Home About us Contact
|
Home About us Contact | ||
|
|
||
Parentage
Terms modified by Parentage Selected AbstractsParentage of low-grade metasediments in the Sanbagawa belt, eastern Shikoku, Southwest Japan, and its geotectonic implicationsISLAND ARC, Issue 3 2010Kazuo KiminamiArticle first published online: 19 AUG 2010 Abstract This study examines the geology of low-grade (chlorite zone) metamorphic rocks in the Sanbagawa belt and of a Jurassic accretionary complex in the Northern Chichibu belt, eastern Shikoku, Japan. The bulk chemistries of metasandstones and metapelites in the Sanbagawa belt of eastern Shikoku are examined in order to determine their parentage. The Sanbagawa belt can be divided into northern and southern parts based on lithology and geologic structure. Geochemical data indicate that metasediments in the northern and southern parts are the metamorphic equivalents of the KS-II (Coniacian,Campanian) and KS-I (late Albian,early Coniacian) units of the Shimanto belt, respectively. The depositional ages of the parent sediments of low-grade metamorphic rocks found in the Sanbagawa belt and the Jurassic Northern Chichibu belt, indicate a north-younging polarity. In contrast, sedimentological evidence indicates younging to the south. These observations suggest that a tectonic event has resulted in a change from a northerly to southerly dip direction for schistosity and bedding in the Sanbagawa and Northern Chichibu belts of eastern Shikoku. The younging polarity observed in the Sanbagawa and Northern Chichibu belts, together with previously reported data on vitrinite reflectance and geological structure, indicate that the Northern Chichibu belt was part of the overburden formerly lying on top of the Sanbagawa low-grade metamorphic rocks. [source] Parentage versus two-generation analyses for estimating pollen-mediated gene flow in plant populationsMOLECULAR ECOLOGY, Issue 8 2005JAROSLAW BURCZYK Abstract Assessment of contemporary pollen-mediated gene flow in plants is important for various aspects of plant population biology, genetic conservation and breeding. Here, through simulations we compare the two alternative approaches for measuring pollen-mediated gene flow: (i) the neighborhood model , a representative of parentage analyses, and (ii) the recently developed twogener analysis of pollen pool structure. We investigate their properties in estimating the effective number of pollen parents (Nep) and the mean pollen dispersal distance (,). We demonstrate that both methods provide very congruent estimates of Nep and ,, when the methods' assumptions considering the shape of pollen dispersal curve and the mating system follow those used in data simulations, although the neighborhood model exhibits generally lower variances of the estimates. The violations of the assumptions, especially increased selfing or long-distance pollen dispersal, affect the two methods to a different degree; however, they are still capable to provide comparable estimates of Nep. The neighborhood model inherently allows to estimate both self-fertilization and outcrossing due to the long-distance pollen dispersal; however, the twogener method is particularly sensitive to inflated selfing levels, which in turn may confound and suppress the effects of distant pollen movement. As a solution we demonstrate that in case of twogener it is possible to extract the fraction of intraclass correlation that results from outcrossing only, which seems to be very relevant for measuring pollen-mediated gene flow. The two approaches differ in estimation precision and experimental efforts but they seem to be complementary depending on the main research focus and type of a population studied. [source] Good Ethics Requires Good Science: Why Transplant Programs Should NOT Disclose Misattributed ParentageAMERICAN JOURNAL OF TRANSPLANTATION, Issue 4 2010L. F. Ross In 1996, I argued that the recommendation by the Institute of Medicine (IOM) to inform women when tests reveal misattributed paternity and not to disclose this information to the women's partners was morally wrong. I argued in favor of disclosure to both parties. It is a position that I still hold. But claims of misattributed paternity are not ,incidental findings' as it was called in the old genetics literature, but a rather serious indictment of biological infidelity. In this paper I argue that the tests used by transplant programs for living donor,recipient compatibility are inadequate to accurately determine misattributed paternity. Further I argue that it is not the responsibility of the transplant community to undertake such serious forensic evaluations. Genetic inconsistencies in ABO and HLA inheritance should be reported as variations. Families who want further clarification should be referred to a genetic professional. [source] Working with Children of Mixed ParentageCHILDREN & SOCIETY, Issue 5 2006Patrice Lawrence No abstract is available for this article. [source] Placing Progress: Contextual Inequality and Immigrant Incorporation in the United StatesECONOMIC GEOGRAPHY, Issue 3 2008Jamie Goodwin-White Abstract This article contributes to the growing body of research on the economic incorporation of immigrants by considering the relative wages of immigrants, the adult children of immigrants, and the U.S.