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Soil Profile (soil + profile)
Selected AbstractsCarbon monoxide uptake kinetics in unamended and long-term nitrogen-amended temperate forest soilsFEMS MICROBIOLOGY ECOLOGY, Issue 3 2006Alvarus S. K. Chan Abstract The effect of nitrogen (N) additions on the dynamics of carbon monoxide consumption in temperate forest soils is poorly understood. We measured soil CO profiles, potential rates of CO consumption and uptake kinetics in temperate hardwood and pine control plots and plots amended with 50 and 150 kg N ha,1 year,1 for more than 15 years. Soil profiles of CO concentrations were above atmospheric levels in the high-N plots of both stands, suggesting that in these forest soils the balance between consumption and production may be shifted so that either production is increased or consumption decreased. Highest rates of CO consumption were measured in the organic horizon and decreased with soil depth. In the N-amended plots, CO consumption increased in all but one soil depth of the hardwood stand, but decreased in all soil depths of the pine stand. CO enzyme affinities increased with soil depth in the control plots. However, enzyme affinities in the most active soil depths (organic and 0,5 cm mineral) decreased in response to low levels of N in both stands. In the high-N plots, affinities dramatically-increased in the hardwood stand, but decreased in the organic horizon and increased slightly in the 0,5 cm mineral soil in the pine stand. These findings indicate that long-term N addition either by fertilization or deposition may alter the size, composition and/or physiology of the community of CO consumers so that their ability to act as a sink for atmospheric CO has changed. This change could have a substantial effect on the lifetime of greenhouse gases such as CH4 and therefore the future of Earth's climate. [source] Stable carbon isotope signature of ancient maize agriculture in the soils of Motul de San José, GuatemalaGEOARCHAEOLOGY: AN INTERNATIONAL JOURNAL, Issue 3 2007Elizabeth A. Webb Soil profiles collected from a 2.5-km transect radiating from the Maya center of Motul de San José were analyzed for the stable carbon-isotope composition of their soil organic matter. The residues of maize (Zea mays), the only C4 plant known to have been cultivated in this area by the ancient Maya, impart a carbon-isotope signature to the underlying soil organic matter reservoir that is distinct from that produced by the native C3 forest vegetation. The varying turnover rates of the humic acid and humin fractions of the soil organic matter allowed us to distinguish between the presence of modern and ancient maize residues in these soils, and to delineate the lateral extent of maize cultivation at this ancient Maya site. The strongest isotopic evidence of maize residues is preserved in the soils surrounding the peripheral settlement of Chäkokot and at one locality within the urban center of Motul de San José. © 2007 Wiley Periodicals, Inc. [source] Integration of magnetism and heavy metal chemistry of soils to quantify the environmental pollution in Kathmandu, NepalISLAND ARC, Issue 4 2005Pitambar Gautam Abstract Soil profiles of the Kathmandu urban area exhibit significant variations in magnetic susceptibility (,) and saturation isothermal remanence (SIRM), which can be used to discriminate environmental pollution. Magnetic susceptibility can be used to delineate soil intervals by depth into normal (< 10,7 m3/kg), moderately enhanced (10,7,< 10,6 m3/kg) and highly enhanced (, 10,6 m3/kg). Soils far from roads and industrial sites commonly fall into the ,normal' category. Close to a road corridor, soils at depths of several centimeters have the highest ,, which remains high within the upper 20 cm interval, and decreases with depth through ,moderately magnetic' to ,normal' at approximately 30,40 cm. Soils in the upper parts of profiles in urban recreational parks have moderate ,. Soil SIRM has three components of distinct median acquisition fields (B1/2): soft (30,50 mT, magnetite-like phase), intermediate (120,180 mT, probably maghemite or soft coercivity hematite) and hard (550,600 mT, hematite). Close to the daylight surface, SIRM is dominated by a soft component, implying that urban pollution results in enrichment by a magnetite-like phase. Atomic absorption spectrometry of soils from several profiles for heavy metals reveals remarkable variability (ratio of maximum to minimum contents) of Cu (16.3), Zn (14.8) and Pb (9.3). At Rani Pokhari, several metals are well correlated with ,, as shown by a linear relationship between the logarithmic values. At Ratna Park, however, both , and SIRM show significant positive correlation with Zn, Pb and Cu, but poor and even negative correlation with Fe (Mn), Cr, Ni and Co. Such differences result from a variety of geogenic, pedogenic, biogenic and man-made factors, which vary in time and space. Nevertheless, for soil profiles affected by pollution (basically traffic-related), , exhibits a significant linear relationship with a pollution index based on the contents of some urban elements (Cu, Pb, Zn), and therefore it serves as an effective parameter for quantifying the urban pollution. [source] Seismic microzonation of the greater Bangkok area using microtremor observationsEARTHQUAKE ENGINEERING AND STRUCTURAL DYNAMICS, Issue 2 2004Rabin Tuladhar Abstract Bangkok, the capital city of Thailand, is located at a remote distance from seismic sources. However, it has a substantial risk from these distant earthquakes due to the ability of the underlying soft clay to amplify ground motions. It is therefore imperative to conduct a detailed seismic hazard assessment of the area. Seismic microzonation of big cities, like Bangkok, provides a basis for site-specific hazard analysis, which can assist in systematic earthquake mitigation programs. In this study, a seismic microzonation map for the greater Bangkok area is constructed using microtremor observations. Microtremor observations were carried out at more than 150 sites in the greater Bangkok area. The predominant periods of the ground were determined from the horizontal-to-vertical (H/V) spectral ratio technique. A microzonation map was then developed for the greater Bangkok area based on the observations. Moreover, the transfer functions were calculated for the soil profile at eight sites, using the computer program SHAKE91, to validate the results from the microtremor analysis. The areas near the Gulf of Thailand, underlaid by a thick soft clay layer, were found to have long natural periods ranging from 0.8s to 1.2s. However, the areas outside the lower central plain have shorter predominant periods of less than 0.4s. The study shows that there is a great possibility of long-period ground vibration in Bangkok, especially in the areas near the Gulf of Thailand. This may have severe effects on long-period structures, such as high-rise buildings and long-span bridges. Copyright © 2003 John Wiley & Sons, Ltd. [source] Mechanistic assessment of hillslope