Home About us Contact
|
Home About us Contact | ||
|
|
||
Oxysporum
Kinds of Oxysporum Selected AbstractsVolatile organic compounds: a potential direct long-distance mechanism for antagonistic action of Fusarium oxysporum strain MSA 35ENVIRONMENTAL MICROBIOLOGY, Issue 4 2009Daniela Minerdi Summary Fusarium oxysporum MSA 35 [wild-type (WT) strain] is an antagonistic Fusarium that lives in association with a consortium of bacteria belonging to the genera Serratia, Achromobacter, Bacillus and Stenotrophomonas in an Italian soil suppressive to Fusarium wilt. Typing experiments and virulence tests provided evidence that the F. oxysporum isolate when cured of the bacterial symbionts [the cured (CU) form], is pathogenic, causing wilt symptoms identical to those caused by F. oxysporum f. sp. lactucae. Here, we demonstrate that small volatile organic compounds (VOCs) emitted from the WT strain negatively influence the mycelial growth of different formae speciales of F. oxysporum. Furthermore, these VOCs repress gene expression of two putative virulence genes in F. oxysporum lactucae strain Fuslat10, a fungus against which the WT strain MSA 35 has antagonistic activity. The VOC profile of the WT and CU fungus shows different compositions. Sesquiterpenes, mainly caryophyllene, were present in the headspace only of WT MSA 35. No sesquiterpenes were found in the volatiles of ectosymbiotic Serratia sp. strain DM1 and Achromobacter sp. strain MM1. Bacterial volatiles had no effects on the growth of the different ff. spp. of F. oxysporum examined. Hyphae grown with VOC from WT F. oxysporum f. sp. lactucae strain MSA 35 were hydrophobic whereas those grown without VOCs were not, suggesting a correlation between the presence of volatiles in the atmosphere and the phenotype of the mycelium. This is the first report of VOC production by antagonistic F. oxysporum MSA 35 and their effects on pathogenic F. oxysporum. The results obtained in this work led us to propose a new potential direct long-distance mechanism for antagonism by F. oxysporum MSA 35 mediated by VOCs. Antagonism could be the consequence of both reduction of pathogen mycelial growth and inhibition of pathogen virulence gene expression. [source] Diagnosis and detection of host-specific forms of Fusarium oxysporum,EPPO BULLETIN, Issue 3-4 2000R. P. Baayen Diagnosis and detection of host-specific forms of Fusarium oxysporum are traditionally based on the combination of diagnostic symptoms on the host with the presence of the fungus in the affected tissues. The classical approach is becoming increasingly problematic because more than one forma specialis may occur on a given host, along with non-pathogenic strains which are common soil and rhizosphere inhabitants. Neither formae speciales nor pathogenic races within formae speciales can be distinguished morphologically. Although united by joint pathogenicity to a given host, strains belonging to the same forma specialis need not be phylogenetically related. Development of diagnostics for host-specific groups in F. oxysporum requires monophyletic target groups. Recent studies on gene-genealogy and AFLP-based phylogenies show that the majority of formae speciales in F. oxysporum are polyphyletic (unnatural) and do not offer any prospects for the development of molecular diagnostics. In contrast, highly specific PCR primers have been developed for formae speciales (or races) that consist of a single clonal lineage, and for monophyletic groups of lineages within a forma specialis. Among others, specific PCR primers have thus been developed for F. oxysporum f. sp. basilici, specific races in F. oxysporum ff. spp. dianthi and gladioli, and for the EPPO A2 (EU II/A1) quarantine fungus F. oxysporum f. sp. albedinis which can reliably replace conventional isolation and pathogenicity testing procedures. [source] Genetic variation among Fusarium oxysporum isolates from cucumberEPPO BULLETIN, Issue 2 2000D. J. Vakalounakis Isolates of Fusarium oxysporum obtained from cucumber worldwide were classified into 3 groups by random amplified polymorphic DNA-polymerase chain reaction (RAPD-PCR). All isolates of f. sp. radicis-cucumerinum fall into one group. Isolates of races 1 and 2 of f. sp. cucumerinum fall into a second group related to isolates of f. sp. melonis and niveum. Isolates of race 3 fall into a third group, related to f. sp. momordicae. Because f. sp. radicis-cucumerinum has relatively recently been introduced into Greece, where it is actively spreading and very damaging, RAPD-PCR may be valuable in monitoring populations of F. oxysporum. [source] Leaf fungi of two wild plants in Assiut, EgyptFEDDES REPERTORIUM, Issue 7-8 2004S. K. Hemida Leaves of two wild species of the flora of Egypt: Calotropis procera (Ait.) Ait., Asclepiadaceae and Chrozophora plicata (Vahl) A.Juss. ex Spreng., Euphorbiaceae have been studied morphologically and mycologically, in addtion to air borne fungi. Fifty five species and two varieties belonging to 26 genera of phyllosphere and phylloplane fungi were isolated from both plant species on glucose- and cellulose-agar media. Mycological analysis was done monthly over six months (July to December, 2003). Alternariaalternata, Aspergillus fumigatus, A. flavus and A. niger were the basic fungal species found on leaf surfaces. Phylloplane of C. plicata caught specifically Chaetomiumglobosum, C.,spirale, Cochliobolus lunatus, Drechslera halodes, Fusarium incarnatum, F. oxysporum, Memnoniella echinata and Papulaspora sepedonioides. The total counts of phyllosphere fungi of C.,plicata were nearly twice as much as those of C.,procera regardless medium's type. Forty species and one variety belonging to 22 genera of air borne fungi were recovered all over the experimental period (six months). Alternaria, Aspergillus, Cladosporium and Penicillium were the most frequently isolated species. The presented results revealed that, leaf shape and density (hair density and type) may be the most important factors of the biodiversity of the fungal species on the studied taxa. (© 2004 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim) Die