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Rice Seedlings (rice + seedling)
Selected AbstractsAllelochemical tricin in rice hull and its aurone isomer against rice seedling rot diseasePEST MANAGEMENT SCIENCE (FORMERLY: PESTICIDE SCIENCE), Issue 9 2010Chui-Hua Kong Abstract BACKGROUND: One promising area of rice disease management is the potential of exploiting biological control agents. Rice seedling rot disease caused by soil-borne pathogenic fungi has become a dominant disease problem because of greater use of direct seeding. Rice hull has been potentially used to control paddy weeds, but little information is available on rice disease. This study was conducted to investigate the relationships between disease incidence and soil amended with tricin-releasing rice hull, and to assess fungicidal activity of tricin and its synthesised aurone isomer, with an attempt to develop an allelochemical-based fungicide against rice seedling rot disease. RESULTS: Tricin was detected in all hulls of 12 rice cultivars tested, but its contents in rice hulls varied greatly with the cultivar and genotype. Tricin in rice hulls was released into the soil once amended. Disease incidence was significantly reduced by soil amended with rice hull. Tricin-rich rice hull amendment greatly suppressed soil-borne pathogenic fungi Fusarium oxysporum Schlecht. and Rhizoctonia solani Kühn which cause rice seedling rot disease. In attempting to obtain enough tricin for further experiments, the aurone isomer (5,7,4,-trihydroxy-3,,5,-dimethoxyaurone) of tricin rather than tricin itself was unexpectedly synthesised. This aurone isomer had much stronger fungicidal activity on both F. oxysporum and R. solani than tricin itself. CONCLUSION: Soil amended with tricin-rich rice hull was associated with reduced risk of developing seedling rot disease. The tricin isomer, aurone, is more effective against rice seedling rot disease than tricin itself, making it an ideal lead compound for new fungicide discovery. Copyright © 2010 Society of Chemical Industry [source] Effects of Elevated CO2 on Growth, Carbon Assimilation, Photosynthate Accumulation and Related Enzymes in Rice Leaves during Sink-Source TransitionJOURNAL OF INTEGRATIVE PLANT BIOLOGY, Issue 6 2008Jun-Ying Li Abstract To study the effects of growing rice (Oryza sativa L.) leaves under the treatment of the short-term elevated CO2 during the period of sink-source transition, several physiological processes such as dynamic changes in photosynthesis, photosynthate accumulation, enzyme activities (sucrose phosphate synthase (SPS), and sucrose synthase (SS)), and their specific gene (sps1 and RSus1) expressions in both mature and developing leaf were measured. Rice seedlings with fully expanded sixth leaf (marked as the source leaf, L6) were kept in elevated (700 ,mol/mol) and ambient (350 mol/L) CO2 until the 7th leaf (marked as the sink leaf, L7) fully expanded. The results demonstrated that elevated CO2 significantly increased the rate of leaf elongation and biomass accumulation of L7 during the treatment without affecting the growth of L6. However, in both developing and mature leaves, net photosynthetic assimilation rate (A), all kinds of photosynthate contents such as starch, sucrose and hexose, activities of SPS and SS and transcript levels of sps1 and RSus1 were significantly increased under elevated CO2 condition. Results suggested that the elevated CO2 had facilitated photosynthate assimilation, and increased photosynthate supplies from the source leaf to the sink leaf, which accelerated the growth and sink-source transition in new developing sink leaves. The mechanisms of SPS regulation by the elevated CO2 was also discussed. [source] Isolation and identification of a potent allelopathic substance in rice root exudatesPHYSIOLOGIA PLANTARUM, Issue 3 2002Hisashi Kato-Noguchi A search for growth inhibitors in rice root exudates was undertaken in order to clarify the allelopathic system in rice (Oryza sativa L.). Rice seedlings inhibited the growth of cress (Lepidium sativum L.) and lettuce (Lactuca sativa L.) seedlings when the cress and lettuce were grown with rice seedlings. The putative compound causing the inhibitory effect of rice seedlings was isolated from their culture solution, and the chemical structure of the inhibitor was determined by spectral data as momilactone B. Momilactone B inhibited the growth of cress and lettuce seedlings at concentrations greater than 3 and 30 µM, respectively. The concentration of momilactone B was 3.4 and 1.1 nmol per