transpiration controls of diel subsurface flow: a steady-state irrigation approachECOHYDROLOGY, Issue 2 2010H. R. Barnard Abstract Mechanistic assessment of how transpiration influences subsurface flow is necessary to advance understanding of catchment hydrology. We conducted a 24-day, steady-state irrigation experiment to quantify the relationships among soil moisture, transpiration and hillslope subsurface flow. Our objectives were to: (1) examine the time lag between maximum transpiration and minimum hillslope discharge with regard to soil moisture; (2) quantify the relationship between diel hillslope discharge and daily transpiration; and (3) identify the soil depth from which trees extract water for transpiration. An 8 × 20 m hillslope was irrigated at a rate of 3·6 mm h,1. Diel fluctuations in hillslope discharge persisted throughout the experiment. Pre-irrigation time lags between maximum transpiration and minimum hillslope discharge were 6·5 h, whereas lags during steady-state and post-irrigation conditions were 4 and 2 h, respectively. The greatest correlation between transpiration and hillslope discharge occurred during the post-irrigation period, when the diel reduction in hillslope discharge totalled 90% of total measured daily transpiration. Daily transpiration of trees within the irrigated area remained relatively constant throughout the experiment. Diel fluctuations in soil moisture were greatest at a depth of 0·9,1·2 m prior to irrigation and became more uniform throughout the soil profile during and post-irrigation. This study clearly demonstrates that when soil moisture is high, hillslope trees can be an important factor in diel fluctuations in stream discharge. We advance a conceptual model for the site whereby the relationship between transpiration and hillslope discharge is a function of soil moisture status and drainable porosity. Copyright © 2010 John Wiley & Sons, Ltd. [source] Woody plants modulate the temporal dynamics of soil moisture in a semi-arid mesquite savanna,ECOHYDROLOGY, Issue 1 2010Daniel L. Potts Abstract Climate variability and human activities interact to increase the abundance of woody plants in arid and semi-arid ecosystems worldwide. How woody plants interact with rainfall to influence patterns of soil moisture through time, at different depths in the soil profile and between neighboring landscape patches is poorly known. In a semi-arid mesquite savanna, we deployed a paired array of sensors beneath a mesquite canopy and in an adjacent open area to measure volumetric soil water content (,) every 30 min at several depths between 2004 and 2007. In addition, to quantify temporally dynamic variation in soil moisture between the two microsites and across soil depths we analysed , time-series using fast Fourier transforms (FFT). FFT analyses were consistent with the prediction that by reducing evaporative losses through shade and reducing rainfall inputs through canopy interception of small rainfall events, the mesquite canopy was associated with a decline in high-frequency (hour-to-hour and day-to-day) variation in shallow ,. Finally, we found that, in both microsites, high-frequency , variation declined with increasing soil depth as the influence of evaporative losses and inputs associated with smaller rainfall events declined. In this case, we argue that the buffering of shallow soil moisture against high-frequency variations can enhance nutrient cycling and alter the carbon cycle in dryland ecosystems. Copyright © 2009 John Wiley & Sons, Ltd. [source] Comparative seed ecology of the endangered shrub, Pimelea spicata and a threatening weed, Bridal Creeper: Smoke, heat and other fire-related germination cuesECOLOGICAL MANAGEMENT & RESTORATION, Issue 1 2003Anthony J. Willis SummaryPimelea spicata R. Br. is a nationally listed endangered Australian shrub threatened with extinction by habitat fragmentation and environmental weed invasion. Bridal Creeper (Asparagus asparagoides L. W. Wight) is the primary weed threat to the largest remaining populations of P. spicata in the Cumberland Plain. Fire, as part of an integrated pest management program, offers the potential to stimulate P. spicata populations while controlling Bridal Creeper. It is important, therefore, to understand how the components of fire affect the germination and growth of both species. Using laboratory experiments we investigated the effects of smoke, heat, ash and/or light on the germination of P. spicata and Bridal Creeper. We found a significant promotive effect of smoke and indication of an inhibitory heat shock (90°C for 10 min) effect on the germination of P. spicata seeds. The response of Bridal Creeper seeds to the same factors was complex; while the results of one experiment suggested an inhibitory effect of smoke and a promotive effect of heat, subsequent trials were contradictory, implying that Bridal Creeper, like many weeds, is able to germinate under a wide range of environmental conditions. Other experiments investigated the optimal germination temperature and innate dormancy of P. spicata in the absence of fire-related germination cues. Of the incubation temperatures investigated, the optimal diurnally fluctuating regime for P. spicata germinations was 10°C and 20°C in the night and day, respectively. The innate dormancy of freshly produced seeds disappeared after 3 months. In contrast to Bridal Creeper, we found a persistent germinable seed bank of about 97 P. spicata seeds/m2 located in the top 5 cm of the soil profile. While fire alone is unlikely to kill Bridal Creeper plants, fire may help to manage local infestations of the weed by limiting germination and providing opportunity for herbicide treatment of regrowth. [source] Temporal and spatial monitoring of mobile nanoparticles in a vineyard soil: evidence of nanoaggregate formationEUROPEAN JOURNAL OF SOIL SCIENCE, Issue 4 2010N. Perdrial Mechanisms of formation, stabilization, liberation, transport and deposition of nanoparticles and their relationship to contaminant transport remain scarcely investigated in natural porous media. This study investigated nanoparticles mobilized in the pore space of a French vineyard soil by observing mobile soil-derived organic matter (SOM) and minerals in pore fluids over an 8-month monitoring period. Samples were collected in situ and investigated by transmission electron microscopy coupled to electron-dispersive spectroscopy. The main types of nanoparticles transported within the soil were clay, bacteria, SOM and nanoaggregates. Nanometric clay particles were enriched in various metals (Fe, Zn, As and Pb) and organically-derived constituents. Analyses of bacteria showed enrichments in Pb. SOM consisted of small carbon-based particles (<200 nm) with slight enrichments in various metals. The fourth dominant particle type consisted of the association of particles forming organo-mineral nanoaggregates. Based on the study of more than 22 500 individual particles, we propose a schematic interpretation of the evolution of the distribution of particles with depth in