-born children of U.S. parentage. By disaggregating these three groups racially, comparing entire wage distributions, and comparing the immigrant cities of New York and Los Angeles with the United States overall, it presents a perspective on the complicated contexts of the intergenerational progress of immigrants. In addition to comparing the groups' relative positions in 1990 and 2000, the article decomposes relative wages such that differences in the educational composition of groups can be isolated from residual wage inequality. This research is of interest because consideration of the U.S.-born or educated children of immigrants invokes questions of social mobility and the persistence of ethnic inequality more generally. The article also contributes to a theoretical debate over place and immigrants' progress by examining the second generation, for whom residence in immigrant cities is often theorized as detrimental to economic incorporation. Finally, it introduces a substantial analysis of local wage structures to questions of immigrants' intergenerational economic progress to a much greater extent than has previously been the case. The results suggest that prospects for immigrants' economic incorporation are geographically specific and should be assessed across multiple generations as a result of the continuing contexts of racial wage inequality [source] DISASSORTATIVE MATING, SEXUAL SPECIALIZATION, AND THE EVOLUTION OF GENDER DIMORPHISM IN HETERODICHOGAMOUS ACER OPALUSEVOLUTION, Issue 7 2008Gabriela Gleiser In sexually polymorphic species, the morphs are maintained by frequency-dependent selection through disassortative mating. In heterodichogamous populations in which disassortative mating occurs between the protandrous and protogynous morphs, a decrease in female fitness in one morph is hypothesized to drive sexual specialization in the other morph, resulting in dimorphic populations. We test these ideas in a population of the heterodichogamous species, Acer opalus. We assessed both prospective gender of individuals in terms of their allocations and actual parentage using microsatellites; we found that most matings in A. opalus occur disassortatively. We demonstrate that the protogynous morph is maintained by frequency-dependent selection, but that maintenance of males versus protandrous individuals depends on their relative siring success, which changes yearly. Seeds produced later in the reproductive season were smaller than those produced earlier; this should compromise reproduction through ovules in protandrous individuals, rendering them male biased in gender. Time-dependent gender and paternity analyses indicate that the sexual morphs are specialized in their earlier sexual functions, mediated by the seasonal decrease in seed size. Our results confirm that mating patterns are context-dependent and change seasonally, suggesting that sexual specialization can be driven by seasonal effects on fitness gained through one of the two sexual functions. [source] SPERM DONOR OR THWARTED FATHER?FAMILY COURT REVIEW, Issue 2 2009HOW WRITTEN AGREEMENT STATUTES ARE CHANGING THE WAY COURTS RESOLVE LEGAL PARENTAGE ISSUES IN ASSISTED REPRODUCTION CASES In recent years, the use of assisted reproduction has risen dramatically in the United States, allowing individuals who face various reproductive challenges, including infertility or absence of a heterosexual partner, to conceive biological children. While assisted reproduction has expanded to meet the needs of these parents, the legal system remains years behind, often leading to complicated child custody disputes between the parties. State legislatures have responded to the call for increased regulation of legal parentage in assisted reproduction in varying ways, although one popular statutory approach requires a known sperm provider to preserve his intention to parent in a written agreement with the woman. This article will argue that written agreement statutes are an effective means for resolving parentage disputes because of their ability to protect pre-insemination intent and encourage private ordering of conflicts among the parties. These issues will be explored through the lens of a recent case decided by the Kansas Supreme Court, In Re K.M.H., where the court enforced a written agreement statute against a sperm provider despite his equal protection and due process challenges. [source] Geologic sources and geographic distribution of sand tempers in prehistoric potsherds from the Mariana IslandsGEOARCHAEOLOGY: AN INTERNATIONAL JOURNAL, Issue 8 2001William R. Dickinson Temper sands in prehistoric potsherds of the Mariana Islands include terrigenous detritus derived from Paleogene volcanic bedrock and calcareous grains derived chiefly from modern fringing reefs, but also in part from uplifted Neogene limestones overlying volcanic bedrock. Calcareous sands are nondiagnostic of island of origin, but volcanic sands and the terrigenous component of hybrid sands composed of mixed terrigenous and calcareous grain types can be traced to geologic sources on Saipan and Guam, the only occupied islands where volcanic bedrock is extensively exposed. Quartzose tempers of