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Size Frequency Distributions (size + frequency_distribution)
Selected AbstractsChallenging Wallacean and Linnean shortfalls: knowledge gradients and conservation planning in a biodiversity hotspotDIVERSITY AND DISTRIBUTIONS, Issue 5 2006Luis Mauricio Bini ABSTRACT Knowledge about biodiversity remains inadequate because most species living on Earth were still not formally described (the Linnean shortfall) and because geographical distributions of most species are poorly understood and usually contain many gaps (the Wallacean shortfall). In this paper, we developed models to infer the size and placement of geographical ranges of hypothetical non-described species, based on the range size frequency distribution of anurans recently described in the Cerrado Biome, on the level of knowledge (number of inventories) and on surrogates for habitat suitability. The rationale for these models is as follow: (1) the range size frequency distribution of these species should be similar to the range-restricted species, which have been most recently described in the Cerrado Biome; (2) the probability of new discoveries will increase in areas with low biodiversity knowledge, mainly in suitable areas, and (3) assuming range continuity, new species should occupy adjacent cells only if the level of knowledge is low enough to allow the existence of undiscovered species. We ran a model based on the number of inventories only, and two models combining effects of number of inventories and two different estimates of habitat suitability, for a total of 100 replicates each. Finally, we performed a complementary analysis using simulated annealing to solve the set-covering problem for each simulation (i.e. finding the smallest number of cells so that all species are represented at least once), using extents of occurrence of 160 species (131 real anuran species plus 29 new simulated species). The revised reserve system that included information about unknown or poorly sampled taxa significantly shifted northwards, when compared to a system based on currently known species. This main result can be explained by the paucity of biodiversity data in this part of the biome, associated with its relatively high habitat suitability. As a precautionary measure, weighted by the inferred distribution data, the prioritization of a system of reserves in the north part of the biome appears to be defensible. [source] Patterns and causes of species richness: a general simulation model for macroecologyECOLOGY LETTERS, Issue 9 2009Nicholas J. Gotelli Abstract Understanding the causes of spatial variation in species richness is a major research focus of biogeography and macroecology. Gridded environmental data and species richness maps have been used in increasingly sophisticated curve-fitting analyses, but these methods have not brought us much closer to a mechanistic understanding of the patterns. During the past two decades, macroecologists have successfully addressed technical problems posed by spatial autocorrelation, intercorrelation of predictor variables and non-linearity. However, curve-fitting approaches are problematic because most theoretical models in macroecology do not make quantitative predictions, and they do not incorporate interactions among multiple forces. As an alternative, we propose a mechanistic modelling approach. We describe computer simulation models of the stochastic origin, spread, and extinction of species' geographical ranges in an environmentally heterogeneous, gridded domain and describe progress to date regarding their implementation. The output from such a general simulation model (GSM) would, at a minimum, consist of the simulated distribution of species ranges on a map, yielding the predicted number of species in each grid cell of the domain. In contrast to curve-fitting analysis, simulation modelling explicitly incorporates the processes believed to be affecting the geographical ranges of species and generates a number of quantitative predictions that can be compared to empirical patterns. We describe three of the ,control knobs' for a GSM that specify simple rules for dispersal, evolutionary origins and environmental gradients. Binary combinations of different knob settings correspond to eight distinct simulation models, five of which are already represented in the literature of macroecology. The output from such a GSM will include the predicted species richness per grid cell, the range size frequency distribution, the simulated phylogeny and simulated geographical ranges of the component species, all of which can be compared to empirical patterns. Challenges to the development of the GSM include the measurement of goodness of fit (GOF) between observed data and model predictions, as well as the estimation, optimization and interpretation of the model parameters. The simulation approach offers new insights