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Selected AbstractsFate of fatty acids at rest and during exercise: regulatory mechanismsACTA PHYSIOLOGICA, Issue 4 2003M. D. Jensen Abstract Fatty acids are a major fuel source for humans both at rest and during exercise. Plasma free fatty acids (FFA), although present only in micromolar concentrations, are the major circulating lipid fuel. FFA availability can increase two- to four-fold with moderate intensity exercise. Other potential sources of fatty acids include circulating very low-density lipoprotein (VLDL) triglycerides (TGs) (,1/5 the fuel availability of FFA) and intramyocellular TGs (,2 mmol kg,1 muscle). At rest ,40% of systemic FFA uptake occurs in the splanchnic bed and uptake in legs is ,15,20%. During leg exercise the uptake of FFA in leg tissue increases to 30,60% of systemic uptake and splanchnic uptake decreases to 15%. The fate of VLDL TG fatty acids has not been adequately studied. Intramyocellular TG hydrolysis increases during exercise, but the factors that regulate this response are not clear. The fact that contraction of isolated muscles can stimulate the hydrolysis and oxidation of intramyocellular TGs (in the absence of hormonal or neural input) suggests an intracellular regulation of this process. Additional regulation from changes in catecholamines and insulin may also occur. During moderate intensity exercise circulating FFA and intramyocellular TG provide roughly equal portions of fatty acids for oxidation. In addition to endurance training, dietary factors have been shown to modulate the fatty acid oxidation response to exercise. Much remains to be learned about fatty acid trafficking during exercise. What role do VLDL TG play? How is the oxidation of intramyocellular TGs regulated? Techniques to address these questions in humans are only now becoming available. [source] Steps towards a centralized nervous system in basal bilaterians: Insights from neurogenesis of the acoel Symsagittifera roscoffensisDEVELOPMENT GROWTH & DIFFERENTIATION, Issue 8 2010Henrike Semmler Due to its proposed basal position in the bilaterian Tree of Life, Acoela may hold the key to our understanding of the evolution of a number of bodyplan features including the central nervous system. In order to contribute novel data to this discussion we investigated the distribution of ,-tubulin and the neurotransmitters serotonin and RFamide in juveniles and adults of the sagittiferid Symsagittifera roscoffensis. In addition, we present the expression pattern of the neuropatterning gene SoxB1. Adults and juveniles exhibit six serotonergic longitudinal neurite bundles and an anterior concentration of serotonergic sensory cells. While juveniles show an "orthogon-like" arrangement of longitudinal neurite bundles along the anterior-posterior axis, it appears more diffuse in the posterior region of adults. Commissures between the six neurite bundles are present only in the anterior body region of adults, while irregularly distributed individual neurites, often interconnected by serotonergic nerve cells, are found in the posterior region. Anti-RFamide staining shows numerous individual neurites around the statocyst. The orthogon-like nervous system of S. roscoffensis is confirmed by ,-tubulin immunoreactivity. In the region of highest neurotransmitter density (i.e., anterior), the HMG-box gene SrSoxB1, a transcription factor known to be involved in neurogenesis in other bilaterians, is expressed in juvenile specimens. Accordingly, SoxB1 expression in S. roscoffensis follows the typical pattern of higher bilaterians that have a brain. Thus, our data support the notion that Urbilateria already had the genetic toolkit required to form brain-like neural structures, but that its morphological degree of neural concentration was still low. [source] Critical evaluation of cognitive dysfunctions as endophenotypes of schizophreniaACTA PSYCHIATRICA SCANDINAVICA, Issue 2 2004S. Kéri Objective:, Cognitive dysfunctions are potential endophenotypes of schizophrenia. The aim of this study was to investigate whether recent evidence indeed suggests that cognitive dysfunctions are potent indicators of specific genetic traits that represent susceptibility for schizophrenia. Method:, Studies including large, well-defined samples and controlled cognitive assessment have been reviewed. Results:, Evidence suggests that schizophrenia patients and their unaffected biological relatives are impaired in several cognitive domains, including working memory, executive functions, sustained attention, verbal episodic memory, processing of visual and auditory stimuli, and smooth pursuit eye movements. However, these impairments are present only in a limited proportion of subjects, showing low specificity and sensitivity and high variability. Linkage with specific genes is weak. Conclusion:, Although some results are promising, at present cognitive dysfunctions cannot be considered as highly sensitive and specific endophenotypes of schizophrenia. [source] Structural and ultrastructural studies of male reproductive tract and spermatozoa in Xylocopa frontalis (Hymenoptera, Apidae)ACTA ZOOLOGICA, Issue 2 2010B. S. Fiorillo Abstract Fiorillo, B. S., Zama, U., Lino-Neto, J. and Báo, S. N. 2010. Structural and ultrastructural studies of male reproductive tract and spermatozoa in Xylocopa frontalis (Hymenoptera, Apidae). ,Acta Zoologica (Stockholm) 91: 176,183. In Xylocopa frontalis the reproductive tract is composed of testes, deferent ducts, seminal vesicles, accessory glands and an ejaculatory duct. Each testis comprises four testicular tubules in which multiple cysts are present containing approximately 64 spermatozoa per cyst. The seminal vesicle consists of an epithelium, a thick basement lamina and a muscular external sheet. In the luminal region some vesicles can be observed; however, the epithelial cells of the seminal vesicle do not display morphological features associated with secretory functions. The spermatozoa, measuring approximately 260 µm long, are similar to the hymenopteran pattern. The head region consists of an acrosome with an inner perforatorium that penetrates an asymmetrical nuclear tip. The nucleus is linear, electron-dense and its posterior tip projects into the beginning of the axoneme. The centriolar adjunct is asymmetric with many electron-lucent lacunae interspersed throughout. The axoneme has the 9 + 9 + 2 pattern of microtubules and