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Terms modified by R0 Selected AbstractsOxford experience with neoadjuvant chemotherapy and surgical resection for esophageal adenocarcinomas and squamous cell tumorsDISEASES OF THE ESOPHAGUS, Issue 3 2008P. M. Safranek SUMMARY., The Medical Research Council trial for oesophageal cancer (OEO2) trial demonstrated a clear survival benefit from neoadjuvant chemotherapy in resectable esophageal carcinoma. Since February 2000 it has been our practice to offer this chemotherapy regime to patients with T2 and T3 or T1N1 tumors. We analyzed prospectively collected data of patients who received neoadjuvant chemotherapy prior to esophageal resection under the care of a single surgeon. Complications of treatment and overall outcomes were evaluated. A total of 194 patients had cisplatin and 5-fluorouracil prior to esophageal resection. Six patients (5.7%) had progressive disease and were inoperable (discovered in four at surgery). During chemotherapy one patient died and one perforated (operated immediately). Complications including severe neutropenia, coronary artery spasm, renal impairment and pulmonary edema led to the premature cessation of chemotherapy in 12 patients (6.2%). A total of 182 patients with a median age of 63 (range 30,80), 41 squamous and 141 adenocarcinomas underwent surgery. Operations were 91 left thoracoabdominal (50%), 45 radical transhiatal (25%), 40 Ivor-Lewis (22%) and six stage three (3%), and 78.6% had microscopically complete (R0) resections. Median survival was 28 months with 77.3% surviving for 1 year and 57.7% for 2 year. In hospital mortality was 5.5% and anastomotic leak rate 7.7%. A radical surgical approach to the primary tumor in combination with OEO2 neoadjuvant chemotherapy has led to a high R0 resection rate and good survival with acceptable morbidity and mortality. [source] A simple persistence condition for structured populationsECOLOGY LETTERS, Issue 7 2006Alan Hastings Abstract The fundamental question in both basic and applied population biology of whether a species will increase in numbers is often investigated by finding the population growth rate as the largest eigenvalue of a deterministic matrix model. For a population classified only by age, and not stage or size, a simpler biologically interpretable condition can be used, namely whether R0, the mean number of offspring per newborn, is greater than one. However, for the many populations not easily described using only age classes, stage-structured models must be used for which there is currently no quantity like R0. We determine analogous quantities that must be greater than one for persistence of a general structured population model that have a similar useful biological interpretation. Our approach can be used immediately to determine the magnitude of changes and interactions that would either allow population persistence or would ensure control of an undesirable species. [source] Duelling timescales of host movement and disease recovery determine invasion of disease in structured populationsECOLOGY LETTERS, Issue 6 2005Paul C. Cross Abstract The epidemic potential of a disease is traditionally assessed using the basic reproductive number, R0. However, in populations with social or spatial structure a chronic disease is more likely to invade than an acute disease with the same R0, because it persists longer within each group and allows for more host movement between groups. Acute diseases ,perceive' a more structured host population, and it is more important to consider host population structure in analyses of these diseases. The probability of a pandemic does not arise independently from characteristics of either the host or disease, but rather from the interaction of host movement and disease recovery timescales. The R* statistic, a group-level equivalent of R0, is a better indicator of disease invasion in structured populations than the individual-level R0. [source] Life table and heat tolerance of Acyrthosiphon pisum (Hemiptera: Aphididae) in subtropical TaiwanENTOMOLOGICAL SCIENCE, Issue 3 2008Wei-Nung LU Abstract The effect of temperature on the life table of Acyrthosiphon pisum reared on Pisum sativum was evaluated under laboratory conditions using temperatures of 10, 15, 20, 25, 30, and 35°C. The development time of juvenile A. pisum decreased with increasing temperature (from 21.3 days at 10°C to 4.7 days at 35°C). Adult longevity also decreased with increasing temperature (from 53.2 days at 10°C to 2.3 days at 35°C). Interestingly, 70% and 25% of A. pisum nymphs reared at 30°C and 35°C, respectively, successfully developed into adults. These temperatures have previously been considered unsuitable for A. pisum development. However, adult aphids reared at 30°C and 35°C failed to reproduce. Linear regression analysis revealed that the lower development threshold of A. pisum was 153.1 degree-days above 1.9°C. Maximal average reproductive capability was observed at 10°C for A. pisum adults, with each adult producing more than 120 nymphs. The intrinsic rate of increase (rm) of A. pisum increased from 0.124/day at 10°C to 0.337/day at 25°C, whereas opposite trends were observed for the net reproductive rate (R0) and the mean generation time (GT). At 20°C and 25°C, the intrinsic rate of increase of A. pisum was significantly higher than at 10°C and 15°C (P < 0.0001), indicating that 20°C and 25°C are within the optimal range for the growth of A. pisum, and that 30°C is beyond the upper threshold limit for reproduction, which involves a temperature range that is narrower than that of the survival range (upper limit is unknown, but above 35°C). [source] Growth and reproduction of three cladoceran species from a small wetland in the south-eastern U.S.A.FRESHWATER BIOLOGY, Issue 4 2003A. M. Lemke SUMMARY 1.,Growth, reproduction and life-history parameters were measured for three cladoceran species from a small south-eastern wetland, U.S.A. Simocephalus serrulatus, Diaphanosoma brachyurum and Scapholeberis mucronata juveniles were reared at temperatures between 10 and 25 °C on natural food resources. 