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Soil Fauna (soil + fauna)
Selected AbstractsDifferences in litter mass change mite assemblage structure on a deciduous forest floorECOGRAPHY, Issue 6 2006Graham H. R. Osler Few mechanisms that determine the assemblage structure of mites have been identified. Whilst the relative abundance of soil fauna is known to change with humus form, the degree to which the quantity of litter inputs play a part in these changes has not been investigated. We tested the response of oribatid and mesostigmatid mites in litter and soil layers to increasing levels of birch Betula pubescens litter to test whether litter mass could affect the mite assemblage. Six litter treatments (1, 2, 4, 8 and 12×natural litter mass and complete litter removal) were established in November 2004 and the soil and litter communities sampled in October 2005. Species composition of oribatids was distinct for the soil and litter. There was no apparent effect of increasing litter mass on the soil mite assemblage. In the litter layer, the number of oribatids g,1 of litter showed a strong negative relationship with increasing litter mass whilst the number of mesostigmatids g,1 of litter was unresponsive to litter mass. Hence, the relative abundance of these two groups altered with increasing litter mass. The response of the oribatid groups Oppiidae and Poronota followed this negative relationship with litter mass but Phthiracaridae appeared less affected. Consequently, there was a subtle shift in the relative abundance of these groups with increasing litter mass. Our results demonstrate that oribatids as a whole and within groups respond in a predictable manner to increases in litter mass whilst mesostigmatids are unresponsive. Whilst there are undoubtedly biological and physical aspects that vary with litter mass, litter mass itself, is able to explain some patterns in the assemblage of oribatid mites. [source] Bacterial traits, organism mass, and numerical abundance in the detrital soil food web of Dutch agricultural grasslandsECOLOGY LETTERS, Issue 1 2005Christian Mulder Abstract This paper compares responses to environmental stress of the ecophysiological traits of organisms in the detrital soil food webs of grasslands in the Netherlands, using the relationship between average body mass M and numerical abundance N. The microbial biomass and biodiversity of belowground fauna were measured in 110 grasslands on sand, 85 of them farmed under organic, conventional and intensive management. Bacterial cell volume and abundance and electrophoretic DNA bands as well as bacterial activity in the form of either metabolic quotient (qCO2) or microbial quotient (Cmic/Corg) predicted the response of microorganisms to stress. For soil fauna, the logarithm of body mass log(M) was approximately linearly related to the logarithm of numerical abundance log(N) with slope near ,1, and the regression slope and the proportion of predatory species were lower in intensive agroecosystems (more reduced substrates with higher energy content). Linear regression of log(N) on log(M) had slope not far from ,3/4. The approach to monitoring data illustrated in this paper could be useful in assessing land-use quality. [source] Humus forms in two secondary semi-evergreen tropical forestsEUROPEAN JOURNAL OF SOIL SCIENCE, Issue 1 2003G. Loranger Summary The dynamics and function of humus forms in tropical forests are still poorly understood. Humus profiles in two secondary semi-evergreen woodlands in Guadeloupe (French West Indies) were analysed micromorphologically. The humus forms are described under the canopy of five dominant tree species at two sites: under Pisonia subcordata and Bursera simaruba in a secondary forest on a Leptosol (Rendzina), and under Swietenia macrophylla, Tabebuia heterophylla and B. simaruba in a plantation on a calcareous Vertisol. In the secondary forest, two distinct humus forms were observed. A calcareous Amphimull, characterized by an OH horizon comprising the faecal pellets of millipedes, is formed under the canopy of P. subcordata, which produces a litter that is rich in nitrogen. A Dysmull with a thick root mat (OFRh horizon) develops under the canopy of B. simaruba, which produces a litter rich in lignin and phenol that is consumed slowly by the soil fauna. In the plantation on the Vertisol, the activity of the endoanecic earthworm Polypheretima elongata has led to the rapid disappearance of litter and the mixing of organic and mineral material. The humus form is a Eumull and is similar under all three tree species present. [source] Soil animals influence microbial abundance, but not plant,microbial competition for soil organic