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Population Consisting (population + consisting)
Selected AbstractsBehaviourally structured populations persist longer under harsh environmental conditionsECOLOGY LETTERS, Issue 5 2003Sergei V. Petrovskii Abstract The factors and mechanisms that enhance population persistence in a fragmented habitat and/or under harsh environmental conditions are of significant current interest. We consider the dynamics of a population in an isolated habitat surrounded by an unfavourable environment subject to different behavioural responses between the individuals. We assume that there are two responses available: one of them is aggression in its extreme form, the other is its contrary when an individual takes flight in order to avoid any contact with its conspecific. We show that a behaviourally structured population consisting of individuals with fixed behavioural responses is intrinsically less prone to extinction under harsh environmental condition than a population where the individuals can ,choose' between the two given behaviours. We also show that, contrary to an intuitively expected negative impact of aggression on population persistence, the optimal conditions for population persistence are reached when a considerable proportion of the individuals exhibit aggressive behaviour. [source] The structure of a local population of phytopathogenic Pseudomonas brassicacearum from agricultural soil indicates development under purifying selection pressureENVIRONMENTAL MICROBIOLOGY, Issue 3 2001Johannes Sikorski Among the isolates of a bacterial community from a soil sample taken from an agricultural plot in northern Germany, a population consisting of 119 strains was obtained that was identified by 16S rDNA sequencing and genomic fingerprinting as belonging to the recently described species Pseudomonas brassicacearum. Analysis of the population structure by allozyme electrophoresis (11 loci) and random amplified polymorphic DNA,polymerase chain reaction (RAPD,PCR; four primers) showed higher resolution with the latter method. Both methods indicated the presence of three lineages, one of which dominated strongly. Stochastic tests derived from the neutral theory of evolution (including Slatkin's exact test, Watterson's homozygosity test and the Tajima test) indicated that the population had developed under strong purifying selection pressure. The presence of strains clearly divergent from the majority of the population can be explained by in situ evolution or by influx of strains as a result of migration or both. Phytopathogenicity of a P. brassicacearum strain determined with tomato plants reached the level obtained with the type strain of the known pathogen Pseudomonas corrugata. The results show that a selective sweep was identified in a local population. Previously, a local selective sweep had not been seen in several populations of different bacterial species from a variety of environmental habitats. [source] Mortality patterns in infectious salmon anaemia virus outbreaks in New Brunswick, CanadaJOURNAL OF FISH DISEASES, Issue 11 2005K L Hammell Abstract Mortality levels attributed to infectious salmon anaemia viral (ISAV) infections were examined at the net pen and site level in the 1996 smolt year class in three areas of New Brunswick, Canada. The year class in this region was the first known to have potential exposure to ISAV beginning at the time of seawater transfer. There was considerable variability in mortality patterns among net pen groups of fish. Net pen outbreak definitions were based on at least seven high mortality days in which there were at least 100 per 100 000 fish per day or >5% cumulative mortality for the study period. There were 106 net pen outbreaks in a study population consisting of 218 net pens. Although the number of new cases decreased as water temperature decreased, overall mortality levels at the study sites did not decrease noticeably. The median peak daily mortality rate during outbreaks was 492 per 100 000 fish per day, with 10% of cases experiencing >5200 mortalities per 100 000 fish per day. The median duration of outbreaks in net pens for which the fish were not slaughtered during the outbreak was 33 days and the median total loss in those outbreaks was 6600 per 100 000 fish. [source] Sample Size Determination for Categorical ResponsesJOURNAL OF FORENSIC SCIENCES, Issue 1 2009Dimitris Mavridis Ph.D. Abstract:, Procedures are reviewed and recommendations made for the choice of the size of a sample to estimate the characteristics (sometimes known as parameters) of a population consisting of discrete items which may belong to one and only one of a number of categories with examples drawn from forensic science. Four sampling procedures are described for binary responses, where the number of possible categories is only two, e.g., licit or illicit pills. One is based on priors informed from historical data. The other three are sequential. The first of these is a sequential probability ratio test with a stopping rule derived by controlling the probabilities of type 1 and type 2 errors. The second is a sequential variation of a procedure based on the predictive distribution of the data yet to be inspected and the distribution of the data that have been inspected, with a stopping rule determined by a prespecified threshold on the probability of a wrong decision. The third is a two-sided sequential criterion which stops sampling when one