2.,Growth rate increased with temperature and decreased with individual size for all three species. Maximum somatic growth rate was higher for Simocephalus (49,72% day,1) and Diaphanosoma (21,91% day,1) than for Scapholeberis (11,45% day,1). Multiple regression equations were developed which predict temperature- and mass-specific growth rates for each species. 3.,Scapholeberis egg production was positively related to temperature; however, maximum egg production occurred at intermediate temperatures for Simocephalus and Diaphanosoma. Mean cumulative egg production was higher for Scapholeberis (28,92 eggs per female) than for Simocephalus (18,25 eggs per female) and Diaphanosoma (1,41 eggs per female), and was related to differences in reproductive strategy and survival. 4.,Survival was inversely related to temperature in most cases. For all three cladocerans, the intrinsic rate of increase (r) and net reproductive rate (R0) increased with temperature, whereas generation time (G) decreased. Greater egg production by Scapholeberis compared with the other two cladocerans was consistent with higher R0 values for Scapholeberis at any given temperature. Although r was very similar among species, G was typically longer for Scapholeberis than for Simocephalus and Diaphanosoma. 5.,This analysis provides basic information about the population parameters of these coexisting wetland species, and the growth rate models can be applied to field data to determine production dynamics. [source] Estimates of CO2 uptake and release among European forests based on eddy covariance dataGLOBAL CHANGE BIOLOGY, Issue 9 2004Albert I. J. M. Van Dijk Abstract The net ecosystem exchange (NEE) of forests represents the balance of gross primary productivity (GPP) and respiration (R). Methods to estimate these two components from eddy covariance flux measurements are usually based on a functional relationship between respiration and temperature that is calibrated for night-time (respiration) fluxes and subsequently extrapolated using daytime temperature measurements. However, respiration fluxes originate from different parts of the ecosystem, each of which experiences its own course of temperature. Moreover, if the temperature,respiration function is fitted to combined data from different stages of biological development or seasons, a spurious temperature effect may be included that will lead to overestimation of the direct effect of temperature and therefore to overestimates of daytime respiration. We used the EUROFLUX eddy covariance data set for 15 European forests and pooled data per site, month and for conditions of low and sufficient soil moisture, respectively. We found that using air temperature (measured above the canopy) rather than soil temperature (measured 5 cm below the surface) yielded the most reliable and consistent exponential (Q10) temperature,respiration relationship. A fundamental difference in air temperature-based Q10 values for different sites, times of year or soil moisture conditions could not be established; all were in the range 1.6,2.5. However, base respiration (R0, i.e. respiration rate scaled to 0°C) did vary significantly among sites and over the course of the year, with increased base respiration rates during the growing season. We used the overall mean Q10 of 2.0 to estimate annual GPP and R. Testing suggested that the uncertainty in total GPP and R associated with the method of separation was generally well within 15%. For the sites investigated, we found a positive relationship between GPP and R, indicating that there is a latitudinal trend in NEE because the absolute decrease in GPP towards the pole is greater than in R. [source] Validation of a prediction rule to maximize curative (R0) resection of early-stage pancreatic adenocarcinomaHPB, Issue 7 2009Philip Bao Abstract Background:, The surgeon's contribution to patients with localized pancreatic adenocarcinoma (PAC) is a margin negative (R0) resection. We hypothesized that a prediction rule based on pre-operative imaging would maximize the R0 resection rate while reducing non-therapeutic intervention. Methods:, The prediction rule was developed using computed tomography (CT) and endoscopic ultrasound (EUS) data from 65 patients with biopsy-proven PAC who underwent attempted resection. The rule classified patients as low or high risk for non-R0 outcome and was validated in 78 subsequent patients. Results:, Model variables were: any evidence of vascular involvement on CT; EUS stage and EUS size dichotomized at 2.6 cm. In the validation cohort, 77% underwent resection and 58% achieved R0 status. If only patients in the low-risk group underwent surgery, the prediction rule would have increased the resection rate to 92% and the R0 rate to 73%. The R0 rate was 40% higher in low-risk compared with high-risk patients (P < 0.001). High risk was associated with a 67% rate of non-curative surgery (unresectable disease and metastases). Conclusion:, The prediction rule identified patients most likely to benefit from resection for PAC using pre-operative CT and EUS findings. Model predictions would have increased the R0 rate and reduced non-therapeutic interventions. [source] Practical questions in liver metastases of colorectal cancer: general principles of treatmentHPB, Issue 4 2007Héctor Daniel González Abstract Liver metastases of colorectal cancer are currently treated by multidisciplinary teams using strategies that combine chemotherapy, surgery and ablative techniques. Many