Blätter zweier Wildarten aus der Flora Ägyptens: Calotropis procera (Ait.) Ait., Asclepiadeceae, und Chrozophora plicata(Vahl) A.Juss. ex Spreng., Euphorbiaceae, wurden in Bezug auf ihre Morphologie und Mykologie untersucht sowie zusätzlich auf ihre "luftgeborenen" Pilze. Auf beiden Arten wurden auf einem Glukose- bzw. Cellulose-Medium insgesamt 55 Arten und zwei Varietäten aus 26 Gattungen phyllosphärer und phylloplaner Pilze nachgewiesen. Die mykologischen Analysen wurden über einen Zeitraum von sechs Monaten (Juli bis Dezember 2003) durchgeführt. Alternariaalternata, Aspergillus fumigatus, A. flavus und A. niger waren die Basis-Pilzarten, die auf den Blattoberflächen ermittelt wurden. Auf C. plicata waren Chaetomiumglobosum, C. spirale, Cochliobolus lunatus, Drechslera halodes, Fusarium incarnatum, F. oxysporum, Memnoniella echinata und Papulaspora sepedonioides die häufigsten phylloplanen Arten. Ungeachtet des Mediumtyps war die Anzahl phyllosphärischer Pilze auf C. plicata etwa zweimal so hoch wie auf C. procera. Über die gesamte Versuchszeit von sechs Monaten wurden 40 Arten und eine Varietät aus 22 Gattungen "luftgeborener" Pilze beobachtet. Mit Alternaria, Aspergillus, Cladosporium und Penicillium fanden sich die am häufigsten isolierten Arten. Aus den erzielten Ergebnissen kann man ableiten, dass Blattform und Haare (Dichte und Typ) die wichtigsten Faktoren für die Biodiversität der untersuchten Pilzarten sind. [source] Composition and antifungal activity of essential oils isolated from Hypericum hyssopifolium and Hypericum heterophyllumFLAVOUR AND FRAGRANCE JOURNAL, Issue 1 2004A. Cakir Abstract The composition of the hydrodistilled essential oils obtained from the aerial parts of Hypericum hyssopifolium subsp. elongatum var. elongatum and H. heterophyllum Vent. were analysed by means of GC and GC,MS, and 66 compounds were determined in total. The oils showed remarkable differences in chemical composition. The oil of H. hyssopifolium, which is rich in monoterpenes, consists primarily of , -pinene (57.3%), , -pinene (9.0%), limonene (6.2%) and , -phellandrene (4.4%). The oil of H. heterophyllum was a complex mixture consisting mainly of sesquiterpenes (72.9% of the total oil). In this oil, isocaryophyllene (17.1%), , -pinene (11.6%), , -cadinene (9.5%), , -muurolene (8.2%), n -decane (5.8%), , -cadinene (5.5%) and , -caryophyllene (4.5%) were found to be major constituents. The two essential oils were tested for antifungal activity using microbial growth inhibition assays in vitro against 10 agricultural pathogenic fungi, which consisted of ,ve Fusarium species (F. oxysporum, F. culmorum, F. sambucinum, F. solani and F. acuminatum) and ,ve anastomosis groups of Rhizoctonia solani (AG-3, AG-4, AG-5, AG-9 and AG-11). In general, the oils showed moderate activity against several fungal species, viz F. acuminatum, AG-5 and AG-11. The most signi,cant results were obtained against AG-11 for H. heterophyllum oil. However, both oils increased the growth of some fungal species. In addition, the antifungal activity of 13 pure compounds identi,ed as major components in the essential oils of the Hypericum species studied were determined using microbial growth inhibition assays against the 10 fungal species mentioned above. Among these compounds, both , -caryophyllene oxide and , -terpineol were inhibitory to the growth of all fungi. Copyright © 2003 John Wiley & Sons, Ltd. [source] Microbial communities in roots of Pinus sylvestris seedlings with damping-off symptoms in two forest nurseries as determined by ITS1/2 rDNA sequencingFOREST PATHOLOGY, Issue 4 2009H. Kwa Summary A methodological molecular procedure, which included extraction and cloning of the ITS1/2 rDNA of root-associated organisms with subsequent transformation and sequencing of representative clones, was effective for detection, discrimination and determination of the frequency of the main damping-off pathogens in roots of Pinus sylvestris seedlings growing in different forest-tree nursery soils and exhibiting different rates of disease progress. Roots exhibiting slower damping-off progression were colonized by Fusarium oxysporum, Neonectria radicicola (Ascomycota) and Pythium spp. (Oomycota), which comprised 50% of the microbial community. Roots exhibiting faster damping-off progression were dominated by Thanatephorus cucumeris (Basidiomycota), which comprised 80% of the microbial community. The microbial community was more diverse in roots with slower damping-off progression (14 species) than in roots with faster disease progression (seven species). [source] Pathogenicity of Fusarium verticillioides and Fusarium oxysporum on Pinus nigra seedlings in northwest SpainFOREST PATHOLOGY, Issue 2 2008P. Martín-Pinto Summary Fusarium verticillioides may be responsible for causing significant damping-off damage similar to that incited by F. oxysporum on forest seedlings, resulting in considerable losses in nurseries in northwest of Spain. Traditionally, F. oxysporum has been considered the most important agent of this disease in Spanish forest nurseries. However, recent studies have showed that F. verticillioides also has been frequently isolated from diseased plants. This has increased the necessity for a more comprehensive knowledge of the behaviour and pathogenicity of both Fusarium spp. isolated from these sites. The effect of Fusarium spp. on seed germination and on seedling mortality was analysed by inoculating the fungus at seeding. The in vitro growth of the two species was studied and is discussed in relation to in vivo virulence. Both species caused a reduction in seed germination and an increase in seedling mortality. Mortality caused by F. verticillioides treatments occurred sooner than that for F. oxysporum and the growth rate of F. verticillioides was also greater. [source] Pathogenicity of seed-associated fungi to Podocarpus falcatus in vitroFOREST PATHOLOGY, Issue 1 2005A. Gure Summary Twenty-nine fungi that were isolated from seeds and female cones of Podocarpus falcatus from natural forests in Ethiopia, were