in the posterior region the central microtubules finish first, followed by the doublets and finally the accessory microtubules. The mitochondrial derivatives are asymmetric in both length and diameter with paracrystalline material present only in the larger one. These features may be useful characters for taxonomy and phylogenetic studies. [source] Effect of celecoxib on cyclooxygenase-2 expression and possible variants in a patient with Barrett's esophagusDISEASES OF THE ESOPHAGUS, Issue 3 2007G. A. Jacobson SUMMARY., Cyclooxygenase-2 (COX-2) expression is increased in metaplastic and dysplastic Barrett's esophageal epithelium and it is thought that selective COX-2 inhibitors could offer hope as chemoprevention therapy. The aim of the study was to investigate the in vivo effect of celecoxib on COX-2 expression in patients with Barrett's esophagus and no recent history of non-steroidal anti-inflammatory drug use. Endoscopic mucosal biopsy specimens were collected at baseline and after 28 days of therapy in a patient treated with celecoxib 200 mg twice daily. Samples were analyzed for COX-2 expression by immunoblot analysis with chemiluminescence detection. COX-2 expression was found to decline 20% and 44% at two different biopsy sites compared to the baseline sample. Longer exposures revealed a number of previously unidentified proteins above and below the 67 kDa COX-2 protein including 38 kDa and 45 kDa proteins which were present only at study completion consistent with up-regulation after celecoxib therapy. Further investigations of the 38 kDa and 45 kDa proteins were undertaken using two-dimensional polyacrylamide gel electrophoresis (2D-PAGE) with immunoblot and MALDI-TOF (matrix assisted laser desorption ionization , time of flight) analysis but no matches were found and results were inconclusive. Unmatched masses from MALDI-TOF peptide mass fingerprinting were compared with human COX-2 (67 kDa) and COX-2b (39 kDa) using unspecific cleavage. Peptide sequence homology with COX-2 and COX-2b was found for a length of 19 amino acids. Based on immunodetection, molecular weight and equivical MALDI-TOF results, one of these up-regulated proteins may be COX-2b. [source] Electroosmotic flow in a poly(dimethylsiloxane) channel does not depend on percent curing agentELECTROPHORESIS, Issue 7-8 2004Aaron R. Wheeler Abstract Poly(dimethylsiloxane) (PDMS) microfluidic devices were prepared from different ratios of "curing agent" (which contains silicon hydride groups) to "base" (which contains vinyl-terminated noncross-linked PDMS), to determine the effect of this ratio on electroosmotic flow (EOF). In fabricating devices for this purpose, a novel method for permanently enclosing PDMS channels was developed. As a supplement to the microfluidic method, the inner walls of capillaries were coated with PDMS formed from varying ratios of curing agent to base. EOF was found to be constant for PDMS formed with each ratio, which implies that the negative surface charges do not arise from chemical species present only in the base or the curing agent. [source] Impacts of nonpoint inputs from potato farming on populations of slimy sculpin (Cottus cognatus)ENVIRONMENTAL TOXICOLOGY & CHEMISTRY, Issue 9 2005Michelle A. Gray Abstract The potential influence of agricultural activity, particularly potato cultivation, on slimy sculpin populations (Cottus cognatus) was examined at 19 rivers of New Brunswick, Canada. Comparisons with forested streams resulted in differences in fish density, size, and reproductive performance. Young-of-the-year (YOY) sculpin were present only at two of 11 agricultural sites, though they were present at all nine forested sites. Sediment deposition was greatest at agricultural sites, with increased fine sediments deposited. Larger, coarse sands were deposited at two sites with active forest operations. Temperature had a stronger correlation than sedimentation with sculpin size and density in the agricultural region. Agricultural catchments were warmer than in forested catchments (median = 16.0 and 13.3°C, respectively). Body size of slimy sculpin was correlated positively and YOY densities correlated negatively with temperature, and sites with temperatures ,25°C were devoid of YOY sculpin. Our data indicate there is a significant effect of temperature on slimy sculpin populations in rivers of potato farming areas, highlighting the importance of examining indirect factors when investigating possible impacts of nonpoint source agricultural inputs. Indirect factors such as sediment deposition and temperature need to be considered in order to discriminate accurately the chronic impacts of agricultural chemicals on fish populations. [source] Effects of the androgenic growth promoter 17-,-trenbolone on fecundity and reproductive endocrinology of the fathead minnow,ENVIRONMENTAL TOXICOLOGY & CHEMISTRY, Issue 6 2003Gerald T. Ankley Abstract Trenbolone acetate is a synthetic steroid that is extensively used in the United States as a growth promoter in beef cattle. The acetate is administered to livestock via slow-release implants; some is converted by the animal to 17-,-trenbolone, a relatively potent androgen receptor agonist in mammalian systems. Recent studies indicate that excreted 17-,-trenbolone is comparatively stable in animal waste, suggesting the potential for exposure to aquatic animals via direct discharge, runoff, or both. However, little is known concerning the toxicity of trenbolone to fish. Our goal was to assess the effects of 17-,-trenbolone on reproductive endocrinology of the fathead minnow (Pimephales promelas). An in vitro competitive binding study with the fathead minnow androgen receptor demonstrated that 17-,-trenbolone had a higher affinity for the receptor than that of the endogenous ligand, testosterone. Male and female fish were exposed for 21 d to nominal (target) concentrations of 17-,-trenbolone ranging from 0.005 to 50 ,g/L. Fecundity of the fish was significantly reduced by exposure to measured test concentrations , 0.027 ,g/ L. The 17-,-trenbolone was clearly androgenic in vivo at these concentrations, as evidenced by the de novo production in females of dorsal (nuptial) tubercles, structures normally present only on the heads of mature males. Plasma steroid (testosterone and ,-estradiol) and vitellogenin concentrations in the females all were significantly reduced by exposure to 17-,-trenbolone. The 17-,-trenbolone also altered reproductive