nitrogenFUNCTIONAL ECOLOGY, Issue 5 2004L. COLE Summary 1In a microcosm experiment we examined the effects of individual species of microarthropods, and variations in microarthropod diversity of up to eight species, on soil microbial properties and the short-term partitioning of a dual-labelled organic nitrogen source (glycine-2- 13C- 15N) between a grassland plant, Agrostis capillaris, and the soil microbial biomass, to determine how soil fauna and their diversity influence plant,microbial competition for organic N. 2We hypothesized that variations in the diversity of animals would influence the partitioning of 15N inputs between plants and the microbial biomass, due to the effect of animal grazing on the microbial biomass, and hence its ability to sequester N. 3Certain individual species of Collembola influenced the microbial community of the soil. Folsomia quadrioculata reduced microbial biomass, whereas Mesaphorura macrochaeta enhanced arbuscular mycorrhizal (AM) colonization of A. capillaris roots. Effects of increasing species richness of microarthropods on microbial biomass and AM colonization were detected, but these effects could be interpreted in relation to the presence or absence of individual species. 4Microbial uptake of added 15N was not affected by the presence of any of the individual species of animal in the monoculture treatments. Similarly, increasing diversity of microarthropods had no detectable effect on microbial 15N. 5Root and shoot uptake of 15N was also largely unaffected by both single species and variations in diversity of microarthropods. However, one collembolan species, Ceratophysella denticulata, reduced root 15N capture when present in monoculture. We did not detect 13C in plant tissue under any experimental treatments, indicating that all N was taken up by plants after mineralization. 6Our data suggest that, while single species and variations in diversity of microarthropods influence microbial abundance in soil, there is no effect on microbial or plant uptake of N. Overall, these data provide little support for the notion that microbial-feeding soil animals are regulators of microbial,plant competition for N. [source] Predicting potential impacts of climate change on the geographical distribution of enchytraeids: a meta-analysis approachGLOBAL CHANGE BIOLOGY, Issue 11 2007MARÍA JESÚS I. BRIONES Abstract The expectation that atmospheric warming will be most pronounced at higher latitudes means that Arctic and montane systems, with predominantly organic soils, will be particularly influenced by climate change. One group of soil fauna, the enchytraeids, is commonly the major soil faunal component in specific biomes, frequently exceeding above-ground fauna in biomass terms. These organisms have a crucial role in carbon turnover in organic rich soils and seem particularly sensitive to temperature changes. In order to predict the impacts of climate change on this important group of soil organisms we reviewed data from 44 published papers using a combination of conventional statistical techniques and meta-analysis. We focused on the effects of abiotic factors on total numbers of enchytraeids (a total of 611 observations) and, more specifically, concentrated on total numbers, vertical distribution and age groupings of the well-studied species Cognettia sphagnetorum (228 observations). The results highlight the importance of climatic factors, together with vegetation and soil type in determining global enchytraeid distribution; in particular, cold and wet environments with mild summers are consistently linked to greater densities of enchytraeids. Based on the upper temperature distribution limits reported in the literature, and identified from our meta-analyses, we also examined the probable future geographical limits of enchytraeid distribution in response to predicted global temperature changes using the HadCM3 model climate output for the period between 2010 and 2100. Based on the existing data we identify that a maximum mean annual temperature threshold of 16 °C could be a critical limit for present distribution of field populations, above which their presence would decline markedly, with certain key species, such as C. sphagnetorum, being totally lost from specific regions. We discuss the potential implications for carbon turnover in these organic soils where these organisms currently dominate and, consequently, their future role as C sink/source in response to climate change. [source] Modelling the effects of loss of soil biodiversity on ecosystem functionGLOBAL CHANGE BIOLOGY, Issue 1 2002H. W. Hunt Abstract There are concerns about whether accelerating worldwide loss of biodiversity will adversely