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Plant Diseases (plant + disease)
Terms modified by Plant Diseases Selected AbstractsMechanism of Resistance to Plant DiseasesJOURNAL OF PHYTOPATHOLOGY, Issue 11-12 2003R. Heitefuss No abstract is available for this article. [source] Evaluation of carrot resistance to alternaria leaf blight in controlled environmentsPLANT PATHOLOGY, Issue 1 2006A. Pawelec The objective of this study was to find a technique for plant resistance screening to alternaria leaf blight (ALB), caused by the fungus Alternaria dauci, in controlled environments. Glasshouse and laboratory screening methods were compared using three cultivars and F2 genotypes segregating for ALB resistance evaluated against self-pollinated F3 field-grown plants. Plant disease was assessed through a disease index obtained from the size and number of symptoms on carrot leaves. The results indicated the value of glasshouse evaluation and the inadequacy of detached leaf and hypocotyl assays for carrot screening for ALB resistance. Spearman's rank correlation, applied to results obtained with both F2 plants and their progeny, indicated that the optimal evaluation stage for ALB resistance in carrot is 20 days after inoculation. This test was powerful enough to be used as a prescreening test in breeding programmes. [source] Control of Plant Pathogenic Bacteria of Xanthomonas spp. by the Essential Oil and Extracts of Metasequoia glyptostroboides Miki ex Hu In vitro and In vivoJOURNAL OF PHYTOPATHOLOGY, Issue 7-8 2010Vivek K. Bajpai Abstract Plant diseases constitute an emerging threat to global food security. Many of the currently available antimicrobial agents for agriculture are highly toxic and non-biodegradable and cause extended environmental pollution. Therefore, this study was undertaken to assess the in vitro and in vivo antibacterial efficacy of the essential oil and organic extracts of Metasequoia glyptostroboides against plant pathogenic bacteria of Xanthomonas spp. The oil (1000 ,g/disc) and extracts (1500 ,g/disc) displayed potential antibacterial effect in vitro as a diameter of zones of inhibition against Xanthomonas campestris pv. campestris KC94-17-XCC, X. campestris pv. vesicatoria YK93-4-XCV, X. oryzae pv. oryzae KX019-XCO and X. sp SK12, which were found in the range of 10,14 and 8,12 mm, respectively. The minimum inhibitory concentration (MIC) and minimum bactericidal concentration (MBC) values of oil and the extracts were ranged from 125,250 and 125 500 ,g/ml and 250,1000 and 250,2000 ,g/ml, respectively. Also the oil had strong detrimental effect on the viable count of the tested bacteria. Further, the oil displayed remarkable in vivo antibacterial effect up to 65 to 100% disease suppression efficacy against the tested strains of Xanthomonas spp. on greenhouse-grown oriental melon plants (Cucumis melo L. var. makuwa). These results suggest that the oil and extracts of M. glyptostroboides could be potential source of natural antibacterials for applying in food and agriculture industries to control plant bacterial diseases caused by Xanthomonas spp. [source] White pines, Ribes, and blister rust: integration and actionFOREST PATHOLOGY, Issue 3-4 2010R. S. Hunt Summary The preceding articles in this series review the history, biology and management of white pine blister rust in North America, Europe and eastern Asia. In this integration, we connect and discuss seven recurring themes important for understanding and managing epidemics of Cronartium ribicola in the white pines (five-needle pines in subgenus Strobus). Information and action priorities for research and management of the pathogen, telial and aecial hosts, and their interactions are listed in a detailed Appendix. Syntheses focused on genetics, plant disease, invasive species or forest management have provided alternative but knowledgeable lessons on the white pine blister rust pathosystem. Two critical issues for the conservation of white pines are to sustain ecosystems affected by blister rust and to maintain genetic diversity for adaptive traits such as disease resistance. Forest genetics includes tree improvement and molecular techniques for research; their application can increase rust resistance by artificial and natural selection. Silviculture augments genetics with methods to deploy and enhance resistance as well as to regenerate and tend white pine stands. Although cultivated or wild Ribes might serve as inoculum sources, silviculture and horticulture can reduce the risk of serious impacts from blister rust using genetics for breeding and epidemiology for hazard assessment and disease control. Climate change threatens to cause major alterations in temperature and