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Artificial Selection (artificial + selection)
Terms modified by Artificial Selection Selected AbstractsForage collection, substrate preparation, and diet composition in fungus-growing antsECOLOGICAL ENTOMOLOGY, Issue 3 2010HENRIK H. DE FINE LICHT 1. Variation and control of nutritional input is an important selective force in the evolution of mutualistic interactions and may significantly affect coevolutionary modifications in partner species. 2. The attine fungus-growing ants are a tribe of more than 230 described species (12 genera) that use a variety of different substrates to manure the symbiotic fungus they cultivate inside the nest. Common ,wisdom' is that the conspicuous leaf-cutting ants primarily use freshly cut plant material, whereas most of the other attine species use dry and partly degraded plant material such as leaf litter and caterpillar frass, but systematic comparative studies of actual resource acquisition across the attine ants have not been done. 3. Here we review 179 literature records of diet composition across the extant genera of fungus-growing ants. The records confirm the dependence of leaf-cutting ants on fresh vegetation but find that flowers, dry plant debris, seeds (husks), and insect frass are used by all genera, whereas other substrates such as nectar and insect carcasses are only used by some. 4. Diet composition was significantly correlated with ant substrate preparation behaviours before adding forage to the fungus garden, indicating that diet composition and farming practices have co-evolved. Neither diet nor preparation behaviours changed when a clade within the paleoattine genus Apterostigma shifted from rearing leucocoprinous fungi to cultivating pterulaceous fungi, but the evolutionary derived transition to yeast growing in the Cyphomyrmex rimosus group, which relies almost exclusively on nectar and insect frass, was associated with specific changes in diet composition. 5. The co-evolutionary transitions in diet composition across the genera of attine ants indicate that fungus-farming insect societies have the possibility to obtain more optimal fungal crops via artificial selection, analogous to documented practice in human subsistence farming. [source] Melanism in a larval Lepidoptera: repeatability and heritability of a dynamic traitECOLOGICAL ENTOMOLOGY, Issue 2 2006Kwang Pum Lee Abstract., 1.,Although it is well established that the deposition of melanin pigment in the cuticle of larval Lepidoptera is influenced by both environmental and genetic factors, few studies have examined intra-individual regional variation in the degree of melanism or the ontogenetic dynamics of this trait. Here, heritable and density-dependent effects on within-individual and stage-specific variation in melanism were examined in caterpillars of the Egyptian cotton leafworm, Spodoptera littoralis (Boisduval). 2.,Using quantitative spectrometric methods, it is shown that cuticular melanism changes dramatically within larval stadia, showing the highest and lowest levels of melanism early (first day) and late (final day) in each larval stadium respectively. However, solitary-reared caterpillars were significantly paler than those reared gregariously at all stages of development and maintained greater levels of variation in melanism. This variation in melanism was repeatable and exhibited a significant heritable component (narrow sense heritability based on offspring,parent regressions: h2 = 0.18,0.30). 3.,The degree of melanism was correlated negatively with larval body weight in solitary caterpillars, but not gregarious ones. Melanism also varied spatially, with the lateral longitudinal band being consistently darker than the dorsal or dorso-lateral bands. Crowd-rearing increased melanism in all regions of larval cuticle, but the extent of crowding-induced melanism was more pronounced in the dorsal and dorso-lateral bands than in the lateral one. 4.,These results indicate that although cuticular melanism is a highly dynamic trait, ontogenetic changes in relative cuticular melanism are both predictable and repeatable within individuals and genotypes. This has implications for our understanding of the evolution of melanism and for applying artificial selection on the basis of colour. [source] Song Learning in Wild and Domesticated Strains of White-Rumped Munia, Lonchura striata, Compared by Cross-Fostering Procedures: Domestication Increases Song Variability by Decreasing Strain-Specific BiasETHOLOGY, Issue 5 2010Miki Takahasi Song diversity results from the interactions between natural selection, sexual selection, and individual learning. To understand song diversity, all three factors must be considered collectively, not separately. Bengalese Finches were domesticated about 250 yr ago. Their courtship songs have become different from their ancestor, the White-rumped Munia. Bengalese Finches sing songs with complex note-to-note transition patterns and with acoustically diverse song notes while White-rumped Munias sing songs with fixed note sequence