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Population Variation (population + variation)

Distribution by Scientific Domains

Life Sciences	66%
Medical Sciences	10%
Earth and Environmental Science	6%

Selected Abstracts

Population variation in Persicaria salicifolia (Brouss. ex Willd.) Assenov (Polygonaceae) in Nigeria

FEDDES REPERTORIUM, Issue 7-8 2002
A. E. Ayodele Dr.
Study of six living population samples and herbarium specimens of Persicaria salicifolia from Nigeria revealed considerable variability in vegetative and floral characters. Two subspecies, one of which is a new one (subsp. nova, p. 516), are recognised. Experimental cultivation showed that the combination of distinguishing characters for each subspecies remains intact under uniform conditions in the botanical nursery. Variabilität der Population von Persicaria salicifolia (Brouss. ex Willd.) Assenov (Polygonaceae) in Nigeria Studien an sechs lebenden Populationsproben und Herbar-Proben von Persicaria salicifolia aus Nigeria erbrachten eine beachtliche Variabilität der vegetativen und floralen Eigenschaften. Zwei Unterarten, eine von ihnen neu (subsp. nova) wurden verzeichnet. Kulturversuche zeigten, dass die Kombination der kennzeichnenden Merkmale jeder Unterart unter gleichen Bedingungen in einer botanischen Anzucht unverändert bleiben. [source]

Skeletal Estimation and Identification in American and East European Populations,

JOURNAL OF FORENSIC SCIENCES, Issue 3 2008
Erin H. Kimmerle Ph.D.
Abstract:, Forensic science is a fundamental transitional justice issue as it is imperative for providing physical evidence of crimes committed and a framework for interpreting evidence and prosecuting violations to International Humanitarian Law (IHL). The evaluation of evidence presented in IHL trials and the outcomes various rulings by such courts have in regard to the accuracy or validity of methods applied in future investigations is necessary to ensure scientific quality. Accounting for biological and statistical variation in the methods applied across populations and the ways in which such evidence is used in varying judicial systems is important because of the increasing amount of international forensic casework being done globally. Population variation or the perceived effect of such variation on the accuracy and reliability of methods is important as it may alter trial outcomes, and debates about the scientific basis for human variation are now making their way into international courtrooms. Anthropological data on population size (i.e., the minimum number of individuals in a grave), demographic structure (i.e., the age and sex distribution of victims), individual methods applied for identification, and general methods of excavation and trauma analysis have provided key evidence in cases of IHL. More generally, the question of population variation and the applicability of demographic methods for estimating individual and population variables is important for American and International casework in the face of regional population variation, immigrant populations, ethnic diversity, and secular changes. The reliability of various skeletal aging methods has been questioned in trials prosecuted by the International Criminal Tribunal for the Former Yugoslavia (ICTY) in The Prosecutor of the Tribunal against Radislav Krsti, (Case No. IT-98-33, Trial Judgment) and again in the currently ongoing trial of The Prosecutor of the Tribunal against Zdravko Tolimir, Radivolje Mileti,, Milan Gvero, Vinko Pandurevi,, Ljubisa Beara, Vujadin Popovi,, Drago Nikoli,, Milorad Trbi,, Ljubomir Borovcanin (IT-05-88-PT, Second Amended Indictment). Following the trial of General Krsti,, a collaborative research project was developed between the Forensic Anthropology Center at The University of Tennessee (UT) and the United Nations, International Criminal Tribunal for the Former Yugoslavia, Office of the Prosecutor (ICTY). The purpose of that collaboration was to investigate methods used for the demographic analysis of forensic evidence and where appropriate to recalibrate methods for individual estimation of age, sex, and stature for specific use in the regions of the former Yugoslavia. The question of "local standards" and challenges to the reliability of current anthropological methods for biological profiling in international trials of IHL, as well as the performance of such methods to meet the evidentiary standards used by international tribunals is investigated. Anthropological methods for estimating demographic parameters are reviewed. An overview of the ICTY-UT collaboration for research aimed at addressing specific legal issues is discussed and sample reliability for Balkan aging research is tested. The methods currently used throughout the Balkans are discussed and estimated demographic parameters obtained through medico-legal death investigations are compared with identified cases. Based on this investigation, recommendations for improving international protocols for evidence collection, presentation, and research are outlined. [source]

Brief communication: Population variation in human maxillary premolar accessory ridges (MxPAR)

AMERICAN JOURNAL OF PHYSICAL ANTHROPOLOGY, Issue 2 2010
Scott E. Burnett
Abstract The purpose of this brief communication is to report the results of an analysis of maxillary premolar accessory ridges (MxPAR), a common but understudied accessory ridge that may occur both mesial and distal to the central ridge of the buccal cusp of upper premolars. We developed a new five-grade scoring plaque to better categorize MxPAR variation. Subsequently, we conducted a population analysis of MxPAR frequency in 749 dental casts of South African Indian, American Chinese, Alaskan Eskimo, Tohono O'odham (Papago), Akimel O'odham (Pima), Solomon Islander, South African Bantu, and both American and South African Whites. Northeast Asian and Asian-derived populations exhibited the highest MxPAR frequencies while Indo-European samples (South African Indians, American and South African Whites) exhibited relatively low frequencies. The Solomon Islanders and South African Bantu samples exhibited intermediate frequencies. Our analysis indicates that statistically significant differences in MxPAR frequency exist between major geographic populations. As a result, the MxPAR plaque has now been added to the Arizona State University Dental Anthropology System, an important contribution as maxillary premolar traits are underrepresented in analyses of dental morphology. Am J Phys Anthropol 2010. © 2009 Wiley-Liss, Inc. [source]

Dialects in pygmy marmosets?