a soil profile. The increase of nanoaggregates with depth in the soil seemed to be largely controlled by the ionic strength of soil water and soil hydrodynamics. Seasonal variations in temperature also appear to affect nanoaggregation. Based on the architecture of the nanoaggregates, we propose an improvement of pre-existing models of microaggregation by focusing on early aggregation stages suggesting the importance of bacteria and electrostatic interactions. The process of nanoaggregation can enhance the net reactivity of soil with respect to transported suspended matter, including heavy metals, and can initiate the process of C sequestration. [source] Antioxidants in soil organic matter and in associated plant materialsEUROPEAN JOURNAL OF SOIL SCIENCE, Issue 2 2009D. L. Rimmer Summary The presence of antioxidants in soil could have a significant effect on the dynamics of soil organic matter. In this paper we report some preliminary experiments, which demonstrate that antioxidants can be extracted from soils and that the quantities vary from soil to soil. Extraction with 1.0 m NaOH was effective, and this was then used on a range of mineral and organic soils, and the antioxidant capacity of the resulting extracts was measured. The antioxidant capacities obtained were positively correlated with soil carbon contents and with the dissolved organic carbon contents of the extracts. Expressing the data per mass of soil carbon showed that the antioxidants generally decreased with depth in the soil profile, suggesting that they were subject to degradation during humification. In a follow-up study, soil, litter and fresh plant samples were collected from 15 sites with a wide variety of vegetation types and analysed for their antioxidant capacities. The aim was to show that the antioxidant capacities in the soils were related to the antioxidant capacities of the fresh plant material and/or litter above. The antioxidant capacities of the soil samples were less than those in either fresh material or litter. While there was a significant positive relationship between the antioxidant capacities of fresh material and litter, no relationship existed between the antioxidant capacities of the soils and those of either fresh material or litter. [source] Size and phenotypic structure of microbial communities within soil profiles in relation to different playing areas on a UK golf courseEUROPEAN JOURNAL OF SOIL SCIENCE, Issue 5 2008M. D. Bartlett Summary Amenity turf accounts for up to 4% of land-use in urban areas, providing key refuges for both above- and below-ground biodiversity. Golf courses occupy the largest surface area of all sports facilities; however, only a limited amount of microbial ecology has been carried out to investigate differences in the size and structure of microbial communities of the soil. The soil microbial community is a key agent in nutrient cycling and delivery of other ecosystem goods and services; however, there has been little work focused on amenity turf ecosystems in the UK. A study of soil microbial community size and structure, on the range of playing areas maintained for the game of golf at a single golf course in relation to depth through the soil profile, was carried out. Soil from different playing areas showed significant differences in the size (measured using chloroform fumigation extraction) of the microbial community (P < 0.01), with a greater concentration of microbial biomass at 0,75 mm from the surface, compared with deeper zones (P < 0.01). Principal component analysis of phospholipid fatty acid (PLFA) biomarkers indicated that the community structure was significantly different at 0,75 mm from the surface on all areas of the golf course investigated (P < 0.05, in all cases). The PLFA biomarkers consistently associated with such discrimination were 16:0 and 18:1,9 c. These findings suggest that there is a consistently larger and similarly structured microbial community associated with the surface thatch layer, commonly found in amenity turf. [source] Transformation of haematite and Al-poor goethite to Al-rich goethite and associated yellowing in a ferralitic clay soil profile of the middle Amazon Basin (Manaus, Brazil)EUROPEAN JOURNAL OF SOIL SCIENCE, Issue 5 2005E. Fritsch Summary The red and yellow colours of ferralitic soils in the tropics have for long intrigued pedologists. We have investigated the upward yellowing in a 10-m thick profile representative of the Ferralsols of the plateaux of the Manaus region of Brazil. We determined changes in the nature and crystal chemistry of their Fe oxides by optical and Mössbauer spectroscopy as well as Rietveld refinement of X-ray diffraction patterns. We attribute the upward yellowing of the soil to a progressive transformation of the Fe oxides at nearly invariant iron contents. Aluminium in contrast is strongly mobilized in the uppermost clay-depleted topsoil where there is preferential dissolution of kaolinite and crystallization of gibbsite. Haematite decreases from 35 to 10% of the Fe oxides from the bottom to the top of the profile and the particles become smaller (75,10 nm). Its Al for Fe-substitution remains almost unchanged (10,15 mol %). The average Al-substitution rate of goethite increases from 25 to 33 mol %, and its mean crystal diameter remains in the range 20,40 nm. The proportion of Al-rich goethite (33 mol %) increases at the expense of less Al-substituted Fe oxides (haematite and goethite). This conversion with restricted transfer of iron means that the amount of Al stored in Fe oxides gradually increases. Kaolinite, haematite and Al-poor goethite are thus witnesses of earlier stages of ferralitization of the soil. In contrast, Al-rich goethite and gibbsite initiate the alitization (or bauxitization) of the soil. They correspond to the last generation of soil minerals, which most likely reflects the present-day weathering conditions. The progressive replacement of kaolinite, haematite and Al-poor goethite by new generations of Al-rich goethite and gibbsite attests to greater activities of water and aluminium and smaller activity of aqueous silica in the topsoil than in the subsoil. We interpret this as a consequence of longer periods of wetting in the topsoil that could result from soil aging, more humid climate or both. [source] Water-repellent soil and its relationship to granularity, surface roughness and hydrophobicity: a materials science viewEUROPEAN JOURNAL OF SOIL SCIENCE, Issue 4 2005G. McHale Summary Considerable soil water repellency has been observed at a wide range of locations worldwide. The soil exhibiting water repellency is found within the upper part of the soil profile. The reduced rate of water infiltration into these soils leads to severe runoff erosion, and reduction of plant growth. Soil water repellency is promoted by drying of soil, and can be induced by fire or intense heating of soil containing hydrophobic organic matter. Recent studies outside soil science have shown how enhancement of the natural water repellency of materials, both porous and granular, by