Science Laboratory (science + laboratory)

Distribution by Scientific Domains


Selected Abstracts


Use of multiplex real-time PCR (TaqMan) for the detection of potato viruses,

EPPO BULLETIN, Issue 3-4 2000
N. Boonham
Certain viruses affect the quality of potato tubers for either table use or processing. Visual discrimination of these viruses is problematic because of variable symptoms, but is important if proper controls are to be implemented. Work at the Central Science Laboratory has concentrated on the detection of Potato mop-top pomovirus (PMTV), Tobacco rattle tobravirus (TRV) (both associated with the disease spraing) and the tuber necrotic strain of Potato Y potyvirus (PVYNTN), the symptoms of which can often be confused with spraing. A nucleic acid-based approach has been adopted as TRV is often found as naked RNA with no associated coat protein, and accurate discrimination of PVY strains is impossible by serology. The multiplex TaqMan assay developed in this work streamlines the testing, replacing two separate tests currently used (a TRV RT-PCR and a PMTV enzyme-linked immunosorbent assay) with a single-tube assay, which has no post-PCR manipulations. The assay has been shown to be more sensitive than either of the tests which it replaces, allowing 100- and 10000-fold increases in sensitivity for TRV and PMTV detection respectively. The test reliably detected over 40 different isolates of TRV and PMTV obtained from a wide range of cultivars and locations, including samples where existing tests failed. A PCR-based method capable of discriminating strains of PVY was also developed. [source]


Blood morphine levels in naltrexone-exposed compared to non-naltrexone-exposed fatal heroin overdoses

ADDICTION BIOLOGY, Issue 3 2003
DIANE ARNOLD-REED
The aim of this study was to investigate the association between prior exposure to naltrexone and increased risk of fatal heroin overdose using a review of toxicology reports for heroin-related fatalities between July 1997 to August 1999 for two groups: those treated with oral naltrexone and those who were not treated. Additional information for the oral naltrexone group was obtained from clinic files. Naltrexone-treated deaths were identified from the patient database at the Australian Medical Procedures Research Foundation (AMPRF), Perth, Western Australia (WA) through the Western Australian Department of Health, Data Linkage Project. Non-treated cases were identified from the database at the Forensic Science Laboratory, State Chemistry Centre (WA). We identified and investigated blood morphine concentrations following 21 fatal heroin overdoses with prior exposure to naltrexone and in 71 non-naltrexone-exposed cases over the same time period. The proportion of deaths where heroin use was a major contributing factor was little different in the non-naltrexone compared to the naltrexone-exposed group. Furthermore, in ,acute opiate toxicity' deaths, blood morphine levels were lower in non-naltrexone-exposed compared with naltrexone-exposed cases. Although there was a higher number of deaths designated as rapid (i.e. occurring within 20 minutes) in the naltrexone-exposed (89%) compared with the non-exposed group (72%) this was not statistically significant. Other drug use in relation to heroin-related fatalities is discussed. Findings do not support the hypothesis that prior exposure to naltrexone increases sensitivity to heroin toxicity. [source]


