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Relative Proportion (relative + proportion)
Selected AbstractsArctiid moth ensembles along a successional gradient in the Ecuadorian montane rain forest zone: how different are subfamilies and tribes?JOURNAL OF BIOGEOGRAPHY, Issue 1 2006Nadine Hilt Abstract Aim, We examined changes in the species diversity and faunal composition of arctiid moths along a successional gradient at a fine spatial scale in one of the world's hot spots for moths, the Andean montane rain forest zone. We specifically aimed to discover whether moth groups with divergent life histories respond differentially to forest recovery. Location, Southern Ecuador (province Zamora-Chinchipe) along a gradient from early successional stages to mature forest understorey at elevations of 1800,2005 m a.s.l. Methods, Moths were sampled with weak light traps at 21 sites representing three habitat categories (early and late succession, mature forest understorey), and were analysed at species level. Relative proportions were calculated from species numbers as well as from specimen numbers. Fisher's , was used as a measure of local diversity, and for ordination analyses non-metric multidimensional scaling (NMDS) was carried out. Results, Proportions of higher arctiid taxa changed distinctly along the successional gradient. Ctenuchini (wasp moths) contributed more strongly to ensembles in natural forest, whereas Lithosiinae (lichen moths) decreased numerically with forest recovery. Arctiid species diversity (measured as Fisher's ,) was high in all habitats sampled. The three larger subordinated taxa contributed differentially to richness: Phaegopterini (tiger moths) were always the most diverse clade, followed by Ctenuchini and Lithosiinae. Local species diversity was higher in successional habitats than in forest understorey, and this was most pronounced for the Phaegopterini. Dominance of a few common species was higher, and the proportion of species represented as singletons was lower, than reported for many other tropical arthropod communities. NMDS revealed a significant segregation between ensembles from successional sites and from forest understorey for all larger subordinated taxa (Phaegopterini, Ctenuchini, Lithosiinae). Abandoned pastures held an impoverished, distinct fauna. Faunal segregation was more pronounced for rare species. Ordination axes reflected primarily the degree of habitat disturbance (openness of vegetation, distance of sites from mature forest) and, to a lesser extent, altitude, but not distance between sampling sites. Main conclusions, Despite the geographical proximity of the 21 sites and the pronounced dispersal abilities of adult arctiid moths, local ecological processes were strong enough to allow differentiation between ensembles from mature forest and disturbed sites, even at the level of subfamilies and tribes. Differences in morphology and life-history characteristics of higher arctiid taxa were reflected in their differential representation (proportions of species and individuals) at the sites, whereas patterns of alpha and beta diversity were concordant. However, concordance was too low to allow for reliable extrapolation, in terms of biodiversity indication, from one tribe or subfamily to the entire family Arctiidae. Phaegopterini (comprising more putative generalist feeders during the larval stages) benefited from habitat disturbance, whereas Ctenuchini (with host-specialist larvae) were more strongly affiliated with forest habitats. [source] Offspring production and development in the parasitoid wasp Melittobia clavicornis (Cameron) (Hymenoptera: Eulophidae) from JapanENTOMOLOGICAL SCIENCE, Issue 1 2004Jorge M. GONZÁLEZ Abstract The development time, sex ratio and offspring production of Melittobia clavicornis reared with wild, facultative and factitious hosts are presented. Known hosts and different biological aspects presented in previously published reports are summarized and clarified. Immature development time was equivalent or slightly longer than that of other Melittobia species, and the sex ratio was approximately 97% female. Total offspring numbers were considerably lower than that of other Melittobia species using the same hosts. We report female dimorphism in this species for the first time. The number and relative proportion of brachypterous morph females produced was higher than that in other species of the genus. [source] Comparative analysis of genome fragments of Acidobacteria from deep Mediterranean planktonENVIRONMENTAL MICROBIOLOGY, Issue 10 2008Achim Quaiser Summary Acidobacteria constitute a still poorly studied phylum that is well represented in soils. Recent studies suggest that members of this phylum may be also abundant in deep-sea plankton, but their relative abundance and ecological role in this ecosystem are completely unknown. A recent screening of three metagenomic deep-sea libraries of bathypelagic plankton from the South Atlantic (1000 m depth), the Adriatic (1000 m depth) and the Ionian (3000 m depth) seas in the Mediterranean revealed an unexpected relative proportion of acidobacterial fosmids, which affiliated to the Solibacterales (Group 3), to the Group 11 and, most frequently, to the Group 6 of this diverse phylum. Here, we present the comparative analysis of 11 acidobacterial genome fragments containing the rrn operon from these Mediterranean libraries. A highly conserved syntenic region spanning up to 30 kb and containing up to 25 open reading frames was shared by Group 6 Acidobacteria. Synteny was also partially conserved in distantly related acidobacterial genome fragments derived from a metagenomic soil library, indicating a remarkable conservation of this genomic region within these Acidobacteria. A search for Acidobacteria -specific hits in directly comparable, available fosmid-end sequences from soil and marine metagenomic libraries showed a significant increase of their relative proportion in plankton libraries as a function of increasing depth reaching, at high depth, levels nearly comparable to those of soil. Thus, our results suggest that Acidobacteria are abundant and represent a significant proportion of the microbial community in the deep-sea ecosystem. [source] Response of zooplankton communities to liquid creosote in freshwater microcosmsENVIRONMENTAL TOXICOLOGY & CHEMISTRY, Issue 2 2001Paul K. Sibley Abstract In this study, the response of zooplankton communities to single applications of liquid creosote in model aquatic ecosystems (microcosms) was evaluated. Liquid creosote was applied to 14 microcosms at concentrations ranging from 0.06 to 109 mg/L. Two microcosms served as controls. Zooplankton samples were collected from each microcosm on days 7 and 1 before treatment and on days 2, 5, 7, 14, 21, 28, 43, 55, and 83 following treatment. Temporal changes (response-recovery) in composition of the zooplankton community were assessed using principal response curves (PRC). Creosote induced a rapid, concentrationdependent reduction in zooplankton abundance and number of taxa, with maximum response (50,100% reduction in population densities) occurring between 5 and 7 d after treatment. Taxa that dominated at the time of treatment experienced the greatest impact, as indicated by large, positive species weight values (>1) from