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Selected AbstractsProfilin-1 overexpression restores adherens junctions in MDA-MB-231 breast cancer cells in R-cadherin-dependent mannerCYTOSKELETON, Issue 12 2009Li Zou Abstract Profilin-1 (Pfn1), a ubiquitously expressed actin-binding protein, is downregulated in several different types of adenocarcinoma and elicits tumor-suppressive effect on breast cancer cell lines. MDA-MB-231 (MDA-231), a breast cancer cell line that displays all the characteristics of post-epithelial-to-mesenchymal transition and does not form cell,cell adhesion, can be reverted to an epithelioid phenotype by Pfn1 overexpression. This morphological transition is caused by restoration of adherens junctions (AJ) requiring Pfn1's interaction with actin. Pfn1 overexpression increases the expression level of R-cadherin (a type of cadherin that is endogenously expressed in the parental cell line) and restores AJ in MDA-231 cells in R-cadherin-dependent manner. These findings highlight important role of Pfn1 in the regulation of epithelial cell,cell adhesion. Cell Motil. Cytoskeleton 2009. © 2009 Wiley-Liss, Inc. [source] Genome-wide P -element screen for Drosophila synaptogenesis mutantsDEVELOPMENTAL NEUROBIOLOGY, Issue 4 2006Faith L.W. Liebl Abstract A molecular understanding of synaptogenesis is a critical step toward the goal of understanding how brains "wire themselves up," and then "rewire" during development and experience. Recent genomic and molecular advances have made it possible to study synaptogenesis on a genomic scale. Here, we describe the results of a screen for genes involved in formation and development of the glutamatergic Drosophila neuromuscular junction (NMJ). We screened 2185 P -element transposon mutants representing insertions in ,16% of the entire Drosophila genome. We first identified recessive lethal mutants, based on the hypothesis that mutations causing severe disruptions in synaptogenesis are likely to be lethal. Two hundred twenty (10%) of all insertions were homozygous lethal. Two hundred five (93%) of these lethal mutants developed at least through late embryogenesis and formed neuromusculature. We examined embryonic/larval NMJs in 202 of these homozygous mutants using immunocytochemistry and confocal microscopy. We identified and classified 88 mutants with altered NMJ morphology. Insertion loci in these mutants encode several different types of proteins, including ATP- and GTPases, cytoskeletal regulators, cell adhesion molecules, kinases, phosphatases, RNA regulators, regulators of protein formation, transcription factors, and transporters. Thirteen percent of insertions are in genes that encode proteins of novel or unknown function. Complementation tests and RT-PCR assays suggest that approximately 51% of the insertion lines carry background mutations. Our results reveal that synaptogenesis requires the coordinated action of many different types of proteins,perhaps as much as 44% of the entire genome,and that transposon mutageneses carry important caveats that must be respected when interpreting results generated using this method. © 2006 Wiley Periodicals, Inc. J Neurobiol, 2006 [source] Detection of unexpected events during spatial navigation in humans: bottom-up attentional system and neural mechanismsEUROPEAN JOURNAL OF NEUROSCIENCE, Issue 4 2008Giuseppe Iaria Abstract Navigation is a complex cognitive ability requiring the processing and integration of several different types of information extracted from the environment. While navigating, however, an unexpected event may suddenly occur, which individuals are required to detect promptly in order to apply an appropriate behavioural response. The alerting mechanism that is integral to the detection of unexpected events is referred to as the bottom-up attentional system. Using event-related functional magnetic resonance imaging, we investigated the neural basis of bottom-up detection of unexpected events while individuals moved within a virtual environment. We identified activation within a right fronto-temporo-parietal network in response to unexpected events while navigating in this virtual environment. Furthermore, when an unexpected event requires an adjusted behavioural response, a region of the right ventrolateral pre-frontal cortex (areas 45 and 47/12) is selectively activated. Our data replicate earlier findings on the neural mechanisms underlying visual attention and extend these findings to the more complex real-life ability of spatial navigation, thereby suggesting that these neural mechanisms subserve the bottom-up attentional systems that are crucial for effective locomotion in real surroundings. [source] Description of fatigue damage in carbon black filled natural rubberFATIGUE & FRACTURE OF ENGINEERING MATERIALS AND STRUCTURES, Issue 12 2008J.