into the origin and maintenance of species richness patterns, and may provide a common framework for investigating the effects of contemporary climate, evolutionary history and geometric constraints on global biodiversity gradients. With further development, the GSM has the potential to provide a conceptual bridge between macroecology and historical biogeography. [source] Sural Nerve Pathology In Asymptomatic Minimally Neuropathic Diabetic PatientsJOURNAL OF THE PERIPHERAL NERVOUS SYSTEM, Issue 3 2000Ra Malik 12 diabetic patients aged 47.5 ± 9.4 yr., duration of diabetes (14.6 ± 10.3 yr.) and 15 control subjects were studied. In diabetic patients neuropathy symptom score =0, neuropathy deficit score = 4.5 + 0.7/30, vibration = 12.0 + 1.8 V, thermal perception (2.0 + 0.8°C), heart rate variation during deep breathing (17.8 + 2.3), 30:15 ratio (1.31 + 0.07) was normal. Baseline (n=12) and repeat neurophysiology (n=10) performed 8.7 + 0.6 years after sural nerve biopsy demonstrated normal values at baseline, with progression of neuropathy (peroneal motor nerve conduction velocity (ms,1) (42.3 + 2.9 v 39.4 +2.0), sural nerve conduction velocity (45.4 + 3.7 v 43.6 + 1.7). Myelinated fibre density, fibre and axonal area and g-ratio were not significantly reduced. Teased fibre studies showed paranodal abnormalities (p < 0.001), segmental demyelination (P < 0.01) with remyelination (P < 0.01) without axonal degeneration. Unassociated Schwann cell profile density (p < 0.04) and axon density (P < 0.001) were increased and axon diameter was decreased (P < 0.007) with a shift of the size frequency distribution to the left (skewness- 0.89 v 0.64, P < 0.03) suggestive of unmyelinated axonal atrophy/regeneration. Endoneurial capillary basement membrane thickening (P < 0.006), endothelial cell hyperplasia (P < 0.004) and luminal narrowing (P < 0.007) occurred. Current measures of neuropathy are too insensitive to detect significant nerve fibre pathology. The presence of microangiopathy provides support for a microvascular basis of diabetic neuropathy. [source] Is the productivity of vegetation plots higher or lower when there are more species?OIKOS, Issue 2 2003Variable predictions from interaction of the, competitive dominance effect' on the habitat templet, sampling effect' Using a habitat templet model, we predict that the productivity (total biomass) of plots within a plant community may be positively, negatively or not at all related to variation in the number of species per plot, depending on successional stage (time since major disturbance) and habitat carrying capacity (reflecting the total resource supplying power of the habitat). For plots of a given size, a positive relationship between productivity and species richness is predicted in recently disturbed habitats because local neighbourhoods here will have been assembled largely stochastically, usually from a pool of available species with a right-skewed size frequency distribution. Hence, in the earliest stages of succession, plots will have relatively high total biomass only if they contain at least some of the relatively uncommon larger species which will, in turn, be more likely in those neighbourhoods that contain more species (the sampling effect). Among these will also be some of the more common smaller species; hence, these high biomass, species-rich plots should have relatively low species evenness, in contrast to what is predicted under effects involving species complementarity. In late succession, the plots with high total biomass will still be those that contain relatively large species but these plots will now contain relatively few species owing to increased competitive exclusion over time (the competitive dominance effect). In intermediate stages of succession, no relationship between plot productivity and species richness is predicted because the opposing sampling and competitive dominance effects cancel each other out. We predict that the intensity of both the sampling and competitive dominance effects on the productivity/species richness relationship will decrease with decreasing habitat carrying capacity (e.g. decreasing substrate fertility) owing to the inherently lower variance in between-plot productivity that is predicted for more resource-impoverished habitats. [source] Impact of the timing of stocking on growth and allometric index in aquaculture-based fisheriesFISHERIES MANAGEMENT & ECOLOGY, Issue 2 2004A. L. Ibáńez Abstract The impact of tilapia stocking on fisheries production in Lake Metztitlán was determined through progression analysis of modes obtained from (Gaussian) kernel density estimators (KDEs) of size frequency distributions of juvenile tilapia stocked after a period of total desiccation. The relationship between the allometric index of four cohorts and water temperature and variation in the volume of the basin was analysed. The use of KDEs was found to be a