the PRC analysis. Many of these taxa recovered to pretreatment or control levels during the posttreatment period, with the degree and duration of recovery being strongly dependent on concentration. Creosote had little effect on species composition at less than 1.1 mg/L, because changes in the types and relative proportion of species contributed from Cladocera, Rotifera, and Copepoda were comparable to those observed in control microcosms. However, a significant shift in species composition was observed at concentrations greater than 1.1 mg/L; these microcosms were generally dominated by low numbers of rotifers, some of which had not been collected before treatment. Community-level effect concentrations (EC50s) were 44.6 and 46.6 ,g/L at 5 and 7 d, respectively, based on nominal creosote. Corresponding no-effect concentrations were 13.9 and 5.6 ,g/L. The results of this field study indicate that creosote may pose a significant risk to zooplankton communities at environmental concentrations potentially encountered during spills and/or leaching events. [source] Maintenance of the relative proportion of oligodendrocytes to axons even in the absence of BAX and BAKEUROPEAN JOURNAL OF NEUROSCIENCE, Issue 11 2009Kumi Kawai Abstract Highly purified oligodendroglial lineage cells from mice lacking functional bax and bak genes were resistant to apoptosis after in-vitro differentiation, indicating an essential role of the intrinsic apoptotic pathway in apoptosis of oligodendrocytes in the absence of neurons (axons) and other glial cells. These mice therefore provide a valuable tool with which to evaluate the significance of the intrinsic apoptotic pathway in regulating the population sizes of oligodendrocytes and oligodendroglial progenitor cells. Quantitative analysis of the optic nerves and the dorsal columns of the spinal cord revealed that the absolute numbers of mature oligodendrocytes immunolabeled for aspartoacylase and adult glial progenitor cells expressing NG2 chondroitin sulfate proteoglycan were increased in both white matter tracts of adult bax/bak -deficient mice and, to a lesser extent, bax -deficient mice, except that there was no increase in NG2-positive progenitor cells in the dorsal columns of these strains of mutant mice. These increases in mature oligodendrocytes and progenitor cells in bax/bak -deficient mice were unexpectedly proportional to increases in numbers of axons in these white matter tracts, thus retaining the oligodendroglial lineage to axon ratios of at most 1.3-fold of the physiological numbers. This is in contrast to the prominent expansion in numbers of neural precursor cells in the subventricular zones of these adult mutant mice. Our study indicates that homeostatic control of cell number is different for progenitors of the oligodendroglial and neuronal lineages. Furthermore, regulatory mechanism(s) operating in addition to apoptotic elimination through the intrinsic pathway, appear to prevent the overproduction of highly mitotic oligodendroglial progenitor cells. [source] Existing in plenty: abundance, biomass and diversity of ciliates and meiofauna in small streamsFRESHWATER BIOLOGY, Issue 4 2008JULIA REISS Summary 1. The ciliate and metazoan meiofaunal assemblages of two contrasting lowland streams in south-east England were examined over the period of a year, using a high taxonomic resolution. Monthly samples were taken from an oligotrophic, acid stream (Lone Oak) and a circumneutral, nutrient-rich stream (Pant) between March 2003 and February 2004. 2. We assessed the relative importance of ciliates and rotifers within the small-sized benthic assemblage with respect to their abundance, biomass and species richness. In addition, we examined the influence of abiotic and biotic parameters and season on the assemblage composition at two levels of taxonomic resolution (species and groups). 3. Ciliates dominated the assemblages numerically, with maximum densities of over 900 000 and 6 000 000 ind. m,2 in Lone Oak and Pant respectively. Rotifers and nematodes dominated meiofaunal densities, although their contribution to total meiofaunal biomass (maxima of 71.9 mgC m,2 in Lone Oak and of 646.8 mgC m,2 in the Pant) was low and rotifer biomass equalled that of ciliates. 4. Although the two streams differed in terms of total abundance of ciliates and meiofauna and shared only 7% of species, the relative proportion of groups was similar. Sediment grain size distribution (the percentile representing the 0.5,1 mm fraction) was correlated with assemblage structure at the species level, revealing the tight coupling between these small organisms and their physical environment. Seasonal changes in the relative abundance of groups followed similar patterns in both streams, and were correlated with the abundance of cyclopoid copepods and temperature. 5. Information on these highly abundant but often overlooked faunal groups is essential for estimates of overall abundance, biomass, species richness and productivity in the benthos, and as such has important implications for several areas of aquatic research, e.g. for those dealing with trophic dynamics. [source] Sources of plant-derived carbon and stability of organic matter in soil: implications for global changeGLOBAL CHANGE BIOLOGY, Issue 8 2009SUSAN E. CROW Abstract Alterations in forest productivity and changes in the relative proportion of above- and belowground biomass may have nonlinear effects on soil organic matter (SOM) storage. To study the influence of plant litter inputs on SOM accumulation, the Detritus Input Removal and Transfer (DIRT) Experiment continuously alters above- and belowground plant inputs to soil by a combination of trenching, screening, and litter addition. Here, we used biogeochemical indicators [i.e., cupric oxide extractable lignin-derived phenols and suberin/cutin-derived substituted fatty acids (SFA)] to identify the dominant sources of plant biopolymers in SOM and various measures [i.e., soil density fractionation, laboratory incubation, and radiocarbon-based mean residence time (MRT)] to assess the stability of SOM in two contrasting forests within the DIRT Experiment: an aggrading deciduous forest and an old-growth coniferous forest. In the deciduous forest, removal of both above- and belowground inputs increased the total amount of SFA over threefold compared with the control, and shifted the SFA signature towards a root-dominated source. Concurrently, light fraction MRT increased by 101 years and C mineralization during incubation decreased compared with the control. Together, these data suggest that root-derived aliphatic compounds are a source of SOM with greater relative stability than leaf inputs at this site. In the coniferous forest, roots were an important source of soil lignin-derived phenols but needle-derived, rather than root-derived, aliphatic compounds were preferentially preserved in soil. Fresh wood additions elevated the amount of soil C recovered as light fraction material but also elevated mineralization during incubation compared with other DIRT treatments, suggesting that not all of the added soil C is directly stabilized. Aboveground needle litter additions, which are more N-rich than wood debris, resulted in accelerated mineralization of previously stored soil carbon. In summary, our work demonstrates