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Selected AbstractsA novel approach to enable decorrelating multiuser detection without matrix inversion operationsINTERNATIONAL JOURNAL OF COMMUNICATION SYSTEMS, Issue 9 2004Hsiao-Hwa Chen Abstract This paper proposes a non-matrix inversion based algorithm to implement decorrelating detection (DD), namely quasi-decorrelating detector (QDD), which uses truncated matrix series expansion to overcome the problems associated with the matrix inversion in DD, such as noise enhancement, computational complexity and matrix singularity, etc. Two alternative QDD implementation schemes are presented in this paper; one is to use multi-stage feedforward filters and the other is to use an nth order single matrix filter (neither of which involves matrix inversion). In addition to significantly reduced computational complexity if compared with DD, the QDD algorithm offers a unique flexibility to trade among MAI suppression, near-far resistance and noise enhancement depending on varying system set-ups. The obtained results show that the QDD outperforms DD in either AWGN or multipath channel if a proper number of feed-forward stages can be used. We will also study the impact of correlation statistics of spreading codes on the QDD's performance with the help of a performance-determining factor derived in the paper, which offers a code-selection guideline for the optimal performance of QDD algorithm. Copyright © 2004 John Wiley & Sons, Ltd. [source] A new efficient method for determining the number of components in PARAFAC modelsJOURNAL OF CHEMOMETRICS, Issue 5 2003Rasmus Bro Abstract A new diagnostic called the core consistency diagnostic (CORCONDIA) is suggested for determining the proper number of components for multiway models. It applies especially to the parallel factor analysis (PARAFAC) model, but also to other models that can be considered as restricted Tucker3 models. It is based on scrutinizing the ,appropriateness' of the structural model based on the data and the estimated parameters of gradually augmented models. A PARAFAC model (employing dimension-wise combinations of components for all modes) is called appropriate if adding other combinations of the same components does not improve the fit considerably. It is proposed to choose the largest model that is still sufficiently appropriate. Using examples from a range of different types of data, it is shown that the core consistency diagnostic is an effective tool for determining the appropriate number of components in e.g. PARAFAC models. However, it is also shown, using simulated data, that the theoretical understanding of CORCONDIA is not yet complete. Copyright © 2003 John Wiley & Sons, Ltd. [source] Selecting significant factors by the noise addition method in principal component analysisJOURNAL OF CHEMOMETRICS, Issue 7 2001Brian K. Dable Abstract The noise addition method (NAM) is presented as a tool for determining the number of significant factors in a data set. The NAM is compared to residual standard deviation (RSD), the factor indicator function (IND), chi-squared (,2) and cross-validation (CV) for establishing the number of significant factors in three data sets. The comparison and validation of the NAM are performed through Monte Carlo simulations with noise distributions of varying standard deviation, HPLC/UV-vis chromatographs of a mixture of aromatic hydrocarbons, and FIA of methyl orange. The NAM succeeds in correctly identifying the proper number of significant factors 98% of the time with the simulated data, 99% in the HPLC data sets and 98% with the FIA data. RSD and ,2 fail to choose the proper number of factors in all three data sets. IND identifies the correct number of factors in the simulated data sets but fails with the HPLC and FIA data sets. Both CV methods fail in the HPLC and FIA data sets. CV also fails for the simulated data sets, while the modified CV correctly chooses the proper number of factors an average of 80% of the time. Copyright © 2001 John Wiley & Sons, Ltd. [source] How to obtain statistically converged MM/GBSA resultsJOURNAL OF COMPUTATIONAL CHEMISTRY, Issue 4 2010Samuel Genheden Abstract The molecular mechanics/generalized Born surface area (MM/GBSA) method has been investigated with the aim of achieving a statistical precision of 1 kJ/mol for the results. We studied the binding of seven biotin analogues to avidin, taking advantage of the fact that the protein is a tetramer with four independent binding sites, which should give the same estimated binding affinities. We show that it is not enough to use a single long