precipitation regimes, resulting in maladapted conifers succumbing to various diseases and insect outbreaks. In contrast, many white pine species have broad ecological ranges and are tolerant of harsh environments,traits that permit successful establishment and growth over wide geographic and altitudinal zones. Given appropriate management, white pines could thrive as valuable commercial and ecologically important keystone species. In an uncertain environment, adaptive management provides a learning and participatory approach for sustaining resilient ecosystems. [source] Analysis of expressed sequence tags for Frankliniella occidentalis, the western flower thripsINSECT MOLECULAR BIOLOGY, Issue 4 2010D. Rotenberg Abstract Thrips are members of the insect order Thysanoptera and Frankliniella occidentalis (the western flower thrips) is the most economically important pest within this order. F. occidentalis is both a direct pest of crops and an efficient vector of plant viruses, including Tomato spotted wilt virus (TSWV). Despite the world-wide importance of thrips in agriculture, there is little knowledge of the F. occidentalis genome or gene functions at this time. A normalized cDNA library was constructed from first instar thrips and 13 839 expressed sequence tags (ESTs) were obtained. Our EST data assembled into 894 contigs and 11 806 singletons (12 700 nonredundant sequences). We found that 31% of these sequences had significant similarity (E, 10,10) to protein sequences in the National Center for Biotechnology Information nonredundant (nr) protein database, and 25% were functionally annotated using Blast 2GO. We identified 74 sequences with putative homology to proteins associated with insect innate immunity. Sixteen sequences had significant similarity to proteins associated with small RNA-mediated gene silencing pathways (RNA interference; RNAi), including the antiviral pathway (short interfering RNA-mediated pathway). Our EST collection provides new sequence resources for characterizing gene functions in F. occidentalis and other thrips species with regards to vital biological processes, studying the mechanism of interactions with the viruses harboured and transmitted by the vector, and identifying new insect gene-centred targets for plant disease and insect control. [source] Forecasting migration of cereal aphids (Hemiptera: Aphididae) in autumn and springJOURNAL OF APPLIED ENTOMOLOGY, Issue 5 2009A. M. Klueken Abstract The migration of cereal aphids and the time of their arrival on winter cereal crops in autumn and spring are of particular importance for plant disease (e.g. barley yellow dwarf virus infection) and related yield losses. In order to identify days with migration potentials in autumn and spring, suction trap data from 29 and 45 case studies (locations and years), respectively, were set-off against meteorological parameters, focusing on the early immigration periods in autumn (22 September to 1 November) and spring (1 May to 9 June). The number of cereal aphids caught in a suction trap increased with increasing temperature, global radiation and duration of sunshine and decreased with increasing precipitation, relative humidity and wind speed. According to linear regression analyses, the temperature, global radiation and wind speed were most frequently and significantly associated with migration, suggesting that they have a major impact on flight activity. For subsequent model development, suction trap catches from different case studies were pooled and binarily classified as days with or without migration as defined by a certain number of migrating cereal aphids. Linear discriminant analyses of several predictor variables (assessed during light hours of a given day) were then performed based on the binary response variables. Three models were used to predict days with suction trap catches ,1, ,4 or ,10 migrating cereal aphids in autumn. Due to the predominance of Rhopalosiphum padi individuals (99.3% of total cereal aphid catch), no distinction between species (R. padi and Sitobion avenae) was made in autumn. As the suction trap catches were lower and species dominance changed in spring, three further models were developed for analysis of all cereal aphid species, R. padi only, and Metopolophium dirhodum and S. avenae combined in spring. The empirical, cross-classification and receiver operating characteristic analyses performed for model validation showed different levels of prediction accuracy. Additional datasets selected at random before model construction and parameterization showed that predictions by the six migration models were 33,81% correct. The models are useful for determining when to start field evaluations. Furthermore, they