AMERICAN JOURNAL OF PRIMATOLOGY, Issue 4 2009
Population variation in call structure
Abstract Population variation in primate vocal structure has been rarely observed. Here, we report significant population differences in the structure of two vocalizations in wild pygmy marmosets (Trills and J calls). We studied 14 groups of pygmy marmosets Callithrix (Cebuella) pygmaea pygmaea from five populations in northeastern Ecuador. We analyzed the acoustic structure of Trills and J calls recorded from two adult animals in each group through focal samples. Although individuals and groups within a population differed in call structure, we found consistent structural differences at a population level for Trills and J calls. Pair-wise comparisons for the two call types point to San Pablo and Amazoonico as the populations that differed the most, whereas Hormiga and Zancudococha showed the least differences. Discriminant function analysis indicates that calls from each population could be classified accurately at rates significantly above chance. Habitat acoustics, social factors and genetic drift may explain interpopulation vocal differences. This is the first evidence of within-subspecies vocal differences, or dialects, in wild populations of a neotropical primate species. Am. J. Primatol. 71:333,342, 2009. © 2009 Wiley-Liss, Inc. [source]

A method to establish the relationship between chronological age and stage of union from radiographic assessment of epiphyseal fusion at the knee: an Irish population study

JOURNAL OF ANATOMY, Issue 2 2008
J. E. O'Connor
Abstract Characteristic changes during epiphyseal union provide a skeletal age, which when compared with age-based standards provides an estimation of chronological age. Currently there are no data on epiphyseal union for the purposes of age estimation specific to an Irish population. This cross-sectional study aims to investigate the relationship between stage of epiphyseal union at the knee joint and chronological age in a modern Irish population. A novel radiographic method that sub-divides the continuum of development into five specific stages of union is presented. Anteroposterior and lateral knee radiographs of 148 males and 86 females, aged 9,19 years, were examined. Fusion was scored as Stage 0, non-union; Stage 1, beginning union; Stage 2, active union; Stage 3, recent union; or Stage 4, complete union. Stage of epiphyseal union is correlated with chronological age in both males and females. Mean age gradually increases with each stage of union and also varies between male and female subjects. A statistically significant difference in mean age was recorded between stages when compared to the previous stage, for the three epiphyses. Irish children are comparable to those from previously published studies with epiphyseal union in females occurring earlier than males. A significant difference was noted between the mean age of union for males and females for each of Stages 1 and 2 for the femur and Stages 0, 1, 2 and 3 for the tibia and the fibula. The results also suggest that the stages of union occur at earlier ages in this Irish population. Implementation of standardized methodology is necessary to investigate if this is due to a secular or population variation in maturation or to a methodology which clearly identifies five stages of union. [source]

Genetic and morphometric characterization of a local Vietnamese Swamp Buffalo population

JOURNAL OF ANIMAL BREEDING AND GENETICS, Issue 1 2010
C. Berthouly
Summary The water buffalo plays a key role in the socio-economy of South-East Asia as it is the main draught power for paddy rice cultivation. While in the Indian subcontinent the water buffalo is the riverine type, in South-East Asia the majority of buffaloes are of the swamp type. In the poor remote northern province of Ha Giang in Vietnam, improvement of the swamp buffalo breed may be one of the best ways to increase sustainability of farming systems. Therefore, analysis of the genetic structure of the province buffalo population is a prerequisite to any conservation or improvement project. A total of 1122 animals were described for 11 body and horn measurements for morphometric characterization. From this sample set, 744 animals were genotyped for 17 microsatellite markers. Also 17 animals from southern provinces of Vietnam were genotyped as a comparative sample. The results showed that genetic diversity as well as inbreeding value in the Ha Giang was high. The FST values within the province and across Vietnam were low indicating that most of the population variation is explained by individual variability. Bayesian clustering analysis did not highlight the presence of subdivided populations. These results are useful for the implementation of a conservation and improvement strategy of the swamp buffalo in order to guarantee the householders' needs for sustainability of the farming system in the Ha Giang province. [source]

Diversity in five goat populations of the Lombardy Alps: comparison of estimates obtained from morphometric traits and molecular markers