affect ecosystem functioning and services such as forage production. Theoretically, the loss of some species or functional groups might be compensated for by changes in abundance of other species or functional groups such that ecosystem processes are unaffected. A simulation model was constructed for carbon and nitrogen transfers among plants and functional groups of microbes and soil fauna. The model was based on extensive information from shortgrass prairie, and employed stabilizing features such as prey refuges and predator switching in the trophic equations. Model parameters were derived either from the literature or were estimated to achieve a good fit between model predictions and data. The model correctly represented (i) the major effects of elevated atmospheric CO2 and plant species on root and shoot biomass, residue pools, microbial biomass and soil inorganic nitrogen, and (ii) the effects on plant growth of manipulating the composition of the microbial and faunal community. The model was evaluated by comparing predictions to data not used in model development. The 15 functional groups of microbes and soil fauna were deleted one at a time and the model was run to steady state. Only six of the 15 deletions led to as much as a 15% change in abundance of a remaining group, and only two deletions (bacteria and saprophytic fungi) led to extinctions of other groups. Functional groups with greater effect on abundance of other groups were those with greater biomass or greater number of consumers, regardless of trophic position. Of the six deletions affecting the abundance of other groups, only three (bacteria, saprophytic fungi, and root-feeding nematodes) caused as much as 10% changes in indices of ecosystem function (nitrogen mineralization and primary production). While the soil fauna as a whole were important for maintenance of plant production, no single faunal group had a significant effect. These results suggest that ecosystems could sustain the loss of some functional groups with little decline in ecosystem services, because of compensatory changes in the abundance of surviving groups. However, this prediction probably depends on the nature of stabilizing mechanisms in the system, and these mechanisms are not fully understood. [source] The role of soil community biodiversity in insect biodiversityINSECT CONSERVATION AND DIVERSITY, Issue 3 2010ALISON BENNETT Abstract., 1.,This study demonstrates that feedback loops between plants and insects contribute to both plant and insect diversity. Synthesis of several studies reveals that both bottom-up and top-down forces are important for plant and insect communities. 2.,Feedback loops between plants and soil organisms contribute to plant and soil diversity. An analysis of multiple systems reveals that pathogens, mutualists, and a wide variety of soil fauna directly influence, and are influenced by, plant diversity. 3.,The connection of plant,insect and soil,plant feedback loops leads to the maintenance of all three groups, and the maintenance of these feedback loops crucially affects insect diversity. Examples of the influence of soil community diversity on insect diversity, and the influence of insect diversity on soil community diversity, as well as feedbacks through all three trophic levels are provided. 4.,Finally, means of conserving and restoring soil communities to influence the conservation and restoration of insect communities are discussed. [source] Pharmaceutical antibiotic compounds in soils , a reviewJOURNAL OF PLANT NUTRITION AND SOIL SCIENCE, Issue 2 2003Sören Thiele-Bruhn Antibiotics are highly effective, bioactive substances. As a result of their consumption, excretion, and persistence, they are disseminated mostly via excrements and enter the soils and other environmental compartments. Resulting residual concentrations in soils range from a few ,g upto g kg,1 and correspond to those found for pesticides. Numerous antibiotic molecules comprise of a non-polar core combined with polar functional moieties. Many antibiotics are amphiphilic or amphoteric and ionize. However, physicochemical properties vary widely among compounds from the various structural classes. Existing analytical methods for environmental samples often combine an extraction with acidic buffered solvents and the use of LC-MS for determination. In soils, adsorption of antibiotics to the organic and mineral exchange sites is mostly due to charge transfer and ion interactions and not to hydrophobic partitioning. Sorption is strongly influenced by the pH of the medium and governs the mobility and transport of the antibiotics. In particular for the strongly adsorbed antibiotics, fast leaching through