physiology of male fathead minnows, albeit at concentrations much higher than those producing effects in females. Males exposed to 17-,-trenbolone at 41 ,g/L (measured) exhibited decreased plasma concentrations of 11-ketotestosterone and increased concentrations of ,-estradiol and vitellogenin. Overall, our studies indicate that 17-,-trenbolone is a potent androgen and reproductive toxicant in fish. Given the widespread use of trenbolone acetate as a growth promoter, and relative stability of its metabolites in animal wastes, further studies are warranted to assess potential ecological risk. [source] Pramipexole and pergolide in the treatment of depression in Parkinson's disease: a national multicentre prospective randomized studyEUROPEAN JOURNAL OF NEUROLOGY, Issue 4 2003I. Rektorová An 8-month multicentre prospective randomized study aimed at comparing the effects of dopamine receptor agonists pramipexole (PPX; Mirapexin®) and pergolide (PRG; Permax®) as add-on to L-dopa therapy on depression [Montgomery and Asberg Depression Rating Scale (MADRS)] in 41 non-demented patients (25 men, 16 women) suffering from both mild or moderate depression and advanced Parkinson's disease (PD). The assessment was performed by a blinded independent observer. Motor symptoms (UPDRS III), motor complications (UPDRS IV), activities of daily living (UPDRS II and VI) and depressive symptoms as measured by Self , Rating Depression Scale by Zung were evaluated in an open-label design. The average value of Zung scores decreased significantly in both groups with no statistical difference between both groups. A significant decrease in the average value of MADRS scores was present only in the PPX group. The average UPDRS scores decreased significantly with no statistical difference between both groups at the comparable average total daily dose of both preparations. In both cases, the total daily dose of L-dopa decreased significantly but the decrease was statistically more pronounced in the PRG group. Our results demonstrate the antidepressant effect of PPX in patients with PD while we can't make any conclusions with regard to antidepressant effect of PRG. [source] Two-way active avoidance training-specific increases in phosphorylated cAMP response element-binding protein in the dorsal hippocampus, amygdala, and hypothalamusEUROPEAN JOURNAL OF NEUROSCIENCE, Issue 12 2005Subhash Saha Abstract Previous studies have demonstrated that the activation of pontine-wave (P-wave) generating cells in the brainstem during post-training rapid eye movement (REM) sleep is critical for the consolidation of memory for two-way active avoidance (TWAA) learning in the rat. Here, using immunocytochemistry, we investigated the spatio-temporal distribution of CREB phosphorylation within different parts of the dorsal hippocampus, amygdala, and hypothalamus following a session of TWAA training in the rat. We show that the TWAA training trials increased phosphorylation of CREB (p-CREB) in the dorsal hippocampus, amygdala, amygdalo-hippocampal junction (AHi), and hypothalamus. However, the time intervals leading to training-induced p-CREB activity were different for different regions of the brain. In the dorsal hippocampus, p-CREB activity was maximal at 90 min and this activity disappeared by 180 min. In the AHi, activity of the p-CREB peaked by 180 min and disappeared by 360 min. In the amygdala, the p-CREB activity peaked at 180 min and still remained higher than the control at the 360 min interval. In the hypothalamus, at 90 min p-CREB activity was present only in the ventromedial hypothalamus; however, by 180 min this p-CREB activity was also present in the dorsal hypothalamus, perifornical area, and lateral hypothalamus. By 360 min, p-CREB activity disappeared from the hypothalamus. This TWAA training trials-induced spatiotemporal characteristic of CREB phosphorylation, for the first time, suggests that REM sleep P-wave generator activation-dependent memory processing involves different parts of the dorsal hippocampus, amygdala, and hypothalamus. [source] Distribution of SIBLING proteins in the organic and inorganic phases of rat dentin and boneEUROPEAN JOURNAL OF ORAL SCIENCES, Issue 2 2008Bingzhen Huang The SIBLING protein family is a group of non-collagenous proteins (NCPs) that includes dentin sialophosphoprotein (DSPP), dentin matrix protein 1 (DMP1), bone sialoprotein (BSP), and osteopontin (OPN). In the present study, we compared these four proteins in different phases of rat dentin and bone. First, we extracted NCPs in the unmineralized matrices and cellular compartments using guanidium-HCl (G1). Second, we extracted NCPs closely associated with hydroxyapatite using an EDTA solution (E). Last, we extracted the remaining NCPs again with guanidium-HCl (G2). Each fraction of Q-Sepharose ion-exchange chromatography was analyzed using sodium dodecyl sulfate,polyacrylamide gel electrophoresis (SDS,PAGE), Stains-All stain, and with western immunoblotting. In dentin, the NH2 -terminal fragment of DSPP and its proteoglycan form were primarily present in the G1 extract, whereas the COOH-terminal fragment of DSPP was present exclusively in the E extract. The processed NH2 -terminal fragment of DMP1 was present in G1 and E extracts, whereas the COOH-terminal fragment of DMP1 existed mainly in the E extract. Bone sialoprotein was present in all three extracts of dentin and bone, whereas OPN was present only in the G1 and E extracts of bone. The difference in the distribution of the SIBLING proteins between organic and inorganic phases supports the belief that these molecular species play different roles in dentinogenesis and osteogenesis. [source] Characterization of 1H NMR detectable mobile lipids in cells from human adenocarcinomasFEBS JOURNAL, Issue 5 2009Anna Maria Luciani Magnetic resonance spectroscopy studies are often carried out to provide metabolic information on tumour cell metabolism, aiming for increased knowledge for use in anti-cancer treatments. Accordingly, the presence of intense lipid signals in tumour cells has been the subject of many studies aiming to obtain further insight on the reaction of cancer cells to external agents that eventually cause cell death. The present study explored the relationship between changes in neutral lipid signals during cell growth and after irradiation with gamma rays to provide arrest in cell cycle and cell death. Two cell lines from human tumours were used that