surface texture (i.e. surface roughness, pattern and morphology) into super-hydrophobicity is possible. The similarities between these super-hydrophobic materials and observed properties of water-repellent soil are discussed from a non-soil scientist, materials-based perspective. A simple model is developed for a hydrophobic granular surface and it is shown that this can provide a mechanism for enhancement of soil water repellency through the relative size and spacing of grains and pores. The model provides a possible explanation for why soil water repellency should be more prevalent under dry conditions than wet. Consequences for water runoff, raindrop splash and soil erosion are discussed. [source] Sorption and leaching behaviour of polar aromatic acids in agricultural soils by batch and column leaching testsEUROPEAN JOURNAL OF SOIL SCIENCE, Issue 3 2005R. Celis Summary Aromatic acids can reach the soil from direct anthropogenic activities or, indirectly, from the degradation of many aromatic compounds, such as pesticides or polycyclic aromatic hydrocarbons. Because of the anionic character of aromatic acids at the pH of most soil and sediment environments, they are expected to move rapidly through the soil profile and to pose a great risk of ground water contamination. We designed batch and column leaching tests to characterize the behaviour of three aromatic acids differing in their chemical structures, picloram (4-amino-3,5,6-trichloropicolinic acid), phthalic acid (2,2-benzenedicarboxylic acid), and salicylic acid (2-hydroxybenzoic acid), in four European soils with different physicochemical characteristics. Batch experiments revealed that the persistence of the three acids in soil:water suspensions decreased in the order: picloram , phthalic acid > salicylic acid, and their dissipation curves were relatively independent of soil type. Sorption by the soils, their clay-size fractions and model sorbents indicated much greater affinity of soil constituents for salicylic acid than for picloram or phthalic acid, most likely due to the ability of salicylic acid to form bidentate complexes with positively charged soil components. The extent of leaching of the aromatic acids in hand-packed soil columns decreased in the order: picloram (90,96%) > phthalic acid (25,90%) > salicylic acid (0,37%), which was consistent with the sorption and persistence results of the batch tests. The organic C content, the amount of small-size pores, and the initial concentration of aromatic acid in soil appeared to be important factors influencing the leaching patterns of phthalic acid and salicylic acid in the soils studied, but did not greatly influence the leaching pattern of picloram. Sorption and leaching of polar aromatic acids in soil can therefore vary considerably depending on the structural characteristics of the aromatic acid or soil type. [source] Preferential phosphorus leaching from an irrigated grassland soilEUROPEAN JOURNAL OF SOIL SCIENCE, Issue 2 2005G. S. Toor Summary Intact lysimeters (50 cm diameter, 70 cm deep) of silt loam soil under permanent grassland were used to investigate preferential transport of phosphorus (P) by leaching immediately after application of dairy effluent. Four treatments that received mineral P fertilizer alone (superphosphate at 45 kg P ha,1 year,1) or in combination with effluent (at , 40,80 kg P ha,1 year,1) over 2 years were monitored. Losses of total P from the combined P fertilizer and effluent treatments were 1.6,2.3 kg ha,1 (60% of overall loss) during eight drainage events following effluent application. The rest of the P lost (40% of overall loss) occurred during 43 drainage events following a significant rainfall or irrigation compared with 0.30 kg ha,1 from mineral P fertilizer alone. Reactive forms of P (mainly dissolved reactive P: 38,76%) were the dominant fractions in effluent compared with unreactive P forms (mainly particulate unreactive P: 15,56%). In contrast, in leachate following effluent application, particulate unreactive P was the major fraction (71,79%) compared with dissolved reactive P (1,7%). The results were corroborated by 31P nuclear magnetic resonance analysis, which showed that inorganic orthophosphate was the predominant P fraction present in the effluent (86%), while orthophosphate monoesters and diesters together comprised up to 88% of P in leachate. This shows that unreactive P forms were selectively transported through soil because of their greater mobility as monoesters (labile monoester P and inositol hexakisphosphate) and diesters. The short-term strategies for reducing loss of P after application of dairy effluent application should involve increasing the residence time of applied effluent in the soil profile. This can be achieved by applying effluent frequently in small amounts. [source] Edaphic and physiographic factors affecting the distribution of natural gamma-emitting radionuclides in the soils of the Arnás catchment in the Central Spanish PyreneesEUROPEAN JOURNAL OF SOIL SCIENCE, Issue 4 2002A. Navas Summary Gamma-emitting radionuclides are a natural source of radiation that can be a concern for human health, therefore it is important to know the radionuclide backgrounds in soils and to assess their mobility and transfer in ecosystems. Concentrations of natural radionuclides were determined in soils from a small catchment in the middle mountain environment of the Central Spanish Pyrenees. Radioisotope activities were well within the natural ranges for soil, averaging 27, 26, 32 and 500 Bq kg,1 for 238U, 226Ra, 208Tl and 40K, respectively. Their distributions in the soil profile were analysed along three transects of contrasting physiography and soil type. Uranium was depleted in upper layers of the soil and slightly enriched in deeper sections, while 226Ra, 40K and 208Tl were more uniformly distributed. Radionuclide activities in the Calcaric Regosols on the shrub slope were less than those in the deeper and better developed Haplic Kastanozems under forest and in Calcaric Fluvisols in the valley bottom. These spatial patterns seem to be affected by the soil type; other landscape features, such as slope orientation and vegetation cover, appeared to have an indirect effect. The results indicate that the depth distribution of the radionuclides is affected by some soil properties, including pH, carbonates, organic matter and particle size, and soil processes, such as leaching and adsorption. [source] Abandoned anthills of Formica polyctena and soil heterogeneity in a temperate deciduous forest: morphology and organic matter compositionEUROPEAN JOURNAL OF SOIL SCIENCE, Issue 3 2001S. M. Kristiansen Summary Ants can modify the properties of soil when they build their nests. We have investigated the degree and persistency of changes of soil morphology and chemistry in abandoned anthills in a temperate, deciduous wood in Jutland, Denmark. For this purpose, we sampled surface soils (0,10 cm) from each of five abandoned anthills (Formica polyctena Förster) and adjacent undisturbed sites, where anthills