several types were derived exclusively from dacitic volcanic rocks on Saipan. Nonquartzose tempers of andesitic parentage derive from both Saipan and Guam, but abundance of orthopyroxene as well as clinopyroxene is diagnostic of Saipan andesitic tempers, the presence of olivine is diagnostic of selected tempers from Guam, and placer temper sands rich in heavy ferromagnesian minerals occur only in sherds on Guam. Temper analysis documents widespread ceramic transfer from Saipan to other islands throughout Mariana prehistory, and more restricted ceramic transfer from Guam to nearby Rota, although the origin of some andesitic temper types is petrographically indeterminate. © 2001 John Wiley & Sons, Inc. [source] Parentage analysis in Gabonese colonies of soil-feeding termites belonging to the Cubitermes sp. affinis subarquatus complex of species (Termitidae: Termitinae)INSECT SCIENCE, Issue 2 2010Virginie Roy Abstract,Cubitermes spp. are widely distributed soil-feeding termite species in sub-Saharan Africa which play a fundamental role in soil structure and fertility. A complex of at least four cryptic species (i.e., Cubitermes sp. affinis subarquatus complex of species) has been recently described using molecular markers. In order to investigate the breeding system of these species, five microsatellite markers were used to carry out parentage and relatedness analyses in 15 Gabonese colonies. Monogamy was confirmed as the predominant reproductive organization in Cubitermes spp. (76% of the colonies). Within 30% of these monogamous colonies, a high relatedness between reproductives was shown, suggesting that mating between related individuals occurs. However, Cubitermes colonies can deviate from monogamy. Indeed, parental contributions by at least two related reproductives of the same sex were revealed in four colonies and polyandry was demonstrated in two of them. Infiltration of reproductives in the colony is the most plausible explanation for such cases of polygamy in Cubitermes spp. [source] Parentage of low-grade metasediments in the Sanbagawa belt, eastern Shikoku, Southwest Japan, and its geotectonic implicationsISLAND ARC, Issue 3 2010Kazuo KiminamiArticle first published online: 19 AUG 2010 Abstract This study examines the geology of low-grade (chlorite zone) metamorphic rocks in the Sanbagawa belt and of a Jurassic accretionary complex in the Northern Chichibu belt, eastern Shikoku, Japan. The bulk chemistries of metasandstones and metapelites in the Sanbagawa belt of eastern Shikoku are examined in order to determine their parentage. The Sanbagawa belt can be divided into northern and southern parts based on lithology and geologic structure. Geochemical data indicate that metasediments in the northern and southern parts are the metamorphic equivalents of the KS-II (Coniacian,Campanian) and KS-I (late Albian,early Coniacian) units of the Shimanto belt, respectively. The depositional ages of the parent sediments of low-grade metamorphic rocks found in the Sanbagawa belt and the Jurassic Northern Chichibu belt, indicate a north-younging polarity. In contrast, sedimentological evidence indicates younging to the south. These observations suggest that a tectonic event has resulted in a change from a northerly to southerly dip direction for schistosity and bedding in the Sanbagawa and Northern Chichibu belts of eastern Shikoku. The younging polarity observed in the Sanbagawa and Northern Chichibu belts, together with previously reported data on vitrinite reflectance and geological structure, indicate that the Northern Chichibu belt was part of the overburden formerly lying on top of the Sanbagawa low-grade metamorphic rocks. [source] Genetic life history effects on juvenile survival in bluegillJOURNAL OF EVOLUTIONARY BIOLOGY, Issue 2 2007B. D. NEFF Abstract Foraging behaviour under the risk of predation has important consequences on an individual's survivorship and fitness. In bluegill (Lepomis macrochirus), we have recently shown that offspring sired by males of alternative life histories differ in their foraging behaviour. Specifically, offspring sired by ,cuckolder' males take fewer risks during foraging than do offspring sired by ,parental' males. This behavioural difference can have important consequences on the fitness of the two life histories and thus the underlying evolutionary mechanism. Here, we examine the consequences of this behavioural variation on growth rate, condition and survivorship during early development of juveniles. We used split in vitro fertilization to generate maternal half-sibs that differed in sire life history. The resulting 18 455 larvae from 50 families were released into a microcosm with safe and risky foraging areas for approximately 2 months. A total of 262 juveniles (1.4%) survived of which parentage was unambiguously determined using microsatellite genetic markers for 254 (97%). Although we found significant dam effects, there was no difference in apparent growth rate or condition of juveniles sired by males of the two life histories. Of the 25 paired half-sib families, 15 had higher survivorship when sired by a cuckolder male, seven had higher survivorship when sired by a parental male and three had no surviving offspring from