and mostly broad band song notes. Bengalese Finches were selected for domestication based on their good parenting ability, not their songs, but this artificial selection has nonetheless affected their songs. To test whether divergence occurred not only in the song phenotypes but also in the genetic basis for predisposition of strain specific song learning, we conducted a cross-fostering experiment between Bengalese Finches and White-rumped Munias. In both strains, song learning was affected by rearing condition: the acoustical feature and transition patterns followed those of the foster fathers. However, the accuracy of song learning differed between the wild and the domesticated strains: sharing of song note between sons and tutors in Finches was not very accurate regardless of the tutor, while Munias were highly accurate in copying Munia songs but often omitted song elements from Finch fathers. These results suggest that White-rumped Munias are strongly constrained to learn their own strain's song, and that this constraint was relaxed in the Bengalese Finch by domestication. [source] Rearing Environment Affects the Brain Size of Guppies: Lab-Reared Guppies have Smaller Brains than Wild-Caught GuppiesETHOLOGY, Issue 2 2009James G. Burns Animals bred for captivity often have smaller brains and behave differently than their wild counterparts. These differences in brain size have been attributed to genetic changes resulting from, for example, inbreeding depression and pleiotropic effects of artificial selection for traits such as docility. A critical question, though, is whether these differences in brain size are due to plastic responses to the environment, not just genetic changes. We observed a large reduction in brain size in first generation, lab-reared female guppies compared with wild-caught ones (19% smaller telencephalon, 17% smaller optic tectum). We then reared first-generation, lab-born guppies in environments varying in spatial complexity and size in an attempt to isolate factors that might increase brain size and change temperament, but no significant differences in phenotype were observed. The results of these experiments show that, although the environmental factors responsible for the effect have not been found, even first generation lab-reared individuals can have smaller brains than wild individuals. [source] LEARNING ABILITY AND LONGEVITY: A SYMMETRICAL EVOLUTIONARY TRADE-OFF IN DROSOPHILAEVOLUTION, Issue 6 2008Joep M. S. Burger Learning ability can be substantially improved by artificial selection in animals ranging from Drosophila to rats. Thus these species have not used their evolutionary potential with respect to learning ability, despite intuitively expected and experimentally demonstrated adaptive advantages of learning. This suggests that learning is costly, but this notion has rarely been tested. Here we report correlated responses of life-history traits to selection for improved learning in Drosophila melanogaster. Replicate populations selected for improved learning lived on average 15% shorter than the corresponding unselected control populations. They also showed a minor reduction in fecundity late in life and possibly a minor increase in dry adult mass. Selection for improved learning had no effect on egg-to-adult viability, development rate, or desiccation resistance. Because shortened longevity was the strongest correlated response to selection for improved learning, we also measured learning ability in another set of replicate populations that had been selected for extended longevity. In a classical olfactory conditioning assay, these long-lived flies showed an almost 40% reduction in learning ability early in life. This effect disappeared with age. Our results suggest a symmetrical evolutionary trade-off between learning ability and longevity in Drosophila. [source] Comparative development of fiber in wild and cultivated cottonEVOLUTION AND DEVELOPMENT, Issue 1 2001Wendy L. Applequist SUMMARY One of the most striking examples of plant hairs is the single-celled epidermal seed trichome of cultivated cotton. The developmental morphology of these commercial "fibers" has been well-characterized in Gossypium hirsutum, but little is known about the pattern and tempo of fiber development in wild Gossypium species, all of which have short, agronomically inferior fiber. To identify developmental differences that account for variation in fiber length, and to place these differences in a phylogenetic context, we conducted SEM studies of ovules at and near the time of flowering, and generated growth curves for cultivated and wild diploid and tetraploid species. Trichome initiation was found to be similar in all taxa, with few notable differences in trichome density or early growth. Developmental profiles of the fibers of most wild species are similar, with fiber elongation terminating at about two weeks post-anthesis. In contrast, growth is extended to three weeks in the A- and F-genome diploids. This prolonged elongation period is diagnosed as a key evolutionary event in the origin of