JOURNAL OF ANIMAL BREEDING AND GENETICS, Issue 3 2001
P. Crepaldi
Phenotypic and genetic variability were studied within and between the goat populations of Bionda dell'Adamello, Frisa, Orobica, Verzaschese and Val di Livo. These are populations reared for most of the year on pastures of the Lombardy Alps, numbering a minimum of 1000 and a maximum of 8000 individuals per breed. The first four are standardized breeds of recent formation; at present they are supported by the European Union measures for the conservation of rare breeds. On the basis of its visible genetic profile the Val di Livo goat may be classified as a primary population. Phenotypic variability was estimated on the basis of six somatic measurements on 60,140 adult goats per breed, whereas genetic variation was measured on the basis of 201 AFLP loci. The partition of the total molecular variation into the within and between breed components indicates that the majority of the molecular variability is conserved within populations, whereas only 8.8% can be attributed to between population variation. Morphometric and molecular marker data produced unrelated distance values and different topology of UPGMA clusters. It may be hypothesized that the morphometric originality of the Val di Livo goat is mostly determined by environmental factors and selection pressure rather than by different origin and genome evolution. Conversely Orobica seems to have diverged from the other breeds at the genome level, which may be explained by an undocumented Southern Italian origin. An objective evaluation of conservation priorities may in the near future be based on the integrated use of molecular markers and of information on quantitative traits and allelic variation with adaptive relevance. Diversité dans cinq populations de chèvres des Alpes lombardes: comparaisons entre estmations obtenues par des mesures somatiques et par des marqueurs moléculaires On a etudié la variabilité phénotypique et génétique entre et parmi les populations de chèvres Bionda dell'Adamello, Frisa, Orobica, Verzaschese et Val di Livo. Il s'agit de populations qui content entre 1000 et 8000 sujets, elevés pour la plus part de l'année sur les pâturages des Alpes de Lombardie. Les quatre premières, actuellement sauvegardées par des mesures communautaires, sont des races à standard recemment constituées. La chèvre de la Val di Livo peut être rangée parmi les races primaires. La diversité phénotypique a été montrée par un dendrogramme obtenus des distances euclidiennes calculées à partir de six mesures somatiques qui avaient été prises sur 60,140 chèvres adultes pour chaque race. La diversité génétique a été montrée par un dendrogramme bâti sur la matrice des distances de Nei obtenues des 201 marqueurs moléculaires AFLP, produits par 7 combinaisons de primers, sur 30 sujets pour chaque race. La décomposition de la variabilité génétique totale estimée par les données moléculaires a montré que la plus part de la variabilité est conservée parmi la population, tandis que seulement l,8,8% peut être imputé aux différences entre populations. Les données moléculaires et somatiques ont donné lieu à des distances qui ne sont pas corrélées et à des cluster avec une topologie nettement différente. La comparaison entre les deux approches permet d'avancer l'hypothèse que l'originalité somatique de la chèvre de la Val di Livo pourrait être due à des facteurs d'environnement et/ou à la pression de sélection plutôt qu'à des facteurs liés à l'évolution du genome. Au contraire ces derniers seraient responsables de l'originalité génétique de la race Orobica et confirmeraient des témoignages orals non documentés. Un choix objectif des ressources génétiques qui méritent d'être conservées pourra probablement se baser sur l'employ conjoint des marqueurs et de renseignements sur les caractères quantitatifs et sur les variantes alléliques des gènes qui ont une valeur adaptative. Diversität in fünf Ziegenpopulationen der lombardischen Alpen: Vergleich von Schätzungen auf der Basis morphologischer Eigenschaften und molekularer Marker Es wurden die phänotypische und genetische Variabilität innerhalb und zwischen Bionda dell'Adamello, Frisa, Orobica, Verzaschese und Val di Livo Ziegenpopulationen untersucht. Diese Populationen, mit Größen zwischen 1000 und 8000 Tieren, werden den größten Teil des Jahres auf Weiden der lombardischen Alpen gehalten. Die vier erstgenannten Populationen sind erst kürzlich standardisierte Rassen; gegenwärtig werden sie mit EU-Mitteln für die Erhaltung seltener Rassen, unterstützt. Auf der Basis des erkennbaren genetischen Profils muß die Rasse Val di Livo als eine Primärpopulation eingeordnet werden. Phänotypische Variabilität wurde auf der Basis von sechs Körpermaßen an 60,140 ausgewachsenen Ziegen je Rasse geschätzt, die genetische Variation wurde auf der Basis von 201 AFLP-Loci gemessen. Die Aufteilung der gesamten molekularen Varianz in Varianzkomponenten innerhalb und zwischen Populationen zeigt, daß der größte Teil der molekularen Variabilität innerhalb der Populationen auftritt, und nur 8,8% der Gesamtvarianz auf die Varianz zwischen den Populationen entfällt. Morphologische und molekulare Marker erzeugten unabhängige Distanzwerte und unterschiedliche upgma-Cluster. Es kann die Hypothese aufgestellt werden, daß die morphologische Einzigartigkeit der Val di Livo Ziege stärker auf Umwelteffekte und Selektionsdruck als auf eine unterschiedliche Herkunft oder genomische Evolution zurückzuführen ist. Dagegen scheint Orobica auf Genomebene von den anderen Rassen abzuweichen, was durch einen nicht dokumentierten süditalienischen Ursprung erklärt werden könnte. Eine objektive Bewertung von Prioritäten für Konservierungsmaßnahmen dürfte in Zukunft auf einen integrierten Gebrauch molekularer Marker, Informationen über quantitative Merkmale sowie der genetischen Variation bezüglich der Adaptationsfähigkeit basieren. [source]

Behavioural syndromes differ predictably between 12 populations of three-spined stickleback