patients classically considered non-resectable can now be rescued by neoadjuvant chemotherapy followed by liver resection, with similar results to those obtained in initial resections. While many of those patients will recur, repeat resection is a feasible and safe approach if the recurrence is confined to the liver. Several factors that until recently were considered contraindications are now recognized only as adverse prognostic factors and no longer as contraindications for surgery. The current evaluation process to select patients for surgery is no longer focused on what is to be removed but rather on what will remain. The single most important objective is to achieve a complete (R0) resection within the limits of safety in terms of quantity and quality of the remaining liver. An increasing number of patients with synchronous liver metastases are treated by simultaneous resection of the primary and the liver metastatic tumours. Multilobar disease can also be approached by staged procedures that combine neoadjuvant chemotherapy, limited resections in one lobe, embolization or ligation of the contralateral portal vein and a major resection in a second procedure. Extrahepatic disease is no longer a contraindication for surgery provided that an R0 resection can be achieved. A reverse surgical staged approach (liver metastases first, primary second) is another strategy that has appeared recently. Provided that a careful selection is made, elderly patients can also benefit from surgical treatment of liver metastases. [source] EFFECTS OF TEMPERATURE ON CERTAIN POPULATION PARAMETERS OF LIRIOMYZA SATIVAE BLAN-CHARD (DIPTERA: AGROMYZIDAE)INSECT SCIENCE, Issue 2 2000ZHANG Run-jie Abstract, Effects of temperature on population parameters and the intrinsic rate of natural increase of the leafminer, Liriomyza sativae Blanchard, were studied at constant temperatures, 15, 20, 25, 30 and 3593 80% RH and a photoperiod of 12:12 (L:D) in the laboratory with Phaseolus vulgaris as the host plant. Developmental time of the immature stage decreased from 38 d at 15C to lld at 3593 Regression equations relating temperature (t) to development rates (y) for egg, larval and pupal stages, were y = 1.7862t - 13.841, y = 1.162t - 4.946 and y= 0.634t - 5.146, respectively. Longevity of female adult decreased from 20 d at 15°C to 9 d with temperature up to 35C The most favorable temperature range for reproduction was 20°C - 30oC in which the fecundity ranged from 158 to 282 eggs per female. The lowest total mortality was 9% at 25oC and the highest was 49% at 35 93 High intrinsic rate of natural increase (rm) was 0.27 and high net reproductive rate (R0) was 116.8 at temperature range between 25 t and 30 t indicating that this range was optimal for population growth and that population density might increase 117 times per generation under this temperature condition. Mean generation time (T) and time for population to double (t) decreased as temperature increased, showing a negative linear trend with temperature. The relationship between finite rate of increase (A) and temperature, however, was a positive linear regression. [source] The thymidylate synthase tandem repeat promoter polymorphism: A predictor for tumor-related survival in neoadjuvant treated locally advanced gastric cancerINTERNATIONAL JOURNAL OF CANCER, Issue 12 2006Katja Ott Abstract We evaluated DNA polymorphisms in the thymidylate synthase (TS) and 5,10- methylene-tetrahydrofolate reductase (MTHFR) genes for an association with response and survival in locally advanced gastric cancer treated with 5-FU based preoperative chemotherapy (CTx). DNA of 238 patients (CTx-group: total n = 135, completely resected (R0) n = 102; without CTx: R0 n = 103) was isolated from blood or from nontumorous tissues. In the CTx-group, genotyping of the tandem repeat and the G/C polymorphism in the triple repeat in the promoter region of the TS gene and of the C677T polymorphism of the MTHFR gene was performed. None of the TS or MTHFR genotypes were associated with histopathological response and only the TS tandem repeat polymorphism was significantly related to survival (all patients n = 135, p = 0.002; R0 resected patients n = 102, p = 0.007; log-rank test). Multivariate analysis revealed ypN (p < 0.001) and the TS tandem repeat polymorphism as independent prognostic factors in the CTx-R0-group (p = 0.003). Analyzing the prognostic significance of the TS polymorphisms in the R0-group without CTx, TS genotypes were not significantly associated with survival. Comparing survival between R0 patients with and without CTx in the respective TS genotype groups of the tandem repeat polymorphism, a significant survival benefit for the patients with CTx was found for the 2rpt/2rpt (n = 49; p = 0.002) and 2rpt/3rpt genotypes (n = 99; p = 0.004), but not for the 3rpt/3rpt genotype (n = 57; p = 0.93). Patients' survival after CTx was associated with the TS tandem repeat polymorphism. CTx did not improve survival of patients with the 3rpt/3rpt genotype. Thus, a different therapy might be more appropriate for these patients. © 2006 Wiley-Liss, Inc. [source] Prognostic impact of hematogenous tumor cell dissemination in patients with stage II colorectal cancerINTERNATIONAL JOURNAL OF CANCER, Issue 12 2006Moritz Koch Abstract Adjuvant chemotherapy is not routinely recommended in patients with colorectal cancer stage UICC II. Some of these patients, however, develop recurrent disease. Therefore, valid prognostic criteria are needed to identify high-risk patients who might benefit from adjuvant therapy. Disseminated tumor cells, detected in blood and bone marrow, may prove to be a valid marker, however, the prognostic relevance of these cells remains debated. In our study, we examined the prognostic significance of disseminated tumor cells