of two competitive hypotheses has a probability of being accepted which is larger than another prespecified threshold. The fifth procedure extends the ideas developed for binary responses to multinomial responses where the number of possible categories (e.g., types of drug or types of glass) may be more than two. The procedure is sequential and recommends stopping when the joint probability interval or ellipsoid for the estimates of the proportions is less than a given threshold in size. For trinomial data this last procedure is illustrated with a ternary diagram with an ellipse formed around the sample proportions. There is a straightforward generalization of this approach to multinomial populations with more than three categories. A conclusion provides recommendations for sampling procedures in various contexts. [source] Long-lasting coexpression of nestin and glial fibrillary acidic protein in primary cultures of astroglial cells with a major participation of nestin+/GFAP, cells in cell proliferationJOURNAL OF NEUROSCIENCE RESEARCH, Issue 8 2006Solčne Sergent-Tanguy Abstract Nestin, a currently used marker of neural stem cells, is transiently coexpressed with glial fibrillary acidic protein (GFAP) during development and is induced in reactive astrocytes following brain injury. Nestin expression has also been found in cultures of astroglial cells, but little is known about the fate and the mitotic activity of nestin-expressing cells in this in vitro model. The present study reveals a long-lasting expression of nestin in primary cultures of astroglial cells derived from the rat brain. Over 70% of the cells were nestin+ at 12 weeks, with a large majority coexpressing the GFAP astrocytic marker. Time-course analyses supported a transition from a nestin+/GFAP, to a nestin+/GFAP+ phenotype over time, which was further increased by cell cycle arrest. Interestingly, double staining with Ki67 revealed that over 90% of cycling cells were nestin+ whereas only 28% were GFAP+ in a population consisting of almost equivalent numbers of nestin+ and GFAP+ cells. These observations indicated that nestin+/GFAP, cells are actively engaged in mitotic activity, even after 2 weeks in vitro. Part of these cells might have retained properties of neural stem cells, insofar as 10% of cells in a primary culture of glial cells were able to generate neurospheres that gave rise to both neurons and astrocytes. Further studies will be necessary to characterize fully the proliferating cells in primary cultures of glial cells, but our present results reveal a major contribution of the nestin+/GFAP, cells to the increase in the number of astrocytes, even though nestin+/GFAP+ cells proliferate also. © 2006 Wiley-Liss, Inc. [source] Diversity in academic medicine no. 1 case for minority faculty development todayMOUNT SINAI JOURNAL OF MEDICINE: A JOURNAL OF PERSONALIZED AND TRANSLATIONAL MEDICINE, Issue 6 2008Diversity in academic medicine no. Abstract For the past 20 years, the percentage of the American population consisting of nonwhite minorities has been steadily increasing. By 2050, these nonwhite minorities, taken together, are expected to become the majority. Meanwhile, despite almost 50 years of efforts to increase the representation of minorities in the healthcare professions, such representation remains grossly deficient. Among the underrepresented minorities are African and Hispanic Americans; Native Americans, Alaskans, and Pacific Islanders (including Hawaiians); and certain Asians (including Hmong, Vietnamese, and Cambodians). The underrepresentation of underrepresented minorities in the healthcare professions has a profoundly negative effect on public health, including serious racial and ethnic health disparities. These can be reduced only by increased recruitment and development of both underrepresented minority medical students and underrepresented minority medical school administrators and faculty. Underrepresented minority faculty development is deterred by barriers resulting from years of systematic segregation, discrimination, tradition, culture, and elitism in academic medicine. If these barriers can be overcome, the rewards will be great: improvements in public health, an expansion of the contemporary medical research agenda, and improvements in the teaching of both underrepresented minority and non,underrepresented minority students. Mt Sinai J Med 75:491,498, © 2008 Mount Sinai School of Medicine [source] QTL analysis for the resistance to small brown planthopper (Laodelphax striatellus Fallén) in rice using backcross inbred linesPLANT BREEDING, Issue 1 2010C. X. Duan With 3 figures and 3 tables Abstract Small brown planthopper (SBPH) is a serious pest of rice (Oryza sativa L.) in China. An indica variety ,Kasalath' is highly resistant to SBPH. A mapping population consisting of 98 BC1F9 lines, derived from a backcross of ,Nipponbare'/,Kasalath'//,Nipponbare', was applied to detect quantitative trait loci (QTL) for resistance to SBPH. In the modified seedbox screening test, three QTLs for SBPH resistance were mapped on chromosomes 3 and 11, explaining 49.9% of the phenotypic variance. In the antixenosis test, a total of three QTLs conferring antixenosis against SBPH were detected on chromosomes 3, 8 and 11, which accounted for 36.4% of the total phenotypic variance. In addition, two QTLs expressing antibiosis to SBPH were detected on chromosomes 2 and 11, explaining 13.8% and 14.7% of the phenotypic