-B. LE CAM ABSTRACT The present paper describes macroscopic fatigue damage in carbon black-filled natural rubber (CB-NR) under uniaxial loading conditions. Uniaxial tension-compression, fully relaxing uniaxial tension and non-relaxing uniaxial tension loading conditions were applied until sample failure. Results, summarized in a Haigh-like diagram, show that only one type of fatigue damage is observed for uniaxial tension-compression and fully relaxing uniaxial tension loading conditions, and that several different types of fatigue damage take place in non-relaxing uniaxial tension loading conditions. The different damage types observed under non-relaxing uniaxial tension, loading conditions are closely related to the improvement of rubber fatigue life. Therefore, as fatigue life improvement is classically supposed to be due to strain-induced crystallization (SIC), a similar conclusion can be drawn for the occurrence of different types of fatigue damage. [source] Examination of fatigue crack driving force parameterFATIGUE & FRACTURE OF ENGINEERING MATERIALS AND STRUCTURES, Issue 9 2008Y. XIONG ABSTRACT Most of the previous parameters that utilized as a crack driving force were established in modifying the parameter Kop in Elber's effective SIF range ,Keff(=Kmax,Kop). However, the parameters that replaced the traditional parameter Kop were based on different measurements or theoretical calculations, so it is difficult to distinguish their differences. This paper focuses on the physical meaning of compliance changes caused by plastic deformation at the crack tip; the tests were carried out under different amplitude loading for structural steel. Based on these test results, differences of several parameter ,Keff in literature are analysed and an improved two-parameter driving force ,Kdrive(=(Kmax)n(,K,)1-n) has been proposed. Experimental data for several different types of materials taken from literature were used in the analyses. Presented results indicate that the ,Kdrive parameter was equally effective or better than ,K(=Kmax,Kmin), ,Keff(=Kmax,Kop) and ,K*(= (Kmax),(,K+)1,,) in correlating and predicting the R -ratio effects on fatigue crack growth rate. [source] Novel stability criteria for bidirectional associative memory neural networks with time delaysINTERNATIONAL JOURNAL OF CIRCUIT THEORY AND APPLICATIONS, Issue 5 2002Xiaofeng Liao Abstract In this paper, the bidirectional associative memory (BAM) neural network with axonal signal transmission delay is considered. This model is also referred to as a delayed dynamic BAM model. By combining a number of different Lyapunov functionals with the Razumikhin technique, some sufficient conditions for the existence of a unique equilibrium and global asymptotic stability of the network are derived. These results are fairly general and can be easily verified. Besides, the approach for the analysis allows one to consider several different types of activation functions, including piecewise linear sigmoids with bounded activations as well as C1 -smooth sigmoids. It is believed that these results are significant and convenient in the design and applications of BAM neural networks. Copyright © 2002 John Wiley & Sons, Ltd. [source] Mirk/Dyrk1B in cancerJOURNAL OF CELLULAR BIOCHEMISTRY, Issue 2 2007Eileen Friedman Abstract Mirk/Dyrk1B is a member of a conserved family of serine/threonine kinases which are activated by intramolecular tyrosine phosphorylation, and which mediate differentiation in different tissues,Mirk in skeletal muscle, Dyrk1A in the brain, etc. One role of Mirk in skeletal muscle differentiation is to block cycling myoblasts in the G0 quiescent state by modification of cell cycle regulators, while another role of Mirk is to limit apoptosis in fusing myoblasts. Amplification of the Mirk gene, upregulation of Mirk expression and/or constitutive activation of this kinase have been observed in several different types of cancer. If coupled with a stress condition such as serum starvation which induces a quiescent state, depletion of Mirk by RNA interference using either synthetic duplex RNAi's or pSilencer-encoded RNAi's have decreased colony formation of different cancer cell lines and enhanced apoptosis induced by chemotherapeutic drugs. Mirk is activated by phosphorylation by the stress-activated SAPK kinases MKK3 and MKK6. Our working hypothesis is that Mirk is activated by this pathway in response to various stresses, and then acts as a checkpoint kinase to arrest damaged tumor cells in a quiescent state and allow cellular repair. Pharmacological inhibition of Mirk may enhance the anti-tumor effect of chemotherapeutic drugs. J. Cell. Biochem. 102: 274,279, 2007. © 2007 Wiley-Liss, Inc. [source] Impaired long-term depression in P2X3 deficient mice is not associated with a spatial learning deficitJOURNAL OF NEUROCHEMISTRY, Issue 5 2006Yue Wang Abstract The hippocampus is a brain region critical for learning and memory processes believed to result from long-lasting changes in the function and structure of synapses. Recent findings suggest that ATP functions as a neurotransmitter or neuromodulator in the mammalian brain, where it activates several different types of ionotropic and G protein-coupled ATP receptors that transduce calcium signals. However, the roles of specific ATP receptors in synaptic plasticity have not been established. Here we show that mice lacking the P2X3 ATP receptor (P2X3KO mice) exhibit abnormalities in hippocampal synaptic plasticity that can be restored by pharmacological modification of calcium-sensitive kinase and phosphatase activities. Calcium imaging studies revealed an attenuated calcium response to ATP in hippocampal neurons from P2X3KO mice. Basal synaptic transmission, paired-pulse facilitation and long-term potentiation are normal at synapses in hippocampal slices from P2X3KO. However, long-term depression is severely impaired at CA1, CA3 and dentate gyrus synapses. Long-term depression can be partially rescued in slices treated