useful technique for the recognition and progression analysis of modes. The reasons for the low yields from the tilapia fishery of Lake Metztitlán are poor growth rate, low water temperature, which is manifest in low allometric indices, and the use of small mesh size nets. Yields can be sustained by improving fishery management; otherwise it is necessary to continue stocking. [source] Californian mixed-conifer forests under unmanaged fire regimes in the Sierra San Pedro Mártir, Baja California, MexicoJOURNAL OF BIOGEOGRAPHY, Issue 1 2000R. A. Minnich Abstract Aim,This study appraises historical fire regimes for Californian mixed-conifer forests of the Sierra San Pedro Mártir (SSPM). The SSPM represents the last remaining mixed-conifer forest along the Pacific coast still subject to uncontrolled, periodic ground fire. Location,The SSPM is a north,south trending fault bound range, centred on 31°N latitude, 100 km SE of Ensenada, Baja California. Methods,We surveyed forests for composition, population structure, and historical dynamics both spatially and temporally over the past 65 years using repeat aerial photographs and ground sampling. Fire perimeter history was reconstructed based on time-series aerial photographs dating from 1942 to 1991 and interpretable back to 1925. A total of 256 1-ha sites randomly selected from aerial photographs were examined along a chronosequence for density and cover of canopy trees, density of snags and downed logs, and cover of non-conifer trees and shrubs. Twenty-four stands were sampled on-the-ground by a point-centred quarter method which yielded data on tree density, basal area, frequency, importance value, and shrub and herb cover. Results,Forests experience moderately intense understory fires that range in size to 6400 ha, as well as numerous smaller, low intensity burns with low cumulative spatial extent. SSPM forests average 25,45% cover and 65,145 trees per ha. Sapling densities were two to three times that of overstory trees. Size-age distributions of trees , 4 cm dbh indicate multi-age stands with steady-state dynamics. Stands are similar to Californian mixed conifer forests prior to the imposition of fire suppression policy. Livestock grazing does not appear to be suppressing conifer regeneration. Main conclusions,Our spatially-based reconstruction shows the open forest structure in SSPM to be a product of infrequent, intense surface fires with fire rotation periods of 52 years, rather than frequent, low intensity fires at intervals of 4,20 years proposed from California fire-scar dendrochronology (FSD) studies. Ground fires in SSPM were intense enough to kill pole-size trees and a significant number of overstory trees. We attribute long fire intervals to the gradual build-up of subcontinuous shrub cover, conifer recruitment and litter accumulation. Differences from photo interpretation and FSD estimates are due to assumptions made with respect to site-based (point) sampling of fire, and nonfractal fire intensities along fire size frequency distributions. Fire return intervals determined by FSD give undue importance to local burns which collectively use up little fuel, cover little area, and have little demographic impact on forests. [source] Differential rates of morphological divergence in birdsJOURNAL OF EVOLUTIONARY BIOLOGY, Issue 5 2004F. Bokma Abstract There are more small-bodied bird species than there are large-bodied, even on a logarithmic scale. In birds this pattern, which is also found in other higher taxa, appears not to be due to neutral evolution. It has often been suggested that the skew of body size frequency distributions is the result of a relationship between body size and the net rate of speciation, but phylogenetic analyses so far have rejected the hypothesis that small-bodied species are subject to higher net rates of speciation. On the contrary, we show that there exists a relationship between body size and its own evolutionary variability: avian families of small body size show less interspecific variation in body size than large-bodied families of similar age and species richness. [source] Abundance, Tidal Movement, Population Structure and Burrowing Rate of Emerita analoga (Anomura, Hippidae) at a Dissipative and a Reflective Sandy Beach in South Central ChileMARINE ECOLOGY, Issue 2 2000Eduardo Jaramillo Abstract. To evaluate the effects of beach morphodynamics upon the abundance, tidal movement, population structure and burrowing rate of the crab Emerita analoga (Stimpson) (Anomura, Hippidae) we sampled two beaches in south central Chile (ca. 42° S), Mar Brava and Ahui with dissipative and reflective characteristics, respectively. The swash zone at the dissipative beach was 5,,,6 times wider than that of the reflective beach. A at the dissipative beach, upwash speeds were higher and the number of effluent line crossings were lower by more than an order of magnitude. To