long fiber. A second evolutionary innovation is that absolute growth rate is higher in species with long fibers. Domestication of species is associated with a further prolongation of elongation at both the diploid and allopolyploid levels, suggesting the effects of parallel artificial selection. Comparative analysis of fiber growth curves lends developmental support to previous quantitative genetic suggestions that genes for fiber "improvement" in tetraploid cotton were contributed by the agronomically inferior D-genome diploid parent. [source] Rapid evolution in crop-weed hybrids under artificial selection for divergent life historiesEVOLUTIONARY APPLICATIONS (ELECTRONIC), Issue 2 2009Lesley G. Campbell Abstract When species hybridize, offspring typically exhibit reduced fitness and maladapted phenotypes. This situation has biosafety implications regarding the unintended spread of novel transgenes, and risk assessments of crop-wild hybrids often assume that poorly adapted hybrid progeny will not evolve adaptive phenotypes. We explored the evolutionary potential of early generation hybrids using nontransgenic wild and cultivated radish (Raphanus raphanistrum, Raphanus sativus) as a model system. We imposed four generations of selection for two weedy traits , early flowering or large size , and measured responses in a common garden in Michigan, USA. Under selection for early flowering, hybrids evolved to flower as early as wild lineages, which changed little. These early-flowering hybrids also recovered wild-type pollen fertility, suggesting a genetic correlation that could accelerate the loss of crop traits when a short life cycle is advantageous. Under selection for large size at reproduction, hybrids evolved longer leaves faster than wild lineages, a potentially advantageous phenotype under longer growing seasons. Although early generation hybrid offspring have reduced fitness, our findings provide novel support for rapid adaptation in crop-wild hybrid populations. Biosafety risk assessment programs should consider the possibility of rapid evolution of weedy traits from early generations of seemingly unfit crop-wild hybrids. [source] Population genetic analysis of the Brahman cattle (Bos indicus) in Colombia with microsatellite markersJOURNAL OF ANIMAL BREEDING AND GENETICS, Issue 2 2010M.A. Novoa Summary The Brahman is one of the most popular breeds for meat production in the Neotropics. However, genetic studies of the breed in Latin American countries have only recently begun. In total, 178 animals of the Brahman breed from 20 Colombian provinces were genotyped at 11 microsatellite markers with the aim of studying the genetic diversity of this population and its genetic relationships with zebuine and taurine breeds. The outcomes of multivariate analyses, Bayesian inferences and inter-individual genetic distances suggested that there is no genetic sub-structure in the population, because of the high rate of animal migration among provinces. The population shows a high degree of heterozygosity and allelic diversity compared with other breeds, reflecting its multibreed origin. The study of the genetic relationships among the breeds reveals that the Brahman breed belongs to the zebuine group. However, it is the population nearest to taurine breeds with high frequencies of taurine alleles. Intensive artificial selection may have favoured the taurine alleles after the breed was formed. There has also been some degree of mixture with local taurine breeds while the Brahman breed has evolved in Colombia. [source] Genetic interactions between marine finfish species in European aquaculture and wild conspecificsJOURNAL OF APPLIED ICHTHYOLOGY, Issue 4 2001Youngson The principal species of marine aquaculture in Europe are Atlantic salmon (Salmo salar), sea bass (Dicentrarchus labrax) and sea bream (Sparus auratus). For Atlantic salmon and sea bass, a substantial part of total genetic variation is partitioned at the geographical population level. In the case of sea bream, gene flow across the Azores/Mediterranean scale appears to be extensive and population structuring is not detected. For Atlantic salmon and sea bass, natural population structure is at risk from genetic interaction with escaped aquaculture conspecifics. The locally adaptive features of populations are at risk from interbreeding with non-local aquaculture fish. Wild populations, generally, are at risk from interactions with aquaculture fish that have been subject to artificial selection or domestication. Atlantic salmon is the main European aquaculture species and its population genetics and ecology have been well-studied. A general case regarding genetic interactions can be based on the information available for salmon and extended to cover other species, in the appropriate context. A generalized flow chart for interactions is presented. Salmon escape from aquaculture at all life stages, and some survive to breed among wild salmon. Reproductive fitness in the escaped fish is lower than in native, wild fish because of behavioural deficiencies at spawning. However, as