assessed for their impact on seeds and seedlings of the same host. Based on the results from in vitro seed inoculation tests, we could group the fungi into five categories as: (i) isolates that were pathogenic only to seeds and had no obvious impacts on the germlings; (ii) isolates that were pathogenic only to the germlings; (iii) isolates that were pathogenic both to seeds and the emerging germlings; (iv) isolates that were more or less harmless; and (v) isolates that were germination promoters. Inoculation tests were also performed on 4,7-day-old aseptically grown seedlings. Fusarium oxysporum and Polyporus sp., were strongly pathogenic to both seeds and seedlings, while Nectria gliocladioides, Peniophora cinerea and Pestalotiopsis neglecta also demonstrated pathogenicity but to a lesser extent. Other isolates, e.g. Diaporthe spp. resulted in increased germination of P. falcatus seeds and no pathogenicity to seedlings. However, further investigations are required in order to find out how these fungi behave under nursery or field conditions. Résumé L'étude porte sur l'impact sur les graines et semis de Podocarpus falcatus de vingt-neuf champignons isolés de graines et fruits du même hôte en forêts naturelles en Ethiopie. D'après les résultats des inoculations de semences in vitro, les champignons peuvent être classés en 5 groupes: (i) les isolats pathogènes uniquement sur graines et sans effet apparent sur plantules; (ii) les isolats pathogènes uniquement sur plantules; (iii) les isolats pathogènes à la fois sur graines et sur plantules émergentes; (iv) les isolats non pathogènes; (v) les isolats favorisant la germination. Des inoculations ont également été pratiquées sur des semis de 4,7 jours produits en conditions axéniques. Fusarium oxysporum et Polyporus sp. montrent un fort pouvoir pathogène à la fois sure graines et semis, Nectria gliocladioides, Peniophora cinerea et Pestalotiopsis neglecta sont également pathogènes mais à un moindre degré. D'autres isolats, comme Diaporthe spp., induisent une augmentation de germination des graines de P. falcatus et ne sont pas pathogènes sur plantules. Des études complémentaires sont nécessaires pour déterminer le comportement de ces champignons en pépinières ou en conditions naturelles. Zusammenfassung Von Samen und weiblichen Zapfen von Podocarpus falcatus aus Naturwäldern in Äthiopien wurden 29 Pilze isoliert und auf ihre Pathogenität an Samen und Sämlinge der gleichen Art getestet. Anhand der Inokulationstests an Samen in vitro wurden die Pilze in 5 Klassen eingeteilt: (i) Pilze, die nur den Samen schädigen und keine Auswirkung auf den Keimling haben; (ii) Pilze, die nur den Keimling schädigen; (iii) Pilze, die sowohl den Samen als auch den Keimling schädigen; (iv) nicht pathogene Pilze; und (v) Pilze, welche die Keimung fördern. Zusätzlich wurden Inokulationstests an vier bis sieben Tage alten steril gekeimten Sämlingen durchgeführt. Fusarium oxysporum und Polyporus sp. waren sowohl an Samen als auch an Keimlingen stark pathogen, Nectria gliocladioides, Peniophora cinerea und Pestalotiopsis neglecta waren weniger stark pathogen. Andere Isolate, wie z.B. Diaporthe spp. waren apathogen und förderten die Keimung. Zur Abklärung des Verhaltens dieser Pilze unter Freilandbedingungen sind jedoch weitere Untersuchungen notwendig. [source] Serological detection and immunogold localization of cross-reactive antigens shared by Camellia sinensis and Exobasidium vexansJOURNAL OF APPLIED MICROBIOLOGY, Issue 5 2007B.N. Chakraborty Abstract Aims:, Pathogenicity of Exobasidium vexans, causal agent of blister blight of tea, was studied in 30 commercially cultivated tea varieties by analysing the antigenic patterns of host and pathogen using immunological techniques. Methods and Results:, Whole plant inoculation of tea varieties with E. vexans showed that T-78 and T-17/1/54 were most susceptible and most resistant respectively. Antigen preparations from tea varieties, pathogen, nonpathogen (Fusarium oxysporum) and of nonhosts (Glycine max, Leucaena leucocephala and Oryza sativa) were compared by indirect enzyme-linked immunosorbent assay and dot-immunobinding assay using polyclonal antibodies raised against the pathogen, nonpathogen, susceptible and resistant tea varieties. Cross-reactive antigens (CRA) were found among susceptible varieties and E. vexans isolates but not in resistant varieties, nonhosts or nonpathogen. Indirect staining of antibodies using fluorescein isothiocyanate indicated CRA were concentrated mainly around epidermal and mesophyll cells in compatible host (T-78). This was substantiated by ultrastructural studies using gold-labelled antibodies through transmission electron microscopy which showed specific localization in the chloroplasts and host cytoplasm. Conclusion:, Pathogenicity of E. vexans to different tea varieties is therefore related to the level of antigenic similarity between host and pathogen. Significance and Impact of the Study:, Immunological methods proved to be valuable in screening commercially cultivated tea varieties against E. vexans. [source] Plant and fungal identity determines pathogen protection of plant roots by arbuscular mycorrhizasJOURNAL OF ECOLOGY, Issue 6 2009Benjamin A. Sikes Summary 1.,A major benefit of the mycorrhizal symbiosis is that it can protect plants from below-ground enemies, such as pathogens. Previous studies have indicated that plant identity (particularly plants that differ in root system architecture) or fungal identity (fungi from different families within the Glomeromycota) can determine the degree of protection from infection by pathogens. Here, we test the combined effects of plant and fungal identity to assess if there is a strong interaction between these two factors. 2.,We paired one of two plants (Setaria glauca, a plant with a finely branched root system and Allium cepa, which has a simple root system) with one of six different fungal species from two families within the Glomeromycota. We assessed the degree to which plant identity, fungal identity and their interaction determined infection by Fusarium oxysporum, a common plant pathogen. 