simulation (10 ns), because the standard error of such a calculation underestimates the difference between the four binding sites. Instead, it is better to run several independent simulations and average the results. With such an approach, we obtain the same results for the four binding sites, and any desired precision can be obtained by running a proper number of simulations. We discuss how the simulations should be performed to optimize the use of computer time. The correlation time between the MM/GBSA energies is ,5 ps and an equilibration time of 100 ps is needed. For MM/GBSA, we recommend a sampling time of 20,200 ps for each separate simulation, depending on the protein. With 200 ps production time, 5,50 separate simulations are required to reach a statistical precision of 1 kJ/mol (800,8000 energy calculations or 1.5,15 ns total simulation time per ligand) for the seven avidin ligands. This is an order of magnitude more than what is normally used, but such a number of simulations is needed to obtain statistically valid results for the MM/GBSA method. © 2009 Wiley Periodicals, Inc. J Comput Chem 2010 [source] Katakana representation of English loanwords: Mora conservation and variable learner strategiesJOURNAL OF SOCIOLINGUISTICS, Issue 3 2004Dennis R. Preston In Japanese, English CVC monosyllables usually show consonant gemination after obligatory vowel epenthesis (e.g. ,put' becomes ,putto'). The katakana syllabary, which is a good reflection of pronunciation, allows us to study very quickly how a number of native speakers and learners at various levels handle novel loanwords. We show that, while learners do not geminate at as high a rate as native speakers do, they improve over years of study. More interestingly, learners use another strategy, namely vowel lengthening (e.g. ,puuto'), to represent these items, a compensatory strategy, we believe, related to their perception of the proper number of morae to be rendered in the output. We show how Broselow and Park's (1995) account of mora conservation will not handle the complexity of these data, particularly learner performance in the gemination of unstressed syllables, and we provide a variable account rather than one which suggests that parameters are set to a native speaker, learner, or mixed setting. Additionally, we show the surprising influence of gender in some areas of learner performance, a reflex, we believe, of the type of male students more typically registered in Japanese language classes at the university level. [source] Cadherin-8 and N-cadherin differentially regulate pre- and postsynaptic development of the hippocampal mossy fiber pathwayHIPPOCAMPUS, Issue 4 2008Iddil H. Bekirov Abstract Cells sort into regions and groups in part by their selective surface expression of particular classic cadherins during development. In the nervous system, cadherin-based sorting can define axon tracts, restrict axonal and dendritic arbors to particular regions or layers, and may encode certain aspects of synapse specificity. The underlying model has been that afferents and their targets hold in common the expression of a particular cadherin, thereby providing a recognition code of homophilic cadherin binding. However, most neurons express multiple cadherins, and it is not clear whether multiple cadherins all act similarly in shaping neural circuitry. Here we asked how two such cadherins, cadherin-8 and N-cadherin, influence the guidance and differentiation of hippocampal mossy fibers. Using organotypic hippocampal cultures, we find that cadherin-8 regulates mossy fiber fasciculation and targeting, but has little effect on CA3 dendrites. In contrast, N-cadherin regulates mossy fiber fasciculation, but has little impact on axonal growth and targeting. However, N-cadherin is essential for CA3 dendrite arborization. Both cadherins are required for formation of proper numbers of presynaptic terminals. Mechanistically, such differential actions of these two cadherins could, in theory, reflect coupling to distinct intracellular binding partners. However, we find that both cadherins bind ,-catenin in dentate gyrus (DG). This suggests that cadherins may engage different intracellular signaling cascades downstream of ,-catenin, coopt different extracellular binding partners, or target distinct subcellular domains. Together our findings demonstrate that cadherin-8 and N-cadherin are critical for generating the mossy fiber pathway, but that each contributes differentially to afferent and target differentiation, thereby complementing one another in the assembly of a synaptic circuit. © 2007 Wiley-Liss, Inc. [source] |