JOURNAL OF ANIMAL ECOLOGY, Issue 6 2007
NIELS J. DINGEMANSE
Summary 1Animals often differ in suites of correlated behaviours, comparable with how humans differ in personality. Constraints on the architecture of behaviour have been invoked to explain why such ,behavioural syndromes' exist. From an adaptationist viewpoint, however, behavioural syndromes should evolve only in those populations where natural selection has favoured such trait covariance, and they should therefore exist only in particular types of population. 2A comparative approach was used to examine this prediction of the adaptive hypothesis. We measured behavioural correlations in 12 different populations of three-spined stickleback (Gasterosteus aculeatus) and assessed whether they indeed varied consistently according to the selective environment, where population was unit of analysis. 3For a sample of fry from each population, we measured five different behaviours within the categories of (i) aggression (towards conspecifics); (ii) general activity; and (iii) exploration,avoidance (of novel foods, novel environments and altered environments). 4We show that behavioural syndromes are not always the same in different types of stickleback population: the often-documented syndrome between aggressiveness, activity and exploratory behaviour existed only in large ponds where piscivorous predators were present. In small ponds where predators were absent, these behaviours were not (or only weakly) associated. 5Our findings imply that population variation in behavioural syndromes does not result from stochastic evolutionary processes, but may result instead from adaptive evolution of behaviour favouring what should prove to be optimal trait combinations. [source]

Population stability in salmon species: effects of population size and female reproductive allocation

JOURNAL OF ANIMAL ECOLOGY, Issue 5 2003
Sigurd Einum
Summary 1Population stability (i.e. level of temporal variation in population abundance) is linked commonly to levels of environmental disturbances. However, populations may also differ in their propensity to dampen or amplify the effects of exogenous forces. Here time-series of population estimates were used to test for such differences among 104 populations of six salmon species. 2At the species level, Atlantic (Salmo salar L.), chinook (Oncorhynchus tshawytscha Walbaum) and coho salmon (O. kisutch W) were less variable than sockeye (O. nerka W) and pink salmon (O. gorbuscha W). Chum salmon (O. keta W) was more similar to sockeye and pink salmon. These differences may be related in part to differences in body size, and hence susceptibility to adverse environmental conditions, at the time when they migrate to the sea or lakes. 3At the population level no effect of fecundity on variability was found, in contrast to findings for marine fishes, nor of egg size. Whereas substantial differences in the temporal stability of environmental factors among geographically close populations may over-ride any effects of fecundity or egg size in fresh water, this is less likely in the marine environment where spatial autocorrelations of environmental variability are more pronounced. 4Variation in population sizes was related positively to the duration of time-series when using standard deviations of ln-transformed population estimates, and also when using linearly detrended population variation, suggesting non-linear long-term abundance trends in salmon populations that extend beyond the 7-year period of the shortest time-series. 5When controlling for differences among species, stability increased with increasing population size, and it is hypothesized that this is due to large populations having a more complex spatial and genetic structure than small populations due to wider spatial distribution. The effects of population size on stability, as well as differences in stability among species, suggest that population- and organism-specific characteristics may interact with exogenous forces to shape salmon population dynamics. [source]

The influence of urea feeding on the bacterial and archaeal community in the forestomach of collared peccary (Artiodactyla, Tayassuidae)

JOURNAL OF APPLIED MICROBIOLOGY, Issue 5 2009
E.G. Oliveira
Abstract Aims:, This study was carried out to test whether bacterial and archaeal populations, and products of fermentation in each compartment of collared peccary stomach, vary significantly with urea feeding. Bacteria and archaeal population variation among the four stomach compartments were also compared. Methods and Results:, Archaeal and bacterial communities in the forestomach of four individuals per treatment , peccaries fed diets with and without urea , were analysed at molecular level using PCR followed by denaturing gradient gel electrophoresis. Volatile fatty acids profiles in the three different compartments of the forestomach were also compared. The bacterial community composition varied considerably among each compartment and with urea provision, but no variation was observed between archaeal populations. Differences in bacterial communities between treatments , with and without urea , were greater than amongst stomach compartments. The acetate: propionate proportion decreased with urea provision in diet. Some differences in bacterial but not archaeal community composition were observed in each compartment of the collared peccary forestomach. Conclusions:, There are some differences in bacterial but not archaeal populations in each compartment of collared peccary stomach. Use of urea in the diet of peccary can substantially modify the profile of volatile fatty acids released in its forestomach, but does not influence the archaeal community composition. Urea has an important effect on bacterial population DGGE profile present in the peccary's forestomach. Significance and Impact of the Study:, These results demonstrate the ability of the collared peccary to use urea as source of nonprotein nitrogen, and confirm a hypothesis that the collared peccary has a digestive physiology more similar to ruminant than nonruminant animals. [source]

Sensitivity of comparative analyses to population variation in trait values: clutch size and cavity excavation tendencies

JOURNAL OF AVIAN BIOLOGY, Issue 4 2000
Mikko Mönkkönen
Importance of within-species (population) variation in trait values to correlations of traits among species has received very little attention in comparative analyses. We use randomization and bootstrapping techniques to provide a sensitivity analysis of the influence of population variation on correlations between clutch size and propensity to excavate. These traits are predicted to be negatively correlated under the limited breeding opportunities hypothesis, but opposing results have been found by two studies using different population estimates for western Palearctic Paridae. Our analyses support the limited breeding opportunities hypothesis and suggest low sensitivity to within-species variation in trait values. Yet, a small proportion of population data provide non-significant results. Checking for the effects of this variation on the postulated association between traits is necessary in comparative studies if one wishes to avoid type I and type II errors. [source]

Incipient speciation of Catostylus mosaicus (Scyphozoa, Rhizostomeae, Catostylidae), comparative phylogeography and biogeography in south-east Australia