examine the tidal movement of E. analoga, we collected crabs from 5 to 6 tidal levels of each beach every 2 h across 12 h of the tidal cycle. The intertidal distribution of crabs differed between beaches; i. e., at the dissipative beach they were primarily located at the swash zone, while at the reflective beach they were mostly located at the low tide level and shallow subtidal. The change in position of crabs was pronounced across the tidal cycle at the dissipative beach (Mar Brava), with most of the animals remaining in the active swash zone. Body size data were used to construct size frequency distributions for each population. Crabs from the dissipative beach reached larger sizes than those at the reflective beach. Sediments were coarser at the latter versus the former beach. Crabs burrowed at similar rates in the sand from both beaches, a result which supports the idea that E. analoga is a "sediment generalist" capable of burrowing successfully in a wide range of sediment types. This characteristic is likely a key to the broad success of this species on the full range of beach morphodynamic types along the coasts of South and North America. [source] Hidden patterns of colony size variation in seabirds: a logarithmic point of viewOIKOS, Issue 12 2008Roger Jovani Explaining the huge variability present in bird colony sizes within and between species is intimately related to the understanding of the proximate and ultimate reasons for bird coloniality. However, natural patterns of colony size frequency distributions (CSFDs) remain poorly known. It is widely believed that colonial birds have similar long-tailed (highly right-skewed) CSFDs and that species mainly differ in their maximum colony sizes (in the length of the ,tail' of their CSFDs). We used data from the Seabird 2000 project (20 species; 19 978 colonies; 3 779 919 nests), the largest and most detailed dataset currently available, to analyse the CSFDs of seabird breeding in Britain and Ireland. Log-transformations of colony sizes revealed that the often reported long-tailed CSFDs in common histograms were hiding contrasting patterns, mainly log-normal but also power law CSFDs. The different statistical characteristics of CSFDs did not co-occur at random within species and were in fact highly correlated (e.g. a large geometric mean correlated with a large coefficient of variation). A PCA with these characteristics revealed a smoothed transition between species' CSFD. Therefore, (a) a logarithmic analysis will allow different aspects of what is currently only referred to as ,colony size variation' to be quantified; (b) we challenge the current idea that all species show similar long-tailed CSFDs; (c) we offer a new (unified) view of colony size variation and discuss how these new patterns confirm, challenge and may advance theoretical and applied research into bird coloniality. [source] Primary productivity can affect mammalian body size frequency distributionsOIKOS, Issue 2 2001Birgitta Aava Frequency distributions of mammal body sizes in large-scale assemblages have often been found to show a positive skew. In an attempt to explain this pattern, a model has been put forward which incorporates energetic constraints on fitness and thereby predicts optimal body sizes corresponding to the mode of the distribution. A key assumption of the model is that energy is unlimited. However, if energy is limited, the input of energy into a herbivorous mammal community should influence the shape of the frequency distribution. Thus, I propose that increases in primary productivity will decrease the variation of body size and increase the mean body size in a distribution. So, in low-productivity environments we should see a predominance of small-sized species, but with a great variation of body sizes due to limitations of resources (energy). I tested this hypothesis using the herbivorous mammal fauna (rodents, bats and marsupials) in seven biomes of Australia. Because herbivorous marsupials generally are fairly large-bodied while rodents and bats are small-sized and because marsupials also have a different mode of reproduction from placental mammals, the hypothesis was also tested on placental mammals and marsupials separately. There was no clear mode for the entire assemblage in any biome, but as primary productivity increased, the variation of body masses decreased and the mean body mass of the distribution increased. Body mass distributions of both placental mammals and marsupials displayed clear modes. Placental mammals also showed an increase in mean body mass. The variation in body mass of marsupials was highest for the intermediately productive biomes. Primary productivity does seem to have some effect on mammalian body mass in this case, but the results here need to be complemented with studies of other assemblages before any general conclusions can be drawn. It is also important to distinguish