covered about 0.5% of the surface area. In addition, one soil profile in an abandoned anthill was sampled for morphological descriptions. All samples were analysed for pH, C, N, lignin-derived phenol, and cellulosic and non-cellulosic carbohydrate concentrations. The results showed that soils under the anthills were enriched in organic matter, were yellower and showed features of Podzol degradation. Former Podzols had to be reclassified to Umbrisols or Arenosols, whereas anthills on Luvisols affected soil classification only at the subdivision level. The C/N ratio and soil pH were not significantly affected by the ants' activity. However, lignin-derived phenols and cellulosic polysaccharides were enriched inside the mounds by a factor of 6 and 7, respectively. This probably reflected collection of woody debris for nest construction while the nest was occupied, and large input of C from an increased root density. The degree of changes in the quality of the organic matter decreased with time since abandonment, but changes were still detectable within anthills left 20 years ago. As ant colonies are concentrated, and move regularly on a decadal timescale, formation of Formica anthills has an intrinsic influence on the heterogeneity of the soil within this forest ecosystem. [source] Functional microbial community response to nutrient pulses by artificial groundwater recharge practice in surface soils and subsoilsFEMS MICROBIOLOGY ECOLOGY, Issue 3 2010Kirsten Schütz Abstract Subsurface microorganisms are essential constituents of the soil purification processes associated with groundwater quality. In particular, soil enzyme activity determines the biodegradation of organic compounds passing through the soil profile. Transects from surface soil to a depth of 3.5 m were investigated for microbial and chemical soil characteristics at two groundwater recharge sites and one control site. The functional diversity of the microbial community was analyzed via the activity of eight enzymes. Acid phosphomonoesterase was dominant across sites and depths, followed by l -leucine aminopeptidase and ,-glucosidase. Structural [e.g. phospholipid fatty acid (PLFA) pattern] and functional microbial diversities were linked to each other at the nonwatered site, whereas amendment with nutrients (DOC, NO3,) by flooding uncoupled this relationship. Microbial biomass did not differ between sites, whereas microbial respiration was the highest at the watered sites. Hence, excess nutrients available due to artificial groundwater recharge could not compensate for the limitation by others (e.g. phosphorus as assigned by acid phosphomonoesterase activity). Instead, at a similar microbial biomass, waste respiration via overflow metabolism occurred. In summary, ample supply of carbon by flooding led to a separation of decomposition and microbial growth, which may play an important role in regulating purification processes during groundwater recharge. [source] Aboveground plant biomass, carbon, and nitrogen dynamics before and after burning in a seminatural grassland of Miscanthus sinensis in Kumamoto, JapanGCB BIOENERGY, Issue 2 2010YO TOMA Abstract Although fire has been used for several thousand years to maintain Miscanthus sinensis grasslands in Japan, there is little information about the nutrient dynamics in these ecosystems immediately after burning. We investigated the loss of aboveground biomass; carbon (C) and nitrogen (N) dynamics; surface soil C change before and after burning; and carbon dioxide (CO2), methane (CH4), and nitrous oxide (N2O) fluxes 2 h after burning in a M. sinensis grassland in Kumamoto, Japan. We calculated average C and N accumulation rates within the soil profile over the past 7300 years, which were 58.0 kg C ha,1 yr,1 and 2.60 kg N ha,1 yr,1, respectively. After burning, 98% of aboveground biomass and litter were consumed. Carbon remaining on the field, however, was 102 kg C ha,1. We found at least 43% of C was possibly lost due to decomposition. However, remaining C, which contained ash and charcoal, appeared to contribute to C accumulation in soil. There was no difference in the amount of 0,5 cm surface soil C before and after burning. The amount of remaining litter on the soil surface indicated burning appeared not to have caused a reduction in soil C nor did it negatively impact the sub-surface vegetative crown of M. sinensis. Also, nearly 50 kg N ha,1 of total aboveground biomass and litter N was lost due to burning. Compared with before the burning event, postburning CO2 and CH4 fluxes from soil appeared not to be directly affected by burning. However, it appears the short time span of measurements of N2O flux after burning sufficiently characterized the pattern of increasing N2O fluxes immediately after burning. These findings indicate burning did not cause significant reductions in soil C nor did it result in elevated CO2 and CH4 emissions from the soil relative to before the burning event. [source] Carbon sequestration under Miscanthus: a study of 13C distribution in soil aggregatesGCB BIOENERGY, Issue 5 2009MARTA DONDINI Abstract The growing of bioenergy crops has been widely suggested as a key strategy in mitigating anthropogenic CO2 emissions. However, the full mitigation potential of these crops cannot be assessed without taking into account their effect on soil carbon (C) dynamics. Therefore, we analyzed the C dynamics through four soil depths under a 14-year-old Miscanthus plantation, established on former arable land. An adjacent arable field was used as a reference site. Combining soil organic matter (SOM) fractionation with 13C natural abundance analyses, we were able to trace the fate of Miscanthus -derived C in various physically protected soil fractions. Integrated through the whole soil profile, the total amount of soil organic carbon (SOC) was higher under Miscanthus than under arable crop, this difference was largely due to the input of new C. The C stock of the macroaggregates (M) under Miscanthus was significantly higher than those in the arable land. Additionally, the C content of the micro-within macroaggregates (mM) were higher in the Miscanthus soil as compared with the arable soil. Analysis of the intramicroaggregates particulate organic matter (POM) suggested that the increase C storage in mM under Miscanthus was caused by a decrease in disturbance of M. Thus, the difference in C content between the two land use systems is largely caused by soil C storage in physically protected SOM fractions. We conclude that when Miscanthus is planted on former arable land, the resulting increase in soil C storage contributes considerably to its CO2 mitigation potential. [source] Vertical partitioning of CO2 production within a temperate forest soilGLOBAL CHANGE BIOLOGY, Issue 6 2006ERIC A. DAVIDSON Abstract The major driving factors of soil CO2 production , substrate supply, temperature, and water content , vary vertically within the soil profile, with the greatest temporal variations of these factors usually near the soil surface. Several studies have demonstrated