3.,Our results show that the interaction between plant and fungal identity can be an important determinant of root infection by the pathogen. Infection by Fusarium was less severe in Allium (simple root system) or when Setaria (complex root system) was associated with a fungus from the family Glomeraceae. We also detected significant plant growth responses to the treatments; the fine-rooted Setaria benefited more from associating with a member of the family Glomeraceae, while Allium benefited more from associating with a member of the family Gigasporaceae. 4.,Synthesis. This study supports previous claims that plants with complex root systems are more susceptible to infection by pathogens, and that the arbuscular mycorrhizal symbiosis can reduce infection in such plants , provided that the plant is colonized by a mycorrhizal fungus that can offer protection, such as the isolates of Glomus used here. [source] CHEMICAL CHARACTERIZATION AND ANTIFUNGAL ACTIVITY OF ORIGANUM ONITES L. ESSENTIAL OILS AND EXTRACTSJOURNAL OF FOOD SAFETY, Issue 1 2009MIHRIBAN KORUKLUOGLU ABSTRACT Essential oils (EOs) and extracts (methanol, acetone and diethyl ether) of fresh and dried oregano (Origanum onites L.) were used to determine the antifungal effect on Alternaria alternata, Aspergillus flavus (two strains), Aspergillus niger (two strains), Aspergillus parasiticus, Fusarium semitectum, Fusarium oxysporum, Mucor racemosus and Penicillium roqueforti by disk diffusion methods. Minimum inhibitory concentration (MIC) and minimum fungicidal concentration (MFC) of all samples were determined. The antifungal activity of the fresh herb was greater than that of the dried herb. MIC values for fresh and dried methanol extracts were 150,950 µg/mL and 750,950 µg/mL, respectively. MFC values for methanol extracts were determined between 300 and 1200 µg/mL for fresh oregano and between 750 and 1100 µg/mL for dried oregano. The EOs of fresh and dried oregano totally inhibited test fungi. EOs produced the lowest MIC and MFC values: 8.5 µg/mL and 9.0 µg/mL, respectively (P < 0.005). The highest extract activity was exhibited by fresh oregano against A. alternata (24 mm) followed by P. roqueforti (20 mm). The greatest total antifungal effect was observed from methanol extracts. The chemical composition of fresh oregano EO and extracts was examined using gas chromatography-mass spectrometry (GC-MS). Over 80 volatiles were detected, of which 42 were positively identified by matching both MS fragmentation patterns with standardized retention characteristics. p-Cymene, thymol and carvacrol were the most prominent, followed by ,-pinene, camphor and borneol. PRACTICAL APPLICATIONS In the past decade interest in natural antimicrobial plant extracts has been growing. Various plants have historically been used for the purposes of food preservation and flavor enhancement as well as medicinal purposes. An example is oregano, the leafy part of the plant belonging to the Labiatae family. It has been used to improve the flavor and the organoleptic properties of many foods from numerous cultures. It has also been used to prolong the storage life of foods probably because of antifungal properties. The preservative nature of fresh oregano has been employed in many food applications, including meat and fish products, as well as in pharmaceuticals, alternative medicines and natural therapies. [source] In vitro Selection for Fusarium Wilt Resistance in GladiolusJOURNAL OF INTEGRATIVE PLANT BIOLOGY, Issue 5 2008Idrees Ahmad Nasir Abstract Cormels pieces of four Fusarium susceptible Gladiolus cultivars (Friendship, Peter Pears, Victor Borge and Novalux) formed friable calli when cultured in vitro on Murashige and Skoog basal medium containing various concentrations of auxin and cytokinin. The friable calli established cell suspensions. Plantlet regeneration was obtained from the control callus, control cell suspension derived callus and in vitro selected Fusarium oxysporum Schlecht. resistant cell-lines of Friendship. The in vitro cormlets showed 85,95% germination after breaking dormancy of 8 weeks at 4 °C. Cell suspensions of all four Gladiolus cultivars were found to be highly sensitive to fusaric acid. Gradual increase in fusaric acid concentrations to the cell-suspension cultures decreased cell growth considerably. One albino plant was found from the second generation of the in vitro selected cell line of Friendship. The albino plant was found to be highly susceptible to F. oxysporum. The cormlets of all in vitro selected cell lines of Friendship were inoculated with a conidial suspension of the F. oxysporum before planting and were also sprayed with the same spore suspension for further characterization when the height of plants was about 6 cm. The four selected cell lines showed the same response whether or not they were inoculated with conidia of the F. oxysporum. Plantlets of all of the selected cell lines exhibited significant growth as compared with the control after application of conidia of the F. oxysporum. [source] Purification of Angularin, A Novel Antifungal Peptide from Adzuki BeansJOURNAL OF PEPTIDE SCIENCE, Issue 3 2002Dr X. Y. Ye Abstract An antifungal peptide was isolated from the adzuki bean with a procedure involving affinity chromatography on Affi-gel blue gel and ion exchange chromatography on CM-Sepharose. The protein designated angularin was adsorbed on both types of chromatographic media and possessed a molecular weight of 8 kDa. Angularin exhibited antifungal activity against a variety of fungal species including Mycospharella arachidiocola and Botrytis cinerea. It inhibited mycelial growth in B. cinerea with an IC50 of 14.3 µM. Fusarium oxysporum and Rhizoctonia solani were not inhibited. Angularin demonstrated inhibitory activity on translation in the rabbit reticulocyte lysate system (IC50 = 8.0 µM) but did not affect proliferation of splenocytes. The activity of HIV-1 reverse transcriptase was inhibited in the presence of angularin. Its N -terminal sequence was GEPGQKE. Copyright © 2002 European Peptide