in blood and bone marrow of patients with stage II colorectal cancer. Ninety patients with potentially curative (R0) resection of colorectal cancer stage II were prospectively enrolled into the study. Bone marrow and blood samples were examined for disseminated tumor cells by CK 20 RT-PCR. Patient, tumor and treatment factors were analyzed as prognostic factors. Multivariate analysis confirmed tumor cell detection in blood (hazard ratio 2.1, p = 0.03) and T-category (hazard ratio 2.2, p = 0.02) to be independent prognostic factors for relapse-free survival. Tumor cell detection in postoperative blood samples (hazard ratio 7.7, p < 0.001) and number of removed lymph nodes (hazard ratio 6.4, p < 0.001) were independent prognostic factors for disease-specific survival. Detection of circulating tumor cells in blood samples of patients with stage II colorectal cancer identifies patients with poor outcome. This finding should be confirmed by further studies and could then be used as a basis for conducting a randomized trial evaluating the effect of adjuvant chemotherapy in stage II patients. © 2006 Wiley-Liss, Inc. [source] An optimized kinetics model for OH chemiluminescence at high temperatures and atmospheric pressuresINTERNATIONAL JOURNAL OF CHEMICAL KINETICS, Issue 12 2006Joel M. Hall Chemiluminescence from the OH(A , X) transition near 307 nm is a commonly used diagnostic in combustion applications such as flame chemistry, shock-tube experiments, and reacting-flow visualization. Although absolute measurements of OH(X) concentrations are well defined, there is no elementary relation between emission from the electronically excited state (OH*) and its absolute concentration. Thus, to enable quantitative emission measurements, a kinetics model has been assembled and optimized to predict OH* formation and quenching at combustion conditions. Shock-tube experiments were conducted in mixtures of H2/O2/Ar, CH4/O2/Ar, and CH4/H2/O2/Ar with high levels of argon dilution (>98%). Elementary reactions to model OH*, along with initial estimates of their rate coefficients, were taken from the literature. The important formation steps follow: (R0) (R1) Sensitivity analyses were performed to identify experimental conditions under which the shape of the measured OH* profiles and the magnitude of the OH* emission would be sensitive to the formation reactions. A fitting routine was developed to express the formation rate parameters as a function of a single rate, k1 at the reference temperature (1490 K). With all rates so expressed, H2/CH4 mixtures were designed to uniquely determine the value of k1 at the reference temperature, from which the remaining rate parameters were calculated. Quenching rates were fixed at their literature values. The new model predicts the experimental data over the range of conditions studied and can be used to calibrate the emission diagnostic for other applications, such as measurements in real combustion environments, containing higher order hydrocarbon fuels and lower levels of dilution in air. © 2006 Wiley Periodicals, Inc. Int J Chem Kinet 38: 714,724, 2006 [source] A simple mechanism for stabilizing network queues in TCP/IP networksINTERNATIONAL JOURNAL OF NETWORK MANAGEMENT, Issue 4 2007James Aweya In this paper we determine the stability bounds for the DRED active queue management (AQM) algorithm using a previously developed nonlinear dynamic model of TCP. We develop a second-order linear model with time delay by linearizing the nonlinear model. Using the Pade approximation of time-delayed system e,R0s, where R0 is the delay in the system, we then determine the range of stabilizing gains of DRED when controlling the second-order system with time delay R0. We also present examples showing the stability bounds of the DRED controller gain for networks with different parameters such as link capacity, load level, and round-trip time. In addition, we describe an efficient implementation of the DRED AQM algorithm. Copyright © 2006 John Wiley & Sons, Ltd. [source] Development of analytic energy gradient method in nuclear orbital plus molecular orbital theoryINTERNATIONAL JOURNAL OF QUANTUM CHEMISTRY, Issue 14 2007Minoru Hoshino Abstract This study formulates the analytic energy gradients in the Hartree-Fock calculations of the NOMO theory, which simultaneously determines nuclear and electronic wave functions without the Born-Oppenheimer approximation. The formulations correspond to the translation- and rotation-contaminated (TRC), translation-free (TF), and translation- and rotation-free (TRF) treatments. The optimizations of the orbital centers for several diatomic molecules, which have been performed by using the analytic energy gradients, have given the averaged nuclear distances {R0} reflecting the quantum effects of nuclei and the anharmonicity of the potential energy surfaces. The numerical assessments have clarified that the effects of eliminating the translational and rotational contaminations, i.e., the TRF effects are important to improve the evaluations of {R0}, especially for the molecules including hydrogen atoms. © 2007 Wiley Periodicals, Inc. Int J Quantum Chem, 2007 [source] Extreme multielectron ionization of elemental clusters in ultraintense laser fieldsISRAEL JOURNAL OF CHEMISTRY, Issue 2 2007Andreas Heidenreich In this paper we present computational and theoretical studies of extreme multielectron ionization in Xen clusters (n = 55-2171, initial cluster radii R0 = 8.7-31.0 Å) driven by ultraintense Gaussian infrared laser fields (peak intensity IM = 1015 -1020 W cm,2, temporal pulse length , = 10-100 fs, and frequency v = 0.35fs,1). The microscopic approach, which rests on three sequential-parallel processes of inner ionization, nanoplasma formation, and outer ionization, properly describes the high