variance, respectively. Qsbph11e, Qsbph11f and Qsbph11g were located in the region between S2260 and G257 on chromosome 11, indicating that the locus is significant in conferring resistance to SBPH in ,Kasalath'. The molecular markers linked to these QTLs should be useful in the development of varieties with horizontal resistance to SBPH. [source] Identification of genetic markers associated with fatness and leg weakness traits in the pigANIMAL GENETICS, Issue 6 2009B. Fan Summary Pigs have undergone long-term selection in commercial conditions for improved rate and efficiency of lean gain. Interestingly, it has been observed in both experimental and field conditions that leg weakness has increased over time, concurrent with the selection for improved rate of lean gain, while fatter animals tend to have better leg action, and foot and leg (FL) structure. The exact molecular mechanisms or individual genes responsible for this apparent genetic correlation between fatness and leg weakness and other physical adaptability traits have been less well reported. Based on our recent studies involving candidate genes and leg weakness traits, the present investigation has identified 30 SNPs from 26 genes that were found to be associated with 10th rib backfat in a sow population consisting of 2066 animals. The specific alleles associated with increased backfat tended to be associated with better overall leg action, as shown for the genes including MTHFR, WNT2, APOE, BMP8, GNRHR and OXTR, while inconsistent associations with the single FL structure trait and backfat were observed for other genes. This study suggests that in some cases there may be a common genetic mechanism or linked genes regulating fatness and leg weakness. Such relationships are clearly complex, and the utilization of genetic markers associated with both traits should be treated cautiously. [source] Analysis of recessive lethality on swine chromosome 6 in a Göttingen miniature resource familyANIMAL GENETICS, Issue 5 2005S. Mikawa Summary Previously, we reported recessive gene(s) that terminate fetal development on swine chromosome (SSC) 6 between SW855 and SW122. The affected alleles originated from a Göttingen miniature pig used for construction of a Göttingen miniature pig × Meishan resource population. However, it is not known when the gene(s) are activated during fetal development, which is one of the important factors in selecting candidate genes responsible for fetal death. In the present study, a second swine population consisting of 159 progeny was produced by mating pigs carrying the deleterious allele(s). This population allowed us to narrow the genetic region harbouring the affected gene(s) and to demonstrate that the region was confined between RYR1 and SW782 (5.7 cM on the National Institute of Animal Industry (NIAI) map and 100 cR on the INRA/University of Minnesota porcine radiation hybrid panel map). In order to determine when the affected gene(s) are activated and in turn terminate fetal development, embryos produced in the second population were collected at several development stages and genotyped for markers in the region. Genes in the homozygous state affected embryo development between 9 and 11 days post-coitus. [source] Prognostic Significance of QTc Interval for Predicting Total, Cardiac, and Ischemic Heart Disease Mortality in Community-Based Cohort from Warsaw Pol-MONICA PopulationANNALS OF NONINVASIVE ELECTROCARDIOLOGY, Issue 4 2000Aleksandra Pytlak M.D. Background: QT interval in resting electrocardiogram (ECC) is a sum of ventricular depolarization and repolarization time. Its prolongation is associated with a worse prognosis for survival due to a high incidence of severe ventricular arrhythmias. Methods: The random sample of the Warsaw Pol-MONICA population consisting of 2646 men and women, aged 35,64, screened in 1984, was followed-up until 1996. All deaths and their causes were registered based on death certificate diagnosis. QT interval was measured manually in three consecutive QRST complexes in each ECG and corrected using Bazett's formula (QT corrected: QTc). For statistical analyses the mean value of 3 QTc measurements were used. To assess the relationship between QTc and mortality, the Cox proportional hazards model with stepwise selection of variables was used. Results: Out of the screened sample, 459 persons died (309 men, 150 women), 226 due to cardiovascular diseases (CVD) (162 men, 64 women), and 81 due to ischemic heart disease (IHD) (59 men, 22 women). Both men and women who died were significantly older at baseline and had significantly longer mean QTc as compared to survivors (men: 457 ms vs 446 ms, P = 0.0001; women: 469 ms vs 459 ms, P = 0.001). Among men, after adjustment for confounding variables, mean QTc was significantly associated with total and CVD mortality, and in women, with CVD and IHD mortality. The risk of death rose with an increase in QTc duration. In men, with every increase in QTc by 20 ms, the risk of all causes of death rose by 11% (95% CI: 1.04,1.18), CVD death by 9% (95% Cl: 1.01,1.19), and IHD death by 11 % (95%: 0.97,1.28). In women, the risk of all-cause death increased by 9% (95% CI: 0.98,1.21), CVD death by 21% (95% Cl: 1.02,1.43), and IHD death by 41% (95% Cl: 1.08,1.85). Conclusion: QTc interval was significantly related to all cause, cardiovascular and ischemic heart disease. The risk of death increased with longer QTc duration. A.N.E. 2000;5(4):322,329 [source] | |||||||||||||