seedling in the culture solutions of husked and non-husked rice seedlings, respectively. These results suggest that rice seedlings may release momilactone B into the environment and the stress caused by the husk-treatment may increase the amount of momilactone B released. Thus, momilactone B may play an important role in rice allelopathy. [source] Adaptation of plasma membrane H+ -ATPase of rice roots to low pH as related to ammonium nutritionPLANT CELL & ENVIRONMENT, Issue 10 2009YIYONG ZHU ABSTRACT The preference of paddy rice for NH4+ rather than NO3 - is associated with its tolerance to low pH since a rhizosphere acidification occurs during NH4+ absorption. However, the adaptation of rice root to low pH has not been fully elucidated. This study investigated the acclimation of plasma membrane H+ -ATPase of rice root to low pH. Rice seedlings were grown either with NH4+ or NO3 - . For both nitrogen forms, the pH value of nutrient solutions was gradually adjusted to pH 6.5 or 3.0. After 4 d cultivation, hydrolytic H+ -ATPase activity, Vmax, Km, H+ -pumping activity, H+ permeability and pH gradient across the plasma membrane were significantly higher in rice roots grown at pH 3.0 than at 6.5, irrespective of the nitrogen forms supplied. The higher activity of plasma membrane H+ -ATPase of adapted rice roots was attributed to the increase in expression of OSA1, OSA3, OSA7, OSA8 and OSA9 genes, which resulted in an increase of H+ -ATPase protein concentration. In conclusion, a high regulation of various plasma membrane H+ -ATPase genes is responsible for the adaptation of rice roots to low pH. This mechanism may be partly responsible for the preference of rice plants to NH4+ nutrition. [source] Allelochemical tricin in rice hull and its aurone isomer against rice seedling rot diseasePEST MANAGEMENT SCIENCE (FORMERLY: PESTICIDE SCIENCE), Issue 9 2010Chui-Hua Kong Abstract BACKGROUND: One promising area of rice disease management is the potential of exploiting biological control agents. Rice seedling rot disease caused by soil-borne pathogenic fungi has become a dominant disease problem because of greater use of direct seeding. Rice hull has been potentially used to control paddy weeds, but little information is available on rice disease. This study was conducted to investigate the relationships between disease incidence and soil amended with tricin-releasing rice hull, and to assess fungicidal activity of tricin and its synthesised aurone isomer, with an attempt to develop an allelochemical-based fungicide against rice seedling rot disease. RESULTS: Tricin was detected in all hulls of 12 rice cultivars tested, but its contents in rice hulls varied greatly with the cultivar and genotype. Tricin in rice hulls was released into the soil once amended. Disease incidence was significantly reduced by soil amended with rice hull. Tricin-rich rice hull amendment greatly suppressed soil-borne pathogenic fungi Fusarium oxysporum Schlecht. and Rhizoctonia solani Kühn which cause rice seedling rot disease. In attempting to obtain enough tricin for further experiments, the aurone isomer (5,7,4,-trihydroxy-3,,5,-dimethoxyaurone) of tricin rather than tricin itself was unexpectedly synthesised. This aurone isomer had much stronger fungicidal activity on both F. oxysporum and R. solani than tricin itself. CONCLUSION: Soil amended with tricin-rich rice hull was associated with reduced risk of developing seedling rot disease. The tricin isomer, aurone, is more effective against rice seedling rot disease than tricin itself, making it an ideal lead compound for new fungicide discovery. Copyright © 2010 Society of Chemical Industry [source] The 6-phosphogluconate Dehydrogenase Genes Are Responsive to Abiotic Stresses in RiceJOURNAL OF INTEGRATIVE PLANT BIOLOGY, Issue 5 2007Fu-Yun Hou Abstract Glucose-6-phosphate dehydrogenase (G6PDH, E.C. 1.1.1.49) and 6-phosphogluconate dehydrogenase (6PGDH, EC 1.1.1.44) are both key enzymes of the pentose phosphate pathway (PPP). The OsG6PDH1 and Os6PGDH1 genes encoding cytosolic G6PDH and cytosolic 6PGDH were isolated from rice (Oryza sativa L.). We have shown that Os6PGDH1 gene was up-regulated by salt stress. Here we reported the isolation and characterization of Os6PGDH2 from rice, which encode the plastidic counterpart of 6PGDH. Genomic organization analysis indicated that OsG6PDH1 and OsG6PDH2 genes contain multiple introns, whereas two Os6PGDH1 and Os6PGDH2 genes have no introns in their translated regions. In a step towards understanding the functions of the pentose phosphate