were differently prone to apoptosis following irradiation. A sub-G1 peak was present only in the radiosensitive HeLa cells. Different patterns of neutral lipids changes were observed in spectra from intact cells, either during unperturbed cell growth in culture or after radiation-induced growth arrest. The intensities of triglyceride signals in the spectra from extracted total lipids changed concurrently. The increase in lipid peak intensities did not correlate with the apoptotic fate. Modelling to fit the experimental data revealed a dynamic equilibrium between the production and depletion of neutral lipids. This is observed for the first time in cells that are different from adipocytes. [source] Human haptoglobin structure and function , a molecular modelling studyFEBS JOURNAL, Issue 22 2008F. Polticelli Hemoglobin is the most prominent protein in blood, transporting O2 and facilitating reactive oxygen and nitrogen species detoxification. Hemoglobin metabolism leads to the release of extra-erythrocytic hemoglobin, with potentially severe consequences for health. Extra-erythrocytic hemoglobin is complexed to haptoglobin for clearance by tissue macrophages. The human gene for haptoglobin consists of three structural alleles: Hp1F, Hp1S and Hp2. The products of the Hp1F and Hp1S alleles differ by only one amino acid, whereas the Hp2 allele is the result of a fusion of the Hp1F and Hp1S alleles, is present only in humans and gives rise to a longer ,-chain. Haptoglobin consists of a dimer of ,,-chains covalently linked by a disulphide bond between the Cys15 residue of each ,-chain. However, the presence of the Hp1 and Hp2 alleles in humans gives rise to HPT1-1 dimers (covalently linked by Cys15 residues), HPT1-2 hetero-oligomers and HPT2-2 oligomers. In fact, the HPT2 variant displays two free Cys residues (Cys15 and Cys74) whose participation in intermolecular disulphide bonds gives rise to higher-order covalent multimers. Here, the complete modelling of both haptoglobin variants, together with their basic quaternary structure arrangements (i.e. HPT1 dimer and HPT2 trimer), is reported. The structural details of the models, which represent the first complete view of the molecular details of human haptoglobin variants, are discussed in relation to the known haptoglobin function(s). [source] Differences in the skin peptides of the male and female Australian tree frog Litoria splendidaFEBS JOURNAL, Issue 1 2000The discovery of the aquatic male sex pheromone splendipherin, a new antibiotic peptide caerin 1.10, together with Phe8 caerulein The skin secretions of female and male Litoria splendida have been monitored monthly over a three-year period using HPLC and electrospray mass spectrometry. Two minor peptides are present only in the skin secretion of the male. The first of these is the female-attracting aquatic male sex pheromone that we have named splendipherin, a 25 amino acid peptide (GLVSSIGKALGGLLADVVKSKGQPA-OH). This pheromone constitutes about 1% of the total skin peptides during the breeding season (January to March), dropping to about 0.1% during the period June to November. Splendipherin attracts the female in water at a concentration of 10,11,10,9 m, and is species specific. The second peptide is a wide-spectrum antibiotic of the caerin 1 group, a 25 residue peptide (GLLSVLGSVAKHVLPHVVPVIAEKL-NH2) named caerin 1.10. The neuropeptides of L. splendida are also seasonally variable, the change identical for both the female and male. During the period October to March, the sole neuropeptide present in skin secretions is caerulein [pEQDY(SO3)TGWMDF-NH2]; this is active on smooth muscle and is also an analgaesic. During the southern winter (June to September), more than half of the caerulein is hydrolysed to [pEQDYTGWMDF-NH2], a peptide that shows no smooth muscle activity. In place of caerulein, a new peptide, Phe8 caerulein [pEQDY(SO3)TGWFDF-NH2], becomes a major component of the skin secretion. Perhaps this seasonal change is involved in thermoregulation, that is, with the initiation and maintenance of the inactive (hibernation) phase of the animal. [source] Identification and characterization of KvgAS, a two-component system in Klebsiella pneumoniae CG43FEMS MICROBIOLOGY LETTERS, Issue 1 2003Yi-Chyi Lai Abstract A two-component system encoding gene cluster kvgAS that is present only in virulent Klebsiella pneumoniae CG43 was isolated and its sequence determined. RT-PCR and Southern analysis demonstrated that kvgAS is organized as an operon. No apparent effect of a kvgS deletion on bacterial virulence was observed in a mouse peritonitis model. In the presence of paraquat or 2,2-dipyridyl, the activity of kvgAS promoter in the kvgS mutant was found to be reduced to half of the level in the wild-type strain. The data suggest that the KvgAS system is autoregulated and plays a role in countering free radical stresses and sensing iron-limiting conditions. [source] Vegetative compatibility types of Cryphonectria parasitica, causal agent of chestnut blight, in the Black Sea region of TurkeyFOREST PATHOLOGY, Issue 6 2009S. Akilli Summary Vegetative compatibility types (vc types) of 296 isolates of the chestnut blight fungus, Cryphonectria parasitica, were determined. The isolates had been obtained from 32 localities in 11 provinces in the Black Sea region of Turkey. Five vc types were detected: EU-1, EU-12, EU-14, EU-2 and EU-5. The number of vc types found in single provinces varied between one and five. All of the five vc types were present only in the Kastamonu province. Vc type EU-1 was detected in all the provinces. EU-1 accounted for 90.8% of all isolates. Vc type EU-12 was present in eight provinces and accounted for 6.8% of the isolates, whereas one or two isolates each of EU-14, EU-2 and EU-5 were found in one or two provinces. Isolates possessing the white colony phenotype were considered to be hypovirulent. Hypovirulent isolates of each vc type were found, and they were detected in nine of 11 provinces. [source] Population size, weight distribution and food in a persistent population of the rare medicinal leech, Hirudo medicinalisFRESHWATER BIOLOGY, Issue 8 2008J. M. ELLIOTT Summary 1. It is important for species recovery and conservation management projects to know the minimum viable population size for rare and endangered species, such as the medicinal leech, Hirudo medicinalis. Therefore, using a catch-removal method, this study estimated every two years (1986, 1988, 1990, 1992) the total number of medicinal leeches in a tarn in the English Lake District, and the number of mature adults in the population. 