Society and John Wiley & Sons, Ltd. [source] Gerbera jamesonii, a New Host of Fusarium oxysporum f.sp. tracheiphilumJOURNAL OF PHYTOPATHOLOGY, Issue 1 2010Marco Troisi Abstract The random amplified polymorphic DNA (RAPD) technique was used to analyze the total genomic DNA of pathogenic isolates of Fusarium oxysporum on Gerbera jamesonii by comparing them to representatives of the formae speciales chrysanthemi and tracheiphilum. A close genetic relationship was observed among most of the new isolates from G. jamesonii. They shared RAPD markers with the tested representatives of the forma specialis chrysanthemi. Some isolates of those tested from diseased G. jamesonii were placed in a different cluster, which included representative isolates of forma specialis tracheiphilum. This is the first report of F. oxysporum f.sp. tracheiphilum on G. jamesonii. A rapid protocol for DNA extraction directly from fungal colonies grown on potato dextrose agar allowed complete analysis in less than 4 h. [source] Development of a Sensitive Serological Method for Specific Detection of Latent Infection of Macrophomina phaseolina in CowpeaJOURNAL OF PHYTOPATHOLOGY, Issue 1 2009Leonard Afouda Abstract A double-antibody sandwich enzyme-linked immunosorbent assay (DAS-ELISA) was developed for the specific detection and quantification of Macrophomina phaseolina in plant tissue. Both polyclonal antisera produced against immunogens from mycelium and culture filtrate of M. phaseolina detected the fungus in mycelial and plant extracts, although the antibodies raised against mycelium were more sensitive. No cross-reaction occurred with Rhizopus stolonifer, Pythium ultimum, Mucor hiemalis, Fusarium oxysporum, Septoria nodorum, Rhizoctonia solani, Sclerotinia sclerotiorum, Phytophthora infestans and Aspergillus niger. In enzyme assays, activity of the endo-acting hydrolytic enzymes 1,3-,-glucanase and, less, cellulase, but not xylanase was detected in infected plants. DAS-ELISA was more sensitive than the 1,3-,-glucanase assay. In polyacrylamide gel electrophoresis (PAGE) up to 18 protein bands were observed, with four bands occurring in the 12 tested isolates deriving from various geographical origin in Niger and Nigeria. The enzyme assays and protein patterns were considered not suitable for specific M. phaseolina detection. Macrophomina phaseolina was essentially located in the roots and hypocotyls, and less in epicotyls and leaves of infected plants. The antibodies were also useful to detect latent infection and the infection of cowpea seeds. [source] Use of RAPD and ISSR Markers in Detection of Genetic Variation and Population Structure among Fusarium oxysporum f. sp. ciceris Isolates on Chickpea in TurkeyJOURNAL OF PHYTOPATHOLOGY, Issue 3 2008H. Bayraktar Abstract Genetic variation among the isolates of Fusarium oxysporum f. sp. ciceris, the causal agent of chickpea wilt worldwide, was analysed using pathogenicity tests and molecular markers , random amplified polymorphic DNA (RAPD) and inter-simple sequence repeat (ISSR) polymorphism. Hundred and eight isolates were obtained from diseased chickpea plants in 13 different provinces of Turkey, out of which 74 isolates were assessed using 30 arbitrary decamer primers and 20 ISSR primers. Unweighted pair-grouped method by arithmetic average cluster analysis of RAPD, ISSR and RAPD + ISSR datasets provided a substantially similar discrimination among Turkish isolates and divided into three major groups. Group 1, 2 and 3 consisted of 41, 18 and 15 isolates, respectively. These methods revealed a considerable genetic variation among Turkish isolates, but no correlation with regard to the clustering of isolates from different geographic regions. Analysis of molecular variance confirmed that most genetic variability resulted from the differences among isolates within regions. Our results also indicated that the low-genetic differentiation (FST) and high gene flow (Nm) among populations had a significant effect on the emergence and evolutionary development of F. oxysporum f. sp. ciceris. This is the first report on genetic diversity and population structure of F. oxysporum isolates on chickpea in Turkey. [source] Identification and Regulation of Genes from a Biocontrol Strain of Fusarium oxysporumJOURNAL OF PHYTOPATHOLOGY, Issue 9 2007D. R. Fravel Abstract Differential display with three time points revealed that thiram altered expression of numerous genes in the biocontrol fungus Fusarium oxysporum CS-20. Of the 101 bands purified from the differential display gel, 86 were successfully cloned, and 64 sequenced. Based on nucleic acid sequences, homology to known products was found using BLASTn for 26 sequences and homology to hypothetical proteins was found for six sequences, also from Gibberella zeae. One band (BM1 24-1) showed homology to an ABC transporter from three different fungi. Because of its association with detoxification functions, the ABC transporter was selected for further study. Mycelia of CS-20 were exposed to 25 ,g active ingredient (a.i.) thiram in liquid culture for various times from 0 to 8 h. Quantitative real-time PCR was used to evaluate gene expression. At 30 min after treatment with thiram, the ABC transporter was upregulated 20- to 25-fold relative to the control treatment. The ABC transporter was upregulated 15-fold at 1 h after treatment and 10-fold at 2 h. At 8 h after treatment, there was no difference between treated and non-treated for expression of the ABC transporter. Transcription of the gene encoding EST BM1 24-1 is induced in response to thiram treatment and may function in providing resistance in F. oxysporum isolate CS-20 to fungicides and other toxins. Tolerance to toxins may be critical to the successful inclusion of CS-20 in disease control strategies in cropping systems. [source] Biocontrol and Plant Pathogenic Fusarium oxysporum -Induced Changes in Phenolic Compounds in Tomato Leaves and RootsJOURNAL OF PHYTOPATHOLOGY, Issue 7-8 2007Y. Panina Abstract The biocontrol fungus Fusarium oxysporum strain CS-20 was previously shown to reduce the incidence