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Seedling Roots (seedling + root)
Selected AbstractsThe Effects of Bacillus pumilus, Isolated from Wheat Rhizosphere, on Resistance in Wheat Seedling Roots against the Take-all Fungus, Gaeumannomyces graminis var. triticiJOURNAL OF PHYTOPATHOLOGY, Issue 11-12 2007E. Sari Abstract The aim of this study was to verify that induced resistance was another mechanism through which Bacillus pumilus 7 km can suppress Gaeumannomyces graminis (Sacc.) Von Arx and Oliver var. tritici Walker (Ggt). Also, plant growth-promotion activity of B. pumilus 7 km and its effect on disease severity of take-all were evaluated. Soil was drenched with B. pumilus 7 km and disease severity, root and shoot fresh weights and root and shoot heights were evaluated. The activities of soluble peroxidase (SPOX), ionically cell wall-bound peroxidase (CWPOX), , -1,3-glucanase, , -1,4-glucanase and the contents of total phenolic compounds were also determined. The results indicated that disease severity in the bacterized roots was significantly less than the pathogen control roots. Also this isolate promoted root height, root and shoot fresh weights, compared with the healthy control plants. Wheat plants treated with B. pumilus 7 km showed increased presence of SPOX, CWPOX, , -1,3-glucanase, , -1,4-glucanase and phenolic compounds in bacterized roots challenged with the pathogen. In this treatment, maximum SPOX, , -1,3-glucanase and , -1,4-glucanase activities on day 4 and CWPOX activity on day 8 were recorded. Also, maximum total phenolic concentration on day 6 was recorded. The results suggest that the inhibitory effect of B. pumilus 7 km on the take-all may be related to its ability to enhance defense responses in the wheat roots. [source] Overexpression of hns in the plant growth-promoting bacterium Enterobacter cloacae UW5 increases root colonizationJOURNAL OF APPLIED MICROBIOLOGY, Issue 6 2010M.M. English Abstract Aims:, Plant growth-promoting rhizobacteria (PGPR) introduced into soil often do not compete effectively with indigenous micro-organisms for plant colonization. The aim of this study was to identify novel genes that are important for root colonization by the PGPR Enterobacter cloacae UW5. Methods and Results:, A library of transposon mutants of Ent. cloacae UW5 was screened for mutants with altered ability to colonize canola roots using a thermal asymmetric interlaced (TAIL)-PCR-based approach. A PCR fragment from one mutant was reproducibly amplified at greater levels from genomic DNA extracted from mutant pools recovered from seedling roots 6 days after seed inoculation compared to that from the cognate inoculum cultures. Competition assays confirmed that the purified mutant designated Ent. cloacae J28 outcompetes the wild-type strain on roots but not in liquid cultures. In Ent. cloacae J28, the transposon is inserted upstream of the hns gene. Quantitative RT-PCR showed that transposon insertion increased expression of hns on roots. Conclusions:, These results indicate that increased expression of hns in Ent. cloacae enhances competitive colonization of roots. Significance and Impact of the Study:, A better understanding of the genes involved in plant colonization will contribute to the development of PGPR that can compete more effectively in agricultural soils. [source] What youngsters say about adults: seedling roots reflect clonal traits of adult plantsJOURNAL OF ECOLOGY, Issue 3 2007MARIE, MILAUEROVÁ Summary 1Grime's theory on plant strategies predicts that the set of traits present in established plants is not correlated with that found in the regenerative stage of the life cycle. We tested this prediction and further investigated whether clonal growth traits, which are found in adult plants but also affect regeneration, are correlated with seedling traits. 2We characterized seedling root systems by their total length, number of root tips and several architectural parameters (length of exterior and interior root links and two topological indices). These below-ground traits were supplemented by the ratio of leaf area to root length, representing relative investment into photosynthesizing surface. We compared seedling traits with clonal growth traits, adult plant heights, and species positions on gradients of nitrogen and water availability. 3Plant species with limited horizontal spread by clonal growth exhibited a larger relative investment in photosynthetic area and also developed larger root systems as seedlings. 4Seedlings of species with taller shoots and those which occur naturally at nutrient-rich sites developed both larger roots and more dichotomously branched root systems (with higher total length and more branches). 5Taking phylogenetic inertia into account showed that this explained large parts of the variation in seedling traits. Relationships between clonal spread and seedling traits were strengthened by phylogenetic correction. 