2. Four samples were taken each year in June and July, when water temperatures exceeded 20 °C. Population size was estimated both by maximum likelihood and regression methods. All leeches were weighed alive and size groups were separated by polymodal frequency analysis. A small sample of the blood meal in each leech gut was taken before the leeches were returned to the tarn, and was used to estimate the proportion of mammalian and non-mammalian blood in the meals. 3. Both methods of estimation produced similar values, increasing confidence in the population estimates. Values for the total population in June and July varied among years from 248 to 288, the maximum value being only 16% higher than the minimum. Values for the number of mature leeches varied from 48 to 58 (19,20% of the total population), and this was an estimate of the effective population size. 4. There were four size groups. The largest mature leeches (live weight >5 g) in group IV formed only 1% of the population, and the smallest (0.02,0.5 g) in group I 14,17%. Most leeches were in two overlapping groups of immature (64,67% of population) and mature (18%) leeches with size ranges of 0.4,3.4 g and 2.5,5 g respectively. The percentage of leeches in each size group was very consistent among years. Blood meals were found in 38,44% of the leeches in group I, 45,50% in group II, 70,75% in group III, and 100% in group IV, but mammalian blood was present only in larger mature leeches (>3.5 g). 5. Medicinal leeches were first detected in the tarn in 1980 and are still present in 2007, so the population has persisted for at least 27 years. Compared with minimum viable population sizes for other species, including many endangered species, values for this medicinal leech population are extremely low, but may be typical of some rare freshwater invertebrates in isolated habitats. [source] Food quality influences habitat selection in DaphniaFRESHWATER BIOLOGY, Issue 5 2008ELKE S. REICHWALDT Summary 1. The vertical distribution of Daphnia in stratified lakes strongly depends on the depth profiles of temperature and food resources. However, ecological requirements for these factors are slightly different for juvenile and adult Daphnia. 2. Here, I investigated whether food quality influences the habitat selection of Daphnia pulicaria at night and whether the habitat selection of juvenile and adult D. pulicaria is different. Daphnia were allowed to choose their optimal habitat in large, stratified water columns (plankton towers, Plön) that held either the green alga Scenedesmus obliquus (high quality) in the cold hypolimnion (Hypo-treatment) or S. obliquus in the warm epi- and cold hypolimnion (SCEN-treatment) or the non-toxic cyanobacterium Synechococcus elongatus (low quality) in the warm epilimnion and S. obliquus in the cold hypolimnion (SYN treatment). 3. When food (S. obliquus) was present only in the hypolimnion (Hypo-treatment), juveniles and adults distributed similarly in the water column and spent most of their time in the interface between the warm and the food rich layer. 4. When food was present in the epilimnion and hypolimnion (SCEN- and SYN-treatments), juvenile and adult D. pulicaria moved into the warm and now also food-rich epilimnion, however, the magnitude of this shift depended on the food type and age class of Daphnia. Adult and juvenile D. pulicaria spent most of their time in the epilimnion when food there was of a high quality (S. obliquus; SCEN-treatment). However, compared to the juveniles, adult Daphnia spent significantly more time in the colder hypolimnion when epilimnetic food was of a low quality (S. elongatus; SYN-treament). 5. Therefore, habitat selection of adult D. pulicaria was affected by food quality whereas the habitat selection of juveniles was not. 6. Additional growth and reproduction experiments show that the food quality is likely to be responsible for the different habitat selection of juveniles and adults in the SYN-treatment. 7. In conclusion, my experiments show that D. pulicaria behaviourally reacts to the quality of its food source. [source] Two hundred years of a diverse Daphnia community in Lake Naivasha (Kenya): effects of natural and human-induced environmental changesFRESHWATER BIOLOGY, Issue 8 2004Joachim Mergeay Summary 1. We used fossil diapausing eggs extracted from 210Pb-dated sediment cores to reconstruct historical changes in the Daphnia community of Lake Naivasha, a climate-sensitive lake in Kenya which over the past 200 years has experienced a series of well-documented natural and anthropogenic environmental changes. 2. Contiguous sampling and analysis of four cores yielded ephippial capsules of eight Daphnia species. Only two of these had been recorded previously in live collections from Lake Naivasha, and one species is new to science. The four more common species (Daphnia barbata, D. laevis, D. magna, and D. pulex) show striking differences in abundance patterns and population dynamics through time. Four other species (D. lumholtzi, D. curvirostris, D. longispina s.l., and Daphnia sp. nov. type Limuru.) appear to have been present only occasionally. Nevertheless, between 1895 and 1915 seven species of Daphnia inhabited Lake Naivasha simultaneously. 3. Despite considerable natural environmental change associated with climate-driven lake-level fluctuations, the Daphnia community of Lake Naivasha has been severely affected by human activities over the past century, especially the introduction of exotic fishes and water-quality changes because of agricultural soil erosion. The recent reappearance of large-bodied Daphnia species (D. magna, D. barbata, D. lumholtzi, Daphnia sp. nov. type Limuru) after 20,110 years of absence can be explained by their release from fish predation, following a dramatic increase in turbidity caused by excess clastic sediment input from eroded catchment soils. The small-bodied species D. laevis has fared less well recently, presumably because the benefit of lowered predation pressure is counteracted by more pronounced negative effects of increased turbidity on this species and loss of submerged macrophyte beds which formerly served as predation refuge. 