ionization levels (with the formation of {Xeq+}n with q = 5-36), the inner/outer cluster ionization mechanisms, and the nanoplasma response. The cluster size and laser intensity dependence of the inner ionization levels are determined by a complex superposition of laser-induced barrier suppression ionization (BSI), with the contributions of the inner field BSI manifesting ignition enhancement and screening retardation effects, together with electron impact ionization. The positively charged nanoplasma produced by inner ionization reveals intensity-dependent spatial inhomogeneity and spatial anisotropy, and can be either persistent (at lower intensities) or transient (at higher intensities). The nanoplasma is depleted by outer ionization that was semiquantitatively described by the cluster barrier suppression electrostatic model, which accounts for the cluster size, laser intensity, and pulse length dependence of the outer ionization yield. [source] Effect of eggplant transformed with oryzacystatin gene on Myzus persicae and Macrosiphum euphorbiaeJOURNAL OF APPLIED ENTOMOLOGY, Issue 2 2006A. P. O. Ribeiro Abstract:, The effect of a genetically modified eggplant line expressing oryzacystatin on Myzus persicae (Sulzer) and Macrosiphum euphorbiae (Thomas) was examined. The transgenic eggplant reduced the net reproductive rate (R0), the instantaneous rate of population increase (r), and the finite rate of population increase (,) of both aphids species compared with a control eggplant line. The mean generation time (T) of the aphids was unaffected by the transgenic plants. Age-specific mortality rates of M. persicae and M. euphorbiae were higher on transgenic plants. These results indicate that expression of oryzacystatin in eggplant has a negative impact on population growth and mortality rates of M. persicae and M. euphorbiae and could be a source of plant resistance for pest management of these aphids. [source] Fermentation of enzymatic hydrolysates from olive stones by Pachysolen tannophilusJOURNAL OF CHEMICAL TECHNOLOGY & BIOTECHNOLOGY, Issue 3 2009Manuel Cuevas Abstract BACKGROUND: Olive stones were pretreated with liquid hot water (LHW or autohydrolysis) at maximum temperatures between 175 and 225 °C (severity factors, logR0, between 2.73 and 4.39) to be subjected (both liquid and solid components) afterwards to enzymatic hydrolysis with cellulases from Trichoderma viride. Ethanol fermentation of hydrolysates was performed with the non-traditional yeast Pachysolen tannophilus ATCC 32691. RESULTS: After the enzymatic step, yields of hemicellulose solubilization reached 100%, while the cellulose was only partially hydrolysed (23%, logR0 = 4.39). The maximum yields in total reducing sugars and acetic acid, at the upper end of the severity range, was close to 0.25 and 0.04 g g,1 dry stone, respectively. During the fermentation stage, the increase in R0 reduced the maximum specific growth rate, biomass productivity, and overall biomass yield. The overall yields of ethanol and xylitol ranged, respectively, from 0.18 to 0.25 g g,1 and from 0.01 to 0.13 g g,1. CONCLUSIONS: The results demonstrate the possibility of producing ethanol from olive stones, making use of the cellulose and hemicellulose fraction of the waste. It was confirmed that the overall yield in xylitol strongly depended on severity factor, while the overall yield in ethanol remained practically constant for all the pretreatment conditions tested. Copyright © 2008 Society of Chemical Industry [source] Hydrothermal processing of rice husks: effects of severity on product distributionJOURNAL OF CHEMICAL TECHNOLOGY & BIOTECHNOLOGY, Issue 7 2008Rodolfo Vegas Abstract BACKGROUND: Treatment in aqueous media (hydrothermal or autohydrolysis reactions) is an environmentally friendly technology for fractionating lignocellulosic materials. Rice husks were subjected to hydrothermal processing under a variety of operational conditions to cause the selective breakdown of xylan chains, in order to assess the effects of reaction severity on the distribution of reaction products. RESULTS: The effects of severity (measured by the severity factor, R0) on the concentrations of the major autohydrolysis products (monosaccharides, xylo- and glucooligosaccharides, xylooligosaccharide substituents, acetic acid, acid-soluble lignin and elemental nitrogen) were assessed. The interrelationship between the severity of treatment and molecular weight distribution was established by high-performance size-exclusion chromatography. Selected samples were subjected to refining treatments as ethyl acetate extraction and ion exchange for refining purposes, and the concentrates were assayed by high-performance anion-exchange chromatography and matrix-assisted laser desorption/ionization time-of-flight mass spectrometry. CONCLUSIONS The protein equivalent of the products present in liquors accounted for 43 to 51% of the protein present in the raw rice husks. The concentrations of glucose (derived from starchy material) and arabinose (split from the xylan backbone) were fairly constant with severity. Even in treatments at low severity, high molecular weight compounds derived from xylan accounted for a limited part of the stoichiometric amount. Operating under harsh conditions, about 50% of the total xylan-derived compounds corresponded to fractions with a degree of polymerization (DP) < 9. After refining, saccharides accounted for more than 90% of the non-volatile components of the sample. The refined products showed a series of xylose oligomers up to about DP 13, and a series of acetylated xylose oligomers up to about DP 15. Copyright © 2008 Society of Chemical Industry [source] Inference of parasite local adaptation using two different fitness componentsJOURNAL OF EVOLUTIONARY BIOLOGY, Issue 3 2007D. REFARDT