the number of salmon in aquaculture greatly exceeds the number of wild fish, even small fractional rates of escape may result in the local presence of large numbers, and high frequencies, of escaped fish. At present, policy and legislation in relation to minimizing genetic interactions between wild and aquaculture fish is best developed for Atlantic salmon, through the recommendations of the Oslo Agreement developed by the North Atlantic Salmon Conservation Organization and subsequent agreements on their implementation. In future, the potential use of genetically modified fish in aquaculture will make additional policy development necessary. Improved containment is recommended as the key to minimizing the numbers and therefore the effects of escaped fish. Emergency recovery procedures are recommended as a back-up measure in the case of containment failure. Reproductive sterility is recommended as a future key to eliminating the genetic potential of escaped fish. The maintenance of robust populations of wild fish is recommended as a key to minimizing the effects of escaped fish on wild populations. [source] Genetic independence of female signal form and male receiver design in the almond moth, Cadra cautellaJOURNAL OF EVOLUTIONARY BIOLOGY, Issue 6 2008J. D. ALLISON Abstract Efficient signalling requires coordination of signal form and receiver design. To maintain signal function, parallel changes in signaller and receiver traits are required. Genetic correlation and co-evolution among signal and response traits have been proposed to preserve signal function (i.e. coordination) during the evolution of mate recognition systems. Empirical studies have provided support for both mechanisms; however, there is debate regarding the interpretation of some of these studies. Tests for a genetic correlation typically hybridize divergent signalling systems and look at hybrid signal form and receiver design, or impose artificial selection on signal form and look for an indirect response to selection in receiver design. Some of the hybridization studies did not achieve reassortment of genes from the parental types, whereas some of the artificial selection studies incorporated random mating in their designs. As a result of these limitations, the hybridization studies cannot discriminate between genetic correlation and co-evolution with primarily additive genetic effects underlying signal and response traits. Similarly, the artificial selection experiments cannot discriminate between genetic correlation because of linkage disequilibrium and co-evolution. This study examined the mating preferences of male almond moths, Cadra cautella, before and after female moths were artificially selected (using a design incorporating assortative mating) for novel pheromone blend ratios. Our results demonstrate the absence of a genetic correlation between signal and response traits in the almond moth. [source] Correlated responses to selection for stress resistance and longevity in a laboratory population of Drosophila melanogasterJOURNAL OF EVOLUTIONARY BIOLOGY, Issue 4 2005O. A. BUBLIY Abstract Laboratory studies on Drosophila have revealed that resistance to one environmental stress often correlates with resistance to other stresses. There is also evidence on genetic correlations between stress resistance, longevity and other fitness-related traits. The present work investigates these associations using artificial selection in Drosophila melanogaster. Adult flies were selected for increased survival after severe cold, heat, desiccation and starvation stresses as well as increased heat-knockdown time and lifespan (CS, HS, DS, SS, KS and LS line sets, respectively). The number of selection generations was 11 for LS, 27 for SS and 21 for other lines, with selection intensity being around 0.80. For each set of lines, the five stress-resistance parameters mentioned above as well as longevity (in a nonstressful environment) were estimated. In addition, preadult developmental time, early age productivity and thorax length were examined in all lines reared under nonstressful conditions. Comparing the selection lines with unselected control revealed clear-cut direct selection responses for the stress-resistance traits. Starvation resistance increased as correlated response in all sets of selection lines, with the exception of HS. Positive correlated responses were also found for survival after cold shock (HS and DS) and heat shock (KS and DS). With regard to values of resistance across different stress assays, the HS and KS lines were most similar. The resistance values of the SS lines were close to those of the LS lines and tended to be the lowest among all selection lines. Developmental time was extended in the SS and KS lines, whereas the LS lines showed a reduction in thorax length. The results indicate a possibility of different multiple-stress-resistance mechanisms for the examined traits and fitness costs associated with stress resistance and longevity. [source] Selection experiments and the study of phenotypic plasticity,JOURNAL OF