4. Our results suggest that, despite considerable environmental instability and the absence of specialised zooplanktivores, top-down control of fish on large zooplankton is important in Lake Naivasha. Predation pressure from fish has led to clear-cut shifts in local Daphnia species composition, but failed to drive the larger taxa to extinction. [source] Influence of cutting regime and fertilizer application on the botanical composition, yield and nutritive value of herbage of wet grasslands in Central EuropeGRASS & FORAGE SCIENCE, Issue 4 2009Abstract The changes in dry matter (DM) yield, botanical composition and nutritive value of herbage to ruminants of two wet grasslands, Arrhenatherum elatius grassland (Experiment 1) and a Molinia caerulea fen meadow (Experiment 2), in which a range of cutting and fertilizer treatments were imposed in 1999, were assessed after 4,7 years of treatment imposition. Both experiments had a split-plot design with four replicates. In Experiment 1 the three main-plot cutting treatments were two cuts with a delayed first cut, three cuts and four cuts during the growing season of each year. In Experiment 2 the cutting treatments were two cuts with a traditional harvest time, two cuts with a delayed first cut and three cuts. The four sub-plot fertilizer treatments were an unfertilized control, application of a phosphorus and potassium (PK) fertilizer, application of a nitrogen (N) and PK fertilizer to the first cut only (N1PK) and application of PK plus N applied to each of two, three or four cuts (NcPK). Application of fertilizer influenced yield and botanical composition of herbage more than the cutting treatments while the opposite occurred for nutritive value of the herbage. Application of fertilizer increased the proportion of tall grasses in Experiment 1 and forbs in Experiment 2. The proportion of Equisetum palustre, present only in Experiment 1, was reduced from 0·33 to less than 0·01 by increased cutting frequency together with the NPK fertilizer treatments. In Experiment 1 diversity of vascular plants was negatively affected only by the four-cuts treatment while on both wet grasslands other cutting and fertilizer application treatments had no effect. Changes in DM yield of herbage caused by the cutting and fertilizer application treatments were similar for both vegetation types with DM yield increased significantly by fertilizer application but only slightly or not reduced by increasing the cutting frequency. Nutritive value of herbage was positively correlated with cutting frequency and was most influenced at the first cut. [source] Missense mutations of human homeoboxes: A reviewHUMAN MUTATION, Issue 5 2001Angela V. D'Elia Abstract The homeodomain (encoded by the homeobox) is the DNA-binding domain of a large variety of transcriptional regulators involved in controlling cell fate decisions and development. Mutations of homeobox-containing genes cause several diseases in humans. A variety of missense mutations giving rise to human diseases have been described. These mutations are an excellent model to better understand homeodomain molecular functions. To this end, homeobox missense mutations giving rise to human diseases are reviewed. Seventy-four independent homeobox mutations have been observed in 17 different genes. In the same genes, 30 missense mutations outside the homeobox have been observed, indicating that the homeodomain is more easily affected by single amino acids changes than the rest of the protein. Most missense mutations have dominant effects. Several data indicate that dominance is mostly due to haploinsufficiency. Among proteins having the homeodomain as the only DNA-binding domain, three "hot spot" regions can be delineated: 1) at codon encoding for Arg5; 2) at codon encoding for Arg31; and 3) at codons encoding for amino acids of recognition helix. In the latter, mutations at codons encoding for Arg residues at positions 52 and 53 are prevalent. In the recognition helix, Arg residues at positions 52 and 53 establish contacts with phosphates in the DNA backbone. Missense mutations of amino acids that contribute to sequence discrimination (such as those at positions 50 and 54) are present only in a minority of cases. Similar data have been obtained when missense mutations of proteins possessing an additional DNA-binding domain have been analyzed. The only exception is observed in the POU1F1 (PIT1) homeodomain, in which Arg58 is a "hot spot" for mutations, but is not involved in DNA recognition. Hum Mutat 18:361,374, 2001. © 2001 Wiley-Liss, Inc. [source] Primitive complement system of invertebratesIMMUNOLOGICAL REVIEWS, Issue 1 2004Masaru Nonaka Summary:, Most components of the human complement system have unmistakable domain architectures, making evolutionary tracing feasible. In contrast to the major genes of the adaptive immune system, which are present only in jawed vertebrates, complement component genes with unique domain structures are present not only in jawed vertebrates but also in jawless fish and non-vertebrate deuterostomes. Recent progress in genome analysis in several eukaryotes, occupying the phylogenetically critical positions, showed that most individual domains found in the complement components are metazoa specific, being found both in deuterostomes and in protostomes but not in yeast or plant. However, unique domain architecture of complement components is not present in protostomes, suggesting that the complement system has been established in the deuterostome lineage not by invention of new domains but by innovation of unique combination of the pre-existing domains. The recently assembled Ciona intestinalis draft genome contained the most modular complement genes, except for factor I. However, some possible C. intestinalis complement components show critical structural divergence from the mammalian counterparts, casting doubt on their mutual interaction. Thus, another integrative step seems to have been required to establish the modern complement system of higher vertebrates. [source] Activity and sequence characterization of two cysteine proteases in the digestive tract of the reduviid bug Triatoma infestansINSECT MOLECULAR BIOLOGY, Issue 6 2004A. H. Kollien Abstract Cathepsin B- and cathepsin L-like activities were identified in gut extracts of the blood-sucking bug Triatoma infestans using specific substrates and inhibitors. Activities decreased during the first 2 days after feeding but increased to a maximum value at 5 and 10 days post feeding. The deduced 332 and 328 amino acid sequences showed high