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Physical Habitat (physical + habitat)
Selected AbstractsAn Evaluation of Qualitative Indexes of Physical Habitat Applied to Agricultural Streams in Ten U.S. States,JOURNAL OF THE AMERICAN WATER RESOURCES ASSOCIATION, Issue 4 2010Robert M. Hughes Hughes, Robert M., Alan T. Herlihy, and Philip R. Kaufmann, 2010. An Evaluation of Qualitative Indexes of Physical Habitat Applied to Agricultural Streams in Ten U.S. States. Journal of the American Water Resources Association (JAWRA) 46(4): 792-806. DOI: 10.1111/j.1752-1688.2010.00455.x Abstract:, Assessment of stream physical habitat condition is important for evaluating stream quality globally. However, the diversity of metrics and methods for assessing physical habitat condition confounds comparisons among practitioners. We surveyed 51 previously sampled stream sites (0.0-6.3 m wide) located in regions of row-crop agriculture in Oregon, California, North Dakota, South Dakota, Nebraska, Iowa, Minnesota, Pennsylvania, Maryland, and West Virginia to evaluate the comparability of four indexes of physical habitat condition relative to each other. We also compared the indexes to previously calculated indexes of fish and macroinvertebrate condition. The physical habitat indexes included the Stream Visual Assessment Protocol Version 2 of the Natural Resources Conservation Service, the qualitative habitat evaluation index of the Ohio Environmental Protection Agency, the rapid bioassessment protocol of the United States Environmental Protection Agency (USEPA), and a qualitative physical habitat index based on USEPA quantitative physical habitat measurements. All four indexes were highly correlated with each other, but low-to-moderately correlated with biotic index scores for fish and macroinvertebrate assemblages. Moderately high correlations occurred between some macroinvertebrate biotic index scores and quantitative metrics. We conclude that additional research is needed to increase the predictive and diagnostic capabilities of qualitative physical habitat indexes. [source] Trout density and health in a stream with variable water temperatures and trace element concentrations: Does a cold-water source attract trout to increased metal exposure?ENVIRONMENTAL TOXICOLOGY & CHEMISTRY, Issue 4 2009David D. Harper Abstract A history of hard-rock mining has resulted in elevated concentrations of heavy metals in Prickly Pear Creek (MT, USA). Remediation has improved water quality; however, dissolved zinc and cadmium concentrations still exceed U.S. Environmental Protection Agency water-quality criteria. Physical habitat, salmonid density, fish health, and water quality were assessed, and metal concentrations in fish tissues, biofilm, and macroinvertebrates were determined to evaluate the existing condition in the watershed. Cadmium, zinc, and lead concentrations in fish tissues, biofilm, and invertebrates were significantly greater than those at the upstream reference site and an experimental site farther downstream of the confluence. Fish densities were greatest, and habitat quality for trout was better, downstream of the confluence, where water temperatures were relatively cool (16°C). Measures of fish health (tissue metal residues, histology, metallothionein concentrations, and necropsies), however, indicate that the health of trout at this site was negatively affected. Trout were in colder but more contaminated water and were subjected to increased trace element exposures and associated health effects. Maximum water temperatures in Prickly Pear Creek were significantly lower directly below Spring Creek (16°C) compared to those at an experimental site 10 km downstream (26°C). Trout will avoid dissolved metals at concentrations below those measured in Prickly Pear Creek; however, our results suggest that the preference of trout to use cool water temperatures may supersede behaviors to avoid heavy metals. [source] Local and ecoregion effects on fish assemblage structure in tributaries of the Rio Paraíba do Sul, BrazilFRESHWATER BIOLOGY, Issue 12 2009BENJAMIN CARVALHO TEIXEIRA PINTO Summary 1.,We examined the effects of physical and chemical habitat variables and ecoregions on species occurrence and fish assemblage structure in streams of the Paraíba do Sul basin, in southeast Brazil. 2.,Fish and environmental data were collected from 42 sites on 26 first to fourth order streams (1 : 50 000 map scale) in three ecoregions. The sites occurred in one valley and two plateau ecoregions at altitudes of 40,1080 m and distances of 0.1,188 km from the main channel of the Rio Paraíba do Sul. Physical habitat (substratum, riparian cover, habitat types) and water quality (dissolved oxygen, pH, temperature and conductivity) variables were measured at each sampling site. 3.,A total of 2684 individuals in 16 families and 59 species were recorded. 4.,Ecoregion was a better predictor of the fish assemblage than the other environmental variables, according to the differences between the mean within-class and mean between-class similarities in assemblage data. 5.,Differing landscape characteristics were associated with differing local variables and thereby with differing fish assemblage structures. Riffles, shrub, grass, dissolved oxygen, conductivity and temperature were closely related to fish assemblage structure. 6.,Fish assemblages in sites far from the main river and at higher altitudes also differed from those near the Paraíba do Sul main channel, presumably as a result of differences in connectivity, covarying environmental factors and anthropogenic influence. 