with a protein phosphatase 1,2 A activator or by postsynaptic inhibition of calcium/calmodulin-dependent protein kinase II. Despite the deficit in hippocampal long-term depression, P2X3KO mice performed normally in water maze tests of spatial learning, suggesting that long-term depression is not critical for this type of hippocampus-dependent learning and memory. [source] An electrospray mass spectrometric method for accurate mass determination of highly acid-sensitive phosphoramiditesRAPID COMMUNICATIONS IN MASS SPECTROMETRY, Issue 4 2008Zoltán Kupihár An accurate mass determination method utilizing electrospray ionization mass spectrometry is described for analysis of several different types of phosphoramidites that are extremely acid-sensitive compounds. An earlier method, which applied a LiCl/acetonitrile system, was extended for this special application by using polymeric standards including poly(ethylene glycol) (PEG), poly(ethylene glycol) dimethyl ether (PDE) and poly(propylene glycol) (PPG). Concentrations of standards, samples and LiCl were optimized and potential impurities that affect the analyses were also investigated. Copyright © 2008 John Wiley & Sons, Ltd. [source] Genetic characterization reveals no role for the reported ABA receptor, GCR2, in ABA control of seed germination and early seedling development in ArabidopsisTHE PLANT JOURNAL, Issue 6 2007Yajun Gao Summary Abscisic acid (ABA) is perceived by several different types of receptors in plant cells. At the cell surface, the ABA signal is proposed to be perceived by GCR2, which mediates ABA responses in seed germination, early seedling development and stomatal movement. GCR2 was also proposed to be a seven-transmembrane (7TM) G-protein-coupled receptor (GPCR). Here we characterize GCR2 and one of its two homologs, GCR2-LIKE 1 (GCL1), in ABA-mediated seed germination and early seedling development in Arabidopsis. We show that loss-of-function mutations in GCL1 did not confer ABA insensitivity. Similarly, we did not observe ABA insensitivity in three independent gcr2 alleles. Furthermore, we generated gcr2 gcl1 double mutants and found that the double mutants still had near wild-type responses to ABA. Consistent with this, we found that the transcription of ABA marker genes was induced by ABA to levels that were comparable in wild type and gcr2 and gcl1 single and double mutants. On the other hand, the loss-of-function alleles of the sole Arabidopsis heterotrimeric G protein , subunit, GPA1, were hypersensitive to ABA in the ABA-inhibition of seed germination and early seedling development, disfavoring a genetic coupling of GCR2 by GPA1. Using multiple robust transmembrane prediction systems, GCR2 was predicted not to be a 7TM protein, a structural hallmark of GPCRs. Taken together, our results do not support the notion that GCR2 is an ABA-signaling GPCR in seed germination and early seedling development. [source] Studying ion channels in undergraduate laboratoriesBIOCHEMISTRY AND MOLECULAR BIOLOGY EDUCATION, Issue 6 2000Ashley Garrill Abstract This article describes an undergraduate laboratory that introduces students to ion channels and patch clamp electrophysiology. It is given in conjunction with third year biochemistry lectures on membrane transport proteins and utilises cytoplasmic droplets from Characean algae. These droplets are very easily obtainable (the typical preparation time is around ten minutes). contain abundant channel activity and significantly, readily form the high electrical resistance seals that are required for resolution of single channel events. Most students have been able to observe electrical events that are the result of conformational changes in single protein molecules. When the students are not patch clamping they are set a problem that requires them to devise a model of how several different types of channel might interact to produce a cellular response to osmotic challenge. © 2001 IUBMB. Published by Elsevier Science Ltd. All rights reserved. [source] No effects of mobile phone use on cortical auditory change-detection in children: An ERP studyBIOELECTROMAGNETICS, Issue 3 2010Myoung Soo Kwon Abstract We investigated the effect of mobile phone use on the auditory sensory memory in children. Auditory event-related potentials (ERPs), P1, N2, mismatch negativity (MMN), and P3a, were recorded from 17 children, aged 11,12 years, in the recently developed multi-feature paradigm. This paradigm allows one to determine the neural change-detection profile consisting of several different types of acoustic changes. During the recording, an ordinary GSM (Global System for Mobile Communications) mobile phone emitting 902,MHz (pulsed at 217,Hz) electromagnetic field (EMF) was placed on the ear, over the left or right temporal area (SAR1g,=,1.14,W/kg, SAR10g,=,0.82,W/kg, peak value,=,1.21,W/kg). The EMF was either on or off in a single-blind manner. We found that a short exposure (two 6,min blocks for each side) to mobile phone EMF has no statistically significant effects on the neural change-detection profile measured with the MMN. Furthermore, the multi-feature paradigm was shown to be well suited for studies of perception accuracy and sensory memory in children. However, it should be noted that the present study only had sufficient statistical power to detect a large effect size. Bioelectromagnetics 31:191,199, 2010. © 2009 Wiley-Liss, Inc. [source] |