levels of identity (50,60%) to other insect cathepsin B- and L-like proteases, respectively. The three amino acid residues of the catalytic domain, CHN, and the GCNGG motif were conserved in both cathepsins, but the occluding loop, characterizing B-like cathepsins, was present only in one. ERFNIN and GNFD motifs occurred in the other sequence, defining it as cathepsin L-like. The cathepsin B-like gene was expressed at low, constitutive levels in unfed and fed T. infestans. [source] Modelling of hygro-thermal behaviour and damage of concrete at temperature above the critical point of waterINTERNATIONAL JOURNAL FOR NUMERICAL AND ANALYTICAL METHODS IN GEOMECHANICS, Issue 6 2002D. Gawin Abstract In this paper, a model for the analysis of the behaviour of concrete at temperature largely exceeding critical point of water, is presented. In this temperature range liquid phase, i.e. capillary phase, and gas phase cannot be distinguished and only the latter exists. Consequently, capillary pressure has no more physical meaning above this point and liquid water is present only as physically adsorbed water. In this work, we give a different physical interpretation to the capillary pressure and use it still for the description of the hygrometric state of concrete in the zone, where temperature exceeds the critical point of water. Considerable thermal dilatation of the liquid water and the real behaviour of water vapour close to critical temperature are taken into account. Moreover, a special switching procedure in order to avoid the Stefan-like problem, which subsequently arises, is described and employed in the calculations. Finally, several numerical examples demonstrating the robustness of the adopted solution have been shown. Copyright © 2002 John Wiley & Sons, Ltd. [source] Climate variability and change in the Greater Alpine Region over the last two centuries based on multi-variable analysisINTERNATIONAL JOURNAL OF CLIMATOLOGY, Issue 15 2009Michele Brunetti Abstract An extensive analysis of the HISTALP database is presented with the aim of giving a comprehensive picture of secular climate variability and change in the Greater Alpine Region (GAR, 4,19 E, 43,49 N). The HISTALP database encompasses 242 sites and concerns temperature, pressure, precipitation, cloudiness, sunshine duration, vapour pressure and relative humidity. The analyses are based on four regional mean records representing different GAR low-level areas and on an additional mean record representing high-level locations. The first goal of the paper is to give an overview of the seasonal and annual records for the different variables, aiming to highlight both variability on decadal time scale and long-term evolution. Then it focuses on trend and correlation analysis. Trends are presented both for the period of common data availability for all regional average series and for moving windows that permit studying the trends over a wide range of timescales. Correlations among the different variables are presented both for the regional average series and for their high-pass-filtered versions. The analyses, beside highlighting a warming that is about twice as large as the global trend, also show that the different variables have responded in different ways to this warming and that the mutual interactions linking the different variables are often present only at specific temporal scales and only in parts of the GAR and in defined seasons. In spite of this complex behaviour, which may also be due to some residual inhomogeneities still affecting the data, the analyses give evidence that the HISTALP database has an excellent internal consistency and show that the availability of a multi-variable database turns out to be very useful in order to evaluate the reliability of the reconstruction of each variable and to better understand the behaviour and the mutual interactions of the different variables. Copyright © 2009 Royal Meteorological Society [source] Differential availability/processing of decorin precursor in arterial and venous smooth muscle cellsJOURNAL OF ANATOMY, Issue 3 2006Rafaella Franch Abstract The existence of specific differentiation markers for arterial smooth muscle (SM) cells is still a matter of debate. A clone named MM1 was isolated from a library of monoclonal antibodies to adult porcine aorta, which in vivo binds to arterial but not venous SM cells, except for the pulmonary vein. MM1 immunoreactivity in Western blotting involved bands in the range of Mr 33,226 kDa, in both arterial and venous SM tissues. However, immunoprecipitation experiments revealed that MM1 bound to a 100-kDa polypeptide that was present only in the arterial SM extract. By mass spectrometry analysis of tryptic digests from MM1-positive 130- and 120-kDa polypeptides of aorta SM extract, the antigen recognized by the antibody was identified as a decorin precursor. Using a crude decorin preparation from this tissue MM1 reacted strongly with the 33-kDa polypeptide and this pattern did not change after chondroitinase ABC treatment. In vitro, decorin immunoreactivity was found in secreted grainy material produced by confluent arterial SM cells, although lesser amounts were also seen in venous SM cells. Western blotting of extracts from these cultures showed the presence of the 33-kDa band but not of the high-molecular-weight components, except for the 100-kDa monomer. The 100/33-kDa combination was more abundant in arterial SM cells than in the venous counterpart. In the early phase of neointima formation, induced by endothelial injury of the carotid artery or vein-to-artery transposition, the decorin precursor was not expressed, but it was up-regulated in the SM cells of the media underlying the neointima in both models. Collectively, these data suggest a different processing/utilization of the 100-kDa monomer of proteoglycan decorin in arterial and venous SM cells, which is abolished after vein injury. [source] Inheritance of the F4ab, F4ac and F4ad E. coli receptors in swine and examination of four candidate genes for F4acRJOURNAL OF ANIMAL BREEDING AND GENETICS, Issue 2005P. Python Summary Susceptibility to enterotoxigenic Escherichia coli with fimbriae F4ac is dominantly inherited in the pig. A three-generation pedigree was created to refine the position of F4acR on chromosome 13 comprising 202 pigs: eight parents, 18 F1 and 176 F2 pigs. The 17-point analysis indicates that F4acR lies between Sw207 and S0283. Recombinant offspring