EVOLUTIONARY BIOLOGY, Issue 6 2002S. M. Scheiner Abstract Laboratory selection experiments are powerful tools for establishing evolutionary potentials. Such experiments provide two types of information, knowledge about genetic architecture and insight into evolutionary dynamics. They can be roughly classified into two types: (1) artificial selection in which the experimenter selects on a focal trait or trait index, and (2) quasi-natural selection in which the experimenter establishes a set of environmental conditions and then allows the population to evolve. Both approaches have been used in the study of phenotypic plasticity. Artificial selection experiments have taken various forms including: selection directly on a reaction norm, selection on a trait in multiple environments, and selection on a trait in a single environment. In the latter experiments, evolution of phenotypic plasticity is investigated as a correlated response. Quasi-natural selection experiments have examined the effects of both spatial and temporal variation. I describe how to carry out such experiments, summarize past efforts, and suggest further avenues of research. [source] Direct and indirect responses to selection on pollen size in Brassica rapa L.JOURNAL OF EVOLUTIONARY BIOLOGY, Issue 3 2001T. S. Sarkissian Pollen size varies little within angiosperm species, but differs extensively between species, suggesting the action of strong selection. Nevertheless, the potential for genetic responses of pollen size to selection, as determined by additive genetic variance and genetic correlations with other floral traits, has received little attention. To assess this potential, we subjected Brassica rapa to artificial selection for large and small pollen during three generations. This selection caused significant divergence in pollen diameter, with additive genetic effects accounting for over 30% of the observed phenotypic variation in pollen size. Such heritable genetic variation suggests that natural selection could effect evolutionary change in this trait. Selection on pollen size also elicited correlated responses in pollen number (,), flower size (+), style length (+), and ovule number (+), suggesting that pollen size cannot evolve independently. The correlated responses of pollen number, flower size and ovule number probably reflect the genetically determined and physically constrained pattern of resource allocation in B. rapa. In contrast, the positive correlation between pollen size and style length may represent a widespread gametic-phase disequilibrium in angiosperms that arises from nonrandom fertilization success of large pollen in pistils with long styles. [source] Direct and correlated responses to selection on age at physiological maturity in Drosophila simulansJOURNAL OF EVOLUTIONARY BIOLOGY, Issue 6 2000D. E. L. Promislow Biologists who study the timing of development in insects have focused on variation in duration of pre-adult stages almost without exception. However, development is not complete until adults are not only morphologically mature, but also reproductively mature. Here we describe an experiment in the fruit fly, Drosophila simulans, in which we used artificial selection to create lines with shortened and lengthened duration from eclosion to the age when the first egg was laid. We found significant genetic variation for this trait. The response to selection on age when the first egg was laid was due to variation among females. Delayed adult development was correlated with rapid pre-adult development and longer life span in females. The approach we use here resolves some difficulties with previous approaches used to study the genetics of senescence, and provides an opportunity to study the hitherto unexamined predictions derived from classic models for the evolution of senescence. [source] About the oldest domesticates among fishesJOURNAL OF FISH BIOLOGY, Issue 2004E. K. Balon Domestication of mammals such as cattle, dogs, pigs and horses preceded that of fishes by at least 10 000 years. The first domesticated fish was the common carp Cyprinus carpio. Initially it was held as an exploited captive and did not undergo major changes in body shape or colour variations. About 2000 years ago, wild common carp were most abundant in the inland delta of the Danube River. These fish were torpedo shaped, golden-yellow in colour and had two pairs of barbels and a mesh-like scale pattern. Large schools of them thrived and reproduced on the flood plains of the Danube. The Romans kept fishes in specially built ponds at that time. The common carp was an ideal candidate and its rearing became more popular in medieval times. Common carp culture gradually became the most profitable branch of agriculture in central Europe and many special ponds were built. Soon common carp were being produced in pond systems including spawning and growing ponds. Unintentional artificial selection had taken place between the 12th and mid-14th century, and deep bodied and variously scaled or scaleless domesticated forms appeared in nearly every pond system. Some