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Phosphonate Ester (phosphonate + ester)
Selected AbstractsNon-Tethered Organometallic Phosphonate Inhibitors for Lipase Inhibition: Positioning of the Metal Center in the Active Site of Cutinase,,EUROPEAN JOURNAL OF INORGANIC CHEMISTRY, Issue 28 2008Cornelis A. Kruithof Abstract Organometallic NCN-pincer complexes, bearing either a p -nitrophenyl phosphonate ester or a phosphonic acid group directly attached to the aromatic ring of the pincer complex, were synthesized. These compounds were tested as covalent inhibitors for the lipase cutinase. In a stoichiometric reaction of the NCN-pincer platinum phosphonate p -nitrophenyl ester 2 with cutinase, a 94,% conversion to the protein,pincer metal complex hybrid was obtained in 48 h. The NCN-pincer metal phosphonic acid derivatives (3, 4) appeared to be inactive as cutinase inhibitors. In contrast to our previous work which entails propyl tethered phosphonate esters connected to pincer metal complexes, the presented strategy allows positioning of metal complexes inside the active site of lipases. This opens up the possibility for fine-tuning the chemical environment (second coordination sphere) around a synthetic metal center inside the pocket of an enzyme for diagnostic and catalytic purposes.(© Wiley-VCH Verlag GmbH & Co. KGaA, 69451 Weinheim, Germany, 2008) [source] Broadly distributed nucleophilic reactivity of proteins coordinated with specific ligand binding activityJOURNAL OF MOLECULAR RECOGNITION, Issue 4 2005Yasuhiro Nishiyama Abstract Covalent nucleophile,electrophile interactions have been established to be important for recognition of substrates by several enzymes. Here, we employed an electrophilic amidino phosphonate ester (EP1) to study the nucleophilic reactivity of the following proteins: albumin, soluble epidermal growth factor receptor (sEGFR), soluble CD4 (sCD4), calmodulin, casein, ,-lactalbumin, ovalbumin, soybean trypsin inhibitor and HIV-1 gp120. Except for soybean trypsin inhibitor and ,-lactalbumin, these proteins formed adducts with EP1 that were not dissociated by denaturing treatments. Despite their negligible proteolytic activity, gp120, sEGFR and albumin reacted irreversibly with EP1 at rates comparable to the serine protease trypsin. The neutral counterpart of EP1 reacted marginally with the proteins, indicating the requirement for a positive charge close to the electrophilic group. Prior heating resulted in altered rates of formation of the EP1,protein adducts accompanied by discrete changes in the fluorescence emission spectra of the proteins, suggesting that the three-dimensional protein structure governs the nucleophilic reactivity. sCD4 and vasoactive intestinal peptide (VIP) containing phosphonate groups (EP3 and EP4, respectively) reacted with their cognate high-affinity binding proteins gp120 and calmodulin, respectively, at rates exceeding the corresponding reactions with EP1. Reduced formation of EP3,gp120 adducts and EP4,calmodulin adducts in the presence of sCD4 and VIP devoid of the phosphonate groups was evident, suggesting that the nucleophilic reactivity is expressed in coordination with non-covalent recognition of peptide determinants. These observations suggest the potential of EPs for specific and covalent targeting of proteins, and raise the possibility of nucleophile,electrophile pairing as a novel mechanism stabilizing protein,protein complexes. Copyright © 2005 John Wiley & Sons, Ltd. [source] A Novel Genetic Selection System for Improved Enantioselectivity of Bacillus subtilis Lipase ACHEMBIOCHEM, Issue 7 2008Ykelien L. Boersma Dr. Abstract In directed evolution experiments, success often depends on the efficacy of screening or selection methods. Genetic selections have proven to be extremely valuable for evolving enzymes with improved catalytic activity, improved stability, or with altered substrate specificity. In contrast, enantioselectivity is a difficult parameter to select for. In this study, we present a successful strategy that not only selects for catalytic activity, but for the first time also for enantioselectivity, as demonstrated by the selection of Bacillus subtilis lipase A variants with inverted and improved enantioselectivity. A lipase mutant library in an aspartate auxotroph Escherichia coli was plated on minimal medium that was supplemented with the aspartate ester of the desired enantiomer (S)-(+)-1,2- O -isopropylidene- sn -glycerol. To inhibit growth of less enantioselective variants, a covalently binding phosphonate ester of the opposite (R)-(,)-1,2- O -isopropylidene- sn -glycerol enantiomer was added as well. After three selection rounds in which the selection pressure was increased by raising the phosphonate ester concentration, a mutant was selected with an improved enantioselectivity increased from an ee of ,29.6,% (conversion 23.4,%) to an ee of +73.1,% (conversion 28.9,%) towards the (S)-(+)-enantiomer. Interestingly, its amino acid sequence showed that the acid of the catalytic triad had migrated to a position further along the loop that connects ,7 and ,E; this shows that the position of the catalytic acid is not necessarily conserved in this lipase. [source] Non-Tethered