pathway in plants in response to various abiotic stresses, the expressions of four genes in the rice seedlings treated by drought, cold, high salinity and abscisic acid (ABA) were investigated. The results show that OsG6PDH1 and OsG6PDH2 are not markedly regulated by the abiotic stresses detected. However, the transcript levels of both Os6PGDH1 and Os6PGDH2 are up-regulated in rice seedlings under drought, cold, high salinity and ABA treatments. Meanwhile, the enzyme activities of G6PDH and 6PGDH in the rice seedlings treated by various abiotic stresses were investigated. Like the mRNA expression patterns, G6PDH activity remains constant but the 6PGDH increases steadily during the treatments. Taken together, we suggest that the pentose phosphate pathway may play an important role in rice responses to abiotic stresses and the second key enzyme of PPP, 6PGDH, may function as a regulator controlling the efficiency of the pathway under abiotic stresses. (Handling editor: Kang Chong) [source] Monitoring the colonization of sugarcane and rice plants by the endophytic diazotrophic bacterium Gluconacetobacter diazotrophicus marked with gfp and gusA reporter genesLETTERS IN APPLIED MICROBIOLOGY, Issue 3 2010L.F.M. Rouws Abstract Aims:, To evaluate the colonization process of sugarcane plantlets and hydroponically grown rice seedlings by Gluconacetobacter diazotrophicus strain PAL5 marked with the gusA and gfp reporter genes. Methods and Results:, Sugarcane plantlets inoculated in vitro with PAL5 carrying the gfp::gusA plasmid pHRGFPGUS did not present green fluorescence, but ,-glucuronidase (GUS)-stained bacteria could be observed inside sugarcane roots. To complement this existing inoculation methodology for micropropagated sugarcane with a more rapid colonization assay, we employed hydroponically grown gnotobiotic rice seedlings to study PAL5,plant interaction. PAL5 could be isolated from the root surface (108 CFU g,1) and from surface-disinfected root and stem tissues (104 CFU g,1) of inoculated plants, suggesting that PAL5 colonized the internal plant tissues. Light microscopy confirmed the presence of bacteria inside the root tissue. After inoculation of rice plantlets with PAL5 marked with the gfp plasmid pHRGFPTC, bright green fluorescent bacteria could be seen colonizing the rice root surface, mainly at the sites of lateral root emergence, at root caps and on root hairs. Conclusion:, The plasmids pHRGFPGUS and pHRGFPTC are valid tools to mark PAL5 and monitor the colonization of micropropagated sugarcane and hydroponic rice seedlings. Significance and Impact of the Study:, These tools are of use to: (i) study PAL5 mutants affected in bacteria,plant interactions, (ii) monitor plant colonization in real time and (iii) distinguish PAL5 from other bacteria during the study of mixed inoculants. [source] Characterization of four rice mutants with alterations in the defence response pathwayMOLECULAR PLANT PATHOLOGY, Issue 1 2005M. A. CAMPBELL SUMMARY A fast-neutron mutagenized population of rice seedlings was screened with Magnaporthe grisea, the causal agent of rice blast disease, to identify mutants with alterations in the defence response. Three mutant lines, ebr1, ebr2 and ebr3 (enhanced blast resistance) were identified that display enhanced resistance to M. grisea. ebr1 and ebr3 also confer enhanced resistance to the bacterial pathogen Xanthomonas oryzae pv. oryzae (Xoo). ebr3 develops a lesion mimic (LM) phenotype upon inoculation with M. grisea, and the phenotype is also induced by a shift in environmental conditions. The fourth mutant line, ncr1 (necrosis in rice), has an LM phenotype under all conditions tested and lacks enhanced resistance to either M. grisea or Xoo. Complementation testing using the mutant lines ebr3 and ncr1 indicates that the ebr3 and ncr1 loci are nonallelic and recessive. ebr1 and ebr2 display no alterations in expression of the rice pathogenesis-related (PR) genes PBZ1 and PR1, compared to wild-type CO39. ebr3 has an elevated expression of PBZ1 and PR1 only in tissue displaying the LM phenotype. ncr1 strongly expresses PBZ1 in tissue displaying the LM phenotype, whereas PR1 expression in this tissue is similar to wild-type CO39. [source] Isolation and identification of a potent allelopathic substance in rice root exudatesPHYSIOLOGIA PLANTARUM, Issue 3 2002Hisashi Kato-Noguchi A search for growth inhibitors in rice root exudates was undertaken in order to clarify the allelopathic system in rice (Oryza sativa L.). Rice seedlings inhibited the growth of cress (Lepidium