that the dominant plant sources of SOM differed substantially between forest types. Furthermore, inputs to and losses from soil C pools likely will not be altered uniformly by changes in litter input rates. [source] Development of a stable isotope index to assess decadal-scale vegetation change and application to woodlands of the Burdekin catchment, AustraliaGLOBAL CHANGE BIOLOGY, Issue 7 2007EVELYN KRULL Abstract Forty-four study sites were established in remnant woodland in the Burdekin River catchment in tropical north-east Queensland, Australia, to assess recent (decadal) vegetation change. The aim of this study was further to evaluate whether wide-scale vegetation ,thickening' (proliferation of woody plants in formerly more open woodlands) had occurred during the last century, coinciding with significant changes in land management. Soil samples from several depth intervals were size separated into different soil organic carbon (SOC) fractions, which differed from one another by chemical composition and turnover times. Tropical (C4) grasses dominate in the Burdekin catchment, and thus ,13C analyses of SOC fractions with different turnover times can be used to assess whether the relative proportion of trees (C3) and grasses (C4) had changed over time. However, a method was required to permit standardized assessment of the ,13C data for the individual sites within the 13 Mha catchment, which varied in soil and vegetation characteristics. Thus, an index was developed using data from three detailed study sites and global literature to standardize individual isotopic data from different soil depths and SOC fractions to reflect only the changed proportion of trees (C3) to grasses (C4) over decadal timescales. When applied to the 44 individual sites distributed throughout the Burdekin catchment, 64% of the sites were shown to have experienced decadal vegetation thickening, while 29% had remained stable and the remaining 7% had thinned. Thus, the development of this index enabled regional scale assessment and comparison of decadal vegetation patterns without having to rely on prior knowledge of vegetation changes or aerial photography. [source] Alteration of the food web along the Antarctic Peninsula in response to a regional warming trendGLOBAL CHANGE BIOLOGY, Issue 12 2004Mark A. Moline Abstract In the nearshore coastal waters along the Antarctic Peninsula, a recurrent shift in phytoplankton community structure, from diatoms to cryptophytes, has been documented. The shift was observed in consecutive years (1991,1996) during the austral summer and was correlated in time and space with glacial melt-water runoff and reduced surface water salinities. Elevated temperatures along the Peninsula will increase the extent of coastal melt-water zones and the seasonal prevalence of cryptophytes. This is significant because a change from diatoms to cryptophytes represents a marked shift in the size distribution of the phytoplankton community, which will, in turn, impact the zooplankton assemblage. Cryptophytes, because of their small size, are not grazed efficiently by Antarctic krill, a keystone species in the food web. An increase in the abundance and relative proportion of cryptophytes in coastal waters along the Peninsula will likely cause a shift in the spatial distribution of krill and may allow also for the rapid asexual proliferation of carbon poor gelatinous zooplankton, salps in particular. This scenario may account for the reported increase in the frequency of occurrence and abundance of large swarms of salps within the region. Salps are not a preferred food source for organisms that occupy higher trophic levels in the food web, specifically penguins and seals, and thus negative feedbacks to the ecology of these consumers can be anticipated as a consequence of shifts in phytoplankton community composition. [source] Superhydrophobic to Superhydrophilic Wetting Control in Graphene FilmsADVANCED MATERIALS, Issue 19 2010Javad Rafiee The wetting of graphene films from superhydrophobic (contact angle of ,160°) to superhydrophilic (,0°) is controlled using surface chemistry/roughness effects. Graphene sheets dispersed in water/acetone solvents are deposited on various substrates, where the contact angle of the graphene films could be tuned from superhydrophobic to superhydrophilic by simply controlling the relative proportion of acetone and water in the solvent. [source] Geochemical weathering at the bed of Haut Glacier d'Arolla, Switzerland,a new modelHYDROLOGICAL PROCESSES, Issue 5 2002M. Tranter Waters were sampled from 17 boreholes at Haut Glacier d'Arolla during the 1993 and 1994 ablation seasons. Three types of concentrated subglacial water were identified, based on the relative proportions of Ca2+, HCO3, and SO42, to Si. Type A waters are the most solute rich and have the lowest relative proportion of Si. They are believed to form in hydrologically inefficient areas of a distributed drainage system. Most solute is obtained from coupled sulphide oxidation and carbonate dissolution (SO,CD). It is possible that there is a subglacial source of O2, perhaps from gas bubbles released during regelation, because the high SO42, levels found (up to 1200 µeq/L) are greater than could be achieved if sulphides are oxidized by oxygen in saturated water at 0 °C (c.414 µeq/L). A more likely alternative is that sulphide is oxidized by Fe3+ in anoxic environments. If this is the case, exchange reactions involving FeIII and FeII from silicates are possible. These have the potential to generate relatively high concentrations of HCO3, with respect to SO42,. Formation of secondary weathering products, such as clays, may explain the low Si concentrations of Type A waters. Type B waters were the most frequently sampled subglacial water. They are believed to be representative of waters flowing in more efficient parts of a distributed drainage system. Residence time and reaction kinetics help determine the solute composition of these waters. The initial water,rock reactions are carbonate and silicate hydrolysis, and there is exchange of divalent cations from solution for monovalent cations held on surface exchange sites. Hydrolysis is followed by SO,CD. The SO42, concentrations usually are <414 µeq/L, although some range up to 580 µeq/L, which suggests that elements of the distributed drainage system may become anoxic. Type C waters were the most dilute, yet they were very turbid. Their chemical composition is characterized by low SO42, : HCO3, ratios and high pH. Type C waters were usually artefacts of the borehole chemical weathering environment. True Type C waters are believed to flow through sulphide-poor basal debris, particularly in the channel marginal zone. The composition of bulk runoff was most similar to diluted Type B waters at high discharge, and was similar to a mixture of Type B and C waters at lower discharge. These observations suggest that some supraglacial meltwaters input to the bed are stored temporarily in the channel marginal zone during rising discharge and are released during declining flow. Little of the subglacial chemical weathering we infer is associated with the sequestration of atmospheric CO2. The progression of reactions is from carbonate and silicate hydrolysis, through sulphide oxidation by first oxygen and then FeIII, which