either sire. Thus, although growth was similar between the two offspring types, survivorship was not. Combining the differential survivorship estimate with paternity data from natural nests and the frequency of males adopting each life history, we calculated that the cuckolder life history has 1.87 times higher fitness than the parental life history. As such, the life histories likely are not governed by a genetic polymorphism. [source] Early maternal, genetic and environmental components of antioxidant protection, morphology and immunity of yellow-legged gull (Larus michahellis) chicksJOURNAL OF EVOLUTIONARY BIOLOGY, Issue 5 2006D. RUBOLINI Abstract Maternal effects mediated by egg quality are important sources of offspring phenotypic variation and can influence the course of evolutionary processes. Mothers allocate to the eggs diverse antioxidants that protect the embryo from oxidative stress. In the yellow-legged gull (Larus michahellis), yolk antioxidant capacity varied markedly among clutches and declined considerably with egg laying date. Analysis of bioptic yolk samples from clutches that were subsequently partially cross-fostered revealed a positive effect of yolk antioxidant capacity on embryonic development and chick growth, but not on immunity and begging behaviour, while controlling for parentage and common environment effects. Chick plasma antioxidant capacity varied according to rearing environment, after statistically partitioning out maternal influences mediated by egg quality. Thus, the results of this study indicate that egg antioxidants are important mediators of maternal effects also in wild bird populations, especially during the critical early post-hatching phase. [source] Monogamous pair bonds and mate switching in the Western Australian seahorse Hippocampus subelongatusJOURNAL OF EVOLUTIONARY BIOLOGY, Issue 6 2000C. Kvarnemo Apparently monogamous animals often prove, upon genetic inspection, to mate polygamously. Seahorse males provide care in a brood pouch. An earlier genetic study of the Western Australian seahorse demonstrated that males mate with only one female for each particular brood. Here we investigate whether males remain monogamous in sequential pregnancies during a breeding season. In a natural population we tagged males and sampled young from two successive broods of 14 males. Microsatellite analyses of parentage revealed that eight males re-mated with the same female, and six with a new female. Thus, in this first study to document long-term genetic monogamy in a seahorse, we show that switches of mates still occur. Polygynous males moved greater distances between broods, and tended to have longer interbrood intervals, than monogamous males, suggesting substantial costs associated with the breaking of pair bonds which may explain the high degree of social monogamy in this fish genus. [source] Minisequencing-Based Genotyping of Duffy and ABO Blood Groups for Forensic PurposesJOURNAL OF FORENSIC SCIENCES, Issue 2 2006Gianmarco Ferri Ph.D. ABSTRACT: Duffy and ABO blood group genetic polymorphisms were studied by minisequencing analysis of single-nucleotide polymorphisms (SNPs) at nucleotide positions,33, 125, 265, and 298 of the Duffy gene and at nucleotide positions,261, 297, 467, 646, and 703 of the ABO gene. In an Italian population sample, we found four alleles and seven genotypes for the Duffy and six alleles and 16 genotypes for the ABO systems. The lower limit for reproducible results was 200 pg DNA, with a range of up to 10 ng and an optimum at 1 ng. All of the 16 analyzed inclusive paternity tests were also consistent with parentage and two out of four inconsistencies with parentage cases were excluded by one or more SNPs. Although Duffy and ABO SNP typing show lower informativeness than most current forensic tests, their robustness, the limited population distribution of FY*Fy type, and the sensitivity of the minisequencing technology suggest that these markers can be useful in selected forensic applications. [source] Assessment of Genetic Variation Within Indian Mustard (Brassica juncea) Germplasm Using Random Amplified Polymorphic DNA MarkersJOURNAL OF INTEGRATIVE PLANT BIOLOGY, Issue 4 2008Muhammad Ayub Khan Abstract Genetic diversity among 45 Indian mustard (Brassica juncea L.) genotypes comprising 37 germplasm collections, five advance breeding lines and three improved cultivars was investigated at the DNA level using the random amplified polymorphic DNA (RAPD) technique. Fifteen primers used generated a total of 92 RAPD fragments, of which 81 (88%) were polymorphic. Of these, 13 were unique to accession ,Pak85559'. Each primer produced four to nine amplified products with an average of 6.13 bands per primer. Based on pairwise comparisons of RAPD amplification products, Nei and Li's similarity coefficients were calculated to evaluate the relationships among the accessions. Pairwise similarity indices were higher among the oilseed accessions and cultivars showing narrow ranges of 0.77,0.99. An unweighted pair-group method with arithmetic averages cluster analysis based on these genetic similarities placed most of the collections and oilseed cultivars close to each other, showing a low level of polymorphism between the