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Photosynthesis Model (photosynthesi + model)

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Life Sciences	100%

Selected Abstracts

Net primary productivity mapped for Canada at 1-km resolution

GLOBAL ECOLOGY, Issue 2 2002
J Liu
Abstract Aim To map net primary productivity (NPP) over the Canadian landmass at 1-km resolution. Location Canada. Methods A simulation model, the Boreal Ecosystem Productivity Simulator (BEPS), has been developed. The model uses a sunlit and shaded leaf separation strategy and a daily integration scheme in order to implement an instantaneous leaf-level photosynthesis model over large areas. Two key driving variables, leaf area index (every 10 days) and land cover type (annual), are derived from satellite measurements of the Advanced Very High Resolution Radiometer (AVHRR). Other spatially explicit input data are also prepared, including daily meteorological data (radiation, precipitation, temperature, and humidity), available soil water holding capacity (AWC) and forest biomass. The model outputs are compared with ground plot data to ensure that no significant systematic biases are created. Results The simulation results show that Canada's annual net primary production was 1.22 Gt C year,1 in 1994, 78% attributed to forests, mainly the boreal forest, without considering the contribution of the understorey. The NPP averaged over the entire landmass was ~140 g C m,2 year,1 in 1994. Geographically, NPP varied greatly among ecozones and provinces/territories. The seasonality of NPP is characterized by strong summer photosynthesis capacities and a short growing season in northern ecosystems. Conclusions This study is the first attempt to simulate Canada-wide NPP with a process-based model at 1-km resolution and using a daily step. The statistics of NPP are therefore expected to be more accurate than previous analyses at coarser spatial or temporal resolutions. The use of remote sensing data makes such simulations possible. BEPS is capable of integrating the effects of climate, vegetation, and soil on plant growth at a regional scale. BEPS and its parameterization scheme and products can be a basis for future studies of the carbon cycle in mid-high latitude ecosystems. [source]

Modelling canopy CO2 fluxes: are ,big-leaf' simplifications justified?

GLOBAL ECOLOGY, Issue 6 2001
A. D. Friend
Abstract 1The ,big-leaf' approach to calculating the carbon balance of plant canopies is evaluated for inclusion in the ETEMA model framework. This approach assumes that canopy carbon fluxes have the same relative responses to the environment as any single leaf, and that the scaling from leaf to canopy is therefore linear. 2A series of model simulations was performed with two models of leaf photosynthesis, three distributions of canopy nitrogen, and two levels of canopy radiation detail. Leaf- and canopy-level responses to light and nitrogen, both as instantaneous rates and daily integrals, are presented. 3Observed leaf nitrogen contents of unshaded leaves are over 40% lower than the big-leaf approach requires. Scaling from these leaves to the canopy using the big-leaf approach may underestimate canopy photosynthesis by ~20%. A leaf photosynthesis model that treats within-leaf light extinction displays characteristics that contradict the big-leaf theory. Observed distributions of canopy nitrogen are closer to those required to optimize this model than the homogeneous model used in the big-leaf approach. 4It is theoretically consistent to use the big-leaf approach with the homogeneous photosynthesis model to estimate canopy carbon fluxes if canopy nitrogen and leaf area are known and if the distribution of nitrogen is assumed optimal. However, real nitrogen profiles are not optimal for this photosynthesis model, and caution is necessary in using the big-leaf approach to scale satellite estimates of leaf physiology to canopies. Accurate prediction of canopy carbon fluxes requires canopy nitrogen, leaf area, declining nitrogen with canopy depth, the heterogeneous model of leaf photosynthesis and the separation of sunlit and shaded leaves. The exact nitrogen profile is not critical, but realistic distributions can be predicted using a simple model of canopy nitrogen allocation. [source]

Using combined measurements of gas exchange and chlorophyll fluorescence to estimate parameters of a biochemical C3 photosynthesis model: a critical appraisal and a new integrated approach applied to leaves in a wheat (Triticum aestivum) canopy