drives further carbonate and silicate weathering. A crude estimate of the ratio of carbonate to silicate weathering following hydrolysis is 4 : 1. We speculate that microbial oxidation of organic carbon also may occur. Both sulphide oxidation and microbial oxidation of organic carbon are likely to drive the bed towards suboxic conditions. Hence, we believe that subglacial chemical weathering does not sequester significant quantities of atmospheric CO2 and that one of the key controls on the rate and magnitude of solute acquisition is microbial activity, which catalyses the reduction of FeIII and the oxidation of FeS2. Copyright © 2002 John Wiley & Sons, Ltd. [source] Association of HPV16 E6 variants with diagnostic severity in cervical cytology samples of 354 women in a US populationINTERNATIONAL JOURNAL OF CANCER, Issue 11 2009Rosemary E. Zuna Abstract It has been suggested that DNA sequence variants of HPV16 contribute to differences in the behavior of individual cervical lesions. To address this question, we have analyzed the association of HPV16 variants with diagnostic severity in 354 HPV16-positive Oklahoman women. HPV16 variant status was determined by PCR amplification and DNA sequencing of the E6 open reading frame. European sequences were identified in 86% of samples and 14% were non-European. Of the 51 non-European cases, 61% were Asian-American, 23% African and 16% were Native American variants. European prototype and related variants were present in comparable numbers (43% each) but the relative proportion of each differed with diagnostic category. In general, the proportion of European variants and non-European variants increased with diagnostic severity while the European prototype decreased. When adjusted for age and race (white, black or Hispanic), the increased risk for carcinoma/severe dysplasia for non-European variants was statistically significant with an odds ratio of 3.8 (1.3,10.7). However, the analogous comparison for the European variants, although also showing increased association with carcinoma/severe dysplasia, did not reach statistical significance (OR = 1.6 (95% CI 0.7,3.6). Overall, HPV16 European sequences (both prototype and related variants), were predominant in Oklahoman women including those with cancers. This suggests that while there appear to be differences among the HPV16-variant categories in risk for progression to invasive cancer, all variant categories are associated with the development of invasive cancer. © 2009 UICC [source] Colony growth responses of the Caribbean octocoral, Pseudopterogorgia elisabethae, to harvestingINVERTEBRATE BIOLOGY, Issue 4 2003John Castanaro Abstract. Colonies of the branching Caribbean gorgonian Pseudopterogorgia elisabethae were subjected to partial mortality at 2 sites in the Bahamas to study how colony growth responds to disturbances such as harvesting, grazing, and storm damage. Colonies were clipped so that either 4 branches or 10 branches remained. Growth rates of branches were then monitored over 1 year and compared with nearby unclipped colonies. No significant differences were found between branch extension rates among the 3 treatments. Extension rates of newly formed branches were significantly greater in all treatments than among branches present at the start of the experiment. Per capita branching rates were greater on the more severely clipped colonies and were smallest on control colonies. The absolute number of branches that became mother branches did not differ among treatments. Colonies clipped so that 4 and 10 branches remained had the same average number of mother branches per colony, and there was no significant difference between treatments in the average number of new branches formed on the colonies. Per capita branching rates were significantly different among treatments only because the relative proportion of branches that became mother branches was higher in colonies with four branches than in treatments with more initial branches. Total growth (cumulative growth on all branches) was not significantly different between the 2 clipped treatments. Many of the control colonies suffered extensive damage, which may have obscured the comparison of clipped and unclipped treatments; however, within the range of these clipping treatments, differing levels of partial mortality did not lead to different recovery rates. The lack of treatment effects is particularly relevant to assessing the effects of harvest techniques on the recovery and productivity of harvested, naturally occurring, colonies. [source] The influence of management regime and altitude on the population structure of Succisapratensis: implications for vegetation monitoringJOURNAL OF APPLIED ECOLOGY, Issue 4 2001Christoph Bühler Summary 1,Environmental change and land use may alter the vegetation typical of wetland habitats. However, commonly used techniques for vegetation monitoring that are based on species composition are often not suitable to detect gradual changes in the structure of vegetation at an early stage. In this study we tested if this methodical deficiency could be overcome by observation of the stage structure of a perennial target species. 2,We studied the density and frequency distribution of four phenological stages of the perennial plant Succisapratensis in 24 calcareous fens in eastern Switzerland. These fens differed in management type (mowing, cattle-grazing) and altitude (low, medium, high). Among grazed fens, the intensity of management was quantified by direct observation. Species composition and canopy structure of the plant community surrounding S. pratensis were also measured. 3,High altitude had a positive effect on the density of adult plants of S. pratensis only in mown fens, whereas in grazed fens adult density was highest at medium altitude. 4,Local densities of seedlings and vegetative adults within a fen were higher in mown than in grazed fens, and lower in fens of the lowest altitude level than of the two higher ones. However, there were no differences in the relative proportions of all four phenological stages among main factors except that significantly fewer seedlings occurred in fens of the lowest altitude level. 5,It is the intensity rather than the mere type of management regime that is crucial for shaping populations of S. pratensis: for grazed fens, there is a negative relationship between intensity of grazing and density of adult plants of S. pratensis. Moreover, the number, the relative proportion of seedlings and the seed-set are all negatively correlated with grazing intensity. 6,The species composition of the plant community, but not its physical structure, was significantly related to the relative proportion of seedlings of S. pratensis, which supports the indicator qualities of the target species. 7,Monitoring the population structure of one or several target species provides important indicator information about the stability of a whole plant community. For the target-species approach we propose to use characteristic but frequently and steadily occurring species instead of rare or endangered ones. [source] Lignin-based polycondensation resins for wood adhesivesJOURNAL OF APPLIED POLYMER SCIENCE, Issue 3 2007N.