colour aberrations appeared in the 1950s in Japan, which, as koi, became the most expensive of fish. Common carp were not originally domesticated in China but wild ,chi'Carassius auratus occasionally appeared as a xanthic form that, as the goldfish, has been known since 960 A.D. By the 1200s the fish were used as ornamental animals in the garden pools of rich landowners. Circa 1276 to 1546, the Chinese began keeping golden chi in aquarium-like vessels and soon rich and poor alike became breeders of the fancy domesticated goldfish. The variously shaped monstrosities and colour aberrants were freaks but they became very fashionable at that time and still are. Domesticated goldfish monstrosities were first exported from China to Japan and much later to Europe and around the world. More recently other species have been domesticated by aquarists, such as the guppy Poecilia reticulata or the neon tetra Paracheirodon innesi. Other fishes kept as ornamentals, like swordtails Xiphophorus hellerii and platies Xiphophorus maculatus, the discus and angelfishes (Cichlidae), as well as those cultured for food like the rainbow trout Oncorhynchus mykiss, channel catfish Ictalurus punctatus or sturgeons (Acipenseridae) are merely exploited captives. [source] Combating plant diseases,the Darwin connectionPEST MANAGEMENT SCIENCE (FORMERLY: PESTICIDE SCIENCE), Issue 11 2009Derek W Hollomon Abstract Although Darwin knew of plant diseases, he did not study them as part of his analysis of natural selection. Effective plant disease control has only been developed after his death. This article explores the relevance of Darwin's ideas to three problem areas with respect to diseases caused by fungi: emergence of new diseases, loss of disease resistance bred into plants and development of fungicide resistance. Darwin's concept of change through natural or artificial selection relied on selection of many small changes, but subsequent genetic research has shown that change can also occur through large steps. Appearance of new diseases can involve gene duplication, transfer or recombination, but all evidence points to both host plant resistance and fungicide susceptibility being overcome through point mutations. Because the population size of diseases such as rusts and powdery and downy mildews is so large, all possible point mutations are likely to occur daily, even during moderate epidemics. Overcoming control measures therefore reflects the overall fitness of these mutants, and much resource effort is being directed towards assessment of their fitness, both in the presence and in the absence of selection. While recent developments in comparative genomics have caused some revision of Darwin's ideas, experience in managing plant disease control measures clearly demonstrates the relevance of concepts he introduced 150 years ago. It also reveals the remarkable speed and the practical impact of adaptation in wild microorganism populations to changes in their environment, and the difficulty of stopping or delaying such adaptation. Copyright © 2009 Society of Chemical Industry [source] Genetic Diversity in Restoration Materials and the Impacts of Seed Collection in Colorado's Restoration Plant Production IndustryRESTORATION ECOLOGY, Issue 3 2007Sierra L. Smith Abstract The ever increasing demand for native plants and seed for use in restoration and revegetation has created a sizable industry. The large-scale production and planting of native plants have given rise to a suite of ecological concerns including collection impacts, genetic diversity, and provenance. This study examines the practices and beliefs of 12 restoration plant production companies in Colorado with regard to arising ecological issues and identifies where further research is needed. We found that native seed collection in Colorado was largely unregulated and unmonitored and impacts were unknown. Maintaining genetic diversity in restoration materials is costly and does not have universal support. The use of provenance material (or local ecotypes) was hotly contested with strong and sound arguments on both sides of the issue. Procurement of pure ecotypes was difficult because of the variety of institutions involved in production and complications such as artificial selection and cross-pollination. [source] Characterization of a QTL region affecting clinical mastitis and protein yield on BTA6ANIMAL GENETICS, Issue 5 2009H. Nilsen Summary Quantitative trait loci affecting clinical mastitis were detected and fine mapped to a narrow region on bovine chromosome 6 in the Norwegian Red cattle population. The region includes the casein gene cluster and several candidate genes thought to influence clinical mastitis. The most significant results were found for SNPs within the Mucin 7 gene. This gene encodes an antimicrobial peptide and constitutes part of the first line of defence for the mucosal immune system. Detection of long haplotypes extending several Mb may indicate that artificial selection has influenced the haplotype structures in the region. A search for selection sweeps supports