Varietal Differences in Allelopathic Potential of Alfalfa

JOURNAL OF AGRONOMY AND CROP SCIENCE, Issue 1 2002
Tran Dang Xuan
Alfalfa (Medicago sativa L.) plants were found to contain water-soluble substances that inhibited the germination and seedling growth of alfalfa (Chung and Miller 1990, Agron. J. 87, 762,767). Tsuzuki et al. (1999, Rep. Kyushu Branch Crop Sci. Soc. Japan 65, 39,40) discovered allelochemicals in alfalfa plants that could have adverse effects on the growth of some lowland weeds. This study was conducted to investigate varietal differences in allelopathic potential in alfalfa plants. Eight common varieties of Japanese alfalfa (Medicago sativa L.), namely Batasu, Hisawakaba, Kitawakaba, Makiwakaba, Natsuwakaba, Lucerne, Tachiwakaba and Yuba, were grown by conventional methods in the Experimental Field of the Crop Science Laboratory, Faculty of Agriculture, Miyazaki University. Aqueous extracts of both fresh and dried material of alfalfa plants of all varieties significantly inhibited both germination and growth of lettuce (Lactuca sativa L.). Leachates from germinating seeds of almost all alfalfa varieties inhibited elongation of the radicle but produced a negligible increase in germination and only slightly inhibited elongation of the hypocotyl of lettuce plants. Results demonstrated that the degree of inhibition of germination and growth of lettuce varied with the variety of alfalfa. In particular, Lucerne was identified as having the strongest allelopathic potential of the varieties studied. The results suggested that the allelopathic potential of alfalfa might be relating to a gene. Varietätsunterschiede im allelopathischen Potential von Luzerne Luzerne (Medicago sativa L.)-Pflanzen weisen wasserlösliche Substanzen auf, die die Keimung und das Sämlingswachstum von Luzerne inhibieren. Es kann angenommen werden, daß Luzernepflanzen allelopathisch wirkende Verbindungen aufweisen, die das Wachstum von Unkrautpflanzen des Tieflands beeinträchtigen. Die Untersuchung wurde durchgeführt, um das Potential allelopathischer Sortenunterschiede bei Luzerne zu bestimmen. Acht im Anbau verwendete Luzernesorten , Batasu, Hisawakaba, Kitawakaba, Makiwakaba, Natsuwakaba, Lucerne, Tachiwakaba und Yuba , wurden nach konventionellen Verfahren auf dem Versuchsfeld des Pflanzenbauinstitutes der Fakultät der Miyazaki-Universität angebaut. Wässerige Extrakte von frischen und trockenen Luzernepflanzen hemmten bei allen Sorten signifikant die Keimung und das Wachstum von Salat (Lactuca sativa L.). Auszüge keimender Samen der meisten Luzernesorten inhibierten das Längenwachstum der Wurzel, hatten aber kaum Einfluß auf eine Förderung der Keimung und zeigten eine geringe Inhibierung des Längenwachstum des Hypokotyls von Salat. Die Ergebnisse zeigen, daß der Grad der Inhibierung der Keimung des Wachstums von Salat abhängig von den geprüften Luzernesorten ist. Lucerne hat das stärkste allelopathische Potential der Sorten. Die Ergebnisse lassen vermuten, daß das allelopathische Potential genetisch bedingt ist. [source]


A single-crystal time-of-flight neutron diffractometer at a spallation neutron source

JOURNAL OF APPLIED CRYSTALLOGRAPHY, Issue 4 2007
Miwako Takahashi
A single-crystal diffractometer using the time-of-flight (TOF) Laue technique had been operated for studies of structural and magnetic disorder and phase transitions in alloys and magnetic materials at the pulsed spallation neutron source facility of the KEK Neutron Science Laboratory (KENS). In various sample environments, the diffractometer has demonstrated its usefulness in measurements of diffuse scattering for studying local structures, and in surveys of reciprocal space for studying phase transitions and incommensurate structures under the conditions of varying temperature and magnetic field. Particular emphasis is placed on the fact that though the instrument did not receive high-flux neutrons for long wavelengths suitable for the studies of magnetic scattering, it gave good results on the observations of magnetic diffuse scattering and superlattice reflections. Remarks and future tasks of the TOF Laue technique are discussed in relation to the asymmetric pulse shape, separation of the inelastic scattering, and dependence of data correction on the sample quality. [source]