accessions used. However, the clusters formed by oilseed collections and cultivars were comparatively distinct from that of advanced breeding lines. Genetically, all of the accessions were classified into a few major groups and a number of individual accessions. Advanced breeding lines were relatively divergent from the rest of the accessions and formed independent clusters. Clustering of the accessions did not show any pattern of association between the RAPD markers and the collection sites. A low level of genetic variability of oilseed mustard was attributed to the selection for similar traits and horticultural uses. Perhaps close parentage of these accessions further contributed towards their little diversity. The study demonstrated that RAPD is a simple and fast technique to compare the genetic relationship and pattern of variation among the gene pool of this crop. [source] Do marker-based paternity assignments favour heterozygous and unrelated males?MOLECULAR ECOLOGY, Issue 9 2010JINLIANG WANG Abstract Genetic marker-based parentage analyses are widely applied to studies of natural populations in the fields of evolutionary biology, conservation biology and ecology. When the same markers used in a parentage analysis are used together with the inferred parentage in a downstream analysis, such as the analysis of mate choice in terms of heterozygosity or relatedness, a bias may be incurred because a subset of the genotypes are favoured in parentage assignments or non-exclusions. A previous simulation study shows that exclusion-based paternity analyses are biased in favour of heterozygous males, and males less related to the mothers than expected under random mating. In this study, I investigated the biases of genetic paternity analyses achieved by both exclusion- and likelihood-based methods, using both analytical and simulation approaches. It is concluded that while both exclusion- and likelihood-based methods can lead to biased paternity assignments or non-exclusions in favour of a subset of genotypes, the bias is not consistently towards heterozygous males or males apparently less related to mothers. Both the direction and extent of the bias depend heavily on the allele frequency distribution and the number of markers, the methods used for paternity assignments, and the estimators of relatedness. There exist important differences in the patterns of the biases between exclusion- and likelihood-based paternity analysis methods. It is concluded that the markers, except when they are highly informative to yield accurate paternity assignments or exclusions, should be split into two subsets which are used separately in the paternity and downstream analyses. [source] Intergenerational reproductive parasitism in a stingless beeMOLECULAR ECOLOGY, Issue 19 2009BENJAMIN P. OLDROYD Insect colonies have been traditionally regarded as closed societies comprised of completely sterile workers ruled over by a single once-mated queen. However, over the past 15 years, microsatellite studies of parentage have revealed that this perception is far from the truth (Beekman & Oldroyd 2008). First, we learned that honey bee queens are far more promiscuous than we had previously imagined (Estoup et al. 1994), with one Apis dorsata queen clocked at over 100 mates (Wattanachaiyingcharoen et al. 2003). Then Oldroyd et al. (1994) reported a honey bee colony from Queensland, where virtually all the males were sons of a single patriline of workers , a clear case of a cheater mutant that promoted intra-colonial reproductive parasitism. Then we learned that both bumble bee colonies (Lopez-Vaamonde et al. 2004) and queenless honey bee colonies (Nanork et al. 2005, 2007) are routinely parasitized by workers from other nests that fly in and lay male-producing eggs that are then reared by the victim colony. There is even evidence that in a thelytokous honey bee population, workers lay female-destined eggs directly into queen cells, thus reincarnating themselves as a queen (Jordan et al. 2008). And let us not forget ants, where microsatellite studies have revealed equally bizarre and totally unexpected phenomena (e.g. Cahan & Keller 2003; Pearcy et al. 2004; Fournier et al. 2005). Now, in this issue, Alves et al. (2009) use microsatellites to provide yet another shocking and completely unexpected revelation about the nefarious goings-on in insect colonies: intergenerational reproductive parasitism by stingless bee workers. [source] Patterns of relatedness and parentage in an asocial, polyandrous striped hyena populationMOLECULAR ECOLOGY, Issue 20 2007AARON P. WAGNER Abstract We investigated patterns of relatedness and reproduction in a population of striped hyenas in which individuals are behaviourally solitary but form polyandrous spatial groups consisting of one adult female and multiple adult males. Group-mate males were often close relatives, but were unrelated or distantly related in some cases, indicating that male coalitions are not strictly a result of philopatry or dispersal with cohorts of relatives. Most male,female pairs within spatial groups were unrelated or only distantly related. Considering patterns of relatedness between groups, relatedness was significantly higher among adult males living in