Organometallic Phosphonate Inhibitors for Lipase Inhibition: Positioning of the Metal Center in the Active Site of Cutinase,,EUROPEAN JOURNAL OF INORGANIC CHEMISTRY, Issue 28 2008Cornelis A. Kruithof Abstract Organometallic NCN-pincer complexes, bearing either a p -nitrophenyl phosphonate ester or a phosphonic acid group directly attached to the aromatic ring of the pincer complex, were synthesized. These compounds were tested as covalent inhibitors for the lipase cutinase. In a stoichiometric reaction of the NCN-pincer platinum phosphonate p -nitrophenyl ester 2 with cutinase, a 94,% conversion to the protein,pincer metal complex hybrid was obtained in 48 h. The NCN-pincer metal phosphonic acid derivatives (3, 4) appeared to be inactive as cutinase inhibitors. In contrast to our previous work which entails propyl tethered phosphonate esters connected to pincer metal complexes, the presented strategy allows positioning of metal complexes inside the active site of lipases. This opens up the possibility for fine-tuning the chemical environment (second coordination sphere) around a synthetic metal center inside the pocket of an enzyme for diagnostic and catalytic purposes.(© Wiley-VCH Verlag GmbH & Co. KGaA, 69451 Weinheim, Germany, 2008) [source] Diastereoselective synthesis of chloro- and fluoro-aniline containing phosphonate esters in a three-component condensationHETEROATOM CHEMISTRY, Issue 4 2010Malek Taher Maghsoodlou New phosphonate ester derivatives were obtained by in situ stereo-specific reaction between triphenyl phosphite and dialkyl acetylenedicarboxylates in the presence of a series of halogenated anilines. Spectroscopic data and X-ray crystallography analysis are in agreement with the gauche arrangement for the two vicinal protons in the structures. © 2010 Wiley Periodicals, Inc. Heteroatom Chem 21:222,227, 2010; Published online in Wiley InterScience (www.interscience.wiley.com). DOI 10.1002/hc.20600 [source] Highly Conjugated p -Quinonoid ,-Extended Tetrathiafulvalene Derivatives: A Class of Highly Distorted Electron DonorsCHEMISTRY - A EUROPEAN JOURNAL, Issue 8 2004Marta C. Díaz Abstract A new class of ,-extended TTF-type electron donors (11,a,c) has been synthesized by Wittig,Horner olefination of bianthrone (9) with 1,3-dithiole phosphonate esters (10,a,c). In cyclic voltammetry experiments, donors 11,a,c reveal a single, electrochemically irreversible oxidation,yielding the corresponding dicationic products,at relatively low oxidation potentials (,0.7,0.8 V). Theoretical calculations, performed at the DFT level (B3,P86/6-31,G*), predict a highly-folded C2h structure for 11,a. In the ground state, the molecule adopts a double saddle-like conformation to compensate the steric hindrance. The calculations suggest that the intramolecular charge transfer associated with the HOMO,LUMO transition is responsible for an absorption band observed above 400 nm. While the radical cation 11,a.+ retains the folded C2h structure predicted for the neutral molecule as the most stable conformation, the dication 11,a2+ has a fully aromatic D2 structure, formed by an orthogonal 9,9,-bianthryl central unit to which two singly-charged dithiole rings are attached. The drastic conformational changes that compounds 11 undergo upon oxidation account for their electrochemical properties. By means of pulse radiolysis measurements, radical-induced one-electron oxidation of 11,a,c was shown to lead to the radical cation species (11,a,c.+), which were found to disproportionate with generation of the respective dication species (11,a,c2+) and the neutral molecules (11,a,c). Una nueva familia de moléculas dadoras de electrones de tipo TTF , -extendido, altamente conjugadas, (11,a,c) se han sintetizado mediante la reacción de olefinación de Wittig,Horner de la biantrona (9) con fosfonatos de 1,3-ditiol (10,a,c). En los experimentos de voltamperometría cíclica, los dadores 11,a,c muestran una única onda de oxidación electroquímicamente irreversible,dando lugar a los productos dicatiónicos,a potenciales relativamente bajos (,0.7,0.8 V). Cálculos teóricos, llevados a cabo a nivel DFT (B3,P86/6-31,G*), predicen una estructuraC2haltamente distorsionada para 11,a. La molécula adopta una conformación en forma de doble mariposa para aliviar el impedimento estérico. Los cálculos sugieren que la transferencia de carga intramolecular asociada a la transición HOMO,LUMO es responsable de la banda de absorción observada por encima de 400 nm en el espectro electrónico. El catión radical 11,a.+retiene la estructura C2hplegada predicha para la molécula neutra como la conformación más estable. Por el contrario, el dicatión 11,a2+muestra una estructuraD2totalmente aromática,formada por una unidad central de 9,9,-biantrilo ortogonal, unida a los anillos cargados de ditiol. Los profundos cambios conformacionales que experimentan los compuestos 11 tras la oxidación explican sus propiedades electroquímicas. Medidas de radiólisis de pulso, esto es, la oxidación monoelectrónica de 11,a,c inducida por radicales, conduce a las especies catión radical (11,a,c.+), las cuales dismutan para generar las respectivas especies dicatiónicas (11,a,c2+) y la molécula neutra (11,a,c). [source] | ||||||||||