JOURNAL OF BIOGEOGRAPHY, Issue 3 2005
Michael N Dawson
Abstract Aim, Phylogeography provides a framework to explain and integrate patterns of marine biodiversity at infra- and supra-specific levels. As originally expounded, the phylogeographic hypotheses are generalities that have limited discriminatory power; the goal of this study is to generate and test specific instances of the hypotheses, thereby better elucidating both local patterns of evolution and the conditions under which the generalities do or do not apply. Location, Coastal south-east Australia (New South Wales, Tasmania and Victoria), and south-west North America (California and Baja California). Methods, Phylogeographic hypotheses specific to coastal south-east Australia were generated a priori, principally from existing detailed distributional analyses of echinoderms and decapods. The hypotheses are tested using mitochondrial cytochrome c oxidase subunit I (COI) and nuclear internal transcribed spacer 1 (ITS1) DNA sequence data describing population variation in the jellyfish Catostylus mosaicus, integrated with comparable data from the literature. Results, Mitochondrial COI distinguished two reciprocally monophyletic clades of C. mosaicus (mean ± SD: 3.61 ± 0.40% pairwise sequence divergence) that were also differentiated by ITS1 haplotype frequency differences; the boundary between the clades was geographically proximate to a provincial zoogeographic boundary in the vicinity of Bass Strait. There was also limited evidence of another genetic inhomogeneity, of considerably smaller magnitude, in close proximity to a second hypothesized zoogeographic discontinuity near Sydney. Other coastal marine species also show genetic divergences in the vicinity of Bass Strait, although they are not closely concordant with each other or with reported biogeographic discontinuities in the region, being up to several hundreds of kilometres apart. None of the species studied to date show a strong phylogeographic discontinuity across the biogeographic transition zone near Sydney. Main conclusions, Patterns of evolution in the Bass Strait and coastal New South Wales regions differ fundamentally because of long-term differences in extrinsic factors. Since the late Pliocene, periods of cold climate and low sea-level segregated warm temperate organisms east or west of an emergent Bassian Isthmus resulting in population divergence and speciation; during subsequent periods of warmer and higher seas, sister taxa expanded into the Bass Strait region leading to weakly correlated phylogeographic and biogeographic patterns. The Sydney region, by contrast, has been more consistently favourable to shifts in species' ranges and long-distance movement, resulting in a lack of intra-specific and species-level diversification. Comparisons between the Sydney and Bass Strait regions and prior studies in North America suggest that vicariance plays a key role in generating coastal biodiversity and that dispersal explains many of the deviations from the phylogeographic hypotheses. [source]

Vernalization requirement of wild beet Beta vulgaris ssp. maritima: among population variation and its adaptive significance

JOURNAL OF ECOLOGY, Issue 4 2002
Pierre Boudry
Summary 1Seven populations of Beta vulgaris ssp. maritima (wild beet) situated along a latitudinal cline were studied for their vernalization requirement and its consequences for fitness. 2Various cold regimes were applied in glasshouses and experimental gardens with plants of different ages. Three additional experimental sites (on the French Mediterranean, Atlantic and North Sea coasts) situated near three of the sampled populations, and thus including a reciprocal transplant design, were used to evaluate the influence of latitude under natural conditions. Survival and plant size were measured over 3 years. 3The vernalization requirement was greater in plants from more northern origins. The level of cold required to allow flowering overcompensated for the colder springs, so that northern plants in northern sites flowered less than southern plants in southern sites. 4Young seedlings were more difficult to vernalize than plants that had already developed vegetative rosettes. 5Differences in vernalization requirement seem to be an adaptive response to spring temperatures and season length in a particular latitude. A whole winter vernalization almost always led to flowering in the subsequent year whatever the latitude or geographical origin. 6Plants from the Atlantic and Channel coasts showed the highest lifetime reproductive success at all sites. Southern populations were better adapted to disturbed habitats as shown by their higher first-year reproductive success. The North Sea population had a lower reproductive success than the Atlantic populations, even in its native environment. [source]

Fish mitochondrial genomics: sequence, inheritance and functional variation

JOURNAL OF FISH BIOLOGY, Issue 2 2008
K. H. Brown
Mitochondrial genomic research currently primarily focuses on the analysis and understanding of how mitochondrial mutations produce detrimental phenotypes in humans. Reasons for this focus on negative impacts include the large number of human diseases that are known to result from specific mitochondrial genomes, and the long held belief that mitochondria change only through the accumulation of mutations due to its clonal, maternal inheritance. Recent studies are beginning to challenge these preconceptions and have shown that mitochondrial genomes can have significant positive impacts. Although the number of studies using fishes as models in mitochondrial research is limited, many fish model species provide excellent opportunity for furthering the understanding of mitochondrial genomes, their interactions with the nuclear genome, the potential for understanding the mechanisms of how functional variation effects organisms and how selection for positive functional variation effects population variation. [source]

Skeletal Estimation and Identification in American and East European Populations,

Application of Three Dental Methods of Adult Age Estimation from Intact Single Rooted Teeth to a Peruvian Sample

JOURNAL OF FORENSIC SCIENCES, Issue 3 2008
Douglas H. Ubelaker Ph.D.
Abstract:, Methods of estimating adult age at death from such dental features as root translucency, root length, and the extent of periodontosis in intact single rooted teeth have proven useful in studies of modern individuals, especially in estimating age in older adults. Questions remain however, concerning the impact of regional and population variation on accuracy. To examine this issue, three approaches to age estimation were applied to a diverse sample of 100 individuals from Peru. Mean errors of estimation for all three approaches were similar to those originally reported, suggesting minimal impact of population variation of the features measured. A new regression equation, specifically for Peruvian samples, is provided. [source]