Abstract Estimating parasite fitness is central to studies aiming to understand parasite evolution. Theoretical models generally use the basic reproductive rate R0 to express fitness, yet it is very difficult to quantify R0 empirically and experimental studies often use fitness components such as infection intensity or infectivity as substitutes. These surrogate measures may be biased in several ways. We assessed local adaptation of the microsporidium Ordospora colligata to its host, the crustacean Daphnia magna using two different parasite fitness components: infection persistence over several host generations in experimental populations and infection intensity in individual hosts. We argue that infection persistence is a close estimator of R0, whereas infection intensity measures only a component of it. Both measures show a pattern that is consistent with parasite local adaptation and they correlate positively. However, several inconsistencies between them suggest that infection intensity may at times provide an inadequate estimate of parasite fitness. [source] Effects of different food restrictions on somatic and otolith growth in Nile tilapia reared under controlled conditionsJOURNAL OF FISH BIOLOGY, Issue 5 2002A. M. Massou .Nile tilapia Oreochromis niloticus, initial age 12 days, were given an unrestricted (NR) or restricted (R) ration over 93 days which resulted in fish of very different sizes although the body condition factor (K) and the viscero-somatic index (IV) remained almost unchanged. In a second stage (64 days) each group (NR & R) was divided into three subgroups that were subjected to 0 (NR0, R0), 15 (NR15, R15) and 30 (NR30, R30) days of food restriction, respectively. The impact of the different treatments on the somatic growth during the second stage of the experiment had an effect, with a highly significant difference between the mean ± S.D. masses (MT) in the different subgroups (NR0= 115.0 ± 26.6 g; NR15 = 94.8 ± 24.9 g; NR30 = 56.3 ± 28 g; R0 = 76.4 ± 20.1 g; R15 = 72.l ± 17.6 g; R30 = 43.6 ± 17.2 g). Similarly, K and IV decreased. Irrespective of the initial feeding condition, the width of the otolith microincrements started to decrease at the end of the first or second day of restricted feeding. In the subgroups given a restricted food ration for 30 days (NR30 and R30), this decrease reached a plateau at about day 30, which was maintained even when the restriction had ended. This slowed growth did not lead to any marked halt in microincrement formation, since there were no significant differences (ANOVA; P>0.05) in the numbers of increments counted in the various subgroups. The results show that in 153 day old fish, a period of severe food restriction, even if prolonged (15 to 30 days), had no influence on the timing of the laying down of microincrements but only affected their growth. [source] The influence of lithium on the antidiuretic effect of desmopressinJOURNAL OF PHARMACY AND PHARMACOLOGY: AN INTERNATI ONAL JOURNAL OF PHARMACEUTICAL SCIENCE, Issue 9 2002Torbjörn Callréus ABSTRACT The objective of this study was to investigate the graded influence from lithium on the antidiuretic effects of desmopressin. Eight healthy male subjects participated in this open, randomised cross-over study with two periods comprising 6 days each. For each subject, one of the study days (6th day) was preceded by a period of lithium treatment. On the study days the subjects were orally water loaded to achieve a state of overhydration with a high urine flow rate. When a steady-state diuresis was achieved after approximately 2 h, 0.396 ,g of desmopressin was administered intravenously as a bolus injection. An indirect-response model, where desmopressin was assumed to inhibit the elimination of response, was fitted to the urine osmolarity data. The effects of the independent variables, Uflow (baseline) (baseline urine flow rate), R0 (baseline osmolarity) and serum lithium concentration, on IC50 (concentration producing 50% of the maximum inhibition) could be expressed by multiple linear regression. In conclusion, we found that an indirect-response model can be a useful tool in investigating and describing the pharmacodynamic interaction between drugs, in this particular case, between lithium and desmopressin. [source] INVESTMENT RISK AND THE TRANSITION INTO HOMEOWNERSHIP,JOURNAL OF REGIONAL SCIENCE, Issue 2 2007Tracy M. Turner R0; D12; D84 ABSTRACT This paper investigates the extent to which house,price uncertainty affects the transition of renter households into homeownership. Using a 14-year household panel from the Panel Study of Income Dynamics during the years 1984,1997 and measures of the time-varying risk and return to owner-occupied housing, we estimate a Cox proportional hazard model of the effect of house,price volatility on the transition into homeownership. Results indicate that house,price uncertainty has a negative and dramatic impact on transitions into homeownership. In addition, we find that the low-wealth renters are particularly sensitive to house,price risk. [source] Extended multiorgan resection for T4 gastric carcinoma: 25-year experienceJOURNAL OF SURGICAL ONCOLOGY, Issue 2 2005Fabio Carboni MD Abstract Background and Objectives In locally advanced gastric carcinoma infiltrating adjacent organs, an extended resection including invaded organs is required to improve the prognosis. We retrospectively analyzed our experience with extended multiorgan resection (EMR) in patients with advanced gastric cancer. Methods Between December 1979 and April 2004, 65 patients were resected for extended gastric carcinoma macroscopically invading other organs. Various clinicopathologic factors influencing early and late results were evaluated. Survival rates were calculated according to the Kaplan,Meier method. Prognostic factors were evaluated by univariate and multivariate analysis. Results The majority of patients (61.5%) did receive a R0 curative resection. In 52 (80%) of the 65 presumed T4 cancers, histologic final analysis confirmed invasion. Postoperative morbidity and mortality was 27.7% and 12.3%, respectively. Actuarial 5-year overall survival (OS) rate was 21.8%. It was significantly better in R0 versus R+ (30.6% vs. 0%, P,=,0.001). Multivariate analysis identified curative resection as the strongest predictor of survival (P,=,0.002). Conclusions Patients with locally advanced gastric carcinoma invading adjacent organs can benefit from aggressive surgical treatment with acceptable morbidity and mortality. However, curative resection is mandatory to improve prognosis. J. Surg. Oncol. 