non-neighbouring ranges than among neighbouring males. Mean relatedness among male,female dyads was highest for group-mates, but relatedness among non-neighbouring males and females was also significantly higher than among dyads of opposite-sex neighbours. Female,female relatedness also increased significantly with increasing geographic separation. These unusual and unexpected patterns may reflect selection to settle in a nonadjacent manner to reduce inbreeding and/or competition among relatives for resources (both sexes), or mates (males). Finally, resident males fathered the majority of the resident female's cubs, but extra-group paternity was likely in 31% of the cases examined, and multiple paternity was likely in half of the sampled litters. [source] Genetic monogamy despite social promiscuity in the pot-bellied seahorse (Hippocampus abdominalis)MOLECULAR ECOLOGY, Issue 11 2007A. B. WILSON Abstract Sexual selection theory predicts a positive correlation between relative parental investment and mate choice. In syngnathid fishes (seahorses and pipefish), males brood offspring in specialized brooding structures. While female-female mating competition has been demonstrated in some pipefishes, all seahorses (genus Hippocampus) studied to date have been found to have conventional sex roles with greater male,male competition for access to mates despite possessing the most complex brood structures in the family. Although multiple mating is common in pipefish, seahorses are again exceptional, exhibiting strict genetic monogamy. Both demographic and behavioural explanations have been offered to explain the lack of multiple mating in seahorse species, but these hypotheses have not yet been explicitly addressed. We investigated mating systems and brood parentage of the pot-bellied seahorse, Hippocampus abdominalis, a temperate-water species that is socially promiscuous with conventional sex roles in laboratory populations. We observed promiscuous courtship behaviour and sex-role reversal in high density, female-biased field populations of H. abdominalis. We hypothesize that sex roles are plastic in H. abdominalis, depending on local population density and sex ratio. Despite promiscuous courtship behaviour, all assayed male seahorses were genetically monogamous in both laboratory and wild populations. Physiological limitations associated with embryo incubation may explain the absence of multiple mating in seahorses and may have played an important role in the development of the unique reproductive behaviour typical in these species. [source] Effective gene dispersal and female reproductive success in Mediterranean maritime pine (Pinus pinaster Aiton)MOLECULAR ECOLOGY, Issue 14 2006SANTIAGO C. GONZÁLEZ-MARTÍNEZ Abstract Understanding population-scale processes that affect allele frequency changes across generations is a long-standing interest in genetic, ecological and evolutionary research. In particular, individual differences in female reproductive success and the spatial scale of gene flow considerably affect evolutionary change and patterns of local selection. In this study, a recently developed maximum-likelihood (ML) method based on established offspring, the Seedling Neighbourhood Model, was applied and exponentially shaped dispersal kernels were fitted to both genetic and ecological data in a widespread Mediterranean pine, Pinus pinaster Aiton. The distribution of female reproductive success in P. pinaster was very skewed (about 10% of trees mothered 50% of offspring) and significant positive female selection gradients for diameter (, = 0.7293) and cone crop (, = 0.4524) were found. The selective advantage of offspring mothered by bigger trees could be due to better-quality seeds. These seeds may show more resilience to severe summer droughts and microsite variation related to water and nutrient availability. Both approaches, ecological and of parentage, consistently showed a long-distance dispersal component in saplings that was not found in dispersal kernels based on seed shadows, highlighting the importance of Janzen-Connell effects and microenvironmental variation for survival at early stages of establishment in this Mediterranean key forest tree. [source] Philopatry and reproductive success in Bornean orang-utans (Pongo pygmaeus)MOLECULAR ECOLOGY, Issue 9 2006B. GOOSSENS Abstract Behavioural observations suggest that orang-utans are semi-solitary animals with females being philopatric and males roaming more widely in search of receptive partners, leading to the prediction that females are more closely related than males at any given site. In contrast, our study presents evidence for male and female philopatry in the orang-utan. We examined patterns of relatedness and parentage in a wild orang-utan population in Borneo using noninvasively collected DNA samples from animals observed to defecate, and microsatellite markers to assess dispersal and mating strategies. Surprisingly, resident females were equally as related to other resident females (mean rxy = 0.303) as resident males were to other resident males (mean rxy = 0.305). Moreover, resident females were more related to each other and to the resident males than they were to nonresident females, and resident males