specify that the most probable order is Sw207,S0075,F4acR,Sw225,S0283. We observed six phenotypes for the three fimbrial variants F4ab, F4ac and F4ad. The two missing phenotypes F4abR,/F4acR+/F4adR+ and F4abR,/F4acR+/F4adR, indicate that pigs susceptible to F4ac are always susceptible to F4ab. Furthermore, a weak and a strong adhesion of F4ab and F4ad bacteria was observed. The weak receptor F4abR (F4abRw) was present only in pigs devoid of the receptor F4acR (F4abR+/F4acR,). In contrast, in pigs with the phenotype F4abR+/F4acR+, F4ab bacteria adhered to the majority of enterocytes. F4abRw constitutes a frequently observed phenotype whose inheritance is still unclear. Strong adhesion of F4ab and F4ac bacteria is most likely influenced by the same receptor that we name F4bcR. The number of F4ad bacteria that adhered to enterocytes was very variable in the adhesion test. Moreover, expression of F4adR was independent of age. Our segregation analyses indicated a dominant inheritance of F4adR, although the number of susceptible pigs was smaller than expected. We examined four genes as candidates for the F4acR locus: the transferrin receptor gene (TFRC) and three genes members of the glucosyl/galactosyltransferase family (B3GnT5, B3GALT3 and B4GALT4). Comparison of sequences from resistant and homozygous susceptible F4ac pigs did not reveal any causative single nucleotide polymorphism in the four genes. Two silent mutations at the positions 295 (C/T) and 313 (T/C) in B3GALT3 were found. Using the somatic cell hybrid panel, B3GnT5 and B3GALT3 were assigned to the chromosomal region SSC13q23-q41. No mutations were found in the cDNA sequences of these genes associated with the F4acR genotypes. [source] Ecophysiological attributes of a Lactobacillus sp. and a Pseudomonas sp. on sterile beef fillets in relation to storage temperature and film permeabilityJOURNAL OF APPLIED MICROBIOLOGY, Issue 5 2001E. Tsigarida Aims:,To determine the combined effect of packaging film and temperature on the rate and type of end-products caused by the growth of two main contrasting prevailing organisms in air and 100% CO2, Pseudomonas sp. and Lactobacillus sp., respectively. Methods and Results:,Pseudomonas sp. and Lactobacillus sp. were inoculated individually on sterile meat fillets. The samples were packed in air or 100% CO2, using a high and a low permeable film, and stored at 0 and 10°C. Pseudomonas sp. grew aerobically and in 100% CO2 using high permeable film at both storage temperatures, while film permeability significantly affected the growth of Lactobacillus sp. only at 10°C. Enzymatic kits and HPLC and GC analysis were used to determine the chemical changes of the samples throughout storage. Pseudomonas sp. presented a greater rate of consumption of glucose and lactate than Lactobacillus sp. in samples stored aerobically or with high permeable film. Propanol-1 and two unidentified organic acids were present only in samples inoculated with Pseudomonas sp., while acetaldehyde, ethanol, diacetyl and acetoin were detected in samples inoculated with Lactobacillus sp. Conclusions:,Since different microbial species and introduction of new packaging methods affect spoilage reactions of meat either qualitatively or quantitatively, a combination of several chemical indicators should be thoroughly investigated. Significance and Impact of the Study:,The present study provides information on how and when such potential indicators can be exploited for the benefit of the industry and consumer. [source] A Comparison of Hindsight Bias in Groups and Individuals: The Moderating Role of PlausibilityJOURNAL OF APPLIED SOCIAL PSYCHOLOGY, Issue 2 2010Dong-Won Choi We compared the magnitude of the hindsight bias in individuals and groups with the prediction that the plausibility of an outcome would affect the magnitude of the group,individual difference. We provided groups and individuals with outcomes of scientific studies, and asked them to predict the probability of those outcomes as if they did not know the given outcomes and to report their level of surprise at the outcomes. Overall, groups were more prone to hindsight bias than were individuals, but the group,individual difference was present only when the given outcomes were relatively implausible (Study 1). Moreover, this difference was not eliminated even when participants were asked to consider alternative outcomes (Study 2). Implications are discussed. [source] Effect of a chemical synthesis-based pharmaceutical wastewater on performance, acetoclastic methanogenic activity and microbial population in an upflow anaerobic filterJOURNAL OF CHEMICAL TECHNOLOGY & BIOTECHNOLOGY, Issue 6 2002B Kasapgil Ince Abstract The performance of an upflow anaerobic filter (UAF) treating a chemical synthesis-based pharmaceutical wastewater was evaluated under various operating conditions. During start-up, the UAF was initially fed by glucose till an organic loading rate (OLR) of approximately 7.5,kg COD m,3 day,1 with a hydraulic retention time of 2.3 days. A soluble COD removal efficiency of 98% was achieved before the addition of the wastewater. Initially, the filter inertia was acclimatized to the wastewater by sequential feeding of 10% (w/v), 30% (w/v) and 70% (w/v) of the pre-aerated wastewater mixed with glucose followed by a 100% (w/v) pre-aerated wastewater. During the operation, the COD removal efficiency and methane yield decreased to 75% and 0.30,m3 CH4,kg,1 CODremoved respectively. As the UAF became accustomed to the pre-aerated wastewater, raw wastewater was fed in increasing ratios of 20% (w/v), 60% (w/v) and 80% (w/v) with the pre-aerated wastewater as the remaining part. During this stage of the operation, a COD removal efficiency in a range of 77,86% was achieved and the methane yield decreased to 0.24,m3 CH4,kg,1 CODremoved. Finally, 100% (w/v) raw wastewater was fed and a COD removal efficiency of 65% was achieved with a methane yield of 0.20,m3 CH4,kg,1 CODremoved. At the end of the operation, acetoclastic methanogenic activity was only measured in the bottom section of the UAF, this showed a 90% reduction in comparison with activity of inoculation sludge. Microscopic examinations revealed that rod-shaped methanogens remained as the dominant species whereas Methanosarcina -like species and filaments were present only in insignificant numbers along the UAF. © 2002 Society of Chemical Industry [source] | |||||||||||||||||||||||||||||||||||||||||||