2005;90:95,100. © 2005 Wiley-Liss, Inc. [source] The Quenched Instationary Polymerization Systems (QUIPS)MACROMOLECULAR THEORY AND SIMULATIONS, Issue 2-3 2003Irene Schnöll-Bitai Abstract The common element of quenched instationary polymerization systems is that at a given time all radicals present are deactivated by an efficient and fast quench reaction. Quenched instationary polymerizations can be carried out in a variety of ways distinguished by the way periods differing in their initiation characteristics are combined. The total chain length distribution of the resulting polymer is always the sum of the quenched radical and polymer chain length distribution. This distribution is either completely or at least partially dominated by the contribution of the quenched radical spectrum. Depending on the experimental conditions monomodal or multimodal distributions are obtained which can be characterized by their extrema (maximum, points of inflection) and peak widths (absolute, relative). The location of the extrema are related to the experimental parameters and can be used in an unambiguous way for the direct determination of the rate constant of propagation. Absolute peak widths (defined as the difference between two succeeding points of inflection) are invariant quantities with respect to the number, molar mass and hyper distribution which is only true for Poisson (and narrow Gauss) distributions. Relative peak widths are a valuable tool for the direct determination of axial dispersion which occurs in size exclusion chromatography. Comparison of experimental and ideal relative peak widths can be used for the direct determination of the axial dispersion. The influence of the type of termination and [R0] (termination by combination) on the total (number) chain length distribution for single , -pulse initiation. [source] On (,, , , q)-fuzzy filters of R0 -algebrasMLQ- MATHEMATICAL LOGIC QUARTERLY, Issue 5 2009Xueling Ma Abstract In this paper, we introduce the notions of (,, , , q)-fuzzy filters and (,, , , q)-fuzzy Boolean (implicative) filters in R0 -algebras and investigate some of their related properties. Some characterization theorems of these generalized fuzzy filters are derived. In particular, we prove that a fuzzy set in R0 -algebras is an (,, , , q)-fuzzy Boolean filter if and only if it is an (,, , , q)-fuzzy implicative filter. Finally, we consider the concepts of implication-based fuzzy Boolean (implicative) filters of R0 -algebras (© 2009 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim) [source] Monitoring lensed starlight emitted close to the Galactic centreMONTHLY NOTICES OF THE ROYAL ASTRONOMICAL SOCIETY, Issue 1 2004Adi Nusser ABSTRACT We describe the feasibility of detecting the gravitational deflection of light emitted by stars moving around the massive object at the Galactic centre. Light reaching us from an orbiting star can pass closer to the large central mass than the star itself, so the central potential is in principle constrained to a smaller radius by lensing rather than by orbit fitting. A mass of 4.3 × 106 M, causes a 0.1,2 mas deflection in the apparent position of orbiting stars in a cone of diameter 10° as seen from the central mass. The distance to the centre of the Galaxy is uniquely constrained from such measurements because lensing deflections depend on the ratio rg/R0 of the Schwarzschild radius to the distance to the black hole, R0, whereas the ratio rg/R30 is obtained by fitting the shapes of the orbits. Deflection measurements are complimentary to observations of radial velocities of stars which constrain the ratio rg/R0 in the framework of Newtonian gravity. [source] Two measures of the shape of the dark halo of the Milky WayMONTHLY NOTICES OF THE ROYAL ASTRONOMICAL SOCIETY, Issue 2 2000Rob P. Olling In order to test the reliability of determinations of the shapes of dark-matter haloes of the galaxies, we have made such measurements for the Milky Way by two independent methods. First, we have combined the measurements of the overall mass distribution of the Milky Way derived from its rotation curve and the measurements of the amount of dark matter in the solar neighbourhood obtained from stellar kinematics to determine the flattening of the dark halo. Secondly, we have used the established technique based on the variation in thickness of the Milky Way's H i layer with radius: by assuming that the H i gas is in hydrostatic equilibrium in the gravitational potential of a galaxy, one can use the observed flaring of the gas layer to determine the shape of the dark halo. These techniques are found to produce a consistent estimate for the flattening of the dark-matter halo, with a shortest-to-longest axis ratio of q,0.8, but only if one adopts somewhat non-standard values for the distance to the Galactic centre, R0, and the local Galactic rotation speed, ,0. For consistency, one requires values of R0,7.6 kpc and ,0,190 km s,1. The results depend on the Galactic constants because the adopted values affect both distance