7.,These results reinforce the importance of understanding how stream communities are influenced by processes and patterns operating at local and regional scales, which will aid water resource managers to target those factors in their management and rehabilitation efforts. [source] Growth and mortality of prairie stream fishes: relations with fish community and instream habitat characteristicsECOLOGY OF FRESHWATER FISH, Issue 2 2001M. C. Quist Abstract , Few studies have been conducted to describe the age structure, growth rates and mortality of fishes in small stream ecosystems. The purpose of this study was therefore to determine age structure, growth rates and mortality (i.e., total annual mortality and, age-specific mortality) of central stonerollers Campostoma anomalum, creek chubs Semotilus atromaculatus, red shiners Cyprinella lutrensis and green sunfish Lepomis cyanellus from 13 streams on Fort Riley Military Reservation, Kansas, using incremental growth analysis. Further, we were interested in determining the influence of fish community and instream habitat characteristics on growth rates. The age structure of central stonerollers, creek chubs, and red shiners was dominated by young individuals (i.e., less than age 2); however, over 60% of the green sunfish were age 2 to age 4. Mean total annual mortality was >60% for cyprinids and averaged approximately 44% for green sunfish. The age-specific mortality of central stonerollers and red shiners was generally less than 45% between age 0 and 1 and increased to over 85% for fishes greater than age 1. Fish community characteristics (e.g., catch per unit effort of trophic guilds) and chemical habitat (e.g., total phosphorous) were not related to growth rates (P>0.05). Growth of central stonerollers was not significantly correlated with physical habitat (P>0.05). However, the growth increments of creek chubs, red shiners, and green sunfish were related to the amount of woody debris (e.g., total woody debris, log complex habitat; r>0.60; P,0.05). The results of this study provide important information on the population dynamic rate functions of cyprinid and green sunfish populations in small prairie streams. Furthermore, these data suggest that woody debris is important habitat influencing growth of stream fishes., [source] Hypoxia-based habitat compression of tropical pelagic fishesFISHERIES OCEANOGRAPHY, Issue 6 2006ERIC D. PRINCE Abstract Large areas of cold hypoxic water occur as distinct strata in the eastern tropical Pacific (ETP) and Atlantic oceans as a result of high productivity initiated by intense nutrient upwelling. We show that this stratum restricts the depth distribution of tropical pelagic marlins, sailfish, and tunas by compressing the acceptable physical habitat into a narrow surface layer. This layer extends downward to a variable boundary defined by a shallow thermocline, often at 25 m, above a barrier of cold hypoxic water. The depth distributions of marlin and sailfish monitored with electronic tags and average dissolved oxygen (DO) and temperature profiles show that this cold hypoxic environment constitutes a lower habitat boundary in the ETP, but not in the western North Atlantic (WNA), where DO is not limiting. Eastern Pacific and eastern Atlantic sailfish are larger than those in WNA, where the hypoxic zone is much deeper or absent. Larger sizes may reflect enhanced foraging opportunities afforded by the closer proximity of predator and prey in compressed habitat, as well as by the higher productivity. The shallow band of acceptable habitat restricts these fishes to a very narrow surface layer and makes them more vulnerable to over-exploitation by surface gears. Predictably, the long-term landings of tropical pelagic tunas from areas of habitat compression have been far greater than in surrounding areas. Many tropical pelagic species in the Atlantic Ocean are currently either fully exploited or overfished and their future status could be quite sensitive to increased fishing pressures, particularly in areas of habitat compression. [source] Fish community characteristics of the lower Gambia River floodplains: a study in the last major undisturbed West African riverFRESHWATER BIOLOGY, Issue 2 2009VASILIS LOUCA Summary 1.,The Gambia River is the last major West African river that has not been impounded. However, a hydroelectric dam is being constructed and substantial changes to the hydrology and ecology of the system are expected. 2.,Little information is available on the impact of water impoundments in semi-arid regions on downstream floodplain fish communities, due to the scarcity of pre-intervention data. Because profound impacts on physical habitat, salinity and nutrient transport can occur downstream of such impoundments, a knowledge of the species-habitat associations of biota such as fishes is necessary for understanding likely changes and how to limit them. 3.,Fish were sampled using cast and hand nets along two transects on the floodplain, and with fyke nets in two ,bolongs' (creeks) from May to November 2005 and 2006 in the lower reaches of the Gambia River, close to the salt water front where ecological changes due to the construction of the dam are likely to be pronounced. 4.,Greatest fish species richness was associated with low conductivity, low pH and deep water. Bolongs held greater species richness compared with other floodplain habitats, probably because they acted as conduits for fish moving on and off the floodplain. Species richness and catch biomass increased rapidly following the first rains and then declined. 