provide information on the size of the migrating aphid population and, thus, on the importance of immigration for early aphid population development in cereal crops in a given season. [source] Modelling the spread in space and time of an airborne plant diseaseJOURNAL OF THE ROYAL STATISTICAL SOCIETY: SERIES C (APPLIED STATISTICS), Issue 3 2008Samuel Soubeyrand Summary., A spatiotemporal model is developed to analyse epidemics of airborne plant diseases which are spread by spores. The observations consist of measurements of the severity of disease at different times, different locations in the horizontal plane and different heights in the vegetal cover. The model describes the joint distribution of the occurrence and the severity of the disease. The three-dimensional dispersal of spores is modelled by combining a horizontal and a vertical dispersal function. Maximum likelihood combined with a parametric bootstrap is suggested to estimate the model parameters and the uncertainty that is attached to them. The spatiotemporal model is used to analyse a yellow rust epidemic in a wheatfield. In the analysis we pay particular attention to the selection and the estimation of the dispersal functions. [source] From bacterial avirulence genes to effector functions via the hrp delivery system: an overview of 25 years of progress in our understanding of plant innate immunityMOLECULAR PLANT PATHOLOGY, Issue 6 2009JOHN W. MANSFIELD SUMMARY Cloning the first avirulence (avr) gene has led not only to a deeper understanding of gene-for-gene interactions in plant disease, but also to fundamental insights into the suppression of basal defences against microbial attack. This article (focusing on Pseudomonas syringae) charts the development of ideas and research progress over the 25 years following the breakthrough achieved by Staskawicz and coworkers. Advances in gene cloning technology underpinned the identification of both avr and hrp genes, the latter being required for the activation of the defensive hypersensitive reaction (HR) and pathogenicity. The delivery of Avr proteins through the type III secretion machinery encoded by hrp gene clusters was demonstrated, and the activity of the proteins inside plant cells as elicitors of the HR was confirmed. Key roles for avr genes in pathogenic fitness have now been established. The rebranding of Avr proteins as effectors, proteins that suppress the HR and cell wall-based defences, has led to the ongoing search for their targets, and is generating new insights into the co-ordination of plant resistance against diverse microbes. Bioinformatics-led analysis of effector gene distribution in genomes has provided a remarkable view of the interchange of effectors and also their functional domains, as the arms race of attack and defence drives the evolution of microbial pathogenicity. The application of our accrued knowledge for the development of disease control strategies is considered. [source] Building anisotropic sampling schemes for the estimation of anisotropic dispersalANNALS OF APPLIED BIOLOGY, Issue 3 2009S. Soubeyrand Abstract Anisotropy, a structural property of dispersal, is observed in dispersal patterns occurring for a wide range of biological systems. While dispersal models more and more often incorporate anisotropy, the sampling schemes required to collect data for validation usually do not account for the anisotropy of dispersal data. Using a parametric model already published to describe the spatial spread of a plant disease, the wheat yellow rust, we carry out a study aimed at recommending an appropriate sampling scheme for anisotropic data. In a first step, we show with a simulation study that prior knowledge of dispersal anisotropy can be used to improve the sampling scheme. One of the main guidelines to be proposed is the orientation of the sampling grid around the main dispersal directions. In a second step, we propose a sequential sampling procedure (SSP) used to automatically build anisotropic sampling schemes adapted to the actual anisotropy of dispersal. The SSP is applied to simulated and real data. The proposed methodology is expected to be adapted easily to any kind of organisms with wind-borne propagule dispersal because it does not require the inclusion of biological features specific of the considered organism. [source] Enemy at the gates: traffic at the plant cell pathogen interfaceCELLULAR MICROBIOLOGY, Issue 12 2008Caroline Hoefle Summary The plant apoplast constitutes a space for early recognition of potentially harmful non-self. Basal pathogen recognition operates via dynamic sensing of conserved microbial patterns by pattern recognition receptors or of elicitor-active molecules released from plant