this observation and coincides with association results found both by single SNP and haplotype analyses. Our analyses identified haplotypes carrying quantitative trait loci alleles associated with high protein yield and simultaneously fewer incidences of clinical mastitis. The fact that such haplotypes are found in relative high frequencies in Norwegian Red may reflect the combined breeding goal that is characterized by selection for both milk production and disease resistance. The identification of these haplotypes raises the possibility of overcoming the unfavourable genetic correlation between these traits through haplotype-assisted selection. [source] A genome map of divergent artificial selection between Bos taurus dairy cattle and Bos taurus beef cattleANIMAL GENETICS, Issue 2 2009B. J. Hayes Summary A number of cattle breeds have become highly specialized for milk or beef production, following strong artificial selection for these traits. In this paper, we compare allele frequencies from 9323 single nucleotide polymorphism (SNP) markers genotyped in dairy and beef cattle breeds averaged in sliding windows across the genome, with the aim of identifying divergently selected regions of the genome between the production types. The value of the method for identifying selection signatures was validated by four sources of evidence. First, differences in allele frequencies between dairy and beef cattle at individual SNPs were correlated with the effects of those SNPs on production traits. Secondly, large differences in allele frequencies generally occurred in the same location for two independent data sets (correlation 0.45) between sliding window averages. Thirdly, the largest differences in sliding window average difference in allele frequencies were found on chromosome 20 in the region of the growth hormone receptor gene, which carries a mutation known to have an effect on milk production traits in a number of dairy populations. Finally, for the chromosome tested, the location of selection signatures between dairy and beef cattle was correlated with the location of selection signatures within dairy cattle. [source] The origin of selection signatures on bovine chromosome 6ANIMAL GENETICS, Issue 2 2008B. J. Hayes Summary The extent and pattern of linkage disequilibrium (LD) between closely spaced markers contain information about population history, including past population size and selection history. Selection signatures can be identified by comparing the LD surrounding a putative selected allele at a locus to the putative non-selected allele. In livestock populations, locations of selection signatures identified in this way should be correlated with QTL affecting production traits, as the populations have been under strong artificial selection for these traits. We used a dense SNP map of bovine chromosome 6 to characterize the pattern of LD on this chromosome in Norwegian Red cattle, a breed which has been strongly selected for milk production. The pattern of LD was generally consistent with strong selection in regions containing QTL affecting milk production traits, including a strong selection signature in a region containing a mutation known to affect milk production. The results demonstrate that in livestock populations, the origin of selection signatures will often be QTL for livestock production traits, and illustrate the value of selection signatures in uncovering new mutations with potential effects on quantitative traits. [source] High genetic divergence in miniature breeds of Japanese native chickens compared to Red Junglefowl, as revealed by microsatellite analysisANIMAL GENETICS, Issue 1 2008R. Tadano Summary A wide diversity of domesticated chicken breeds exist due to artificial selection on the basis of human interests. Miniature variants (bantams) are eminently illustrative of the large changes from ancestral junglefowls. In this report, the genetic characterization of seven Japanese miniature chicken breeds and varieties, together with institute-kept Red Junglefowl, was conducted by means of typing 40 microsatellites located on 21 autosomes. We drew focus to genetic differentiation between the miniature chicken breeds and Red Junglefowl in particular. A total of 305 alleles were identified: 27 of these alleles (8.9%) were unique to the Red Junglefowl with high frequencies (>20%). Significantly high genetic differences (FST) were obtained between Red Junglefowl and all other breeds with a range of 0.3901,0.5128. Individual clustering (constructed from combinations of the proportion of shared alleles and the neighbour-joining method) indicated high genetic divergence among breeds including Red Junglefowl. There were also individual assignments on the basis of the Bayesian and distance-based approaches. The microsatellite differences in the miniature chicken breeds compared to the presumed wild ancestor reflected the phenotypic diversity among them, indicating that each of these miniature chicken breeds is a unique gene pool. [source] Indigenous domestic breeds as reservoirs of genetic diversity: the