia and by the fact that bosminids were the preferred food of roach. Moreover, ephippial production by E. crassicornis decreased in recent years. 4. The abundance of Diaphanosoma brachyurum and Limnosida frontosa increased significantly after the fish population was reduced, while that of Ceriodaphnia and rotifers decreased. 5. The expanding littoral vegetation along with improved water clarity was clearly reflected in the concentration of littoral species in the deep sediment core. The species diversity index for the entire subfossil community also increased. 6. The period of faltering recovery was characterised by greater interannual variability and an increased percentage of rotifers. Nevertheless, the mean sizes of Daphnia ephippia and E. crassicornis ephippia and carapaces indicated a low density of fish. The deteriorating water quality was apparently related to multiple stressors in the catchment after rehabilitation, such as intensified lakeshore building, as well as to exceptional weather conditions, challenging the management methods in use. [source]

    Biodiversity and resource use of larval chironomids in relation to environmental factors in a large river

    FRESHWATER BIOLOGY, Issue 6 2002
    CHRISTIAN FESL
    1.,Larval chironomids were examined at four sites on a cross-section of the River Danube in Austria between September 1995 and August 1996. The sites differed in hydraulics, sediment composition and habitat stability. 2.,Species,accumulation curves, showing the increase in number of species with increasing sampling effort, from three main channel sites were best described by a logarithmic model, suggesting that most of the species occurring at these sites were found. Data from a site connected to a backwater fitted best to a power model, indicating a random assemblage with additional species immigrating from the backwater area. 3.,Properties of the community were estimated using Jackknife techniques: species richness (range of mean values at the four sites: 32,91), H, diversity (1.5,2.3), evenness (0.23,0.28), spatial resource width (0.01,0.06), spatial resource overlap (0.13,0.20), spatial species aggregation (0.60,0.77), temporal community persistence (Kendal's correlation coefficient: 0.47,0.60) and beta-diversity (6.2,9.7). 4.,Redundancy analysis (RDA) was used to relate the community properties and species abundance to environmental factors. Habitat stability was the major factor associated with community structure. Higher sediment turnover led to higher spatial aggregation and, consequently, a decrease in spatial resource width and overlap, and to a decline in larval density and species richness. 5.,Species-abundance patterns agreed well with the log-normal model. Moderate community persistence and stability of the streambed sediments suggest that the log-normal model may be a good descriptor for communities of intermediately disturbed habitats, like large rivers, rather than stable habitats. [source]

    Body size-dependent responses of a marine fish assemblage to climate change and fishing over a century-long scale

    GLOBAL CHANGE BIOLOGY, Issue 2 2010
    MARTIN J. GENNER
    Abstract Commercial fishing and climate change have influenced the composition of marine fish assemblages worldwide, but we require a better understanding of their relative influence on long-term changes in species abundance and body-size distributions. In this study, we investigated long-term (1911,2007) variability within a demersal fish assemblage in the western English Channel. The region has been subject to commercial fisheries throughout most of the past century, and has undergone interannual changes in sea temperature of over 2.0 °C. We focussed on a core 30 species that comprised 99% of total individuals sampled in the assemblage. Analyses showed that temporal trends in the abundance of smaller multispecies size classes followed thermal regime changes, but that there were persistent declines in abundance of larger size classes. Consistent with these results, larger-growing individual species had the greatest declines in body size, and the most constant declines in abundance, while abundance changes of smaller-growing species were more closely linked to preceding sea temperatures. Together these analyses are suggestive of dichotomous size-dependent responses of species to long-term climate change and commercial fishing over a century scale. Small species had rapid responses to the prevailing thermal environment, suggesting their life history traits predisposed populations to respond quickly to changing climates. Larger species declined in abundance and size, reflecting expectations from sustained size-selective overharvesting. These results demonstrate the importance of considering species traits when developing indicators of human and climatic impacts on marine fauna. [source]

    Climate change and bet-hedging: interactions between increased soil temperatures and seed bank persistence