measurements within the Milky Way and the shape of the rotation curve, which, in turn, alter the inferred halo shape. Although differing significantly from the current IAU-sanctioned values, these upper limits are consistent with all existing observational constraints. If future measurements confirm these lower values for the Galactic constants, then the validity of the gas-layer-flaring method will be confirmed. Further, dark-matter candidates such as cold molecular gas and massive decaying neutrinos, which predict very flat dark haloes with q,0.2, will be ruled out. Conversely, if the Galactic constants were found to be close to the more conventional values, then there would have to be some systematic error in the methods for measuring dark halo shapes, so the existing modelling techniques would have to be viewed with some scepticism. [source] Stage, age and individual stochasticity in demographyOIKOS, Issue 12 2009Hal Caswell Demography is the study of the population consequences of the fates of individuals. Individuals are differentiated on the basis of age or, in general, life cycle stages. The movement of an individual through its life cycle is a random process, and although the eventual destination (death) is certain, the pathways taken to that destination are stochastic and will differ even between identical individuals; this is individual stochasticity. A stage-classified demographic model contains implicit age-specific information, which can be analyzed using Markov chain methods. The living stages in the life cycles are transient states in an absorbing Markov chain; death is an absorbing state. This paper presents Markov chain methods for computing the mean and variance of the lifetime number of visits to any transient state, the mean and variance of longevity, the net reproductive rate R0, and the cohort generation time. It presents the matrix calculus methods needed to calculate the sensitivity and elasticity of all these indices to any life history parameters. These sensitivities have many uses, including calculation of selection gradients. It is shown that the use of R0 as a measure of fitness or an invasion exponent gives erroneous results except when R0=,=1. The Markov chain approach is then generalized to variable environments (deterministic environmental sequences, periodic environments, iid random environments, Markovian environments). Variable environments are analyzed using the vec-permutation method to create a model that classifies individuals jointly by the stage and environmental condition. Throughout, examples are presented using the North Atlantic right whale (Eubaleana glacialis) and an endangered prairie plant (Lomatium bradshawii) in a stochastic fire environment. [source] Quantitative FRET Analysis With the E0GFP-mCherry Fluorescent Protein PairPHOTOCHEMISTRY & PHOTOBIOLOGY, Issue 1 2009Lorenzo Albertazzi Fluorescence resonance energy transfer (FRET) between fluorescent proteins (FPs) is a powerful tool to investigate protein,protein interaction and even protein modifications in living cells. Here, we analyze the E0GFP-mCherry pair and show that it can yield a reproducible quantitative determination of the energy transfer efficiency both in vivo and in vitro. The photophysics of the two proteins is reported and shows good spectral overlap (Förster radius R0 = 51 Å), low crosstalk between acceptor and donor channels, and independence of the emission spectra from pH and halide ion concentration. Acceptor photobleaching (APB) and one- and two-photon fluorescence lifetime imaging microscopy (FLIM) are used to quantitatively determine FRET efficiency values. A FRET standard is introduced based on a tandem construct comprising donor and acceptor together with a 20 amino acid long cleavable peptidic linker. Reference values are obtained via enzymatic cleavage of the linker and are used as benchmarks for APB and FLIM data. E0GFP-mCherry shows ideal properties for FLIM detection of FRET and yields high accuracy both in vitro and in vivo. Furthermore, the recently introduced phasor approach to FLIM is shown to yield straightforward and accurate two-photon FRET efficiency data even in suboptimal experimental conditions. The consistence of these results with the reference method (both in vitro and in vivo) reveals that this new pair can be used for very effective quantitative FRET imaging. [source] Analysis of electrical properties of insulators (Si3N4, SiO2, AlN, and Al2O3)/0.5 nm Si3N4/AlGaN/GaN heterostructuresPHYSICA STATUS SOLIDI (C) - CURRENT TOPICS IN SOLID STATE PHYSICS, Issue 7 2007Narihiko Maeda Abstract The electrical properties in AlGaN/GaN heterostructures with Si- and Al-based insulators (Si3N4, SiO2, AlN, and Al2O3) have been examined and analyzed. By insulators deposition, significant increase in the two-dimensional electron gas (2DEG) density (Ns) was observed with the order of Ns(Al2O3) > Ns(AlN) , Ns(SiO2) > Ns(Si3N4) > N0 (N0: Ns without insulators). As the result, the decrease in the sheet resistance (R) was observed; the smallest order of R was R(Al2O3) < R(AlN) < R(Si3N4) < R0 , R(SiO2) (R0: R without insulator). The insulators deposition effect has thus been shown to be significant and different among insulators. The increase in Ns was analyzed in terms of the change in the potential profile, and the observed differences in Ns among insulators have been interpreted. The band engineering including insulators is indispensable in understanding and designing AlGaN/GaN HFETs, since insulators are commonly used for the surface passivation as well as for the gate insulators, and the insulators deposition is to alter the essential device parameters such as the source resistance. (© 2007 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim) [source] | |||||||||||||||||||||||||||||||||||||||||||