that wetting and drying of the organic horizon contributes to temporal variation in summertime soil CO2 efflux in forests, but this contribution is difficult to quantify. The objectives of this study were to partition CO2 production vertically in a mixed hardwood stand of the Harvard Forest, Massachusetts, USA, and then to use that partitioning to evaluate how the relative contributions of CO2 production by genetic soil horizon vary seasonally and interannually. We measured surface CO2 efflux and vertical soil profiles of CO2 concentration, temperature, water content, and soil physical characteristics. These data were applied to a model of effective diffusivity to estimate CO2 flux at the top of each genetic soil horizon and the production within each horizon. A sensitivity analysis revealed sources of uncertainty when applying a diffusivity model to a rocky soil with large spatial heterogeneity, especially estimates of bulk density and volumetric water content and matching measurements of profiles and surface fluxes. We conservatively estimate that the O horizon contributed 40,48% of the total annual soil CO2 efflux. Although the temperature sensitivity of CO2 production varied across soil horizons, the partitioning of CO2 production by horizon did not improve the overall prediction of surface CO2 effluxes based on temperature functions. However, vertical partitioning revealed that water content covaried with CO2 production only in the O horizon. Large interannual variations in estimates of O horizon CO2 production indicate that this layer could be an important transient interannual source or sink of ecosystem C. [source] Tracing solute infiltration using a combined method of dye tracer test and electrical resistivity tomography in an undisturbed forest soil profileHYDROLOGICAL PROCESSES, Issue 21 2010Jae Gon Kim Abstract An accurate prediction of solute infiltration in a soil profile is important in the area of environmental science, groundwater and civil engineering. We examined the infiltration pattern and monitored the infiltration process using a combined method of dye tracer test and electrical resistivity tomography (ERT) in an undisturbed field soil (1 m × 1 m). A homogeneous matrix flow was observed in the surface soil (A horizon), but a preferential flow along macropores and residual rock structure was the dominant infiltration pattern in the subsurface soil. Saturated interflow along the slopping boundaries of A and C1 horizons and of an upper sandy layer and a lower thin clay layer in the C horizon was also observed. The result of ERT showed that matrix flow started first in A horizon and then the infiltration was followed by the preferential flows along the sloping interfaces and macropores. The ERT did not show as much detail as the dye-stained image for the preferential flow. However, the area with the higher staining density where preferential flow was dominant showed a relatively lower electrical resistivity. The result of this study indicates that ERT can be applied for the monitoring of solute transportation in the vadose zone. Copyright © 2010 John Wiley & Sons, Ltd. [source] Modelling investigation of water partitioning at a semiarid ponderosa pine hillslopeHYDROLOGICAL PROCESSES, Issue 9 2010Huade Guan Abstract The effects of vegetation root distribution on near-surface water partitioning can be two-fold. On the one hand, the roots facilitate deep percolation by root-induced macropore flow; on the other hand, they reduce the potential for deep percolation by root-water-uptake processes. Whether the roots impede or facilitate deep percolation depends on various conditions, including climate, soil, and vegetation characteristics. This paper examines the effects of root distribution on deep percolation into the underlying permeable bedrock for a given soil profile and climate condition using HYDRUS modelling. The simulations were based on previously field experiments on a semiarid ponderosa pine (Pinus ponderosa) hillslope. An equivalent single continuum model for simulating root macropore flow on hillslopes is presented, with root macropore hydraulic parameterization estimated based on observed root distribution. The sensitivity analysis results indicate that the root macropore effect dominates saturated soil water flow in low conductivity soils (Kmatrix below 10,7 m/s), while it is insignificant in soils with a Kmatrix larger than 10,5 m/s, consistent with observations in this and other studies. At the ponderosa pine site, the model with simple root-macropore parameterization reasonably well reproduces soil moisture distribution and some major runoff events. The results indicate that the clay-rich soil layer without root-induced macropores acts as an impeding layer for potential groundwater recharge. This impeding layer results in a bedrock percolation of less than 1% of the annual precipitation. Without this impeding layer, percolation into the underlying permeable bedrock could be as much as 20% of the annual precipitation. This suggests that at a surface with low-permeability soil overlying permeable bedrock, the root penetration depth in the soil is critical condition for whether or not significant percolation occurs. Copyright © 2010 John Wiley & Sons, Ltd. [source] Modified passive capillary samplers for collecting samples of snowmelt infiltration for stable isotope analysis in remote, seasonally inaccessible watersheds 2: field evaluationHYDROLOGICAL PROCESSES, Issue 7 2010Marty D. Frisbee Abstract Twelve modified passive capillary samplers (M-PCAPS) were installed in remote locations within a large, alpine watershed located in the southern Rocky Mountains of Colorado to collect samples of infiltration during the snowmelt and summer rainfall seasons. These samples were collected in order to provide better constraints on the isotopic composition of soil-water endmembers in the watershed. The seasonally integrated stable isotope composition (,18O and ,2H) of soil-meltwater collected with M-PCAPS installed at shallow soil depths < 10 cm was similar to the seasonally integrated isotopic composition of bulk snow taken at the soil surface. However, meltwater which infiltrated to depths > 20 cm evolved along an isotopic enrichment line similar to the trendline described by the evolution of fresh snow to surface runoff from snowmelt in the watershed. Coincident changes in geochemistry were also observed at depth suggesting that the isotopic and geochemical composition of deep infiltration may be very different from that obtained by surface and/or shallow-subsurface measurements. The M-PCAPS design was also used to estimate downward fluxes of meltwater during the snowmelt season. Shallow and deep infiltration averaged 8·4 and 4·7 cm of event water or 54 and 33% of the measured snow water equivalent (SWE), respectively. Finally, dominant shallow-subsurface runoff processes occurring during snowmelt could be identified using geochemical data obtained with the M-PCAPS design. One soil regime was dominated by a combination of slow matrix flow in the