-E. El Mansouri Abstract Lignin-based wood adhesives are obtained that satisfy the requirements of relevant international standards for the manufacture of exterior-grade wood particleboard. Formulations based on low molecular mass lignin and presenting an increase in the relative proportion of reactive points yield better results than the higher molecular mass lignin used in the past. These lignins allow a higher proportion of hydroxymethylation during preparation of methylolated lignins. These lignin-based adhesives also yield acceptable results at particleboard pressing times that are sufficiently low to be of industrial significance. Lignin-based wood adhesives, in which a nonvolatile nontoxic aldehyde (glyoxal) is substituted for formaldehyde in their preparation, are prepared and tested for application to wood panels such as particleboard. The adhesives yield good internal bond strength results for the panels, which are good enough to comfortably pass relevant international standard specifications for exterior-grade panels. The adhesives also show sufficient reactivity to yield panels in press times comparable to that of formaldehyde-based commercial adhesives. © 2006 Wiley Periodicals, Inc. J Appl Polym Sci 103: 1690,1699, 2007 [source] Lipase-catalyzed production of biodiesel from rice bran oilJOURNAL OF CHEMICAL TECHNOLOGY & BIOTECHNOLOGY, Issue 3 2005Chao-Chin Lai Abstract Biodiesel has attracted considerable attention as an alternative fuel during the past decades. The main hurdle to the commercialization of biodiesel is the cost of the raw material. Use of an inexpensive raw material such as rice bran oil is an attractive option to lower the cost of biodiesel. Two commercially available immobilized lipases, Novozym 435 and IM 60, were employed as catalyst for the reaction of rice bran oil and methanol. Novozym 435 was found to be more effective in catalyzing the methanolysis of rice bran oil. Methanolysis of refined rice bran oil and fatty acids (derived from rice bran oil) catalyzed by Novozym 435 (5% based on oil weight) can reach a conversion of over 98% in 6 h and 1 h, respectively. Methanolysis of rice bran oil with a free fatty acid content higher than 18% resulted in lower conversions (<68%). A two-step lipase-catalyzed methanolysis of rice bran oil was developed for the efficient conversion of both free fatty acid and acylglycerides into fatty acid methyl ester. More than 98% conversion can be obtained in 4,6 h depending on the relative proportion of free fatty acid and acylglycerides in the rice bran oil. Inactivation of lipase by phospholipids and other minor components was observed during the methanolysis of crude rice bran oil. Simultaneous dewaxing/degumming proved to be efficient in removing phospholipids and other minor components that inhibit lipase activity from crude rice bran oil. Copyright © 2005 Society of Chemical Industry [source] Performance of a Proposed Method for the Linking of Mixed Format Tests With Constructed Response and Multiple Choice ItemsJOURNAL OF EDUCATIONAL MEASUREMENT, Issue 4 2000Richard Tate The error associated with a proposed linking method for tests consisting of both constructed response and multiple choice items was investigated in a simulation study. Study factors that were varied included the relative proportion of constructed response items in the test, the size of the year-to-year change in the ability metric, the number of anchor items, the number of linking papers to be reassessed, and the presence of guessing. The results supported the use of the proposed linking method, In addition, simulations were used to illustrate possible linking bias resulting from (a) the use of the traditional linking method and (b) the use of only multiple choice anchor items in the presence of test multidimensionality. [source] Alternative migration and host parasitism strategies and their long-term stability in river lampreys from the River Endrick, ScotlandJOURNAL OF FISH BIOLOGY, Issue 10 2008C. E. Adams The stability of a discrete body size dimorphism of sexually mature river lamprey Lampetra fluviatilis from the River Endrick, Scotland, was examined over a 21 year period. Stable isotope analysis was used to test the hypothesis that the two size forms comprise individuals with differing migration and parasitic foraging strategies. Maturing river lamprey and the brook lamprey Lampetra planeri were trapped over 3 months each year in the periods 1983,1984 and 2004,2005. Brook lamprey catches and catches of both species combined showed no significant trend in catch rate with time. The catch rate of small body size river lamprey declined between 1983,1984 and 2004,2005 (although the difference did not reach statistical significance; P = 0·055). In contrast, there was a significant increase in the catch rate of the large body size river lamprey and as a consequence, a significant change in the relative proportion of each of the two river lamprey morphs over the study period. Analysis of the stable isotopes of C and N in muscle tissue showed that brook lamprey tissue derived its carbon from a freshwater source and had a ,13C more consistent with that of the River Endrick than with Loch Lomond. ,15N values for this species showed it to be feeding at the base of the food chain, consistent with filter feeding as an ammocoete. The large body size and the small body size river lamprey adults differed substantially in their ,13C values, with the small body size ,13C signature indicative of a freshwater carbon source and the large body size morph of a marine source. The small body size morph had a ,13C signature that was consistent with that of Loch Lomond powan Coregonus lavaretus suggesting that they share a common carbon source. The large body size morph was clearly feeding at a higher trophic level than the small body size morph. A single small body size river lamprey individual with typical morphology for that group, however, had C and N signatures that clustered with those of the large body size morphs. This individual had either migrated to sea to forage, as is typical for the species, or had been feeding on an anadromous fish with a strong marine C signature in fresh water. It is concluded that the body size dimorphism is indicative of a differential migration and foraging strategy in the parasitic phase of the life cycle of river lamprey at this site. [source] Research into ageing and older peopleJOURNAL OF NURSING MANAGEMENT, Issue 2 2008FIBiol, ROGER WATSON PhD Aim, The aim of this paper is to consider the process of ageing, the effects of ageing and research related to ageing. Background, In most countries of the world, the UK being no exception, the population is ageing in terms of the absolute numbers of and relative proportion of older people. This has resulted from economic, scientific and medical progress. However, it poses challenges for health and social services. Method, Selective review of the literature. Conclusion, Ageing is an inevitable part of life and, while not in itself debilitating, can be accompanied by a range of debilitating physical and mental conditions which lead to frailty and dependency. There is limited evidence that the ageing process can be alleviated, as such, but there is some evidence that choices and circumstances in early life can influence the extent to which we age successfully. Implications for nursing management, Nurse managers have two responsibilities