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Observed Migration (observed + migration)

Distribution by Scientific Domains

Earth and Environmental Science	50%

Selected Abstracts

Halotaxis of cyanobacteria in an intertidal hypersaline microbial mat

ENVIRONMENTAL MICROBIOLOGY, Issue 3 2010
Katharina Kohls
Summary An intertidal hypersaline cyanobacterial mat from Abu Dhabi (United Arab Emirates) exhibited a reversible change in its surface colour within several hours upon changes in salinity of the overlying water. The mat surface was orange-reddish at salinities above 15% and turned dark green at lower salinities. We investigated this phenomenon using a polyphasic approach that included denaturing gradient gel electrophoresis, microscopy, high-performance liquid chromatography, hyperspectral imaging, absorption spectroscopy, oxygen microsensor measurements and modelling of salinity dynamics. Filaments of Microcoleus chthonoplastes, identified based on 16S rRNA sequencing and morphology, were found to migrate up and down when salinity was decreased below or increased above 15%, respectively, causing the colour change of the mat uppermost layer. Migration occurred in light and in the dark, and could be induced by different salts, not only NaCl. The influence of salinity-dependent and independent physico-chemical parameters, such as water activity, oxygen solubility, H2S, gravity and light, was excluded, indicating that the observed migration was due to a direct response to salt stress. We propose to term this salinity-driven cyanobacterial migration as ,halotaxis', a process that might play a vital role in the survival of cyanobacteria in environments exposed to continuous salinity fluctuations such as intertidal flats. [source]

Pressure plate studies to determine how moisture affects access of bacterial-feeding nematodes to food in soil

EUROPEAN JOURNAL OF SOIL SCIENCE, Issue 3 2002
G.W. Yeates
Summary Nematode activity in the soil depends on the presence of free water. We conducted pressure plate experiments to understand better how soil matric potential and structural degradation affect the population growth of three bacterial-feeding nematodes (Cephalobus, Pristionchus, Rhabditis). We took undisturbed cores from six soils (sand, silt loam and silty clay loam with four management regimes), and removed all fauna from them. Ten or 30 nematodes were added, and pressures corresponding to soil matric potentials of ,10, ,33, ,50, ,100 or ,1500 kPa were applied for 35 days. The nematodes were then counted. Significant reproduction of all bacterial-feeding nematodes occurred when the diameters of water-filled pores were approximately 1 ,m. This confirms observations using repacked soils and field manipulations. Only for Pristionchus did declining populations match the reduction in total soil porosity related to intensification of land use on the silty clay loam. We had not expected Cephalobus to have the fastest increase in population of the three nematodes in intact soil cores, and our evidence questions the relative importance given to the three nematode families in soil processes. The differing rates of population increase of the three nematodes in the various soils reflect both habitable pore space and trophic interactions. This suggests that the very diversity of nematode assemblages is crucial in the resilience of biological soil processes. That water-filled pores as small as 1 ,m provide suitable spaces for sizeable populations of bacterial-feeding nematodes accords with the observed migration of infective juveniles of trichostrongylid nematodes and mermithids in water films on herbage. Our results imply that assessment of the role of nematodes in soil processes may be a key to the understanding of biological interactions in water films, and the selection pressures on nematode morphology. [source]

Movement and behaviour of large southern bluefin tuna (Thunnus maccoyii) in the Australian region determined using pop-up satellite archival tags

FISHERIES OCEANOGRAPHY, Issue 5 2008
TOBY A. PATTERSON
Abstract Pop-up satellite archival tags (PSATs) were deployed on 52 large (156,200 cm length to caudal fork) southern bluefin tuna (Thunnus maccoyii) in the western Tasman Sea during the austral winters of 2001,2005. Southern bluefin tuna (SBT) were resident in the Tasman Sea for up to 6 months with movements away from the tagging area occurring at highly variable rates. The data indicated a general tendency for SBT to move south from the tagging area in the Western Tasman Sea. Four individuals migrated west along the southern continental margin of Australia and into the Indian Ocean. Three individuals moved east into the central Tasman Sea, with one individual reaching New Zealand. We also describe the first observed migration of an SBT from the Tasman Sea to the Indian Ocean spawning grounds south of Indonesia. Individuals spent most of their time relatively close to the Australian coast, with an estimated 84% of time spent in the Australian Fishing Zone. SBT favored temperatures between 19 and 21°C, adjusting their depth to the vertical temperature distribution. Distinct diurnal diving patterns were observed and adjustment of depth to maintain constant ambient light levels over a 24-h period. The findings of this study are a significant advance toward greater understanding of the spatial dynamics of large SBT and understanding the connectivity between distant regions of their distribution. [source]

Biologic predictors of extension of oligoarticular juvenile idiopathic arthritis as determined from synovial fluid cellular composition and gene expression

ARTHRITIS & RHEUMATISM, Issue 3 2010
Patricia J. Hunter
Objective To identify biomarkers in the first synovial fluid (SF) aspirate obtained from children with oligoarticular juvenile idiopathic arthritis (JIA), which could be used to identify children whose disease is likely to extend to a more severe phenotype. Methods Patients with recent-onset oligoarticular JIA were identified and grouped according to those whose mild disease persisted (persistent disease) or those whose disease would extend from a mild to more severe phenotype (extended-to-be disease) at 1 year after diagnosis. Flow cytometry was used to delineate differences in the mononuclear cell populations between the first blood sample and first SF aspirate from the same patient and between outcome (persistent versus extended-to-be) groups. Proportions of lymphocytes in the joint were modeled on chemotaxis of lymphocytes to CCL5, using Transwell migration assays. Levels of CCL5 in the SF were quantified by enzyme-linked immunosorbent assay. RNA profiles of SF mononuclear cells were compared between groups using the Affymetrix GeneChip hybridization protocol and hierarchical clustering analyses. Results Compared with peripheral blood mononuclear cells, SF mononuclear cells displayed an expansion of CD8+ T cells, reduced proportion of B cells, and expansion of CD16, natural killer cells. The lower CD4:CD8 ratio in the SF was recapitulated in vitro by the observed migration of blood T cells in response to CCL5. Synovial CCL5 levels were higher in children whose disease extended to a more severe phenotype. The CD4:CD8 ratio in the SF was significantly lower in patients with extended-to-be oligoarticular JIA (0.57 compared with 0.90 in the persistent disease group, difference 0.33, 95% confidence interval 0.04,0.62; P = 0.009). Gene expression profiling revealed that 344 genes were >1.5-fold differentially expressed between outcome groups (P < 0.05), and these included genes associated with inflammation and macrophage differentiation, which showed increased levels in patients with extended disease at 1 year, and genes associated with immune regulation, which showed increased levels in patients with persistent disease at 1 year. Conclusion Analyses of the proportions of synovial lymphocytes, levels of CCL5, and differential gene expression yielded potential biomarkers with which to predict the likelihood of extension of oligoarticular JIA to a more severe disease phenotype. [source]