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Parameter Choice (parameter + choice)
Selected AbstractsA Review of Arthropod Phylogeny: New Data Based on Ribosomal DNA Sequences and Direct Character OptimizationCLADISTICS, Issue 2 2000Gonzalo Giribet Ribosomal gene sequence data are used to explore phylogenetic relationships among higher arthropod groups. Sequences of 139 taxa (23 outgroup and 116 ingroup taxa) representing all extant arthropod "classes" except Remipedia and Cephalocarida are analyzed using direct character optimization exploring six parameter sets. Parameter choice appears to be crucial to phylogenetic inference. The high level of sequence heterogeneity in the 18S rRNA gene (sequence length from 1350 to 2700 bp) makes placement of certain taxa with "unusual" sequences difficult and underscores the necessity of combining ribosomal gene data with other sources of information. Monophyly of Pycnogonida, Chelicerata, Chilopoda, Chilognatha, Malacostraca, Branchiopoda (excluding Daphnia), and Ectognatha are among the higher groups that are supported in most of the analyses. The positions of the Pauropoda, Symphyla, Protura, Collembola, Diplura, Onychophora, Tardigrada, and Daphnia are unstable throughout the parameter space examined. [source] Analysis of parameter sensitivity and experimental design for a class of nonlinear partial differential equationsINTERNATIONAL JOURNAL FOR NUMERICAL METHODS IN FLUIDS, Issue 6 2005Michael L. Anderson Abstract The purpose of this work is to analyse the parameter sensitivity problem for a class of nonlinear elliptic partial differential equations, and to show how numerical simulations can help to optimize experiments for the estimation of parameters in such equations. As a representative example we consider the Laplace,Young problem describing the free surface between two fluids in contact with the walls of a bounded domain, with the parameters being those associated with surface tension and contact. We investigate the sensitivity of the solution and associated functionals to the parameters, examining in particular under what conditions the solution is sensitive to parameter choice. From this, the important practical question of how to optimally design experiments is discussed; i.e. how to choose the shape of the domain and the type of measurements to be performed, such that a subsequent inversion of the measured data for the model parameters yields maximal accuracy in the parameters. We investigate this through numerical studies of the behaviour of the eigenvalues of the sensitivity matrix and their relation to experimental design. These studies show that the accuracy with which parameters can be identified from given measurements can be improved significantly by numerical experiments. Copyright © 2005 John Wiley & Sons, Ltd. [source] Phylogeny and Systematic Position of Opiliones: A Combined Analysis of Chelicerate Relationships Using Morphological and Molecular Data,CLADISTICS, Issue 1 2002Gonzalo Giribet The ordinal level phylogeny of the Arachnida and the suprafamilial level phylogeny of the Opiliones were studied on the basis of a combined analysis of 253 morphological characters, the complete sequence of the 18S rRNA gene, and the D3 region of the 28S rRNA gene. Molecular data were collected for 63 terminal taxa. Morphological data were collected for 35 exemplar taxa of Opiliones, but groundplans were applied to some of the remaining chelicerate groups. Six extinct terminals, including Paleozoic scorpions, are scored for morphological characters. The data were analyzed using strict parsimony for the morphological data matrix and via direct optimization for the molecular and combined data matrices. A sensitivity analysis of 15 parameter sets was undertaken, and character congruence was used as the optimality criterion to choose among competing hypotheses. The results obtained are unstable for the high-level chelicerate relationships (except for Tetrapulmonata, Pedipalpi, and Camarostomata), and the sister group of the Opiliones is not clearly established, although the monophyly of Dromopoda is supported under many parameter sets. However, the internal phylogeny of the Opiliones is robust to parameter choice and allows the discarding of previous hypotheses of opilionid phylogeny such as the "Cyphopalpatores" or "Palpatores." The topology obtained is congruent with the previous hypothesis of "Palpatores" paraphyly as follows: (Cyphophthalmi (Eupnoi (Dyspnoi + Laniatores))). Resolution within the Eupnoi, Dyspnoi, and Laniatores (the latter two united as Dyspnolaniatores nov.) is also stable to the superfamily level, permitting a new classification system for the Opiliones. [source] 2-Dimensional code design for an optical CDMA system with a parallel interference cancellation receiverEUROPEAN TRANSACTIONS ON TELECOMMUNICATIONS, Issue 7 2007Mikaël Morelle The objective of this paper is to design a two-Dimensional Optical Code Division Multiple Access system (2D-OCDMA) for application in access networks, with coding and decoding functions performed by electronic devices. We present a new construction method of Multi-Wavelength Optical Orthogonal Codes (MWOOC), which permits a high flexibility in the code parameters choice. This work evaluates in the noiseless case, the MWOOC potentialities for two receiver structures: a Conventional Correlation Receiver (CCR) and a Parallel Interference Cancellation receiver (PIC). We show that with a PIC receiver, it is possible to design two-Dimensional codes that respect the access specifications. Copyright © 2007 John Wiley & Sons, Ltd. [source] |