with regard to age: they are increasingly engaged in organizing care for older people in acute and long-term settings and in nursing homes and the more they need to understand the process of ageing. They also have responsibilities towards their workforce and can facilitate lifestyle choices which may help their workforce to age successfully. [source] Extrapolating in vitro metabolic interactions to isolated perfused liver: Predictions of metabolic interactions between R -bufuralol, bunitrolol, and debrisoquineJOURNAL OF PHARMACEUTICAL SCIENCES, Issue 10 2010Sami Haddad Abstract Drug,drug interactions (DDIs) are a great concern to the selection of new drug candidates. While in vitro screening assays for DDI are a routine procedure in preclinical research, their interpretation and relevance for the in vivo situation still represent a major challenge. The objective of the present study was to develop a novel mechanistic modeling approach to quantitatively predict DDI solely based upon in vitro data. The overall strategy consisted of developing a model of the liver with physiological details on three subcompartments: the sinusoidal space, the space of Disse, and the cellular matrix. The substrate and inhibitor concentrations available to the metabolizing enzyme were modeled with respect to time and were used to relate the in vitro inhibition constant (Ki) to the in vivo situation. The development of the liver model was supported by experimental studies in a stepwise fashion: (i) characterizing the interactions between the three selected drugs (R -bufuralol (BUF), bunitrolol (BUN), and debrisoquine (DBQ)) in microsomal incubations, (ii) modeling DDI based on binary mixtures model for all the possible pairs of interactions (BUF,BUN, BUF,DBQ, BUN,DBQ) describing a mutual competitive inhibition between the compounds, (iii) incorporating in the binary mixtures model the related constants determined in vitro for the inhibition, metabolism, transport, and partition coefficients of each compound, and (iv) validating the overall liver model for the prediction of the perfusate kinetics of each drug determined in isolated perfused rat liver (IPRL) for the single and paired compounds. Results from microsomal coincubations showed that competitive inhibition was the mechanism of interactions between all three compounds, as expected since those compounds are all substrates of rat CYP2D2. For each drug, the Ki values estimated were similar to their Km values for CYP2D2 indicative of a competition for the same substrate-binding site. Comparison of the performance between the novel liver physiologically based pharmacokinetic (PBPK) model and published empirical models in simulating the perfusate concentration,time profile was based on the area under the curve (AUC) and the shape of the curve of the perfusate time course. The present liver PBPK model was able to quantitatively predict the metabolic interactions determined during the perfusions of mixtures of BUF,DBQ and BUN,DBQ. However, a lower degree of accuracy was obtained for the mixtures of BUF,BUN, potentially due to some interindividual variability in the relative proportion of CYP2D1 and CYP2D2 isoenzymes, both involved in BUF metabolism. Overall, in this metabolic interaction prediction exercise, the PBPK model clearly showed to be the best predictor of perfusate kinetics compared to more empirical models. The present study demonstrated the potential of the mechanistic liver model to enable predictions of metabolic DDI under in vivo condition solely from in vitro information. © 2010 Wiley-Liss, Inc. and the American Pharmacists Association J Pharm Sci 99:4406,4426, 2010 [source] Dentists' preferences of anterior tooth proportion,a Web-based studyJOURNAL OF PROSTHODONTICS, Issue 3 2000Stephen F. Rosenstiel BDS Purpose This study aimed to determine dentists' esthetic preferences of the maxillary anterior teeth as influenced by different proportions. The goal was to link choices to demographic data as to the experience, gender, and training of the dentist. Materials and Methods Computer-manipulated images of the 6 maxillary anterior teeth were generated from a single image and assigned to 5 tooth-height groups (very short, short, normal height, tall, and very tall). For each group, 4 images were generated by manipulating the relative proportion of the central incisors, lateral incisors, and canines according to the proportions 62% (or "golden proportion"), 70%, 80%, and "normal" or not further altered. The images were randomly ordered on a web page that contained a form asking for demographic data and fields asking for a ranking of the images. Dentists were asked via e-mail to visit the web page and complete the survey. The responses were tabulated and analyzed with repeated measures logistic regression with the alpha at 0.05. A subset of North American respondents was chosen for further analysis. Results A total of 549 valid responses were received and analyzed from dentists in 38 countries. There were statistically significant differences in all groups for the variables of proportion, group (tooth height), and their interaction. The 80% proportion was judged best for the Very Short and Short groups. Three of the choices were almost equally picked for the Normal Height and Tall groups, and the golden proportion was judged best for the Very Tall group. The variables of year of graduation, gender, professional activity, generalist or specialist, or number of patients were not significantly correlated with the choices for the North American respondents. Conclusions Dentists preferred the 80 percent proportion when viewing short or very short teeth and the golden proportion when viewing very tall teeth. Golden proportion was worst for normal height or shorter teeth and the 80% proportion for tall or very tall teeth. They picked no clear-cut best for normal height or tall teeth, and their choices could not be predicted based on gender, specialist training, experience, or patient load. [source] A Work Sampling Study of Provider Activities in School-Based Health CentersJOURNAL OF SCHOOL HEALTH, Issue 6 2009Brian Mavis PhD ABSTRACT Background:, The purpose of this study was to describe provider activities in a convenience sample of School-Based Health Centers (SBHCs). The goal was to determine the relative proportion of time that clinic staff engaged in various patient care and non-patient care activities. Methods:, All provider staff at 4 urban SBHCs participated in this study; 2 were in elementary schools, 1 in a middle school, and 1 in a school with kindergarten through grade 8. The study examined provider activity from 6 days sampled at random from the school year. Participants were asked to document their activities in 15-minute intervals from 8:00 a.m. to 5:00 p.m. A structured recording form was used that included 35 activity categories. Results:, Overall, 1492 records were completed, accounting for 2708 coded activities. Almost half (48%) of all staff activities were coded as direct patient contact, with clinic operations the second largest category. Limited variations in activities were found across clinic sites and according to season. Conclusions:, A significant amount of provider activity was directed at the delivery of health care; direct patient care and clinic operations