cell walls during infection. Recognition elicits defence reactions depending on cellular export via SNARE (soluble N-ethylmaleimide-sensitive factor attachment protein receptor) complex-mediated vesicle fusion or plasma membrane transporter activity. Lipid rafts appear also involved in focusing immunity-associated proteins to the site of pathogen contact. Simultaneously, pathogen effectors target recognition, apoplastic host proteins and transport for cell wall-associated defence. This microreview highlights most recent reports on the arms race for plant disease and immunity at the cell surface. [source] Use of monoclonal antibodies to quantify the dynamics of ,-galactosidase and endo-1,4-,-glucanase production by Trichoderma hamatum during saprotrophic growth and sporulation in peatENVIRONMENTAL MICROBIOLOGY, Issue 5 2005Christopher R. Thornton Summary Trichoderma species are ubiquitous soil and peat-borne saprotrophs that have received enormous scientific interest as biocontrol agents of plant diseases caused by destructive root pathogens. Mechanisms of biocontrol such as antibiosis and hyperparasitism are well documented and the biochemistry and molecular genetics of these processes defined. An aspect of biocontrol that has received little attention is the ability of Trichoderma species to compete for nutrients in their natural environments. Trichoderma species are efficient producers of polysaccharide-degrading enzymes that enable them to colonize organic matter thereby preventing the saprotrophic spread of plant pathogens. This study details the use of monoclonal antibodies (mAbs) to quantify the production of two enzymes implicated in the saprotrophic growth of Trichoderma species in peat. Using mAbs specific to the hemicellulase enzyme ,-galactosidase (AGL) and the cellulase enzyme endo-1,4-,-glucanase (EG), the relationship between the saprotrophic growth dynamics of a biocontrol strain of Trichoderma hamatum and the concomitant production of these enzymes in peat-based microcosms was studied. Enzyme activity assays and enzyme protein concentrations derived by enzyme-linked immunosorbent assay (ELISA) established the precision and sensitivity of mAb-based assays in quantifying enzyme production during active growth of the fungus. Trends in enzyme activities and protein concentrations were similar for both enzymes, during a 21-day sampling period in which active growth and sporulation of the fungus in peat was quantified using an independent mAb-based assay. There was a sharp increase in active biomass of T. hamatum 3 days after inoculation of microcosms with phialoconidia. After 3 days there was a rapid decline in active biomass which coincided with sporulation of the fungus. A similar trend was witnessed with EG activities and concentrations. This showed that EG production related directly to active growth of the fungus. The trend was not found, however, with AGL. There was a rapid increase in enzyme activities and protein concentrations on day 3, after which they remained static. The reason for the maintenance of elevated AGL probably resulted from secretion of the enzyme from conidia and chlamydospores. ELISA, immunofluoresence and immunogold electron microscopy studies of these cells showed that the enzyme is localized within the cytoplasm and is secreted extracellularly into the surrounding environment. It is postulated that release of oligosaccharides from polymeric hemicellulose by the constitutive spore-bound enzyme leads to AGL induction and could act as an environmental cue for spore germination. [source] Opportunities and constraints in the adaptation of technology for the diagnosis of bacterial plant diseases , experience from Tanzania,EPPO BULLETIN, Issue 3-4 2000R. Black In order to improve diagnostic services and plant quarantine capabilities in Tanzania, the techniques of semi-selective media, the BACTID system, metabolic profiling (Biolog), indirect enzyme-linked immunosorbent assays (ELISA) and polymerase chain reaction (PCR) were assessed for suitability with the existing facilities for the diagnosis and detection of plant-pathogenic bacteria of vegetables. Field-collected samples as well as farmers' own and commercial germplasm were used in studies involving Ralstonia solanacearum, Clavibacter michiganensis subsp. michiganensis and Xanthomonas campestris pv. vesicatoria in Solanaceae and X. c. pv. campestris in Brassicaceae. Each of the techniques was used successfully with one or more of the target pathogens; each had advantages depending on the speed, sensitivity and specificity required, as well as the costs of carrying out the diagnosis. However, constraints emerged relating to the use and disposal of materials such as