soils by macropore or preferential transport facilitated by dissolved soil colloids seems to be the major transport process. Antibiotics of numerous classes are photodegraded. However, on soil surfaces this process if of minor influence. Compared to this, biotransformation yields a more effective degradation and inactivation of antibiotics. However, some metabolites still comprise of an antibiotic potency. Degradation of antibiotics is hampered by fixation to the soil matrix; persisting antibiotics were already determined in soils. Effects on soil organisms are very diverse, although all antibiotics are highly bioactive. The absence of effects might in parts be due to a lack of suitable test methods. However, dose and persistence time related effects especially on soil microorganisms are often observed that might cause shifts of the microbial community. Significant effects on soil fauna were only determined for anthelmintics. Due to the antibiotic effect, resistance in soil microorganisms can be provoked by antibiotics. Additionally, the administration of antibiotics mostly causes the formation of resistant microorganisms within the treated body. Hence, resistant microorganisms reach directly the soils with contaminated excrements. When pathogens are resistant or acquire resistance from commensal microorganisms via gene transfer, humans and animals are endangered to suffer from infections that cannot be treated with pharmacotherapy. The uptake into plants even of mobile antibiotics is small. However, effects on plant growth were determined for some species and antibiotics. Pharmazeutische Antibiotika in Böden , ein Überblick Antibiotika sind hochgradig wirksame, bioaktive Substanzen. Infolge ihrer Anwendung, Ausscheidung und Persistenz werden sie meist über die Exkremente in Böden und andere Umweltkompartimente eingetragen. Die resultierenden Rückstandskonzentrationen in Böden im Bereich von wenigen ,g bis zu g kg,1 entsprechen in etwa denen von Pflanzenschutzmitteln. Die Molekülstruktur von Antibiotika besteht häufig aus einem unpolaren Kern und polaren Randgruppen. Viele Antibiotika sind amphiphil oder amphoter und bilden Ionen, jedoch weisen die zahlreichen Antibiotika unterschiedlicher Strukturklassen stark divergierende physikochemische Eigenschaften auf. In den vorliegenden Nachweis"methoden für Umweltproben werden häufig sauer gepufferte Lösungsmittel zur Extraktion und eine Bestimmung mittels LC-MS kombiniert. Die Adsorption der Antibiotika an den organischen als auch an den mineralischen Bodenaustauschern erfolgt zumeist durch Ladungs- und Ionenwechselwirkungen und weniger durch hydrophobe Bindungen. Das Verteilungsverhalten hängt dabei entscheidend vom pH-Wert des Mediums ab und beeinflusst die Mobilität und Verlagerung der Antibiotika. Bei vielen, insbesondere stark adsorbierten Antibiotika sind v.,a. schnelle Fließvorgänge wie durch präferenziellen und Makroporenfluss sowie der Cotransport mit gelösten Bodenkolloiden von besonderer Bedeutung. Antibiotika vieler Strukturklassen können durch Licht abgebaut werden. Dieser Abbaupfad spielt auf Bodenoberflächen jedoch nur eine untergeordnete Rolle. Hingegen kommt es insbesondere durch biologische Transformationsprozesse zu einer intensiven Degradation und Inaktivierung der Antibiotika. Verschiedene Metaboliten weisen jedoch ebenfalls ein antibiotisches Potential auf. Der Abbau der Antibiotika wird durch die Festlegung in Böden gehemmt; dementsprechend wurde eine Persistenz verschiedener Antibiotika nachgewiesen. Trotz der starken bioaktiven Wirkung aller Antibiotika sind die festgestellten Effekte auf Bodenorganismen sehr unterschiedlich. Dies liegt nicht zuletzt an einem Mangel an geeigneten Testmethoden. In der Regel sind jedoch von Dosis und Wirkungsdauer abhängige Effekte insbesondere auf Mikroorganismen festzustellen, die zu Veränderungen der Mikroorganismenpopulation führen können. Lediglich durch Anthelmintika wurden deutliche Wirkungen auf Vertreter der Bodenfauna hervorgerufen. Infolge der antibiotischen Wirkung der Pharmazeutika kann eine Resistenzbildung bei Bodenorganismen ausgelöst werden. Zudem hat die Medikation von Antibiotika die Bildung resistenter Mikroorganismen bereits im behandelten Organismus zur Folge. Durch deren anschließende Ausscheidung gelangen resistente Keime auch direkt in die Böden. Handelt es sich um resistente Pathogene oder kommt es zur Übertragung der Resistenzgene zwischen kommensalen und pathogenen Mikroorganismen, so besteht das erhebliche Risiko einer nicht therapierbaren Infektion von Mensch und Tier. Die Aufnahme selbst mobiler Antibiotika in die Pflanzen ist sehr gering. Dennoch wurden bei einigen Pflanzenarten Wirkungen von Antibiotika