sativum L.) and lettuce (Lactuca sativa L.) seedlings when the cress and lettuce were grown with rice seedlings. The putative compound causing the inhibitory effect of rice seedlings was isolated from their culture solution, and the chemical structure of the inhibitor was determined by spectral data as momilactone B. Momilactone B inhibited the growth of cress and lettuce seedlings at concentrations greater than 3 and 30 µM, respectively. The concentration of momilactone B was 3.4 and 1.1 nmol per seedling in the culture solutions of husked and non-husked rice seedlings, respectively. These results suggest that rice seedlings may release momilactone B into the environment and the stress caused by the husk-treatment may increase the amount of momilactone B released. Thus, momilactone B may play an important role in rice allelopathy. [source] Up-Regulation of OsBIHD1, a Rice Gene Encoding BELL Homeodomain Transcriptional Factor, in Disease Resistance ResponsesPLANT BIOLOGY, Issue 5 2005H. Luo Abstract: In the present study, we cloned and identified a full-length cDNA of a rice gene, OsBIHD1, encoding a homeodomain type transcriptional factor. OsBIHD1 is predicted to encode a 642 amino acid protein and the deduced protein sequence of OsBIHD1 contains all conserved domains, a homeodomain, a BELL domain, a SKY box, and a VSLTLGL box, which are characteristics of the BELL type homedomain proteins. The recombinant OsBIHD1 protein expressed in Escherichia coli bound to the TGTCA motif that is the characteristic cis -element DNA sequence of the homeodomain transcriptional factors. Subcellular localization analysis revealed that the OsBIHD1 protein localized in the nucleus of the plant cells. The OsBIHD1 gene was mapped to chromosome 3 of the rice genome and is a single-copy gene with four exons and three introns. Northern blot analysis showed that expression of OsBIHD1 was activated upon treatment with benzothiadiazole (BTH), which is capable of inducing disease resistance. Expression of OsBIHD1 was also up-regulated rapidly during the first 6 h after inoculation with Magnaporthe grisea in BTH-treated rice seedlings and during the incompatible interaction between M. grisea and a resistant genotype. These results suggest that OsBIHD1 is a BELL type of homeodomain transcription factor present in the nucleus, whose induction is associated with resistance response in rice. [source] Carbon isotope discrimination: potential for screening salinity tolerance in rice at the seedling stage using hydroponicsPLANT BREEDING, Issue 3 2005R. Shaheen Abstract Rice is a moderately salt-sensitive crop species and soil salinity is the single most widespread soil toxicity problem lacing rice production. The quantification of salinity resistance poses serious problems in the field because of climatic factors and field heterogeneity. In the present study. rice germplasm obtained from the International Rice Research Institute (IRRI). Philippines, was screened in a naturally lit (11 h daylight) glasshouse-based hydroponics unit at two salinity levels (4 and 6 dS/m), Phenotypic performance based on survival of tolerant, moderately tolerant and susceptible isogenic lines along with tolerant and susceptible parents was evaluated after 10 and 13 days of salt stress. Plants were harvested after second scoring and carbon isotope discrimination in the leaves (A) was measured. ,1 ranged from 19.5 to 22.9%, A highly significant negative correlation (r =,0.95. P < 0.001) between , and visual scoring was observed. Data indicated the potential of using , as a physiological indicator for salinity tolerance in rice seedlings grown in hydroponics. [source] Silicon deposition in the root reduces sodium uptake in rice (Oryza sativa L.) seedlings by reducing bypass flowPLANT CELL & ENVIRONMENT, Issue 10 2006H. J. GONG ABSTRACT Sodium chloride reduces the growth of rice seedlings, which accumulate excessive concentrations of sodium and chloride ions in their leaves. In this paper, we describe how silicon decreases transpirational bypass flow and ion concentrations in the xylem sap in rice (Oryza sativa L.) seedlings growing under NaCl stress. Salt (50 mM NaCl) reduced the growth of shoots and roots: adding silicate (3 mM) to the saline culture solution improved the growth of the shoots, but not roots. The improvement of shoot growth in the presence of silicate was correlated with reduced sodium concentration in the shoot. The net transport rate of Na from the root to shoot (expressed per unit of root mass) was also decreased by added