    GLOBAL CHANGE BIOLOGY, Issue 10 2009
    MARK K. J. OOI
    Abstract In order to predict the long-term consequences of climate change, it is necessary to link future environmental changes to mechanisms that control plant population processes. This information can then be incorporated into strategies to more accurately model climate change impacts on species or to estimate future extinction risks. We examined the impact of increased temperatures on the longevity and dynamics of the persistent soil seed banks of eight ephemeral species from arid Australia. We found that the predicted global temperature increases under climate change will be reflected in increased soil temperatures, and that seeds in the soil seed bank will be exposed to long durations of high temperatures over the summer months. Three of the eight species studied had significantly greater levels of germination after exposure to predicted increased soil temperatures. Another species displayed a dramatic decrease in seed viability after such exposure. The capacity of such species to use the seed bank to bet hedge against rainfall events that cause germination but are insufficient to allow plant maturation, is compromised by increased germinability and subsequent loss or reduction of seed bank persistence. These predicted changes in the dynamics of soil seed banks increase the risk of local extinctions of these species, while the composition of the community may be altered by changes in species abundance. Our results show that the risk spreading mechanism provided by persistent seed banks could be compromised by the mechanistic impact of forecast temperature increases in arid habitats, and highlight the need to understand mechanisms that control population dynamics when attempting to address likely future impacts of climate change on biodiversity. [source]

    Detecting the impact of oceano-climatic changes on marine ecosystems using a multivariate index: The case of the Bay of Biscay (North Atlantic-European Ocean)

    GLOBAL CHANGE BIOLOGY, Issue 1 2008
    GEORGES HEMERY
    Abstract Large-scale univariate climate indices (such as NAO) are thought to outperform local weather variables in the explanation of trends in animal numbers but are not always suitable to describe regional scale patterns. We advocate the use of a Multivariate Oceanic and Climatic index (MOCI), derived from ,synthetic' and independent variables from a linear combination of the total initial variables objectively obtained from Principal Component Analysis. We test the efficacy of the index using long-term data from marine animal populations. The study area is the southern half of the Bay of Biscay (43°,47°N; western Europe). Between 1974 and 2000 we monitored cetaceans and seabirds along 131000 standardized line transects from ships. Fish abundance was derived from commercial fishery landings. We used 44 initial variables describing the oceanic and atmospheric conditions and characterizing the four annual seasons in the Bay of Biscay. The first principal component of our MOCI is called the South Biscay Climate (SBC) index. The winter NAO index was correlated to this SBC index. Inter-annual fluctuations for most seabird, cetacean and fish populations were significant. Boreal species (e.g. gadiformes fish species, European storm petrel and Razorbill ,) with affinities to cold temperate waters declined significantly over time while two (Puffin and Killer Whale) totally disappeared from the area during the study period. Meridional species with affinities to hotter waters increased in population size. Those medium-term demographic trends may reveal a regime shift for this part of the Atlantic Ocean. Most of the specific observed trends were highly correlated to the SBC index and not to the NAO. Between 40% and 60% of temporal variations in species abundance were explained by the multivariate SBC index suggesting that the whole marine ecosystem is strongly affected by a limited number of physical parameters revealed by the multivariate SBC index. Aside the statistical error of the field measurements, the remaining variation unexplained by the physical characteristics of the environment correspond to the impact of anthropogenic activities such overfishing and oil-spills. [source]

    Altered kelp (Laminariales) phlorotannins and growth under elevated carbon dioxide and ultraviolet-B treatments can influence associated intertidal food webs

    GLOBAL CHANGE BIOLOGY, Issue 8 2007
    ANDREW K. SWANSON
    Abstract Due to the importance of brown algae, such as kelp (Laminariales, Phaeophyta), within most cool nearshore environments, any direct responses of kelp to multiple global changes could alter the integrity of future coastal marine systems. Fifty-five-day manipulation of carbon dioxide (CO2) and ultraviolet light (UVB) within outdoor sea-tanks, approximating past, present and two predicted future levels, examined the direct influences on Saccharina latissima (=Laminaria saccharina) and Nereocystis luetkeana development and biochemistry, as well as the indirect influences on a marine herbivore (Tegula funebralis; Gastropoda, Mollusca) and on naturally occurring intertidal detritivores. Kelp species displayed variable directional (negative and positive growth) and scale responses to CO2 and UVB manipulations, which was influenced by interactions. Kelp phlorotannin (phenolic) production in blade tissues was induced by elevated UVB levels, and especially enhanced (additively) by elevated CO2, further suggesting that some actively growing kelp species are carbon limited in typical nearshore environments. Negative indirect effects upon detritivore consumers fed CO2 -manipulated kelp blade tissues were detected, however, no statistical relationships existed among UVB-treated tissues, and test herbivores did not distinguish between phlorotannin-altered CO2: UVB-treated kelp blade tissues. Results suggest that past and future conditions differentially benefit these kelp species, which implies a potential for shifts in species abundance and community composition. Higher CO2 conditions can indirectly impede marine decay processes delaying access to recycled trace nutrients, which may be disruptive to the seasonal regrowth of algae and/or higher trophic levels of nearshore ecosystems. [source]