of Fusarium wilt of tomato through an uncharacterized host-mediated response. As phenolic compounds are involved in the defence response of tomato to pathogens and other stressors, this work was undertaken to determine whether biocontrol strains induced changes in phenolic compounds in leaves and roots of tomato seedlings in the presence and absence of pathogenic F. oxysporum f. sp. lycopersici. Roots of intact tomato seedlings were placed in water or aqueous fungal spore suspensions. Two biocontrol F. oxysporum strains [CS-20 (host-mediated mechanism) and 85SK-1 (control mechanism unknown)] and two plant pathogenic strains of F. oxysporum f. sp. lycopersici Race 1 were used. After 24 or 72 h exposure, phenolic compounds were extracted from leaves and roots before identification by HPLC. There were significant qualitative and quantitative differences between the two sampling times. Compared with the control treatment, strain CS-20 significantly altered (usually increasing) the ferulic, caffeic and vanillic acid contents, and concentrations once unidentified phenolic compounds recovered from leaves and roots. In another experiment, tomato seedlings growing in sterile sand were drenched with spores of strain CS-20 the day before treating them with varying concentrations of spores of the pathogen for 24 or 72 h. The amount of pathogen present did not significantly affect the plant phenolic response to the presence of strain CS-20. This work demonstrates that tomato responds within 24 h to the presence of the biocontrol strain CS-20 by alterations in secondary metabolism that are typical of resistance responses in tomato. [source] Chromatographic Characterization and Phytotoxic Activity of Fusarium oxysporum f. sp. albedinis and Saprophytic Strain ToxinsJOURNAL OF PHYTOPATHOLOGY, Issue 4 2005H. Amraoui Abstract The bayoud disease, vascular fusariosis of date palm tree (Phoenix dactylifera L.), is caused by the pathogenic fungus Fusarium oxysporum f. sp. albedinis. The characteristic symptoms of the bayoud disease were elicited on detached leaves of F. oxysporum f. sp. albedinis -susceptible cultivars of date palm trees, which were treated either with the FII (F. oxysporum f. sp. albedinis) fraction purified from the organic extracts of a F. oxysporum f. sp. albedinis liquid culture, or with a solution of fusaric acid. Enniatins, which are secreted by several Fusarium species, were tested at different concentrations and were not capable of inducing symptoms on such detached leaves. The FII (F. oxysporum f. sp. albedinis) fraction was unable to induce necrosis of potato slices, which indicates that it does not contain significant amounts of enniatins. The high-performance liquid chromatography (HPLC) profiles of the FII (F. oxysporum f. sp. albedinis) fraction showed toxic peaks different from fusaric acid. A fraction, named FII (AZ4), was obtained from culture filtrates of a saprophytic Fusarium strain maintained in the same cultural conditions as for the F. oxysporum f. sp. albedinis. The HPLC profile of the FII (AZ4) fraction did not show the characteristic phytotoxic peaks present in the FII (F. oxysporum f. sp. albedinis) fraction. This finding well agrees with the fact that the FII (AZ4) fraction is not toxic to detached date palm leaves. Moreover, the HPLC profiles of FII fractions obtained from other special forms of F. oxysporum are different the FII (F. oxysporum f. sp. albedinis) profile. The phytotoxic compounds purified from the FII (F. oxysporum f. sp. albedinis) fraction are probably new molecules that may help in understanding the pathogenesis of bayoud disease. [source] Isozyme Analysis and Soluble Mycelial Protein Pattern in Iranian Isolates of Several formae speciales of Fusarium oxysporumJOURNAL OF PHYTOPATHOLOGY, Issue 5 2004M. Mohammadi Abstract A total of 13 representative isolates of Fusarium oxysporum f. sp. melonis (FOM) from Iran, USA and France, eight isolates of seven formae speciales from Iran and one isolate of F. oxysporum f. sp. niveum from the USA were compared based on isozyme analysis and soluble mycelial protein pattern. Isozyme analyses of alkaline phosphatase (ALP), catalase (CAT), esterase (EST), malate dehydrogenase (MDH), superoxide dismutase (SOD) and xanthine dehydrogenase (XDH) revealed polymorphism among the F. oxysporum isolates in which 22 electrophoretic phenotypes (EP) were determined. At least 10 putative loci for these six enzymes were detected and they were all polymorphic. Maximum genetic diversity was observed in CAT, EST and XDH loci. Using UPGMA, the 22 isolates were separated into three main groups with one of the groups divided into two subgroups. Group I included isolates belonging to five formae speciales from Iran, whereas group II that included FOM isolates from both Iran and the USA was divided into two subgroups each containing the vast majority of the respective isolates from either country. Group III constituted FOM isolates from France and one pathogenic isolate on pepper from Iran. FOM isolates representing five different geographical regions from Iran belonged to two different races of 1 and 1,2Y and one vegetative compatibility group (VCG)0134 and thus were genetically homologous. Isozyme polymorphism in these isolates was highly correlated with VCG and geographical origins and to a lesser extent with races. Variations in soluble protein profile in FOM isolates were correlated with genetic distances determined in isozyme analysis. This study suggests that isozyme analysis could be a useful tool for identifying genetic diversity not only in FOM but also several formae speciales of F. oxysporum. [source] Pathogenicity and Vegetative Compatibility of Fusarium oxysporum f. sp. phaseoli in GreeceJOURNAL OF PHYTOPATHOLOGY, Issue 8-9 2002K. Elena Abstract Twenty-seven isolates of Fusarium oxysporum (Fo) obtained from diseased beans from Greece were characterized for pathogenicity to bean cultivars and vegetative compatibility (VCG). Twenty-three isolates were intermediate to highly virulent to five local bean cultivars and characterized as F. oxysporum