which taxa are affected in a heterogeneous assemblage like the Australian herbivorous mammal fauna. [source] Body size variation in insects: a macroecological perspectiveBIOLOGICAL REVIEWS, Issue 1 2010Steven L. Chown Body size is a key feature of organisms and varies continuously because of the effects of natural selection on the size-dependency of resource acquisition and mortality rates. This review provides a critical and synthetic overview of body size variation in insects from a predominantly macroecological (large-scale temporal and spatial) perspective. Because of the importance of understanding the proximate determinants of adult size, it commences with a brief summary of the physiological mechanisms underlying adult body size and its variation, based mostly on findings for the model species Drosophila melanogaster and Manduca sexta. Variation in nutrition and temperature have variable effects on critical weight, the interval to cessation of growth (or terminal growth period) and growth rates, so influencing final adult size. Ontogenetic and phylogenetic variation in size, compensatory growth, scaling at the intra- and interspecific levels, sexual size dimorphism, and body size optimisation are then reviewed in light of their influences on individual and species body size frequency distributions. Explicit attention is given to evolutionary trends, including gigantism, Cope's rule and the rates at which size change has taken place, and to temporal ecological trends such as variation in size with succession and size-selectivity during the invasion process. Large-scale spatial variation in size at the intraspecific, interspecific and assemblage levels is considered, with special attention being given to the mechanisms proposed to underlie clinal variation in adult body size. Finally, areas particularly in need of additional research are identified. [source] Occupancy frequency distributions: patterns, artefacts and mechanismsBIOLOGICAL REVIEWS, Issue 3 2002MELODIE A. McGEOCH ABSTRACT Numerous hypotheses have been proposed to explain the shape of occupancy frequency distributions (distributions of the numbers of species occupying different numbers of areas). Artefactual effects include sampling characteristics, whereas biological mechanisms include organismal, niche-based and metapopulation models. To date, there has been little testing of these models. In addition, although empirically derived occupancy distributions encompass an array of taxa and spatial scales, comparisons between them are often not possible because of differences in sampling protocol and method of construction. In this paper, the effects of sampling protocol (grain, sample number, extent, sampling coverage and intensity) on the shape of occupancy distributions are examined, and approaches for minimising artefactual effects recommended. Evidence for proposed biological determinants of the shape of occupancy distributions is then examined. Good support exists for some mechanisms (habitat and environmental heterogeneity), little for others (dispersal ability), while some hypotheses remain untested (landscape productivity, position in geographic range, range size frequency distributions), or are unlikely to be useful explanations for the shape of occupancy distributions (species specificity and adaptation to habitat, extinction,colonization dynamics). The presence of a core (class containing species with the highest occupancy) mode in occupancy distributions is most likely to be associated with larger sample units, and small homogenous sampling areas positioned well within and towards the range centers of a sufficient proportion of the species in the assemblage. Satellite (class with species with the lowest occupancy) modes are associated with sampling large, heterogeneous areas that incorporate a large proportion of the assemblage range. However, satellite modes commonly also occur in the presence of a core mode, and rare species effects are likely to contribute to the presence of a satellite mode at most sampling scales. In most proposed hypotheses, spatial scale is an important determinant of the shape of the observed occupancy distribution. Because the attributes of the mechanisms associated with these hypotheses change with spatial scale, their predictions for the shape of occupancy distributions also change. To understand occupancy distributions and the mechanisms underlying them, a synthesis of pattern documentation and model testing across scales is thus needed. The development of null models, comparisons of occupancy distributions across spatial scales and taxa, documentation of the movement of individual species between occupancy classes with changes in spatial scale, as well as further testing of biological mechanisms are all necessary for an improved understanding of the distribution of species and assemblages within their geographic ranges. [source] | ||||||||||