    Vegetation responses in Alaskan arctic tundra after 8 years of a summer warming and winter snow manipulation experiment

    GLOBAL CHANGE BIOLOGY, Issue 4 2005
    C.-H. A. Wahren
    Abstract We used snow fences and small (1 m2) open-topped fiberglass chambers (OTCs) to study the effects of changes in winter snow cover and summer air temperatures on arctic tundra. In 1994, two 60 m long, 2.8 m high snow fences, one in moist and the other in dry tundra, were erected at Toolik Lake, Alaska. OTCs paired with unwarmed plots, were placed along each experimental snow gradient and in control areas adjacent to the snowdrifts. After 8 years, the vegetation of the two sites, including that in control plots, had changed significantly. At both sites, the cover of shrubs, live vegetation, and litter, together with canopy height, had all increased, while lichen cover and diversity had decreased. At the moist site, bryophytes decreased in cover, while an increase in graminoids was almost entirely because of the response of the sedge Eriophorum vaginatum. These community changes were consistent with results found in studies of responses to warming and increased nutrient availability in the Arctic. However, during the time period of the experiment, summer temperature did not increase, but summer precipitation increased by 28%. The snow addition treatment affected species abundance, canopy height, and diversity, whereas the summer warming treatment had few measurable effects on vegetation. The interannual temperature fluctuation was considerably larger than the temperature increases within OTCs (<2°C), however. Snow addition also had a greater effect on microclimate by insulating vegetation from winter wind and temperature extremes, modifying winter soil temperatures, and increasing spring run-off. Most increases in shrub cover and canopy height occurred in the medium snow-depth zone (0.5,2 m) of the moist site, and the medium to deep snow-depth zone (2,3 m) of the dry site. At the moist tundra site, deciduous shrubs, particularly Betula nana, increased in cover, while evergreen shrubs decreased. These differential responses were likely because of the larger production to biomass ratio in deciduous shrubs, combined with their more flexible growth response under changing environmental conditions. At the dry site, where deciduous shrubs were a minor part of the vegetation, evergreen shrubs increased in both cover and canopy height. These changes in abundance of functional groups are expected to affect most ecological processes, particularly the rate of litter decomposition, nutrient cycling, and both soil carbon and nitrogen pools. Also, changes in canopy structure, associated with increases in shrub abundance, are expected to alter the summer energy balance by increasing net radiation and evapotranspiration, thus altering soil moisture regimes. [source]

    Factors determining mammal species richness on habitat islands and isolates: habitat diversity, disturbance, species interactions and guild assembly rules

    GLOBAL ECOLOGY, Issue 1 2000
    Barry J. Fox
    Abstract 1For over three decades the equilibrium theory of island biogeography has galvanized studies in ecological biogeography. Studies of oceanic islands and of natural habitat islands share some similarities to continental studies, particularly in developed regions where habitat fragmentation results from many land uses. Increasingly, remnant habitat is in the form of isolates created by the clearing and destruction of natural areas. Future evolution of a theory to predict patterns of species abundance may well come from the application of island biogeography to habitat fragments or isolates. 2In this paper we consider four factors other than area and isolation that influence the number and type of mammal species coexisting in one place: habitat diversity, habitat disturbance, species interactions and guild assembly rules. In all examples our data derive from mainland habitat, fragmented to differing degrees, with different levels of isolation. 3Habitat diversity is seen to be a good predictor of species richness. Increased levels of disturbance produce a relatively greater decrease in species richness on smaller than on larger isolates. Species interactions in the recolonization of highly disturbed sites, such as regenerating mined sites, is analogous to island colonization. Species replacement sequences in secondary successions indicate not just how many, but which species are included. Lastly, the complement of species established on islands, or in insular habitats, may be governed by guild assembly rules. These contributions may assist in taking a renewed theory into the new millennium. [source]

    How does grazing intensity influence the diversity of plants and insects in a species-rich upland grassland on basalt soils?