were more related to each other (and resident females) than they were to nonresident males. We assigned genetic mothers to 12 individuals in the population, while sires could be identified for eight. Both flanged males and unflanged males achieved paternity, similar to findings reported for Sumatran orang-utans. [source] Mating system, philopatry and patterns of kinship in the cooperatively breeding subdesert mesite Monias benschiMOLECULAR ECOLOGY, Issue 11 2005N. SEDDON Abstract In the first molecular study of a member of the threatened avian family, Mesitornithidae, we used nine polymorphic microsatellite loci to elucidate parentage, patterns of within-group kinship and occurrence of extra-group paternity in the subdesert mesite Monias benschi, of southwest Madagascar. We found this cooperatively breeding species to have a very fluid mating system. There was evidence of genetic monogamy and polygynandry: of the nine groups with multiple offspring, six contained one breeding pair with unrelated helpers and three contained multiple male and female breeders with related helpers. Although patterns of within-group kinship varied, there was a strong positive relationship between group size and relatedness, suggesting that groups form by natal philopatry. There was also a strong positive correlation between within-sex and between-sex relatedness, indicating that unlike most cooperatively breeding birds, philopatry involved both sexes. In contrast to predictions of kin selection and reproductive skew models, all monogamous groups contained unrelated individuals, while two of the three polygynandrous groups were families. Moreover, although between-group variation in seasonal reproductive success was related to within-group female relatedness, relatedness among males and between the sexes had no bearing on a group's reproductive output. While kin selection may underlie helping behaviour in females, factors such as direct long-term fitness benefits of group living probably determine helping in males. Of the 14 offspring produced by fully sampled groups, at least two were sired by males from neighbouring groups: one by a breeding male and one by a nonbreeding male, suggesting that males may augment their reproductive success through extra-group paternity. [source] A genetic assessment of parentage in a natural population of dollar sunfish (Lepomis marginatus) based on microsatellite markersMOLECULAR ECOLOGY, Issue 9 2002M. MacKiewicz Abstract We employ microsatellite markers to assess mating tactics in Lepomis marginatus. Genetic assignments for 1015 progeny in 23 nests indicate that about 95% of the offspring were sired by their respective nest-guardians, a finding consistent with the apparent absence of a brood parasitic morphotype in this species. Allopaternal care was documented in two nests, one resulting from a nest takeover, the other from cuckoldry by an adjoining nest-tender. Clustered de novo mutations also were identified. About 2.5 females (range 1,7) contributed to the offspring pool within a typical nest. Results are compared to those for other Lepomis species. [source] Spawning success in Atlantic salmon (Salmo salar L.): a long-term DNA profiling-based study conducted in a natural streamMOLECULAR ECOLOGY, Issue 4 2001J. B. Taggart Abstract Spawning success of Atlantic salmon (Salmo salar L.) was investigated, under near-natural conditions, in the Girnock Burn, an 8-km long tributary of the River Dee in Scotland. Employing minisatellite-based DNA profiling, mating outcomes were resolved over three spawning seasons by assigning parentage to progeny samples removed from spawning nests (,redds'). While individual spawning patterns differed markedly, consistent trends were present over the 3 years studied. Multiple spawning was found to be prevalent. More than 50% of anadromous spawners of both sexes contributed to more than one redd. Up to six redds for a single female and seven for a single male were detected. Both sexes ranged extensively. Distance between redds involving the same parent varied from a few metres to > 5 km. Distances > 1 km were common. Both males and females ranged to a similar extent. Range limit was not correlated to fish size. Pairs were not monogamous, both males and females mating with different partners at different sites. Size assortative mating was apparent among 1991 spawners but was not detected for 1992 or 1995. Redd superimposition was found to be common (17,22% of redds over the 3 years), although it was not correlated to the number of anadromous spawners present. High levels of nonanadromous mature parr mating success (40,50% of total progeny sampled) were recorded, and these likely contribute greatly to the effective population size. The relevance of these findings at the individual and population level is discussed, with particular reference to management implications. [source] Molecular ecology of social behaviour: analyses of breeding systems and genetic structureMOLECULAR ECOLOGY, Issue 2 2001Kenneth G. Ross Abstract Molecular genetic studies of group kin composition and local genetic structure in social organisms are becoming increasingly common. A conceptual and mathematical framework that links attributes of the breeding