Within population variation and interrelationships between morphology, nutritional content, and secondary compounds of Rhamnus alaternus fruits

NEW PHYTOLOGIST, Issue 2 2002
Ido Izhaki
Summary ,,We studied within-species variation in and interrelations among morphological and chemical traits of ripe Mediterranean buckthorn ( Rhamnus alaternus ) fruit, a bird-dispersed species. ,,Principal component analysis revealed that larger fruits tended to be relatively rich in nonstructural carbohydrates (NSC), water and P but poor in protein and most minerals. Small fruits tended to be relatively rich in protein, structural carbohydrates, K and Zn while intermediate size fruits tended to be rich in lipids, Mg and Ca. Variation in chemical traits (organic compounds and minerals) was typically much higher than in morphological traits (e.g. fruit size) with the exception of NSC and water content, which varied little. This discrepancy might be explained by differences in environmental conditions between plant microsites that imposed greater variability on fruit nutrient composition than on fruit-morphological traits; and by lower selective pressure by birds on fruit chemical traits than on morphological traits. ,,Secondary metabolite (emodin) concentration was positively correlated with concentrations of NSC, supporting the nutrient/toxin titration model, which predicts that high levels of secondary metabolites in fruits should be off set by high nutritional rewards for dispersers. ,,Emodin concentration in leaves was much higher than in fruit pulp, which may indicate its differential adaptive roles in seed dispersal and against herbivores. [source]

Within and between population genetic variation for zinc accumulation in Arabidopsis halleri

NEW PHYTOLOGIST, Issue 1 2002
Mark R. Macnair
Summary ,,Hyperaccumulator plants in the field show significant variation in the metal concentration in their aerial parts, but little is known of the causes of this variation. This paper investigates the role of soil zinc (Zn) concentration and genetic variation in causing between and within population variation in Zn accumulation in Arabidopsis halleri. ,,Seed from 17 populations of A. halleri collected in central Europe were grown under standard conditions at three external Zn concentrations and tested for Zn concentration in the leaves. ,,Between population variation was highest at low external zinc concentrations. At 10 µm Zn some plants had very low leaf Zn concentrations, and were indistinguishable from nonaccumulators. However, at higher Zn concentrations, all plants showed hyperaccumulation. There were no differences in the accumulating abilities of populations from sites with different degrees of contamination. ,,Heritability of accumulation, determined for individual families from three populations, was quite high (25,50%), indicating that selection for increased accumulating ability should be possible, although selection would be easier at low external Zn concentrations. The Zn concentration of field collected plants was affected partly by plant genotype but not by the total soil Zn around their roots. [source]

A geometric morphometric approach to the quantification of population variation in sub-Saharan African crania

AMERICAN JOURNAL OF HUMAN BIOLOGY, Issue 1 2010
Daniel Franklin
We report here on new data examining cranial variation in 18 modern human sub-Saharan African populations. Previously, we investigated variation within southern Africa; we now extend our analyses to include a series of Central, East, and West African crania, to further knowledge of the relationships between, and variation and regional morphological patterning in, those populations. The sample comprises 377 male individuals; the three-dimensional coordinates of 96 landmarks are analyzed using Procrustes-based methods. Interpopulation variation is examined by calculating shape distances between groups, which are compared using resampling statistics and parametric tests. Phenotypic variance, as a proxy for genetic variance, is measured and compared across populations. Principal components and cluster analyses are employed to explore relationships between the populations. Shape differences are visualized using three-dimensional rendered models. Observed disparity patterns imply a mix of differences and similarities across populations, with no apparent support for genetic bottlenecks, which is likely a consequence of migrations that may have influenced differences in cranial form; supporting data are found in recent molecular studies. The Pygmy sample had the most distinctive cranial morphology; characteristically small in size with marked prognathism. These features characterized, although less strongly, the neighboring Bateke, and are possibly related to similar selective pressures in conjunction with interbreeding. Small cranial size is also involved in the considerable distinctiveness of the San and Khoikhoi. The statistical procedures applied in this study afford a powerful and robust means of quantifying and visualizing the magnitude and pattern of cranial variation between sub-Saharan African populations. Am. J. Hum. Biol., 2010. © 2009 Wiley-Liss, Inc. [source]

Geometric morphometric study of population variation in indigenous southern African crania

AMERICAN JOURNAL OF HUMAN BIOLOGY, Issue 1 2007
D. Franklin
Much of our understanding of population variation in southern Africa is derived from traditional morphometric research. In the search for new perspectives, this paper reports on new geometric morphometric data examining cranial variation in 12 modern human populations from southern Africa. In total, 298 male Bantu-speaking individuals were studied. In addition, a small Khoisan (Khoikhoi and San) series was also examined. The purpose of this study was to investigate Khoisan-Bantu morphological similarities and differences, and to examine variation within both the Bantu-speaking and Khoisan populations. The three-dimensional coordinates of 96 landmarks were analyzed, using the shape-analysis software morphologika. Interpopulation variation was examined by calculating Procrustes distances between groups; a cluster analysis was then used to summarize phenetic relationships. A principal components analysis explored the relationships between populations; shape differences were visualized and explored using three-dimensional rendered models, and further interpreted using thin-plate splines. Morphological differences are present within and between the crania of Bantu-speaking and Khoisan individuals. The Khoisan demonstrate features (e.g., a pentagonoid vault, more rounded forehead contour, and a small and less prognathic face) that clearly distinguish them from Bantu-speaking populations. Although southern African Bantu-speaking populations are clearly closely related, they show population-specific features (e.g., the crania of more southerly populations (Xhosa, Southern Sotho, and Zulu) are characteristically more brachycephalic and less prognathic). This study suggests that differential admixture with adjacent Khoisan peoples has contributed to diversity within southern African Bantu-speaking populations. Am. J. Hum. Biol. 19:20,33, 2007. © 2006 Wiley-Liss, Inc. [source]