    GRASS & FORAGE SCIENCE, Issue 1 2009
    B. Dumont
    Abstract The effect of stocking rate on the species richness, abundance and functional diversity of vascular plants, butterflies and grasshoppers was examined in a semi-natural upland pasture in central France. Over a 5-year period, 3·6-ha plots were continuously grazed by Charolais heifers at 1·4 (High stocking rate), 1·0 (Intermediate) and 0·6 (Low) livestock units (LU) ha,1. To evaluate botanical diversity, percentage cover of all plant species was estimated in late July in ten fixed 1 m × 1 m quadrats per plot. Butterflies were counted on three occasions between late June and early August along three fixed 50-m-long transects per plot using the ,Pollard walk', with grasshoppers being recorded on two occasions along the same transects. Diversity patterns of the three taxa were affected by stocking rate. For plants, species abundance changed more than species number. Abundance of forbs became higher under the Low compared with the High stocking rate. Stress-tolerant grasses were also more abundant in plots grazed at the Low stocking rate, while an opposite trend was observed for competitive grasses. Butterflies consistently responded to alterations in vegetation composition, especially to the dynamics of nectar plants. The species richness of grasshoppers also increased in plots at the Low stocking rate. The Low and Intermediate stocking rates were suitable for providing a high diversity of the three taxonomic groups. The results suggested that at least butterfly diversity would peak in vegetation taller than that of vascular plants. [source]

    Army ants in four forests: geographic variation in raid rates and species composition

    JOURNAL OF ANIMAL ECOLOGY, Issue 3 2007
    SEAN O'DONNELL
    Summary 1The New World army ants are top predators in the litter of tropical forest, but no comprehensive studies exist on variation in assemblage-wide activity and species composition. We used standardized protocols to estimate foraging raid rates and species composition of army ant communities in four Neotropical forests. The study sites spanned approximately 10° latitude, with two sites each in Central and South America. 2We recorded a total of 22 species of army ants. The four sites varied in observed and estimated species richness. Species overlap was highest between the Central American sites, and lowest between the South American sites. 3Raid activity varied significantly among sites. Raid activity per kilometre of trail walks was over four times higher at the most active site (Sta. Maria, Venezuela) than at the least active site (Barro Colorado Island, Panama). Furthermore, each site showed a different diel pattern of activity. For example, raid activity was higher during daylight hours in Costa Rica, and higher at night in Venezuela. Raid activity relationships with ambient temperature also varied significantly among sites. 4The overall rate of army ant raids passing through 1 m2 plots was 0·73 raids per day, but varied among sites, from 0 raids per day (Panama) to 1·2 raids per day (Venezuela). 5Primarily subterranean species were significantly more abundant in Venezuela, and above-ground foragers that form large swarm fronts were least abundant in Panama. The site heterogeneity in species abundance and diel activity patterns has implications for army ant symbionts, including ant-following birds, and for the animals hunted by these top predators. [source]

    Local environmental effects and spatial effects in macroecological studies using mapped abundance classes: the case of the rook Corvus frugilegus in Scotland

    JOURNAL OF ANIMAL ECOLOGY, Issue 5 2006
    A. GIMONA
    Summary 1The study of the spatial pattern of species abundance is complicated by statistical problems, such as spatial autocorrelation of the abundance data, which lead to the confusion of environmental effects and dispersal. 2Atlas-derived data for the rook in Scotland are used as a case study to propose an approach for assessing the likely contribution of dispersal and local environmental effects, based on a Bayesian Conditional Autoregressive (CAR) approach. 3The availability of moist grasslands is a key factor explaining the spatial pattern of abundance. This is influenced by a combination of climatic and soil-related factors. A direct link to soil properties is for the first time reported for the wide-scale distribution of a bird species. In addition, for this species, dispersal seems to contribute significantly to the spatial pattern and produces a smoother than expected decline in abundance at the north-western edge of its distribution range. Areas where dispersal is most likely to be important are highlighted. 4The approach described can help ecologists make more efficient use of atlas data for the investigation of the structure of species abundance, and can highlight potential sink areas at the landscape and regional scale. 5Bayesian spatial models can deal with data autocorrelation in atlas-type data, while clearly communicating uncertainty through the estimation of the full posterior probability distribution of all parameters. [source]

    Looks are important: parasitic assemblages of agromyzid leafminers (Diptera) in relation to mine shape and contrast