5.,Using a multivariate analysis, three main species groups were identified on the floodplain; one associated with deeper water, one with less brackish water and one with shallow, open water. Tilapia guineensis was the commonest species on the floodplains. 6.,The floodplains provide nursery habitats as many fish captured were immature, particularly for species where adults are mainly encountered in the main channel. Several small-sized floodplain specialists were also represented by a high proportion of mature individuals. 7.,Impoundment is expected to reduce seasonal flooding of the floodplain in the lower Gambia River, downstream of the impoundment, resulting in reduced occurrence of aquatic habitats, especially bolongs, together with lower dissolved oxygen and increased salinity, leading to alteration of the floodplain fish communities, benefiting salt-tolerant species, reducing overall species richness and probably reducing floodplain fish production. [source] Context-dependent effects of freshwater mussels on stream benthic communitiesFRESHWATER BIOLOGY, Issue 6 2006DANIEL E. SPOONER Summary 1. We asked whether unionid mussels influence the distribution and abundance of co-occurring benthic algae and invertebrates. In a yearlong field enclosure experiment in a south-central U.S. river, we examined the effects of living mussels versus sham mussels (shells filled with sand) on periphyton and invertebrates in both the surrounding sediment and on mussel shells. We also examined differences between two common unionid species, Actinonaias ligamentina (Lamarck 1819) and Amblema plicata (Say 1817). 2. Organic matter concentrations and invertebrate densities in the sediment surrounding mussels were significantly higher in treatments with live mussels than treatments with sham mussels or sediment alone. Organic matter was significantly higher in the sediment surrounding Actinonaias than that surrounding Amblema. Actinonaias was more active than Amblema and may have increased benthic organic matter through bioturbation. 3. Living mussels increased the abundance of periphyton on shells and the abundance and richness of invertebrates on shells, whereas effects of sham mussels were similar to sediment alone. Differences in the amount of periphyton growing on the shells of the two mussel species reflected differences in mussel activity and shell morphology. 4. Differences between living and sham mussel treatments indicate that biological activities of mussels provide ecosystem services to the benthic community beyond the physical habitat provided by shells alone. In treatments containing live mussels we found significant correlations between organic matter and chlorophyll a concentrations in the sediment, organic matter concentrations and invertebrate abundance in the sediment and the amount of chlorophyll a on the sediment and invertebrate abundance. There were no significant correlations among these response variables in control treatments. Thus, in addition to providing biogenic structure as habitat, mussels likely facilitate benthic invertebrates by altering the availability of resources (algae and organic matter) through nutrient excretion and biodeposition. 5. Effects of mussels on sediment and shell periphyton concentrations, organic matter concentrations and invertebrate abundance, varied seasonally, and were strongest in late summer during periods of low water volume, low flow, and high water temperature. 6. Our study demonstrates that freshwater mussels can strongly influence the co-occurring benthic community, but that effects of mussels are context-dependent and may vary among species. [source] Habitat selection by juvenile Atlantic salmon: the interaction between physical habitat and abundanceJOURNAL OF FISH BIOLOGY, Issue 4 2005R. D. Hedger The effect of physical river habitat variables on the distribution of juvenile Atlantic salmon Salmo salar L. in the Rivière de la Trinité, Québec, Canada, was examined using generalized additive modelling. A survey of Atlantic salmon fry and parr densities and habitat variables (flow velocity, water column depth and substratum size) was conducted in the summer months from 1984 to 1992. Clear patterns of habitat use existed: specific ranges of habitat variables were selected, with parr preferring greater velocities, depths and substratum sizes than fry. There was a large variation, however, in juvenile densities for given velocities, depths or substratum sizes, with this variation being greatest in optimal habitats. On examination of an individual year, interaction between the variables was found to explain some of the variation. On a year-to-year basis the juvenile Atlantic salmon population was found to exhibit an ,Ideal Free Distribution', which resulted in greatest variation in optimal habitats with year-to-year changes in population abundance. [source] Effects of Impervious Cover at Multiple Spatial Scales on Coastal Watershed Streams,JOURNAL OF THE AMERICAN WATER RESOURCES ASSOCIATION, Issue 3 2007Roy Schiff Abstract:, The spatial scale and location of land whose development has the strongest influence on aquatic ecosystems must be known to support land use decisions that protect water resources in urbanizing watersheds. We explored impacts of urbanization on streams in the West River watershed, New Haven, Connecticut, to identify the spatial scale of watershed imperviousness that was most strongly related to water