Argentinean Creole cattleANIMAL GENETICS, Issue 5 2001G. Giovambattista Contrary to highly selected commercial breeds, indigenous domestic breeds are composed of semi-wild or feral populations subjected to reduced levels of artificial selection. As a consequence, many of these breeds have become locally adapted to a wide range of environments, showing high levels of phenotypic variability and increased fitness under natural conditions. Genetic analyses of three loci associated with milk production (,S1 -casein, , -casein and prolactin) and the locus BoLA-DRB3 of the major histocompatibility complex indicated that the Argentinean Creole cattle (ACC), an indigenous breed from South America, maintains high levels of genetic diversity and population structure. In contrast to the commercial Holstein breed, the ACC showed considerable variation in heterozygosity (He) and allelic diversity (A) across populations. As expected, bi-allelic markers showed extensive variation in He whereas the highly polymorphic BoLA-DRB3 showed substantial variation in A, with individual populations having 39,74% of the total number of alleles characterized for the breed. An analysis of molecular variance (AMOVA) of nine populations throughout the distribution range of the ACC revealed that 91.9,94.7% of the total observed variance was explained by differences within populations whereas 5.3,8.1% was the result of differences among populations. In addition, the ACC breed consistently showed higher levels of genetic differentiation among populations than Holstein. Results from this study emphasize the importance of population genetic structure within domestic breeds as an essential component of genetic diversity and suggest that indigenous breeds may be considered important reservoirs of genetic diversity for commercial domestic species. [source] Direct and correlated responses to artificial selection on flight activity in the oriental fruit moth (Lepidoptera: Tortricidae)BIOLOGICAL JOURNAL OF THE LINNEAN SOCIETY, Issue 4 2010MARCO V. G. TORRIANI The ability of a sufficient number of individuals to disperse is crucial for long-term survival of populations. However, dispersal is often energetically costly, and thus is expected to trade-off against other life-history traits. In insect pest species, the occurrence of individuals with high flight activity challenges management practices. We performed artificial selection on flight activity and measured correlated responses to selection in the oriental fruit moth, Grapholita (= Cydia) molesta, a widely distributed and expanding lepidopteran pest of fruit crops. Both sexes rapidly responded to the imposed regime of divergent selection, indicating an adaptive potential of flight activity in this species. Upward-selected moths died sooner than downward-selected ones, providing evidence for a cost of flight activity to adult survival, reputedly associated with enhanced metabolic rates. Oppositely-selected females had similar total reproductive output, disproving a trade-off between dispersal and reproduction, although females with higher flight activity laid their eggs sooner. The ratio of body weight to forewing surface (forewing loading) did not significantly differ between selected lines. The present study contributes to the understanding of dispersal evolution, and also provides new insights into life-history theory as well as important baseline data for the improvement of pest management practices. © 2010 The Linnean Society of London, Biological Journal of the Linnean Society, 2010, 100, 879,889. [source] Direct and correlated responses to selection for longevity in Drosophila buzzatiiBIOLOGICAL JOURNAL OF THE LINNEAN SOCIETY, Issue 4 2009ALEJANDRA C. SCANNAPIECO The possible associations between longevity, early fecundity, and stress-resistance traits were explored using artificial selection on longevity in a laboratory population of Drosophila buzzatii. Three replicated lines were selected for increased lifespan (L lines) and compared with the respective unselected controls (C lines) after the 14th generation of selection. Mean longevity exhibited a significant response to selection. The baseline mortality tended to decrease in the L lines and a negative correlated response to longevity selection was found for early fecundity. Egg-to-adult developmental time increased in L lines. Longevity selection increased stress resistance for both high and low temperatures, as measured by heat knockdown resistance and chill-coma recovery. Starvation resistance also tended to be higher in L than in C lines. The results obtained are consistent with the hypothesis of trade-offs between longevity and early fecundity, and also suggest a trade-off association between adult longevity and developmental time. Correlated selection responses were generally consistent with correlations among the traits previously inferred from altitudinal clines for longevity and stress-resistance phenotypes. © 2009 The Linnean Society of London, Biological Journal of the Linnean Society, 2009, 97, 738,748. [source] | ||||||||||||||||