shallow soil profile and fast preferential flow at depth through a layer of platy, volcanic rocks. The other soil regime lacked the rock layer and was dominated by slow matrix flow. Based on these results, the M-PCAPS design appears to be a useful, robust methodology to quantify soil-water fluxes during the snowmelt season and to sample the stable isotopic and geochemical composition of soil-meltwater endmembers in remote watersheds. Copyright © 2009 John Wiley & Sons, Ltd. [source] Soil water content and yield variability in vineyards of Mediterranean northeastern Spain affected by mechanization and climate variabilityHYDROLOGICAL PROCESSES, Issue 11 2006M. C. Ramos Abstract The objective of this paper was to analyse the combined influence of the Mediterranean climate variability (particularly the irregular rainfall distribution throughout the year) and the land transformations carried out in vineyards of northeastern Spain on soil water content evolution and its influence on grape production. The study was carried out in a commercial vineyard located in the Anoia,Alt Penedès region (Barcelona province, northeastern Spain), which was prepared for mechanization with important land transformations. Two plots were selected for the study: one with low degree of transformation of the soil profile, representing a non-disturbed situation, and the second one in which more than 3 m were cut in the upper part of the plot and filled in the lower part, representing the disturbed situation. Soil water content was evaluated at three positions along the slope in each plot and at three depths (0,20, 20,40, 40,60 cm) during the period 1999,2001, years with different rainfall characteristics, including extreme events and long dry periods. Rainfall was recorded in the experimental field using a pluviometer linked to a data-logger. Runoff rates and yield were evaluated at the same positions. For the same annual rainfall, the season of the year in which rainfall is recorded and its intensity are critical for water availability for crops. Soil water content varies within the plot and is related to the soil characteristics existing at the different positions of the landscape. The differences in soil depth created by soil movements in the field mechanization give rise to significant yield reductions (up to 50%) between deeper and shallow areas. In addition, for the same annual rainfall, water availability for crops depends on its distribution over the year, particularly in soils with low water-storage capacity. The yield was strongly affected in years with dry or very dry winters. Copyright © 2005 John Wiley & Sons, Ltd. [source] Defining hydrochemical evolution of streamflow through flowpath dynamics in Kawakami headwater catchment, Central JapanHYDROLOGICAL PROCESSES, Issue 10 2005Kasdi Subagyono Abstract The hydrochemical behaviour of catchments is often investigated by inferring stream chemistry through identification of source areas involved in hydrograph separation analysis, yet its dynamic evolution of hydrologic pathways has received little attention. Intensive hydrometric and hydrochemical measurements were performed during two different storms on March 29, 2001 and August 21,22, 2001 to define hydrochemical evolution under the dynamic of flow pathways in a 5·2 ha first-order drainage of the Kawakami experimental basin (KEB), Central Japan, a forested headwater catchment with various soil depths (1·8 to 5 m) overlying late Neogene of volcanic bedrocks. The hydraulic potential distribution and flow lines data showed that the change in flow direction, which was controlled by rainfall amount and antecedent wetness of the soil profile, agreed well with the hydrochemical change across the slope segment during the storm. Hydrograph separation predicted by end-member mixing analysis (EMMA) using Ca2+ and SiO2 showed that near surface riparian, hillslope soil water and deep riparian groundwater were important in stream flow generation. The evidence of decrease in solutes concentration at a depth of 1 m in the hillslope and 0·6 m in the near surface riparian during peak storm suggested a flushing of high solutes concentration. Most of the solutes accumulated in the deep riparian groundwater zone, which was due to prominent downward flow and agreed well with the residence time. The distinct flow pathways and chemistry between the near surface riparian and deep riparian groundwater zones and the linkage hillslope aquifer and near surface riparian reservoir, which controls rapid flow and solutes flushing during the storm event, are in conflict with the typical assumption that the whole riparian zone resets flow pathways and chemical signature of hillslope soil water, as has been reported in a previous study. Copyright © 2005 John Wiley & Sons, Ltd. [source] The zone of vegetation influence on baseflow revealed by diel patterns of streamflow and vegetation water use in a headwater basinHYDROLOGICAL PROCESSES, Issue 8 2002Barbara J. Bond Water use by vegetation can be closely linked to streamflow patterns on a variety of time scales. However, many of the details of these linkages are poorly understood. We compared diel (24 h) patterns of transpirational water use with streamflow patterns in a small headwater basin that displays a marked diel variation during summer months. The study site was in western Oregon. Our objectives were to: (1) determine the phase shift, i.e. the time lag between maximum transpiration and minimum streamflow, and the strength of the correlation at that time lag; (2) determine the amount of streamflow that is ,missing' during each diel cycle (i.e. the difference between base flow, defined by the daily maxima, and actual flow) and use it to estimate the zone, or area, of vegetation that influences daily streamflow patterns; (3) test and refine a conceptual model of how the coupling between vegetation water use and streamflow changes over the period of summer drought in this basin. We found that vegetation water use in the summer is coupled to streamflow over time scales of 4 to 8 h, and water-use-related fluctuations accounted for 1 to 6% of summer base flow. Direct evaporation from the channel was an order of magnitude less than the diel streamflow decrease. Transpiration within only 0·1 to 0·3% of the basin area accounted for the diel variation in streamflow. As the basin drained further through the summer, the coupling between vegetation and streamflow was diminished and occurred at longer time scales, and the zone of vegetation influence became smaller. This pattern is in accordance with our conceptual model, which attributes the summer decline in the strength of the vegetation,streamflow coupling to the increasing depth of plant-available water in the soil profile. Although this study is preliminary, we believe it is an important first step in describing better the coupling of vegetation water use to streamflow. Copyright © 2002 John Wiley & Sons, Ltd. [source] Soil frost effects on soil water and runoff dynamics along a boreal forest transect: 1.HYDROLOGICAL PROCESSES, Issue 