Decisional autonomy of planetary rovers

JOURNAL OF FIELD ROBOTICS (FORMERLY JOURNAL OF ROBOTIC SYSTEMS), Issue 7 2007
Félix Ingrand
To achieve the ever increasing demand for science return, planetary exploration rovers require more autonomy to successfully perform their missions. Indeed, the communication delays are such that teleoperation is unrealistic. Although the current rovers (such as MER) demonstrate a limited navigation autonomy, and mostly rely on ground mission planning, the next generation (e.g., NASA Mars Science Laboratory and ESA Exomars) will have to regularly achieve long range autonomous navigation tasks. However, fully autonomous long range navigation in partially known planetary-like terrains is still an open challenge for robotics. Navigating hundreds of meters without any human intervention requires the robot to be able to build adequate representations of its environment, to plan and execute trajectories according to the kind of terrain traversed, to control its motions, and to localize itself as it moves. All these activities have to be planned, scheduled, and performed according to the rover context, and controlled so that the mission is correctly fulfilled. To achieve these objectives, we have developed a temporal planner and an execution controller, which exhibit plan repair and replanning capabilities. The planner is in charge of producing plans composed of actions for navigation, science activities (moving and operating instruments), communication with Earth and with an orbiter or a lander, while managing resources (power, memory, etc.) and respecting temporal constraints (communication visibility windows, rendezvous, etc.). High level actions also need to be refined and their execution temporally and logically controlled. Finally, in such critical applications, we believe it is important to deploy a component that protects the system against dangerous or even fatal situations resulting from unexpected interactions between subsystems (e.g., move the robot while the robot arm is unstowed) and/or software components (e.g., take and store a picture in a buffer while the previous one is still being processed). In this article we review the aforementioned capabilities, which have been developed, tested, and evaluated on board our rovers (Lama and Dala). After an overview of the architecture design principle adopted, we summarize the perception, localization, and motion generation functions required by autonomous navigation, and their integration and concurrent operation in a global architecture. We then detail the decisional components: a high level temporal planner that produces the robot activity plan on board, and temporal and procedural execution controllers. We show how some failures or execution delays are being taken care of with online local repair, or replanning. © 2007 Wiley Periodicals, Inc. [source]


Internal Validation of the AmpFlSTR YfilerÔ Amplification Kit for Use in Forensic Casework

JOURNAL OF FORENSIC SCIENCES, Issue 1 2008
Ann Marie Gross M.S.
Abstract:, Y-chromosomal short-tandem repeat (Y-STR) amplification has been used in forensic casework at the Bureau of Criminal Apprehension (BCA) Forensic Science Laboratory since 2003. At that time, two separate amplifications were required to type the SWGDAM recommended loci (DYS19, DYS385a/b, DYS389I, DYS389II, DYS390, DYS391, DYS392, DYS393, DYS438, and DYS439). The YfilerÔ kit coamplifies these loci as well as DYS437, DYS448, DYS456, DYS458, DYS635, and Y GATA H4. The YfilerÔ kit was validated following the internal validations outlined in the SWGDAM revised validation guidelines. Our studies show that 0.125 ng of male DNA will generate a complete 17 locus profile and that as little as 0.06 ng of male DNA yields an average of nine loci. In the male,male mixtures, a complete profile from the minor component was detected up to 1:5 ratio; most of the alleles of the minor component were detected at a 1:10 ratio and more than half the alleles of the minor component were detected at a 1:20 ratio. Complete YSTR profiles were obtained when 500 pg male DNA was mixed with female DNA at ratios up to 1:1000. At ratios of 1:5000 and 1:10,000 (male DNA to female DNA) inhibition of the YSTR amplification was evident. The YSTR results obtained for the adjudicated case samples gave significantly more probative information than the autosomal results. Our studies demonstrate that the YfilerÔ kit is extremely sensitive, does not exhibit cross-reactivity with female DNA, successfully types male DNA in the presence of overwhelming amounts of female DNA and is successful in typing actual forensic samples from adjudicated cases. [source]


Interview: David Willetts MP

ASTRONOMY & GEOPHYSICS, Issue 5 2010
Article first published online: 17 SEP 2010
The Minister of State for Universities and Science talks to Lucie Green of Mullard Space Science Laboratory about the new UK Space Agency. [source]


Some Examples of Applications of a Microthermal Desorption Device in the Forensic Laboratory

JOURNAL OF FORENSIC SCIENCES, Issue 5 2009
Jan Andrasko Ph.D.
Abstract:, Several applications of a microthermal desorption device for analysis of small forensic samples are presented. The method uses a solid phase microextraction holder with the fiber removed. In addition to samples of inks on paper, this device was successfully used for analysis of toners, various stains on bank notes, and lipstick stains on paper. Other small items encountered in a forensic science laboratory were also analyzed: particles of smokeless powder, particles of coffee, and automotive clear topcoat layer. The desorbed compounds were analyzed by gas chromatography with a flame ionization detector or by gas chromatography,mass spectrometry. This device can be used in connection with any kind of gas chromatograph. By selection of different injector temperatures, fractionated thermal desorption of samples is achieved. The procedure was demonstrated on samples of ballpoint pen ink of various age. [source]