combined accounted for approximately 75% of clinic activity. Patient, classroom, and group education activities, as well as contacts with parents and school staff accounted for 20% of all clinic activity and represent important SBHC functions that other productivity measures such as billing data might not consistently track. Overall, the method was acceptable to professional staff as a means of tracking activity and was adaptable to meet their needs. [source] Understorey plant and soil responses to disturbance and increased nitrogen in boreal forestsJOURNAL OF VEGETATION SCIENCE, Issue 2 2009O.H. Manninen Abstract Question: How do N fertilization and disturbance affect the understorey vegetation, microbial properties and soil nutrient concentration in boreal forests? Location: Kuusamo (66°22,N; 29°18,E) and Oulu (65°02,N; 25°47,E) in northern Finland. Methods: We conducted a fully factorial experiment with three factors: site (two levels), N fertilization (four levels) and disturbance (two levels). We measured treatment effects on understorey biomass, vegetation structure, and plant, soil and microbial N and C concentrations. Results: The understorey biomass was not affected by fertilization either in the control or in the disturbance treatment. Fertilization reduced the biomass of deciduous Vaccinium myrtillus. Disturbance had a negative effect on the biomass of V. myrtillus and evergreen Vaccinium vitis-idaea and decreased the relative proportion of evergreen species. Fertilization and disturbance increased the biomass of grass Deschampsia flexuosa and the relative proportion of graminoids. The amount of NH4+ increased in soil after fertilization, and microbial C decreased after disturbance. Conclusions: Our results suggest that the growth of slow-growing Vaccinium species and soil microbes in boreal forests are not limited by N availability. However, significant changes in the proportion of dwarf shrubs to graminoids and a decrease in the biomass of V. myrtillus demonstrate the susceptibility of understorey vegetation to N enrichment. N enrichment and disturbance seem to have similar effects on understorey vegetation. Consequently, increasing N does not affect the rate or the direction of recovery after disturbance. Moreover, our study demonstrates the importance of understorey vegetation as a C source for soil microbes in boreal forests. [source] Lacustrine spatial distribution of landlocked Atlantic salmon populations assessed across generations by multilocus individual assignment and mixed-stock analysesMOLECULAR ECOLOGY, Issue 10 2001C. Potvin Abstract The objective of this study was to assess the spatiotemporal distribution of four landlocked Atlantic salmon (Salmo salar) populations during their sympatric feeding phase in lake St-Jean (Québec, Canada). A total of 1100 fish captured over a period of 25 years was genotyped at six microsatellite loci in order to assess the temporal stability of the relative proportion of each population in different lake sectors using both individual-based assignment and mixed-stock analysis. Estimates of relative proportions obtained from both methods were highly correlated. A nonrandom spatial distribution of populations was observed for each period and, despite the fact that the overall proportion of each population varied over time, the pattern of differential distribution remained generally stable over time. Furthermore, there were indications that the extent of horizontal spatial overlap among populations was negatively correlated with that of their genetic differentiation at both microsatellites and a major histocompatibility complex locus, and independent of the geographical distance between the rivers of origin. We discuss the hypothesis that the temporal stability of spatial distribution, the lack of an association between spatial partitioning and geographical distance between rivers of origin, and the apparent negative correlation between spatial overlap and genetic differentiation, reflect the outcome of selective pressures driving behavioural differences for spatial niche partitioning among populations. [source] Distribution of lymphoid neoplasms in the Republic of Korea: Analysis of 5318 cases according to the World Health Organization classification,AMERICAN JOURNAL OF HEMATOLOGY, Issue 10 2010Sun Och Yoon Compared with the West, the overall incidence of lymphoid neoplasms is lower, and the subtype distribution is distinct in Asia. To comprehensively investigate the subtype distribution with the age and sex factors, and temporal changes of subtype proportions, we re-assessed all patients with lymphoid neoplasms diagnosed at a large oncology service in the Republic of Korea from 1989 to 2008 using the World Health Organization classifications. Of the total 5,318 patients, 66.9% had mature B-cell neoplasms, 12.5% had mature T/natural killer (NK)-cell neoplasms, 16.4% had precursor lymphoblastic leukemia/lymphoma (ALL/LBL), and 4.1% had Hodgkin's lymphoma. The most common subtypes were diffuse large B-cell lymphoma (30.5%), plasma cell myeloma (14.0%), extranodal marginal zone lymphoma of mucosa-associated lymphoid tissue type (MALT lymphoma; 12.4%), B-cell ALL/LBL (11.3%), Hodgkin's lymphoma (4.1%), peripheral T-cell lymphoma unspecified (4.0%), T-cell ALL/LBL (3.9%), and extranodal NK/T-cell lymphoma of nasal type (3.9%). Most subtypes showed male predominance, with an average M/F ratio of 1.3. Most mature lymphoid neoplasms were diseases of adults (mean age, 53.5 yr), whereas ALL/LBLs were of young individuals (mean age, 20.3 yr). When the relative proportion of subtypes were compared between two decades (1989,1998 vs. 1999,2008), especially MALT lymphoma has increased in proportion, whereas T/NK-cell neoplasms and ALL/LBL have slightly decreased. In summary, the lymphoid neoplasms of Koreans shared some epidemiologic features similar to those of other countries, whereas some subtypes showed distinct features. Although the increase in incidence of lymphoid neoplasms is relatively modest in Korea, recent increase of MALT lymphoma and decrease of T/NK-cell neoplasms and ALL/LBL are interesting findings. Am. J. Hematol., 2010. © 2010 Wiley-Liss, Inc. [source] Mixture and mixture,process variable experiments for pharmaceutical applicationsPHARMACEUTICAL STATISTICS: THE JOURNAL OF APPLIED STATISTICS IN THE PHARMACEUTICAL INDUSTRY, Issue 4 2004Christine M. Anderson-Cook Abstract Many experiments in research and development in the pharmaceutical industry involve mixture components. These are experiments in which the experimental factors are the ingredients of a mixture and the response variable is a function of the relative proportion of each ingredient, not its absolute amount. Thus the mixture ingredients cannot be varied independently. A common variation of the mixture experiment occurs when there are also one or more process factors that can be varied independently of each other and of the mixture components, leading to a mixture,process variable experiment. We discuss the design and analysis of these types of experiments, using tablet formulation as an example. Our objective is to encourage greater utilization of these techniques in pharmaceutical research and development. Copyright © 2004 John Wiley & Sons Ltd. [source] Comparing data mining methods on the VAERS