6 2001Field investigations Abstract To determine how soil frost changes flowpaths of runoff water along a hillslope, a transect consisting of four soil profiles directed towards a small stream in a mature forest stand was investigated at Svartberget, near Vindeln in northern Sweden. Soil temperature, unfrozen water content, groundwater level and snow depth were investigated along the transect, which started at the riparian peat, and extended 30 m upslope into mineral soils. The two, more organic-rich profiles closest to the stream had higher water retention and wetter autumn conditions than the sandy mineral soils further upslope. The organic content of the soil influenced the variation in frost along the transect. The first winter (1995,96) had abnormally low snow precipitation, which gave a deep frost down to 40,80 cm, whereas the two following winters had frost depths of 5,20 cm. During winter 1995,96, the two organic profiles close to the stream had a shallower frost depth than the mineral soil profile higher upslope, but a considerably larger amount of frozen water. The fraction of water that did not freeze despite several minus degrees in the soil was 5,7 vol.% in the mineral soil and 10,15 vol.% in the organic soil. From the measurements there were no signs of perched water tables during any of the three snowmelt periods, which would have been strong evidence for changed water flowpaths due to soil frost. When shallow soil layers became saturated during snowmelt, especially in 1997 and 1998, it was because of rising groundwater levels. Several rain on frozen ground events during spring 1996 resulted in little runoff, since most of the rain either froze in the soil or filled up the soil water storage. Copyright © 2001 John Wiley & Sons, Ltd. [source] Simplified estimation of seismically induced settlementsINTERNATIONAL JOURNAL FOR NUMERICAL AND ANALYTICAL METHODS IN GEOMECHANICS, Issue 8 2003E. Vincens Abstract This paper proposes a predictive expression of settlements for a dry sand deposit overlying a bedrock and subjected to a seismic motion. The proposed formula combines geometrical and mechanical properties of the soil profile with classical characteristics of the input motion. One of the main concepts developed herein consists in regarding the input motion and the dynamical response as samples of random processes; another key concept consists in the common densification curve from Sawicki. The model introduces a parameter k identified by means of an extensive set of accelerograms. The main advantage of the proposed method consists in allowing fast comparisons of earthquake induced settlements for different soil and motion characteristics and therefore quantifying the damage power of a time-history input motion. Copyright © 2003 John Wiley & Sons, Ltd. [source] Fire and species range in Mediterranean landscapes: an experimental comparison of seed and seedling performance among Centaurea taxaJOURNAL OF BIOGEOGRAPHY, Issue 1 2002Miquel Riba Aim Fire is a major disturbance event in Mediterranean landscapes. In this paper, we experimentally assess the effects of fire and post-fire conditions on seed germination and establishment of twenty Centaurea taxa to test whether differences among taxa are associated with range size. Methods The taxa (species and subspecies) considered were classified as rare and widespread according to their `area of occupancy' in the Mediterranean coast of Spain and France. In a first experiment, we analyse the effects of heat-shock (particularly, room temperature, 70 and 110 °C) on percentage germination and speed of germination (T50). In a second experiment, we analyse the effects of post-fire conditions (shading and soil type: burned/unburned) on seed germination and establishment ability. Results Temperatures over 120 °C resulted in 100% mortality, while temperatures in the range of those expected to be found in the first centimetres down the soil profile during a wildfire (70,110 °C) had no effect on seed germination. Differences in germination percentage and T50 among taxa were not related to rarity. In the post-fire conditions experiment, decreased radiation (shading) increased percentage germination and T50 in most taxa, while burned soil decreased germination in some of them. The effects of post-fire conditions on seedling growth (number of leaves and leaf size) were also different among taxa, but such differences were not related to rarity. However, rarity was associated with low establishment ability, as rare taxa tended to show smaller seedling size and higher mortality rates under the whole range of conditions tested. Main conclusions The results obtained indicate that fire has a negative effect upon the survival of populations in all the taxa considered, and that rare-common differences in germination and seedling establishment are not directly related to disturbance by fire. As far as interspecific differences in range size are concerned, other factors, either alone or in combination with a low regeneration ability after fire, need to be explored further. [source] Quantification of soil structural changes induced by cereal anchorage failure: Image analysis of thin sectionsJOURNAL OF PLANT NUTRITION AND SOIL SCIENCE, Issue 3 2007Sacha J. Mooney Abstract Cereal anchorage failure, or lodging, is the permanent displacement of a crop from the vertical and results in significant annual yield losses globally. Several factors have been identified as contributors to this phenomenon but the precise mechanisms of failure are still largely unknown because of difficulties in observing these processes as they occur in situ. To identify potential soil management practices to minimize losses associated with cereal root failure, an understanding of the nature of root-soil interactions attributed to lodging is needed. An experiment was conducted that involved field impregnation and subsequent thin sectioning of lodged and unlodged root-soil complexes from contrasting soils, cereal crops, and management practices to elucidate the effects of lodging on soil structure and porous architecture. Using image analysis, size and distribution of pores in soils were quantified at both meso- (100,30 ,m) and microscales (<30 ,m). A significant effect of lodging on porosity was recorded whereby lodging reduced total porosity through compaction created by movement of the stem base, although this was variable among soil types. Pore-size distributions comprehensively supported these trends since alteration in the relative frequency of pores within specific size classes was clearly observed. The effects of lodging were more pronounced at the mesoscale because the data were more susceptible to variations created by natural soil heterogeneity at the microscale. These data suggested that sideways movement of the subterranean stem within the soil is a significant factor which is likely to affect the propensity for a cereal plant to lodge, indicating soil strength in the upper part of the soil profile is crucial. [source] | ||||||||||||||||||||||||||||||||||||||||