f. sp. phaseoli (Fop). Zarganes, Gigantes (two selections) and Chondra were the most susceptible cultivars, while Psila was resistant to 10 of the isolates. Four Fo isolates were not pathogenic against tested cultivars. By demonstrating complementation assay, with nitrate non-utilizing (nit) mutants, 15 pathogenic isolates were grouped into one VCG, two isolates into a previously identified VCG 0165 and six into unique unclassified VCGs. The four non-pathogenic Fo isolates failed to anastomose with any tested pathogenic Fop strain. Our results suggest that most of Fop isolates in Greece belong to one VCG. [source] Micro-scale Systematic Sampling of Soil: Heterogeneity in Populations of Fusarium oxysporum, F. solani, F. roseum and F. moniliformeJOURNAL OF PHYTOPATHOLOGY, Issue 11-12 2000M. C. Rodríguez-Molina Abstract The variability of Fusarium spp. density in soil was studied in a field located in Badajoz (south-western Spain). The upper 40 cm of each side of a 1 m × 1 m × 1 m pit were sampled intensively, taking soil samples from points 10 cm apart. The species isolated were F. oxysporum, F. solani, F. roseum and F. moniliforme. For all four sides of the pit population densities of F. oxysporum, F. solani and F. roseum significantly decreased with increasing soil depth and for all the four layers significant differences were detected between sides of the pit. Horizontal variability also occurred on a smaller sampling scale: when a layer of a side was sampled, densities might be significantly different between points in the layer. However, no clear trend in horizontal variability was observed for any species. These findings demonstrate that Fusarium spp. populations were heterogeneously distributed in this reduced soil volume. Zusammenfassung Die Variabilität der Dichte von Fusarium spp. im Boden wurde in einem Feld in Badajoz (Südwestspanien) untersucht. Die oberen 40 cm jeder Seite einer 1 m × 1 m × 1 m großen Grube wurden intensiv beprobt, wobei im Abstand von jeweils 10 cm Bodenproben entnommen wurden. Aus den Proben wurden F. oxysporum, F. solani, F. roseum und F. moniliforme isoliert. An allen vier Seiten der Grube nahmen die Populationsdichten von F. oxysporum, F. solani und F. roseum mit zunehmender Bodentiefe signifikant ab. Bei allen vier Schichten wurden signifikante Unterschiede zwischen den Seiten der Grube festgestellt. Bei kleinerem Beprobungsmaßstab wurde auch horizontale Variabilität festgestellt: Wenn eine Schicht einer Seite beprobt wurde, unterschieden sich die Dichten zwischen den einzelnen Punkten der Schicht teilweise signifikant. Für keine Art war jedoch eine deutliche Tendenz bei der horizontalen Variabilität feststellbar. Die Ergebnisse zeigten, daß die Populationen von Fusarium spp. in diesem kleinen Bodenvolumen heterogen verteilt waren. [source] Survival of Sclerotium cepivorum Sclerotia and Fusarium oxysporum Chlamydospores in Soil Amended with Cruciferous ResiduesJOURNAL OF PHYTOPATHOLOGY, Issue 6 2000U. SmolinskaArticle first published online: 28 JUN 200 Abstract The use of cruciferous plant residues to reduce the amount of sclerotia of Sclerotium cepivorum and chlamydospores of Fusarium oxysporum f. sp. lycopersici in soil was investigated. Air-dried and crushed mustard (Brassica juncea) added to the soil effectively reduced the viability of fungal propagules. Consequently, the reduction of white rot of onion, caused by S. cepivorum and wild of tomato caused by F. oxysporum was observed. The addition of rapeseed (Brassica. napus cv. Bolko and B. napus cv. Gorczanski) residues to soil also resulted in a significant decrease of number of S. cepivorum sclerotia but the effect on F. oxysporum chlamydospores was variable. Introduction of the plant material increased the total number of bacteria, spore-forming bacteria, fluorescent pseudomonads, actinomycetes, and fungi in soil. One year after the soil amendment, the amount of sporeforming bacteria in treatments with cruciferous residues was higher as compared to the control soil without plant residues. The possible contribution of the decomposition of plant residues and soil micro-organisms to the reduction of the pathogens population is discussed. Zusammenfassung Untersucht wurde die Eignung von Kreuzblütler-Pflanzenresten zur Reduktion der Zahl der Sklerotien von Sclerotium cepivorum und der Chlamydosporen von Fusarium oxysporum f. sp. lycopersici im Boden. Wurden luftgetrocknete und zerkleinerte Senfpflanzen (Brassica juncea) als Bodenzusatz verwendet, so war die Lebensfähigkeit der pilzlichen Überdauerungsorgane deutlich verringert. Entsprechend wurde ein Rückgang der durch S. cepivorum hervorgerufenen Weißfäule der Zwiebel und der durch F. oxysporum hervorgerufenen Tomatenwelke beobachtet. Der Zusatz von Raps-Pflanzenresten (Brassica napus cv. Bolko und B. napus cv. Gorczanski) zum Boden führte ebenfalls zu einer signifikanten Abnahme der Zahl von S.-cepivorum -Sklerotien, doch die Wirkung auf die Chlamydosporen von F. oxysporum war unterschiedlich. Die Einbringung des Pflanzenmaterials erhöhte die Gesamtzahl an Bakterien, sporenbildenden Bakterien, fluoreszierenden Pseudomonaden, Actinomyceten und Pilzen im Boden. Ein Jahr nach der Bodenanreicherung war die Zahl sporenbildender Bakterien in den Varianten mit Kreuzblütler-Resten höher als in den Böden der Kontrollvariante ohne Pflanzenreste. Der mögliche Einfluß der Zersetzung der Pflanzenreste und der Bodenmikroorganismen auf die Reduktion der Pathogenpopulation wird diskutiert. [source] Increased effectiveness of the Trichoderma harzianum isolate T-78 against Fusarium wilt on melon plants under nursery conditionsJOURNAL OF THE SCIENCE OF FOOD AND AGRICULTURE, Issue 5 2009Agustina Bernal-Vicente Abstract BACKGROUND: The use of isolates of the genus Trichoderma to control Fusarium wilt in melon plants is one of the most recent and effective alternatives to chemical treatments. In this work we have studied the immobilization of the isolate Trichoderma harzianum T-78 on different carriers as an efficient method to control vascular Fusarium wilt of melon in nurseries. Different