plastic Petri dishes and toxic substances. The more familiar underlying constraints of high cost and poor availability of consumables and erratic water and electricity supply continued to present problems. These problems will be discussed in relation to the development of an integrated and sustainable approach to the provision of routine diagnostic services. [source] Fungal cannons: explosive spore discharge in the AscomycotaFEMS MICROBIOLOGY LETTERS, Issue 1 2007Frances Trail Abstract The ascomycetous fungi produce prodigious amounts of spores through both asexual and sexual reproduction. Their sexual spores (ascospores) develop within tubular sacs called asci that act as small water cannons and expel the spores into the air. Dispersal of spores by forcible discharge is important for dissemination of many fungal plant diseases and for the dispersal of many saprophytic fungi. The mechanism has long been thought to be driven by turgor pressure within the extending ascus; however, relatively little genetic and physiological work has been carried out on the mechanism. Recent studies have measured the pressures within the ascus and quantified the components of the ascus epiplasmic fluid that contribute to the osmotic potential. Few species have been examined in detail, but the results indicate diversity in ascus function that reflects ascus size, fruiting body type, and the niche of the particular species. [source] Internal amplification controls have not been employed in fungal PCR hence potential false negative resultsJOURNAL OF APPLIED MICROBIOLOGY, Issue 1 2007R.R.M. Paterson Abstract Polymerase chain reaction (PCR) is subject to false negative results. Samples of fungi with the genes of interest (e.g. a disease or mycotoxin) may be categorized as negative and safe as a consequence. Fungi are eukaryotic organisms that are involved in many fields of human activity such as antibiotic, toxin and food production. Certain taxa are implicated in human, animal and plant diseases. However, fungi are difficult to identify and PCR techniques have been proposed increasingly for this purpose. Internal amplification controls (IACs) will ameliorate the situation and need to become mandatory. These are nucleic acids that posses a sequence which will provide a PCR product (i) using the same primers employed for the target gene, and (ii) that will not coincide on the gel with the product of the target gene. Only one group of workers employed an IAC, to respond to potential inhibition, which was reported in 1995 from this present assessment of numerous reports. Inhibitors in cultures need to be minimized, and secondary metabolites are an obvious source. The fields reviewed herein include medical mycology, mycotoxicology, environmental mycology and plant mycology. The conclusion is that previous reports are compromised because IACs have not been employed in fungal PCR; future research must include this control at an early stage. [source] Effect of the Penicillium chrysogenum antifungal protein (PAF) on barley powdery mildew and wheat leaf rust pathogensJOURNAL OF BASIC MICROBIOLOGY, Issue 6 2008Balázs Barna Abstract The small molecular mass antifungal protein of Penicillium chrysogenum (PAF) inhibited the growths of two obligate biotrophic fungal pathogens, Blumeria graminis f. sp. hordei and Puccinia recondita f.sp. tritici and, hence, mitigated the symptoms of barley powdery mildew and wheat leaf rust infections, respectively. PAF also affected adversely the germination of B. graminis conidia and P. recondita uredospores causing degenerative branching of germ tubes. Since powdery mildews and rusts cause serious economic losses the potential applicability of PAF to control these plant diseases is promising. (© 2008 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim) [source] Strain E26 of Agrobacterium vitis, a Biological Control Agent of Grapevine Crown Gall, Does Not Contain virA and virG Pathogenic DeterminantsJOURNAL OF PHYTOPATHOLOGY, Issue 11-12 2009Qing Wei Abstract Risk assessment of biological control agents (BCAs) for the control of plant diseases in the field and/or laboratories has now become a necessary procedure before developing and producing novel BCAs. Agrobacterium vitis strain E26 is a promising potential biocontrol agent of grapevine crown gall disease. However, much less is understood about its safety or environmental risks. In this study, polymerase chain reaction (PCR) and Southern blot analyses were used to determine whether five essential virulence genes (virA, virG, iaaH, iaaM and ipt) were present in strain E26. Primers and probes were designed based on the conserved regions of each gene. The overall results obtained indicated that A. vitis