silicate. There was, however, no effect of silicate on the net transport of potassium. Furthermore, in salt-stressed plants, silicate did not decrease the transpiration, and even increased it in seedlings pre-treated with silicate for 7 d prior to salt treatment, indicating that the reduction of sodium uptake by silicate was not simply through a reduction in volume flow from root to shoot. Experiments using trisodium-8-hydroxy-1,3,6-pyrenetrisulphonic acid (PTS), an apoplastic tracer, showed that silicate dramatically decreased transpirational bypass flow in rice (from about 4.2 to 0.8%), while the apparent sodium concentration in the xylem, which was estimated indirectly from the flux data, decreased from 6.2 to 2.8 mM. Direct measurements of the concentration of sodium in xylem sap sampled using Philaenus spumarius confirmed that the apparent reduction was not a consequence of sodium recycling. X-ray microanalysis showed that silicon was deposited in the outer part of the root and in the endodermis, being more obvious in the latter than in the former. The results suggest that silicon deposition in the exodermis and endodermis reduced sodium uptake in rice (Oryza sativa L.) seedlings under NaCl stress through a reduction in apoplastic transport across the root. [source] Differential expression of three members of the AMT1 gene family encoding putative high-affinity NH4+ transporters in roots of Oryza sativa subspecies indicaPLANT CELL & ENVIRONMENT, Issue 6 2003A. KUMAR ABSTRACT In order to investigate the molecular basis of high-affinity ammonium absorption by roots of rice plants (Oryza sativa subspecies indica) the expression patterns of three members of the AMT1 family of genes in rice seedling roots in response to altered nitrogen provision and diurnal changes in irradiance were examined. The 13NH4+ influx and transcript levels of OsAMT1.1 in roots decreased several fold within 48 h when plants acclimated to 10 µm external NH4+ for 3 weeks were transferred to 10 mm NH4+. Likewise when plants acclimated in 10 mm NH4+ were transferred to 10 µm NH4+, there was an equally rapid up-regulation of OsAMT1.1 and 13NH4+ influx in the roots. Changes in transcript abundance of OsAMT1.2 following these treatments were approximately 50% less than in OsAMT1.1, and changes of OsAMT1.3 expression were even less. By contrast, in response to the diurnal changes of irradiance, root transcript abundance of OsAMT1.3 and 15NH4+ influx increased approximately three-fold late in the photoperiod, whereas OsAMT1.1 and OsAMT1.2 exhibited only modest changes. The present results suggest that high-affinity NH4+ influx is differentially regulated at the transcriptional level through the expression of three members of the OsAMT1 family of genes in roots of rice seedlings in response to changes of N status and daily irradiance. In general, these findings are in agreement with earlier observations in Arabidopsis and tomato. [source] Effects of different Nitrogen forms and osmotic stress on water use efficiency of rice (Oryza sativa)ANNALS OF APPLIED BIOLOGY, Issue 1 2008S. Guo Abstract A hydroponic experiment with simulated water stress induced by polyethylene glycol (PEG) was conducted in greenhouse to study the effects of different nitrogen (N) forms (; and the mixture of and ) on water stress tolerance and water use efficiency (WUE and WUET) of different rice cultivars. Two rice cultivars (cv. ,Shanyou 63' hybrid indica and ,Yangdao 6' indica, China) were grown under non-water- or water-stressed condition [10% (w/v) PEG, molecular weight 6000] with different N forms for 3 weeks. Under non-water stress, the biomass of Shanyou 63 was 50.0% and 64.3% and of Yangdao 6 was 6.9% and 87.8% higher under the supply of mixture of and than either under the sole supply of or , respectively; under water stress, the biomass of both rice cultivars decreased in all three nitrogen forms compared with non-water stress; however, the inhibitory effect of water stress on biomass varied between and nutrition; the reduction of dry matter was significantly higher in than in nutrition. Compared with non-water stress, under water stressed condition, WUE of both two rice cultivars significantly decreased in supply; WUE did not vary in and the mixture supply. It is concluded that (a) the resistance of water stress of rice seedlings is related to nitrogen form; (b) under water stress, could maintain a higher WUE compared with ; (c) hybrid indica rice seedlings have a higher water stress tolerance than indica rice seedlings. [source] | ||||||||||