6Our study shows that some of the traits of clonal growth affect both the established and the regenerative stages of the life cycle, suggesting that an evolutionary trade-off exists between the ability to spread clonally and performance at the seedling stage. Species not able to escape from less favourable conditions by extensive clonal spread seem to be more able to exploit the location in which they germinate. [source] Molecular diversity of arbuscular mycorrhizal fungi and patterns of host association over time and space in a tropical forestMOLECULAR ECOLOGY, Issue 12 2002R. Husband Abstract We have used molecular techniques to investigate the diversity and distribution of the arbuscular mycorrhizal (AM) fungi colonizing tree seedling roots in the tropical forest on Barro Colorado Island (BCI), Republic of Panama. In the first year, we sampled newly emergent seedlings of the understory treelet Faramea occidentalis and the canopy emergent Tetragastris panamensis, from mixed seedling carpets at each of two sites. The following year we sampled surviving seedlings from these cohorts. The roots of 48 plants were analysed using AM fungal-specific primers to amplify and clone partial small subunit (SSU) ribosomal RNA gene sequences. Over 1300 clones were screened for random fragment length polymorphism (RFLP) variation and 7% of these were sequenced. Compared with AM fungal communities sampled from temperate habitats using the same method, the overall diversity was high, with a total of 30 AM fungal types identified. Seventeen of these types have not been recorded previously, with the remainder being similar to types reported from temperate habitats. The tropical mycorrhizal population showed significant spatial heterogeneity and nonrandom associations with the different hosts. Moreover there was a strong shift in the mycorrhizal communities over time. AM fungal types that were dominant in the newly germinated seedlings were almost entirely replaced by previously rare types in the surviving seedlings the following year. The high diversity and huge variation detected across time points, sites and hosts, implies that the AM fungal types are ecologically distinct and thus may have the potential to influence recruitment and host composition in tropical forests. [source] Overexpression of rice isoflavone reductase-like gene (OsIRL) confers tolerance to reactive oxygen speciesPHYSIOLOGIA PLANTARUM, Issue 1 2010Sang Gon Kim Isoflavone reductase is an enzyme involved in isoflavonoid biosynthesis in plants. However, rice isoflavone reductase-like gene (OsIRL, accession no. AY071920) has not been unraveled so far. Here, we have characterized its behavior in response to oxidizing agents. Using Northern and Western blot analyses, the OsIRL gene and protein were shown to be down-regulated in young seedling roots treated with reduced glutathione (GSH) and diphenyleneiodonium (DPI), known quenchers of reactive oxygen species (ROS). The OsIRL transcript level in rice suspension-cultured cells was also found to be induced by oxidants such as hydrogen peroxide (H2O2), ferric chloride (FeCl3), methyl viologen (MV) and glucose/glucose oxidase (G/GO), but down-regulated when co-treated with GSH. Furthermore, to investigate whether overexpression of OsIRL in transgenic rice plants promotes resistance to ROS, we generated transgenic rice lines overexpressing the OsIRL gene under an abscisic acid (ABA) inducible promoter. Results showed that the OsIRL transgenic rice line activated by ABA treatment was tolerant against MV and G/GO-induced stress in rice leave and suspension-cultured cells. Our results strongly suggest the involvement of OsIRL in homeostasis of ROS. [source] Gravisensitivity and automorphogenesis of lentil seedling roots grown on board the International Space StationPHYSIOLOGIA PLANTARUM, Issue 1 2008Dominique Driss-Ecole The GRAVI-1 experiment was brought on board the International Space Station by Discovery (December 2006) and carried out in January 2007 in the European Modular Cultivation System facility. For the first run of this experiment, lentil seedlings were hydrated and grown in microgravity for 15 h and then subjected for 13 h 40 min to centrifugal accelerations ranging from 0.29 × 10,2 g to 0.99 × 10,2 g. During the second run, seedlings were grown either for 30 h 30 min in microgravity (this sample was the control) or for 21 h 30 min and then subjected to centrifugal accelerations ranging from 1.2 × 10,2 g to 2.0 × 10,2 g for 9 h. In both cases, root orientation and root curvature were followed by time-lapse photography. Still images were downlinked in near real time to ground Norwegian User Support and Operations Center during the experiment. The position of the root tip and the root curvature were analyzed as a function of time. It has been shown that in microgravity, the embryonic root curved strongly away from the cotyledons (automorphogenesis) and then straightened out slowly from 17 to 30 h following hydration (autotropism). Because of the autotropic straightening of roots in microgravity, their tip was oriented at an angle close to the optimal angle of curvature (120°,135°) for a period of 2 h during centrifugation. Moreover, it has been demonstrated that lentil roots grown in microgravity before stimulation were more sensitive than roots grown in 1 g. In these conditions, the threshold acceleration perceived by these organs was found to be between 0 and 2.0 × 10,3 g and estimated punctually at 1.4 × 10,5 g by using the hyperbolic model for fitting the experimental data and by