strain E26 does not contain the virA and virG determinants, suggesting that this strain would be unlikely to elicit crown gall symptoms in either host or non-host plants. It seems that the iaaH, iaaM, or ipt gene were not present in strain E26 either. An applicable new approach combining PCR and Southern blot analyses to examine the pathogenicity of potential BCAs, particularly BCAs from the genus of Agrobacterium spp. was described. [source] Variation in Resistance of Camelina (Camelina sativa [L.] Crtz.) to Downy Mildew (Peronospora camelinae Gäum.)JOURNAL OF PHYTOPATHOLOGY, Issue 3-4 2001Vollmann Camelina (Camelina sativa) is a potential oilseed crop for both food and non-food utilization cultivated on a limited acreage in Europe and North America. An important low-input feature of camelina is its high level of resistance against plant diseases, which may partly be due to the production of antimicrobially efficient phytoalexins. In Central European countries such as Austria, downy mildew (Peronospora camelinae) is the only disease of camelina which has been found repeatedly, whereas other diseases and pests have been observed only occasionally. Therefore, the genotypic variation of downy mildew incidence was evaluated in two camelina field experiments carried out within a breeding programme. In both experiments, totally resistant breeding lines were identified and a continuous pattern of variation in disease incidence was observed, suggesting a horizontal type of resistance. In bi-parental populations, disease incidence of progeny appeared to be associated with disease scores of the parent genotypes, and transgressive segregation in disease incidence was also found. In 1998, the rate of downy mildew in camelina was lower than in 1999; in the latter growing season, grain yield was significantly affected by the disease, whereas other agronomic characters remained unaffected. Variation der Resistenz von Leindotter (Camelina sativa[L.] Crtz.) gegen Falschen Mehltau (Peronospora camelinae Gäum.) Leindotter (Camelina sativa) ist eine Ölpflanze, die zur Nahrungsmittelherstellung und für andere Zwecke genutzt werden kann und in Europa und Nordamerika auf relativ kleiner Fläche angebaut wird. Ein wichtiges Low-Input-Merkmal des Leindotters ist seine hohe Krankheitsresistenz, die vermutlich teilweise auf die Bildung antimikrobiell wirksamer Phytoalexine zurückgeht. In Österreich und anderen Ländern Mitteleuropas ist Falscher Mehltau (Peronospora camelinae) die einzige regelmäßig anzutreffende Krankheit des Leindotters, andere Krankheiten und Schädlinge werden nur gelegentlich beobachtet. Daher wurde die genotypische Variation der Inzidenz des Falschen Mehltaus im Rahmen eines Leindotter-Züchtungsprogramms in zwei Feldversuchen geprüft. In beiden Versuchen wurden vollständig resistente Zuchtlinien identifiziert, und ein kontinuierliches Variationsmuster der Krankheitsresistenz wurde beobachtet, was auf horizontale Resistenz schließen läßt. In biparentalen Populationen war die Befallshänfigkeit bei den Nachkommen offenbar mit den Boniturwerten der elterlichen Genotypen assoziiert, und bei der Befallshänfigkeit wurde auch eine transgressive Aufspaltung beobachtet. 1998 war der Befall des Leindotters mit Falschem Mehltau geringer als 1999; im letztgenannten Jahr war der Kornertrag infolge der Krankheit deutlich verringert, während andere agronomische Merkmale unbeeinflußt blieben. [source] Modelling the spread in space and time of an airborne plant diseaseJOURNAL OF THE ROYAL STATISTICAL SOCIETY: SERIES C (APPLIED STATISTICS), Issue 3 2008Samuel Soubeyrand Summary., A spatiotemporal model is developed to analyse epidemics of airborne plant diseases which are spread by spores. The observations consist of measurements of the severity of disease at different times, different locations in the horizontal plane and different heights in the vegetal cover. The model describes the joint distribution of the occurrence and the severity of the disease. The three-dimensional dispersal of spores is modelled by combining a horizontal and a vertical dispersal function. Maximum likelihood combined with a parametric bootstrap is suggested to estimate the model parameters and the uncertainty that is attached to them. The spatiotemporal model is used to analyse a yellow rust epidemic in a wheatfield. In the analysis we pay particular attention to the selection and the estimation of the dispersal functions. [source] Development of 14 minisatellite markers for the citrus canker bacterium, Xanthomonas citri pv. citriMOLECULAR ECOLOGY RESOURCES, Issue 1 2009L. BUI THI NGOC Abstract We screened the genome of Xanthomonas citri pv. citri strain 306 for tandem repeats. A multiplex polymerase