chemistry, macroinvertebrates, and physical habitat. A multiparameter water quality index was used to characterize regional urban nonpoint source pollution levels. We identified a critical level of 5% impervious cover, above which stream health declined. Conditions declined with increasing imperviousness and leveled off in a constant state of impairment at 10%. Instream variables were most correlated (0.77 , |r| , 0.92, p < 0.0125) to total impervious area (TIA) in the 100-m buffer of local contributing areas (,5-km2 drainage area immediately upstream of each study site). Water and habitat quality had a relatively consistent strong relationship with TIA across each of the spatial scales of investigation, whereas macroinvertebrate metrics produced noticeably weaker relationships at the larger scales. Our findings illustrate the need for multiscale watershed management of aquatic ecosystems in small streams flowing through the spatial hierarchies that comprise watersheds with forest-urban land use gradients. [source] Effectiveness of the river environment classification in the Auckland RegionNEW ZEALAND GEOGRAPHER, Issue 3 2008Liza Inglis Abstract:, The River Environment Classification (REC) provides a GIS-based tool to differentiate between biophysical attributes of river systems. This study tests the effectiveness of the REC as a tool to differentiate physical habitat and macroinvertebrate assemblages between four classes of stream in the Auckland region. Results indicate significant within-class variability in physical habitat and macroinvertebrate assemblages, with considerable overlap among the four classes. Biophysically meaningful stream classes cannot be identified from GIS-derived data applied in this research. Field analyses of physical habitat (i.e. geomorphic river condition) are required as a supplementary tool to interpret ecological relationships for differing stream types. [source] Macrophytes in Urban Stream Rehabilitation: Establishment, Ecological Effects, and Public PerceptionRESTORATION ECOLOGY, Issue 3 2006Scott T. Larned Abstract Efforts to rehabilitate degraded urban streams generally focus on improving physical habitat and rarely include reestablishing biota such as macrophytes. Our objectives in this study were to propagate and transplant native macrophytes into a South Island, New Zealand, urban stream undergoing rehabilitation, assess macrophyte survival and growth, and determine whether native macrophytes suppress non-native macrophytes and/or enhance stream invertebrate communities. Effects of native macrophytes on invertebrates and non-native macrophytes were assessed after transplanting patches of native macrophytes into a 230-m-long stream section. A 100-m-long section upstream was left unplanted for subsequent comparisons. Following the study, a survey was conducted to gauge public opinion about the rehabilitation project and determine whether macrophytes were prominent in perceptions of stream health. In the first growing season, native macrophyte cover in the planted stream section increased from 1.5 to 20%, and then decreased during winter. Regrowth from rhizomes led to rapid aboveground growth during the second year, when cover reached 51%. Non-native macrophytes colonized the stream the first year, but native macrophytes appeared to limit the spread of non-natives, which were absent in the planted section by the second spring. Native macrophyte establishment did not enhance invertebrate communities as predicted; few invertebrate metrics differed significantly between the planted and unplanted sections. Pollution- and sediment-tolerant invertebrate taxa were abundant in both sections, suggesting that invertebrate colonization was limited by water quality or sedimentation, not macrophyte composition. Survey respondents considered the stream to be visually and ecologically improved after rehabilitation, and macrophyte establishment was generally considered positive or neutral. [source] A trial of two trouts: comparing the impacts of rainbow and brown trout on a native galaxiidANIMAL CONSERVATION, Issue 4 2010K. A. Young Abstract Rainbow trout Oncorhynchus mykiss and brown trout Salmo trutta are the world's two most widespread exotic fishes, dominate the fish communities of most cold-temperate waters in the southern hemisphere and are implicated in the decline and extirpation of native fish species. Here, we provide the first direct comparison of the impacts of rainbow and brown trout on populations of a native fish by quantifying three components of exotic species impact: range, abundance and effect. We surveyed 54 small streams on the island of Chiloé in Chilean Patagonia and found that the rainbow trout has colonized significantly more streams and has a wider geographic range than brown trout. The two species had similar post-yearling abundances in allopatry and sympatry, and their abundances depended similarly on reach-level variation in the physical habitat. The species appeared to have dramatically different effects on native drift-feeding Aplochiton spp., which were virtually absent from streams invaded by brown trout but shared a broad sympatric range with rainbow trout. Within this range, the species' post-yearling abundances varied independently before and after controlling for variation in the physical habitat. In the north of the island, Aplochiton spp. inhabited streams uninvaded by exotic trouts. Our results provide a context for investigating the mechanisms responsible for apparent differences in rainbow and brown trout invasion biology and can help inform conservation strategies for native fishes in Chiloé and elsewhere. [source] Interaction between macroinvertebrates, discharge and physical habitat in upland riversAQUATIC CONSERVATION: MARINE AND FRESHWATER ECOSYSTEMS, Issue S1 2010Michael J. Dunbar Abstract 1.There is a need to relate changing river flows to ecological response, particularly using methods which do not require extensive new data for water bodies without historical data. This paper describes how local-scale habitat features and changing discharge appear to influence a macroinvertebrate-based biotic index. 