An unexpected wide population variation of the G1733A polymorphism of the androgen receptor gene: Data on the Mediterranean region

AMERICAN JOURNAL OF HUMAN BIOLOGY, Issue 6 2005
E. Esteban
The androgen receptor (AR) has been proposed as a candidate gene for several cancers (breast, prostate, uterine endometrium, colon, and esophagus). Ethnicity is considered an associated risk factor for some of these cancers. Several case-control genetic studies have been focused in samples of the main ethnic groups, but little is known about the distribution of risk polymorphisms in current populations with accurate ethnic and/or geographic origins. The A allele of the G1733A polymorphism of the AR gene has been associated with increased risk of prostate cancer. We provide data from this marker in 12 samples from 7 Mediterranean countries such as Spain, Italy (Sardinia), Greece, Turkey, Morocco, Algeria, and Egypt. A sample from Ivory Coast has also been analyzed. The A allele distribution shows a frequency in the Ivory Coast population (65.17%) that contrasts with the low values found in Northern Mediterraneans (mean average value of 13.98%). North African populations present two-times higher frequencies (average value of 27.19%) than Europeans. The wide population variation range found for the A allele strengthens the potential interest of further screening as a baseline to the design of future preventive and population health programs. Am. J. Hum. Biol. 17:690,695, 2005. © 2005 Wiley-Liss, Inc. [source]

The ontogeny of Holocene and Late Pleistocene human postcranial strength

AMERICAN JOURNAL OF PHYSICAL ANTHROPOLOGY, Issue 1 2010
Libby W. Cowgill
Abstract While a wide variety of studies have focused on population variation in adult cross-sectional properties, relatively little is known about population variation in postcranial robusticity in immature individuals. Furthermore, the age at which the population differences readily detected in adults manifest during growth is also unknown. This research addresses these gaps in our current understanding through the analysis of immature humeral and femoral long bone strength. Cross-sectional geometry was used to compare the developmental trajectories of diaphyseal strength in Late Pleistocene Neandertal and modern human subadults to a sample of immature humans from seven geographically diverse Holocene populations. Population differences in size-standardized cross-sectional properties appear to be systemic and develop very early in ontogeny in the Holocene sample. In many cases, these differences are present before one year of age. In general, the Late Pleistocene fossil samples fit within the range of recent human variation in long bone strength. Population differences detected here are likely related to a combination of factors including activity patterns, genetic propensities, and nutritional status. These results highlight the complex mosaic of processes that result in adult postcranial robusticity, and suggest that further exploration of the developmental interplay between intrinsic and extrinsic influences on skeletal robusticity will likely enhance our understanding of adult postcranial morphology. Am J Phys Anthropol 2010. © 2009 Wiley-Liss, Inc. [source]

Cladistic Analysis of Human Apolipoprotein A4 Polymorphisms in Relation to Quantitative Plasma Lipid Risk Factors of Coronary Heart Disease

ANNALS OF HUMAN GENETICS, Issue 2 2003
G. Q. Wang
Summary Genetic variation in several genes involved in lipid metabolism is known to affect population variation in quantitative lipid risk factor profiles for coronary heart disease (CHD). The apolipoprotein A-IV gene (APOA4) is one such candidate gene. We genotyped five polymorphisms in the APOA4 gene (codon 127, codon 130, codon347, codon 360 and 3' VNTR) and investigated their impact on plasma lipid trait levels in three populations comprising 604 U.S. non-Hispanic Whites (NHWs), 408 U.S. Hispanics and 708 Nigerian Blacks. Cladistic analysis was carried out to identify 5-site haplotypes that were associated with significant phenotypic differences in each population. The distribution of APOA4 genotypes was significantly different between ethnic groups. The Africans were monomorphic for two of the five sites (codons 130 and 360), but possess a unique 12 bp insertion that was not observed in NHWs and Hispanics. Due to linkage disequilibrium between the sites, only 6 haplotypes were observed in NHWs and Hispanics, and 4 in Africans. Several gender-and ethnic-specific associations between genotypes and plasma lipid traits were observed when single sites were used. Several haplotypes were identified by cladistic analysis that may carry functional mutations that affect plasma lipid trait levels. [source]

Sexual dichromatism and male colour morph in ultraviolet-B reflectance in two populations of the jumping spider Phintella vittata (Araneae: Salticidae) from tropical China