chain reaction protocol was used to assess the genetic diversity of 239 strains of X. citri pv. citri from Asia. The total number of alleles per locus ranged from three to 20. Using pooled data sets, 223 different haplotypes were identified. Successful amplifications were obtained at most loci for seven other X. citri pathovars. This typing scheme is expected to be useful at different spatial scales for population studies of pathovars of X. citri, several of which cause plant diseases of economic importance. [source] Presence of two glycolytic gene clusters in a severe pathogenic line of Candidatus Phytoplasma asterisMOLECULAR PLANT PATHOLOGY, Issue 4 2007KENRO OSHIMA SUMMARY Phytoplasmas are plant-pathogenic bacteria that are associated with numerous plant diseases. We have previously reported the complete genomic sequence of Candidatus Phytoplasma asteris, OY strain, OY-M line, which causes mild symptoms. The phytoplasma genome lacks several important metabolic genes, implying that the consumption of metabolites by phytoplasmas in plants may cause disease symptoms. Here we show that the approximately 30-kb region including the glycolytic genes was tandemly duplicated in the genome of OY-W phytoplasma, which causes severe symptoms. Almost duplicated genes became pseudogenes by frameshift and stop-codon mutations, probably because of their functional redundancy. However, five kinds of genes, including two glycolytic genes, remained full-length ORFs, suggesting that it is advantageous for the phytoplasma to retain these genes in its lifestyle. In particular, 6-phosphofructokinase is known as a rate-limiting enzyme of glycolysis, implying that the different number of glycolytic genes between OY-W and OY-M may influence their respective glycolysis activities. We previously reported that the phytoplasma population of OY-W was higher than that of OY-M in their infected plants. Taking this result into account, the higher consumption of the carbon source may affect the growth rate of phytoplasmas and also may directly or indirectly cause more severe symptoms. [source] Combating plant diseases,the Darwin connectionPEST MANAGEMENT SCIENCE (FORMERLY: PESTICIDE SCIENCE), Issue 11 2009Derek W Hollomon Abstract Although Darwin knew of plant diseases, he did not study them as part of his analysis of natural selection. Effective plant disease control has only been developed after his death. This article explores the relevance of Darwin's ideas to three problem areas with respect to diseases caused by fungi: emergence of new diseases, loss of disease resistance bred into plants and development of fungicide resistance. Darwin's concept of change through natural or artificial selection relied on selection of many small changes, but subsequent genetic research has shown that change can also occur through large steps. Appearance of new diseases can involve gene duplication, transfer or recombination, but all evidence points to both host plant resistance and fungicide susceptibility being overcome through point mutations. Because the population size of diseases such as rusts and powdery and downy mildews is so large, all possible point mutations are likely to occur daily, even during moderate epidemics. Overcoming control measures therefore reflects the overall fitness of these mutants, and much resource effort is being directed towards assessment of their fitness, both in the presence and in the absence of selection. While recent developments in comparative genomics have caused some revision of Darwin's ideas, experience in managing plant disease control measures clearly demonstrates the relevance of concepts he introduced 150 years ago. It also reveals the remarkable speed and the practical impact of adaptation in wild microorganism populations to changes in their environment, and the difficulty of stopping or delaying such adaptation. Copyright © 2009 Society of Chemical Industry [source] To what extent are soil amendments useful to control Verticillium wilt?PEST MANAGEMENT SCIENCE (FORMERLY: PESTICIDE SCIENCE), Issue 8 2009Nieves Goicoechea Abstract The genus Verticillium includes several species that attack economically important crops throughout the world. The control of Verticillium spp. becomes especially difficult when they form microsclerotia that can survive in the field soil for several years. It has been common practice to fumigate soil with chemicals such as methyl bromide and/or chloropicrin to control soil-borne fungal pathogens. Other chemicals that are used against Verticillium spp. are the antifungal antibiotic aureofungin, the fungicides benomyl, captan, carbendazim, thiram, azoxystrobin and trifloxystrobin and the plant defence activator acibenzolar- S -methyl. However, the potential risks involved in applying phytochemicals to crop plants for both the environment and human health, together with their limited efficacy for controlling Verticillium -induced diseases, support the need to find alternatives to replace their use or improve their efficacy. Soil amendment with animal or plant organic debris is a cultural practice that has long been used to control Verticillium spp. However, today the organic farming industry is becoming a significant player in the global agricultural production scene. In this review, some of the main results concerning the efficacy of several soil amendments as plant protectors against Verticillium spp. are covered, and the limitations and future perspectives of such products are discussed in terms of the control of plant diseases. Copyright © 2009 Society of Chemical Industry [source] Isolation and antifungal activity of lignans from Myristica fragrans against various plant pathogenic fungiPEST MANAGEMENT SCIENCE (FORMERLY: PESTICIDE SCIENCE), Issue 9 2007Jun Young Cho Abstract BACKGROUND: In a search for plant extracts with potent in vivo antifungal activity against various plant diseases, we found that treatment with a methanol extract of Myristica fragrans Houttyn (nutmeg) seeds reduced the development of various plant diseases. The objectives of the present study were to isolate and determine antifungal substances from My. fragrans and to evaluate their antifungal activities. RESULTS: Three antifungal lignans were isolated from the methanol extract of My. fragrans seeds and identified as erythro -austrobailignan-6 (EA6), meso -dihydroguaiaretic acid (MDA) and nectandrin-B (NB). In vitro antimicrobial activity of the three lignans varied according to compound and target species. Alternaria alternata, Colletotrichum coccodes, C. gloeosporioides, Magnaporthe grisea, Agrobacterium tumefaciens, Acidovorax konjaci and Burkholderia glumae were relatively sensitive to the three lignans. In vivo, all three compounds effectively suppressed the development of rice blast and wheat leaf rust. In addition, EA6 and NB were highly active against the development of barley powdery mildew and tomato late blight, respectively. Both MDA and NB also moderately inhibited the development of rice sheath blight. CONCLUSION: This is the first study to demonstrate the in vitro and in vivo antifungal activities of the three lignans from My. fragrans against plant pathogenic fungi. Copyright © 2007 Society of Chemical Industry [source] Role of 2,4-Diacetylphloroglucinol-Producing Fluorescent Pseudomonas spp. in the Defense of Plant RootsPLANT BIOLOGY, Issue 1 2007D. M. Weller Abstract: Plants have evolved strategies of stimulating and supporting specific groups of antagonistic microorganisms in the rhizosphere as a defense against diseases caused by soilborne plant pathogens owing to a lack of genetic resistance to some of the most common and widespread soilborne pathogens. Some of the best examples of natural microbial defense of plant roots occur in disease suppressive soils. Soil suppressiveness against many different diseases has been described. Take-all is an important root disease of wheat, and soils become suppressive to take-all when wheat or barley is grown continuously in a field following a disease outbreak; this phenomenon is known as take-all decline (TAD). In Washington State, USA and The Netherlands, TAD results from the enrichment during monoculture of populations of 2,4-diacetylphloroglucinol (2,4-DAPG)-producing Pseudomonas fluorescens to a density of 105 CFU/g of root, the threshold required to suppress the take-all pathogen, Gaeumannomyces graminis var. tritici. 2,4-DAPG-producing P. fluorescens also are enriched by monoculture of other crops such as pea and flax, and evidence is accumulating that 2,4-DAPG producers contribute to the defense of plant roots in many different agroecosystems. At this time, 22 distinct genotypes of 2,4-DAPG producers (designated A - T, PfY and PfZ) have been defined by whole-cell repetitive sequence-based (rep)-PCR analysis, restriction fragment length polymorphism (RFLP) analysis of phlD, and phylogenetic analysis of phlD, but the number of genotypes is expected to increase. The genotype of an isolate is predictive of its rhizosphere competence on wheat and pea. Multiple genotypes often occur in a single soil and the crop species grown modulates the outcome of the competition among these genotypes in the rhizosphere. 2,4-DAPG producers are highly effective biocontrol agents against a variety of plant diseases and ideally suited for serving as vectors for expressing other biocontrol traits in the rhizosphere. [source] | ||||||||||||||||||||||||||||