PLANT CELL & ENVIRONMENT, Issue 5 2009
XINYOU YIN
ABSTRACT We appraised the literature and described an approach to estimate the parameters of the Farquhar, von Caemmerer and Berry model using measured CO2 assimilation rate (A) and photosystem II (PSII) electron transport efficiency (,2). The approach uses curve fitting to data of A and ,2 at various levels of incident irradiance (Iinc), intercellular CO2 (Ci) and O2. Estimated parameters include day respiration (Rd), conversion efficiency of Iinc into linear electron transport of PSII under limiting light [,2(LL)], electron transport capacity (Jmax), curvature factor (,) for the non-rectangular hyperbolic response of electron flux to Iinc, ribulose 1·5-bisphosphate carboxylase/oxygenase (Rubisco) CO2/O2 specificity (Sc/o), Rubisco carboxylation capacity (Vcmax), rate of triose phosphate utilization (Tp) and mesophyll conductance (gm). The method is used to analyse combined gas exchange and chlorophyll fluorescence measurements on leaves of various ages and positions in wheat plants grown at two nitrogen levels. Estimated Sc/o (25 °C) was 3.13 mbar µbar,1; Rd was lower than respiration in the dark; Jmax was lower and , was higher at 2% than at 21% O2; ,2(LL), Vcmax, Jmax and Tp correlated to leaf nitrogen content; and gm decreased with increasing Ci and with decreasing Iinc. Based on the parameter estimates, we surmised that there was some alternative electron transport. [source]

The effect of temperature on C4 -type leaf photosynthesis parameters

PLANT CELL & ENVIRONMENT, Issue 9 2007
RAIA-SILVIA MASSAD
ABSTRACT C4 -type photosynthesis is known to vary with growth and measurement temperatures. In an attempt to quantify its variability with measurement temperature, the photosynthetic parameters , the maximum catalytic rate of the enzyme ribulose 1·5-bisphosphate carboxylase/oxygenase (Rubisco) (Vcmax), the maximum catalytic rate of the enzyme phosphoenolpyruvate carboxylase (PEPC) (Vpmax) and the maximum electron transport rate (Jmax) , were examined. Maize plants were grown in climatic-controlled phytotrons, and the curves of net photosynthesis (An) versus intercellular air space CO2 concentrations (Ci), and An versus photosynthetic photon flux density (PPFD) were determined over a temperature range of 15,40 °C. Values of Vcmax, Vpmax and Jmax were computed by inversion of the von Caemmerer & Furbank photosynthesis model. Values of Vpmax and Jmax obtained at 25 °C conform to values found in the literature. Parameters for an Arrhenius equation that best fits the calculated values of Vcmax, Vpmax and Jmax are then proposed. These parameters should be further tested with C4 plants for validation. Other model key parameters such as the mesophyll cell conductance to CO2 (gi), the bundle sheath cells conductance to CO2 (gbs) and Michaelis,Menten constants for CO2 and O2 (Kc, Kp and Ko) also vary with temperature and should be better parameterized. [source]

On the need to incorporate sensitivity to CO2 transfer conductance into the Farquhar,von Caemmerer,Berry leaf photosynthesis model

PLANT CELL & ENVIRONMENT, Issue 2 2004
G. J. ETHIER
ABSTRACT Virtually all current estimates of the maximum carboxylation rate (Vcmax) of ribulose-1,5-bisphosphate carboxylase/oxygenase (Rubisco) and the maximum electron transport rate (Jmax) for C3 species implicitly assume an infinite CO2 transfer conductance (gi). And yet, most measurements in perennial plant species or in ageing or stressed leaves show that gi imposes a significant limitation on photosynthesis. Herein, we demonstrate that many current parameterizations of the photosynthesis model of Farquhar, von Caemmerer & Berry (Planta 149, 78,90, 1980) based on the leaf intercellular CO2 concentration (Ci) are incorrect for leaves where gi limits photosynthesis. We show how conventional A,Ci curve (net CO2 assimilation rate of a leaf ,An, as a function of Ci) fitting methods which rely on a rectangular hyperbola model under the assumption of infinite gi can significantly underestimate Vcmax for such leaves. Alternative parameterizations of the conventional method based on a single, apparent Michaelis,Menten constant for CO2 evaluated at Ci[Km(CO2)i] used for all C3 plants are also not acceptable since the relationship between Vcmax and gi is not conserved among species. We present an alternative A,Ci curve fitting method that accounts for gi through a non-rectangular hyperbola version of the model of Farquhar et al. (1980). Simulated and real examples are used to demonstrate how this new approach eliminates the errors of the conventional A,Ci curve fitting method and provides Vcmax estimates that are virtually insensitive to gi. Finally, we show how the new A,Ci curve fitting method can be used to estimate the value of the kinetic constants of Rubisco in vivo is presented [source]