BIOLOGICAL JOURNAL OF THE LINNEAN SOCIETY, Issue 1 2008
JINGJING LI
In the literature on animal use of ultraviolet (UV) vision and UV reflectance, it has usually been UV-A (315,400 nm) that is considered. Animals are generally assumed to be unable to discriminate UV-B (280,315 nm) from other wavelengths in natural sunlight. Recently, some animals are known to be able to detect and respond directly to UV-B in order to avoiding exposure to it. However, there is no evidence that the hue corresponding to UV-B is salient to an animal during intraspecies communication. Using Phintella vittata, an ornate jumping spider from two geographically different populations in China, we investigated geographical, intersexual, intrasexual, and interpopulation variation in UV reflectance. We found that both the males and the females of P. vittata reflect UV light, and that the reflection bands are located in UV-B, a part of reflectance spectrum never previously investigated. We also found a great deal of population variation in the UV-B spectral reflectance. Furthermore, two colour morphs, the ,green' and ,yellow' morphs, are identified for adult males for both populations, and both morphs differ greatly in both UV-B and human-visible wavelengths. This is the first demonstration of a UV-B reflecting salticid and UV-B sexual dichromatism. © 2008 The Linnean Society of London, Biological Journal of the Linnean Society, 2008, 94, 7,20. [source]

Neuropsychological dysfunction in bipolar affective disorder: a critical opinion

BIPOLAR DISORDERS, Issue 3 2005
Jonathan Savitz
Data from the imaging literature have led to suggestions that permanent structural brain changes may be associated with bipolar disorder. Individuals diagnosed with bipolar disorder display deficits on a range of neuropsychological tasks in both the acute and euthymic phases of illness, and correlations between experienced number of affective episodes and task performance are commonly reported. These findings have renewed interest in the neuropsychological profile of individuals with bipolar disorder, with deficits of attention, learning and memory, and executive function, asserted to be present. This paper critically reviews five different potential causes of neurocognitive dysfunction in bipolar disorder: (i) iatrogenic, (ii) acute functional changes associated with depression or mania, (iii) permanent structural lesions of a neurodegenerative origin, (iv) permanent structural lesions that are neurodevelopmental in origin, and (v) permanent functional changes that are most likely genetic in origin. Although the potential cognitive effects of residual symptomatology and long-term medication use cannot be entirely excluded, we conclude that functional changes associated with genetically driven population variation in critical neural networks underpin both the neurocognitive and affective symptoms of bipolar disorder. The philosophical implications of this conclusion for neuropsychology are briefly discussed. [source]

Lopingian (Late Permian) high-resolution conodont biostratigraphy in Iran with comparison to South China zonation

GEOLOGICAL JOURNAL, Issue 2-3 2010
Shu-Zhong Shen
Abstract Lopingian (Late Permian) conodonts and stratigraphy in northwest and central Iran have become hotly debated issues recently. We here use a sample-population approach, to develop a high-resolution conodont biostratigraphic framework for the Lopingian of Iran based on a re-examination of collections studied by Sweet from the Kuh-e-Ali Bashi area, northwest Iran; samples from the Abadeh C section and a nearby Permian-Triassic boundary section in the Abadeh area; and on published data. Six Wuchiapingian conodont zones, the Clarkina dukouensis, C. asymmetrica, C. leveni, C. guangyuanensis, C. transcaucasica and C. orientalis zones, and eight Changhsingian conodont zones, the Clarkina wangi, C. subcarinata, C. changxingensis, C. bachmanni, C. nodosa, C. yini, C. abadehensis and C. hauschkei zones, are described and figured. Diagnoses of ontogenetic characteristics to population variations of all the zone-naming species are re-described based on a sample-population taxonomic concept. The high-resolution Lopingian conodont zonation in Iran is closely correlative with its counterpart in South China. However, slightly different evolutionary trends in Clarkina populations existed at the very end of the Changhsingian in Iran and South China. This reflects a geographical cline and/or facies dependence and endemism in Clarkina populations rather than stratigraphic incompleteness of sections in either Iran or South China. Copyright © 2010 John Wiley & Sons, Ltd. [source]

Physical growth in schoolchildren from Argentina: Comparison with Argentinean and CDC/NCHs growth references

AMERICAN JOURNAL OF HUMAN BIOLOGY, Issue 3 2009
Alicia B. Orden
The aim of this study was to assess the physical growth of schoolchildren from Argentina by comparison with the CDC/NCHS and Argentinean growth references (AGR), to contribute to the discussion about the use of local or international references for the assessment of growth in developing countries. Weight and height were measured in 3,411 schoolchildren aged 5,14 years. Data were log-transformed and compared with both references by paired samples t -test (CI = 0.95; , = 0.005). The boys' weights were greater than CDC/NCHS (up to 10, and at 14 years old) and the national reference at all ages (P < 0.005). The girls also were heavier than CDC/NCHS (at 7 and 12 years old, P < 0.005) and AGR, except at age 11 and 14 years. In boys, height was lower than CDC/NCHS at 9 and 14 years of age, and higher than AGR at all ages (P < 0.005). The girls were also shorter than CDC/NCHS at 7, 13, and 14 years old (P < 0.005), and,except at age 14,taller than AGR. The weight was higher than both of the references. Height showed a clear dissociation from the national reference and minor differences from CDC/NCHS. Nevertheless, around puberty, the children's height fell short of CDC/NCHS, especially the girls, whose values approached those of their Argentinean peers. This divergence could be associated with cohort effects or population variations in adolescent growth spurt. The use of a single growth reference for preadolescent may be appropriate. The height decrease in adolescents suggests the usefulness of local standards at this period. Am. J. Hum. Biol. 2009. © 2008 Wiley-Liss, Inc. [source]