system to group composition and genetic structure is presented here, and recent empirical studies are reviewed in the context of this framework. Breeding system properties, including the number of breeders in a social group, their genetic relatedness, and skew in their parentage, determine group composition and the distribution of genetic variation within and between social units. This group genetic structure in turn influences the opportunities for conflict and cooperation to evolve within groups and for selection to occur among groups or clusters of groups. Thus, molecular studies of social groups provide the starting point for analyses of the selective forces involved in social evolution, as well as for analyses of other fundamental evolutionary problems related to sex allocation, reproductive skew, life history evolution, and the nature of selection in hierarchically structured populations. The framework presented here provides a standard system for interpreting and integrating genetic and natural history data from social organisms for application to a broad range of evolutionary questions. [source] Statistical confidence in parentage analysis with incomplete sampling: how many loci and offspring are needed?MOLECULAR ECOLOGY, Issue 5 2000B. D. Neff Abstract We have recently presented models to estimate parentage in breeding systems with multiple mating and incomplete sampling of the candidate parents. Here we provide formulas to calculate the statistical confidence and the optimal trade-off between the number of loci and offspring. These calculations allow an understanding of the statistical significance of the parentage estimates as well as the appropriate sampling regime required to obtain a desired level of confidence. We show that the trade-off generally depends on the parentage of the putative parents. When parentage is low, sampling effort should concentrate on increasing the number of loci. Otherwise, there are similar benefits from increasing the number of loci or offspring. We demonstrate these methods using genetic data from a nest of the bluegill sunfish (Lepomis macrochirus). [source] Microsatellite markers characterized in the barn owl (Tyto alba) and of high utility in other owls (Strigiformes: AVES)MOLECULAR ECOLOGY RESOURCES, Issue 6 2009ÁKOS KLEIN Abstract We have identified 15 polymorphic microsatellite loci for the barn owl (Tyto alba), five from testing published owl loci and 10 from testing non-owl loci, including loci known to be of high utility in passerines and shorebirds. All 15 loci were sequenced in barn owl, and new primer sets were designed for eight loci. The 15 polymorphic loci displayed two to 26 alleles in 56,58 barn owls. When tested in 10 other owl species (n = 1,6 individuals), between four and nine loci were polymorphic per species. These loci are suitable for studies of population structure and parentage in owls. [source] Twenty-one novel microsatellite DNA loci isolated from the Puget Sound white-crowned sparrow, Zonotrichia leucophrys pugetensisMOLECULAR ECOLOGY RESOURCES, Issue 3 2009ANGELIKA POESEL Abstract The white-crowned sparrow, Zonotrichia leucophrys, has served as a model species for studies of song and reproductive physiology. Here, we describe primers for 21 novel microsatellite loci isolated from the Puget Sound subspecies, Zonotrichia leucophrys pugetensis, which will be useful for parentage and population genetic analyses. Based on genotypes from seven to 22 adult birds from one population, the average number of alleles per locus was 10.9 (four to 21 alleles) and observed heterozygosity varied from 0.50 to 1.00. All loci also amplified products in at least one of three other passerine species tested. [source] Isolation and characterization of polymorphic microsatellite loci from Octodon degusMOLECULAR ECOLOGY RESOURCES, Issue 3 2009Y. F. QUAN Abstract Quantifying genetic kinship and parentage is critical to understanding the adaptive consequences of sociality. To measure fitness in a species with variable group structure, we isolated 14 microsatellite loci from Octodon degus, a semi-fossorial rodent endemic to Chile. The number of alleles per locus ranged from four to 14. Thirteen loci were in Hardy,Weinberg proportions, with values of observed heterozygosity ranging from 0.550 to 0.950. These markers provide the basis for future studies of the direct fitness consequences of sociality in O. degus. [source] Transferability and characterization of nine microsatellite markers for the tropical tree species Tabebuia roseo-albaMOLECULAR ECOLOGY RESOURCES, Issue 1 2009JULIANA MASSIMINO FERES Abstract Microsatellite loci that were previously developed in the tropical tree Tabebuia aurea were used for the genetic analysis of Tabebuia roseo-alba populations. Nine of 10 simple sequence repeat markers were amplified, and the polymorphism was assessed in 58 individuals sampled from two stands in southeastern Brazil. All loci were polymorphic with Mendelian inheritance. The allele numbers were high, ranging from 5 to 13 in population I and 3 to 7 in population II, with means of 8.9 and 5.5, respectively. We conclude that these markers can be efficiently used for parentage and gene-flow studies. [source] | |||||||||||||||||||||||||