2.The study used 87 time-series of river biomonitoring data from upland, wadeable streams with quasi-natural flow regimes across England and Wales. Twenty-seven of the sites were matched to a nearby flow gauging station, and historical, natural flows using a generalized rainfall-runoff model were synthesized for 60 sites. All sites were matched to a River Habitat Survey (RHS) within 1,km. 3.The data were analysed using multilevel linear regression, combining sample- and site-level characteristics as predictors. Common responses were assessed across sites, using the biotic index LIFE (Lotic Invertebrate index for Flow Evaluation), an average of abundance-weighted Flow Groups which indicate the relative preference among taxa for higher velocities with gravel/cobble substrates or slow velocities with finer substrates. The aim was to understand the influence of physical habitat on macroinvertebrate response to antecedent high and low flow magnitude. 4.There was a positive relationship between LIFE score calculated from spring and autumn samples and antecedent high (Q10) and low flows (Q95). The relationship between summer Q10 and autumn LIFE score was steeper than the relationship between winter Q10 and spring LIFE score. Bed and bank resectioning reduced overall LIFE and increased the steepness of the response of LIFE to low (Q95) flow. 5.The models derived may be used to guide environmental flow allocations and to quantify the relative influence of flow and physical habitat change on macroinvertebrate responses. The interaction between resectioning and low flow has particular implications for the conservation of macroinvertebrate taxa with requirements for faster flowing water. Copyright © 2010 John Wiley & Sons, Ltd. [source] Integrating ecology with hydromorphology: a priority for river science and managementAQUATIC CONSERVATION: MARINE AND FRESHWATER ECOSYSTEMS, Issue 1 2009I.P. Vaughan Abstract 1.The assessment of links between ecology and physical habitat has become a major issue in river research and management. Key drivers include concerns about the conservation implications of human modifications (e.g. abstraction, climate change) and the explicit need to understand the ecological importance of hydromorphology as prescribed by the EU's Water Framework Directive. Efforts are focusing on the need to develop ,eco-hydromorphology' at the interface between ecology, hydrology and fluvial geomorphology. Here, the scope of this emerging field is defined, some research and development issues are suggested, and a path for development is sketched out. 2.In the short term, major research priorities are to use existing literature or data better to identify patterns among organisms, ecological functions and river hydromorphological character. Another early priority is to identify model systems or organisms to act as research foci. In the medium term, the investigation of pattern,processes linkages, spatial structuring, scaling relationships and system dynamics will advance mechanistic understanding. The effects of climate change, abstraction and river regulation, eco-hydromorphic resistance/resilience, and responses to environmental disturbances are likely to be management priorities. Large-scale catchment projects, in both rural and urban locations, should be promoted to concentrate collaborative efforts, to attract financial support and to raise the profile of eco-hydromorphology. 3.Eco-hydromorphological expertise is currently fragmented across the main contributory disciplines (ecology, hydrology, geomorphology, flood risk management, civil engineering), potentially restricting research and development. This is paradoxical given the shared vision across these fields for effective river management based on good science with social impact. A range of approaches is advocated to build sufficient, integrated capacity that will deliver science of real management value over the coming decades. Copyright © 2007 John Wiley & Sons, Ltd. [source] Winds of time and place: How context has affected a 50,year marriagePERSONAL RELATIONSHIPS, Issue 3 2003George Levinger To examine the effects of contexts on a relationship, we consider the case of our own 50,year marriage and its preliminaries. We employ a three,level conception of a couple's environment. The macrocontext refers to the prevailing cultural winds in a society that affect all its residents during any given historical era. The mesocontext pertains to the settings in which a particular relationship operates, such as its family and other social networks, physical habitats, work settings, or institutional associations, often chosen by the partners themselves. The microcontext is the pair's own intimate environment, constructed over time by the partners' unique interactions. Each of these contexts has affected us. We describe and analyze instances of luck, choice, and dyadic interaction in our 52,year relationship. [source] | |||||||||||||