    JOURNAL OF ANIMAL ECOLOGY, Issue 3 2004
    Adriana Salvo
    Summary 1We test the hypothesis that leaf mine appearance can affect the risk of leafminers being discovered by parasitoids, and therefore influence parasitic assemblages, using a comparative study of parasitic complexes associated with 28 agromyzid species in Central Argentina. Analyses were based on size, structure (defined as the number of species in host-range categories) and impact (percentage parasitism) of parasitic complexes on leafminers. Mine appearance was defined in terms of shape (linear, linear-blotch, blotch) and colour (high or low contrast with the leaf lamina). 2Irrespective of the agromyzid species involved, significant differences were found in the structure of the parasitoid complexes: specialists were more abundant and generalists rarer than expected in blotch and cryptically coloured mines. 3There were no differences in average parasitoid species richness and parasitism rates among differently coloured or shaped galleries. However, mine appearance significantly affected parasitic assemblage structure, with shape driving generalist species richness and contrast influencing that of specialists. Mine shape also affected parasitism rates, which were highest for generalists in linear mines, and for specialists in blotch mines. The existence of a gradient of discovery from the cryptically coloured blotch mines to the most apparent highly contrasting linear ones was supported by significant correlations of this gradient with richness and parasitism rates of generalist and specialist parasitoids. 4Taxonomic composition of parasitic complexes (analysed through parasitoid species abundance) was separated significantly according to host mine shape. An even more significant classification of assemblages was achieved when the combination of mine shape and colour was considered in the discoverability gradient. 5Our results suggest that despite leaf mines being an ecologically homogeneous resource, their morphology might offer varying degrees of refuge against different parasitoids. [source]

    Predicting abundance from occupancy: a test for an aggregated insect assemblage

    JOURNAL OF ANIMAL ECOLOGY, Issue 3 2003
    M. Warren
    Summary 1The ubiquitous, positive abundance-occupancy relationship is of potential value to conservation and pest management because of the possibility of using it to predict species abundance from occupancy measures. 2He & Gaston (2000a) developed a model, and a parameterization method, for the prediction of abundance from occupancy based on the negative binomial distribution. There are to date few empirical tests of either the estimation method or model. Here we conduct such a test in a field-based mesocosm experiment using a Drosophilidae assemblage associated with decaying fruit. 3With individual (and groups of) fruit as minimum mapping units, abundance estimates derived using the parameterization method of the He-Gaston model differed significantly from measured values, and were least accurate for the most abundant species. 4Substitution of k -values corrected for species density in the model did not improve abundance predictions significantly. However, substitution of k -values calculated directly from the negative binomial distribution yielded highly accurate abundance predictions. 5Although the distribution of fly species did not deviate significantly from the negative binomial distribution, and the finest possible minimum mapping units were used (individual fruit), the parameterization method in the He-Gaston model consistently underestimated the abundance of species in the assemblage because individuals were very highly aggregated within fruit. 6Because of its potential importance, this model and parameterization method require further exploration at fine scales, commonly represented by individual habitat units, for highly aggregated species. The incorporation of spatially explicit information may provide a means of improving abundance predictions in this regard. [source]

    Should biomass be considered more frequently as a currency in terrestrial arthropod community analyses?

    JOURNAL OF APPLIED ECOLOGY, Issue 2 2007
    MICHEL SAINT-GERMAIN
    Summary 1Community structure involving large taxonomical groups is frequently used to assess changes in ecosystems along environmental gradients or in response to disturbance. For terrestrial arthropods, abundance is generally used as the response variable in community data analyses; biomass, however, is generally a better indicator of the functionality of a species within a community, as it is strongly correlated with metabolism. 2In this study, we considered whether biomass should be used more often in community analyses with terrestrial arthropod biodiversity data, particularly when asking questions involving strong functional components. We selected 10 previously published and five unpublished Coleoptera abundance data sets, and produced biomass species-by-sample matrices using body length to body mass conversion equations, and then compared the results obtained using commonly used ecological analyses. 3Correlations between species abundance and biomass varied from strong to poor, depending on the taxa considered and on the sampling method used. We show that abundance and biomass can produce different results in community data analysis and lead to alternative interpretations for data sets with poor abundance to biomass correlations. 4Synthesis and applications. When dealing with databases showing poor abundance to biomass relationships, the question of the relevance of using biomass instead of abundance emerges, and the choice of the response variable to be used in analyses should be considered carefully. At the very least, when studying terrestrial arthropod biodiversity, one should consider the use of biomass with simple conversion equations that do not require obtaining the mass of individual specimens. This approach may lead to different interpretations. For research questions in which trophic interactions may play an important role, biomass may provide a broader and more accurate picture of the processes driving changes in community structure. [source]