auf das Wachstum nachgewiesen. [source] Mounding as a Technique for Restoration of Prairie on a Capped Landfill in the Puget Sound LowlandsRESTORATION ECOLOGY, Issue 2 2002Kern Ewing Abstract Closed landfills create large open spaces that are often proposed as sites for restored or created ecosystems. Grasslands are probably prescribed most often because of the presumption that grass root systems will not breach the landfill cap. Capped landfills have a number of soil degradation problems, including compaction, decreased permeability, lack of organic material, diminished soil fauna, inappropriate texture, and lack of structure. In this study in the Puget Sound lowlands, Washington, U.S.A., mounding (low sandy-loam mounds, about 20 cm high and 2 m in diameter), addition of fertilizer, and mulching with yard-waste compost were applied to landfill sites as treatments in a factorial-design experiment. Prairie plants (1,344 individuals, 7 species) were planted into 4-m2 plots (n = 48), and plant growth and survival and the increase in weed biomass were monitored for 3 years. Mulching had no effect on plant survival or growth. Fertilization had a negative effect on Lupinus lepidus, a nitrogen-fixing species. Mounding had a positive effect on growth and survival of Eriophyllum lanatum, Festuca idahoensis, and Aster curtus. Potentilla pacifica was indifferent to mounding, and Carex inops responded negatively. Mounds should probably be used as one element of a complex of habitats on restored landfills. [source] The role of microarthropods in terrestrial decomposition: a meta-analysis of 40 years of litterbag studiesBIOLOGICAL REVIEWS, Issue 3 2009Christian Kampichler ABSTRACT Litterbags have been utilized in soil ecology for about 50 years. They are useful because they confine organic material and thus enable the study of decomposition dynamics (mass loss and/or nutrient loss through time, colonization by soil biota) in situ, i.e. under field conditions. Researchers can easily restrict or permit access to certain size classes of soil fauna to determine their contribution to litter mass loss by choosing adequate mesh size or applying specific biocides. In particular, the mesofauna has received much attention since it comprises two very abundant and diverse microarthropod groups, the Collembola (springtails) and Acari (mites). We comprehensively searched the literature from the mid-1960s to the end of 2005 for reports on litterbag experiments investigating the role of microarthropods in terrestrial decomposition. Thirty papers reporting 101 experiments satisfied our selection criteria and were included in the database. Our meta-analysis revealed that microarthropods have a moderate but significant effect on mass loss. We discuss in detail the interactions of the microarthropod effect with study characteristics such as experimental design (e.g. number of bags, duration of experiment), type of exposed organic matter, climatic zone and land use of the study site. No publication bias was detected; however, we noticed a significant decrease in the microarthropod effect with publication year, indicating that, in the first decades of litterbag use, soil zoologists may have studied "promising" sites with a higher a priori probability of positive microarthropod effects on litter mass loss. A general weakness is that the treatments differ not only with respect to the presence or absence of microarthropods, but also with regard to mesh size (small to exclude microarthropods, wide to permit their access) or presence (to exclude microarthropods) and absence (to permit their access) of an insecticide. Consequently, the difference between the decomposition rates in the treatments is not a pure microarthropod effect but will be influenced by the additive effects of mesh size and insecticide. The relative contribution of the "true" microarthropod effect remains unknown without additional treatments controlling for the differential mesh size/insecticide effect. A meta-analysis including only those studies using different mesh size and for which the data were corrected by subtracting an estimated mesh size effect based on data from the literature yielded a significantly negative microarthropod effect on litter decomposition. These results cast doubt on the widely accepted hypothesis that microarthropods generally exert a positive effect on litter mass loss. We conclude that after 40 years of litterbag studies our knowledge on the role of microarthropods in litter mass loss remains limited and that the inclusion of a third treatment in future studies is a promising way to retain litterbags as a meaningful tool of soil biological studies. [source] | |||||||||||||