assuming that autotropism had no or little impact on the gravitropic response. Gravisensing by statoliths should be possible at such a low level of acceleration because the actomyosin system could provide the necessary work to overcome the activation energy for gravisensing. [source] A comparison of ammonium, nitrate and proton net fluxes along seedling roots of Douglas-fir and lodgepole pine grown and measured with different inorganic nitrogen sourcesPLANT CELL & ENVIRONMENT, Issue 3 2008B. J. HAWKINS ABSTRACT Significant spatial variability in NH4+, NO3, and H+ net fluxes was measured in roots of young seedlings of Douglas-fir (Pseudotsuga menziesii) and lodgepole pine (Pinus contorta) with ion-selective microelectrodes. Seedlings were grown with NH4+, NO3,, NH4NO3 or no nitrogen (N), and were measured in solutions containing one or both N ions, or no N in a full factorial design. Net NO3, and NH4+ uptake and H+ efflux were greater in Douglas-fir than lodgepole pine and in roots not exposed to N in pretreatment. In general, the rates of net NH4+ uptake were the same in the presence or absence of NO3,, and vice versa. The highest NO3, influx occurred 0,30 mm from the root apex in Douglas-fir and 0,10 mm from the apex in lodgepole pine. Net NH4+ flux was zero or negative (efflux) at Douglas-fir root tips, and the highest NH4+ influx occurred 5,20 mm from the root tip. Lodgepole pine had some NH4+ influx at the root tips, and the maximum net uptake 5 mm from the root tip. Net H+ efflux was greatest in the first 10 mm of roots of both species. This study demonstrates that nutrient uptake by conifer roots can vary significantly across different regions of the root, and indicates that ion flux profiles along the roots may be influenced by rates of root growth and maturation. [source] Differential expression of three members of the AMT1 gene family encoding putative high-affinity NH4+ transporters in roots of Oryza sativa subspecies indicaPLANT CELL & ENVIRONMENT, Issue 6 2003A. KUMAR ABSTRACT In order to investigate the molecular basis of high-affinity ammonium absorption by roots of rice plants (Oryza sativa subspecies indica) the expression patterns of three members of the AMT1 family of genes in rice seedling roots in response to altered nitrogen provision and diurnal changes in irradiance were examined. The 13NH4+ influx and transcript levels of OsAMT1.1 in roots decreased several fold within 48 h when plants acclimated to 10 µm external NH4+ for 3 weeks were transferred to 10 mm NH4+. Likewise when plants acclimated in 10 mm NH4+ were transferred to 10 µm NH4+, there was an equally rapid up-regulation of OsAMT1.1 and 13NH4+ influx in the roots. Changes in transcript abundance of OsAMT1.2 following these treatments were approximately 50% less than in OsAMT1.1, and changes of OsAMT1.3 expression were even less. By contrast, in response to the diurnal changes of irradiance, root transcript abundance of OsAMT1.3 and 15NH4+ influx increased approximately three-fold late in the photoperiod, whereas OsAMT1.1 and OsAMT1.2 exhibited only modest changes. The present results suggest that high-affinity NH4+ influx is differentially regulated at the transcriptional level through the expression of three members of the OsAMT1 family of genes in roots of rice seedlings in response to changes of N status and daily irradiance. In general, these findings are in agreement with earlier observations in Arabidopsis and tomato. [source] Mitochondrial respiratory pathways modulate nitrate sensing and nitrogen-dependent regulation of plant architecture in Nicotiana sylvestrisTHE PLANT JOURNAL, Issue 6 2008Till K. Pellny Summary Mitochondrial electron transport pathways exert effects on carbon,nitrogen (C/N) relationships. To examine whether mitochondria,N interactions also influence plant growth and development, we explored the responses of roots and shoots to external N supply in wild-type (WT) Nicotiana sylvestris and the cytoplasmic male sterile II (CMSII) mutant, which has a N-rich phenotype. Root architecture in N. sylvestris seedlings showed classic responses to nitrate and sucrose availability. In contrast, CMSII showed an altered ,nitrate-sensing' phenotype with decreased sensitivity to C and N metabolites. The WT growth phenotype was restored in CMSII seedling roots by high nitrate plus sugars and in shoots by gibberellic acid (GA). Genome-wide cDNA-amplified fragment length polymorphism (AFLP) analysis of leaves from mature plants revealed that only a small subset of transcripts was altered in CMSII. Tissue abscisic acid content was similar in CMSII and WT roots and shoots, and growth responses to zeatin were comparable. However, the abundance of key transcripts associated with GA synthesis was modified both by the availability of N and by the CMSII mutation. The CMSII mutant maintained a much higher shoot/root ratio at low N than WT, whereas no difference was observed at high N. Shoot/root ratios were strikingly correlated with root amines/nitrate ratios, values of <1 being characteristic of high N status. We propose a model in which the amine/nitrate ratio interacts with GA signalling and respiratory pathways to regulate the partitioning of biomass between shoots and roots. [source] | ||||||||||