database,PHARMACOEPIDEMIOLOGY AND DRUG SAFETY, Issue 9 2005David Banks PhD Abstract Purpose Data mining may enhance traditional surveillance of vaccine adverse events by identifying events that are reported more commonly after administering one vaccine than other vaccines. Data mining methods find signals as the proportion of times a condition or group of conditions is reported soon after the administration of a vaccine; thus it is a relative proportion compared across vaccines, and not an absolute rate for the condition. The Vaccine Adverse Event Reporting System (VAERS) contains approximately 150,000 reports of adverse events that are possibly associated with vaccine administration. Methods We studied four data mining techniques: empirical Bayes geometric mean (EBGM), lower-bound of the EBGM's 90% confidence interval (EB05), proportional reporting ratio (PRR), and screened PRR (SPRR). We applied these to the VAERS database and compared the agreement among methods and other performance properties, particularly focusing on the vaccine,event combinations with the highest numerical scores in the various methods. Results The vaccine,event combinations with the highest numerical scores varied substantially among the methods. Not all combinations representing known associations appeared in the top 100 vaccine,event pairs for all methods. Conclusions The four methods differ in their ranking of vaccine,COSTART pairs. A given method may be superior in certain situations but inferior in others. This paper examines the statistical relationships among the four estimators. Determining which method is best for public health will require additional analysis that focuses on the true alarm and false alarm rates using known vaccine,event associations. Evaluating the properties of these data mining methods will help determine the value of such methods in vaccine safety surveillance. Copyright © 2005 John Wiley & Sons, Ltd. [source] An acoustic emission study on the fracture behavior of continuous glass fiber/polypropylene composites based on commingled yarnPOLYMER COMPOSITES, Issue 7 2008Yantao Wang The fracture behavior of continuous glass fiber reinforced polypropylene composites made of commingled yarn in the form of biaxial (±±45°) noncrimp warp-knitted fabric, twill woven fabric, and swirl mat, respectively, was investigated by virtue of single edge notched tensile (SEN-T) specimens. These composite laminates were manufactured by compression molding and cooled at two different rates (1°C/min and 10°C/min) during the last processing phase of the laminates. The failure mechanisms were studied by acoustic emission (AE) analysis. AE amplitude ranges corresponding to the individual failure modes have been identified. For biaxial noncrimp fabric reinforced materials, the failure mechanisms involved in the fracture procedure are governed by the interface related failure events. Higher cooling rate, which is accompanied by better fiber/matrix adhesion, results in not only the increase in the relative proportion of high-amplitude failure events, but also the occurrence of a large quantity of fiber fracture events. For woven fabric and mat reinforced composites, fiber-dominated failure mechanisms result in the higher fracture toughness when compared with biaxial noncrimp fabric composites. Under this circumstance, the change in cooling rate only results in the difference in the relative frequency of the individual failure modes. In addition, it is found out that the initiation fracture toughness of SEN-T specimens can be easily assessed by marking the load value which corresponds to the first point of AE signals emitted stably in AE events-displacement curves. POLYM. COMPOS., 2008. © 2008 Society of Plastics Engineers [source] Aging of the nigrostriatal system in the squirrel monkeyTHE JOURNAL OF COMPARATIVE NEUROLOGY, Issue 4 2004Alison L. McCormack Abstract Increasing incidence of Parkinson's disease with advancing age suggests that age-related processes predispose the nigrostriatal dopaminergic system to neurodegeneration. Several hypotheses concerning the effects of aging on nigrostriatal neurons were assessed in this study using a non-human primate model. First, we examined the possibility that the total number of dopaminergic neurons decline in the substantia nigra as a function of age. Stereological counting based on both tyrosine hydroxylase immunoreactivity (TH-ir) and neuromelanin (NM) content revealed no difference in cell number between young, middle-aged and old squirrel monkeys. We then determined whether advancing age changed the relative proportion of neurons characterized by 1) TH-ir in the absence of NM, 2) the presence of both TH-ir and NM, or 3) NM without TH-ir. Indeed, a progressive age-related depletion of TH only cells was paralleled by an increase in NM only neurons. The possibility that these changes could underlie a functional impairment of the nigrostriatal system was supported by striatal dopamine measurements showing a decrease in older monkeys. Finally, we tested the hypotheses that aging may enhance cell vulnerability to injury and that different dopaminergic subpopulations display varying degrees of susceptibility. When monkeys were exposed to the neurotoxicant 1-methyl-4-phenyl-1,2,3,6-tetrahydropyridine, cell loss was markedly more pronounced in older animals, and the ranking of vulnerability was TH only < TH/NM < NM only cells. The data indicate that, even in the absence of an overall neuronal loss, changes in the characteristics of dopaminergic cells reflect functional deficits and increased vulnerability to injury with age. NM content appears to be an important marker of these age-related effects. J. Comp. Neurol. 471:387,395, 2004. © 2004 Wiley-Liss, Inc. [source] Position and Histological Structure of the Testes in the Brown Hare (Lepus europaeus) during Seasonal Regression and RecrudescenceANATOMIA, HISTOLOGIA, EMBRYOLOGIA, Issue 2 2000B. Simeunovi The position and histological structure of the testes of 33 brown hares (Lepus europaeus) were studied from July to December. From July to September, the testes were located in the scrotum; in October and November, in some animals, the testes were positioned more or less in the inguinal canal towards the abdominal cavity, and in December none of the investigated animals had testes located in the scrotum. Testes were weighed and a quantitative analysis of tissue components was performed: the diameter of the seminiferous tubules, the depth of the seminiferous epithelium, the thickness of the tunica albuginea, the thickness of the peritubular tissue and the relative proportion of seminiferous tubules were determined. The tunica albuginea and peritubular tissue were thickest in September, October and at the beginning of November. In the same months the testis weight was low, and the diameter of the seminiferous tubules, the depth of the seminiferous epithelium and the relative proportion of seminiferous tubules in the testis tissue were significantly lower than in other months. We did not find any correlation between testicular regression or testis weight reduction and the change in the position of the testes. During recrudescence of spermatogenesis in November and December the testes were located in the inguinal canal. [source] | ||||||||||||||||||||||||||||||||||||||||||||||