formulations were developed: liquids (spore suspension, guar gum and carboxymethylcellulose) and solids (bentonite, vermiculite and wheat bran). RESULTS: The introduction of F. oxysporum resulted in a significant decrease in seedling fresh weight. The treatments which gave a lesser reduction in weight and showing a greater biocontrol effect were the liquid conidial suspension and the solid treatments with bentonite and superficial vermiculite. Microbiological analyses revealed that the conidial suspension and all the solid treatments, except wheat bran, significantly decreased F. oxysporum populations. Of all the treatments assayed, bentonite produced the greatest decline in the F. oxysporum population. CONCLUSIONS: The most effective treatments against Fusarium wilt on melon plants were the solid treatments bentonite and superficial vermiculite. These two treatments gave the greatest plant weight, the lowest percentage of infected plants and the greatest T. harzianum population throughout the assay. Copyright © 2009 Society of Chemical Industry [source] In vitro fungitoxic activity of Larrea divaricata cav. extractsLETTERS IN APPLIED MICROBIOLOGY, Issue 1 2004E.N. Quiroga Abstract Aims:, To evaluate the fungitoxic activity of Larrea divaricata Cav. extract and one of its components against yeasts and fungi. This activity was compared with the action of ketoconazole, a known synthetic antimycotic. Methods and Results:, Antifungal activity of Larrea divaricata extract and of a fraction (Fr. B) purified by thin layer chromatography, was investigated using different methodologies. Both exhibited strong activity against the majority of the assayed fungi. Only Fusarium oxysporum and Schizophyllum commune growth was not affected with the assayed conditions. The fungitoxic and cytotoxic activity of the ethanolic extract and ketoconazole were compared. Conclusions:, Ethanolic extracts of L. divaricata Cav. produce growth inhibition of several fungi. One of its constituents with the same activity was purified and identified as a glycoside of a flavanone. A comparison with the action of ketoconazole, which is currently used as antimycotic and can cause adverse health effects was made. Significance and Impact of the Study:, Our data suggest that L. divaricata extract contains, at least, one compound of phenolic nature, with fungitoxic potency against yeasts and fungi. [source] Isolation and characterization of phorate degrading soil bacteria of environmental and agronomic significanceLETTERS IN APPLIED MICROBIOLOGY, Issue 6 2003N. Bano Abstract Phorate [O,O -diethyl- S -(ethylthio)methyl phosphoradiothioate] degrading bacteria were isolated from agricultural soil and characterized based on their morphological and biochemical characteristics. The selected isolates PS-1, PS-2 and PS-3 were presumptively identified as Rhizobium, Pseudomonas and Proteous species, respectively. The HPLC analysis of phorate in bioaugmented soil revealed its complete disappearance within 40 days. The degradation isotherms of the isolates PS-1, PS-2 and PS-3 suggested time-dependent disappearance of phorate following the first order rate kinetics at the corresponding rate constants of 0·04, 0·05 and 0·04 days,1. Besides, the isolates concurrently exhibited substantial phosphate solubilization, indole acetic acid, and siderophore production. The isolate PS-3 also showed anti-fungal activity against a phytopathogen Fusarium oxysporum. As a result of the multifarious biological properties, the isolates have been suggested to be important bioresource for efficient bioinoculant development. [source] Pathogenesis of Streptoverticillium albireticuli on Caenorhabditis elegans and its antagonism to soil-borne fungal pathogensLETTERS IN APPLIED MICROBIOLOGY, Issue 5 2002J.-O. Park Aims: To examine the biological activity of Streptoverticillium albireticuli. Methods: Isolation of S. albireticuli was carried out using the dry-heat technique. Nematicidal and pathogenic activity on Caenorhabditis elegans was measured by mortality in metabolites and colonization rate on fishmeal extract agar. Antifungal and enzymatic activities of S. albireticuli were measured by the agar plate method and the semidefined solid media method, respectively. Results:S. albireticuli showed strong nematicidal activity against C. elegans . Pathogenic activity was also evident with the colonized nematode by the isolate on fishmeal extract agar. It also showed antifungal activity against certain fungal pathogens such as Rhizoctonia solani , Phytophthora cinnamomi and Fusarium oxysporum . Significance and Impact of the Study: The discovery of an actinomycete showing pathogenic activity against the nematode may indicate the potential for it to be used as a biocontrol agent of parasitic nematodes, in addition to its ability to suppress fungal pathogens. [source] Scanning electron microscopy applied to seed-borne fungi examinationMICROSCOPY RESEARCH AND TECHNIQUE, Issue 7 2009Marcelo De Carvalho Alves Abstract The aim of this study was to test the standard scanning electron microscopy (SEM) as a potential alternative to study seed-borne fungi in seeds, by two different conditions of blotter test and water restriction treatment. In the blotter test, seeds were subjected to conditions that enabled pathogen growth and expression, whereas the water restriction method consisted in preventing seed germination during the incubation period, resulting in the artificial inoculation of fungi. In the first condition, seeds of common bean (Phaseolus vulgaris L.), maize (Zea mays L.), and cotton (Gossypium hirsutum L.) were submitted to the standard blotter test and then prepared and observed with SEM. In the second condition, seeds of cotton (G. hirsutum), soybean (Glycine max L.), and common bean (P. vulgaris L.) were, respectively, inoculated with Colletotrichum gossypii var. cephalosporioides, Colletotrichum truncatum, and Colletotrichum lindemuthianum by the water restriction technique, followed by preparation and observation with SEM. The standard SEM methodology was adopted to prepare the specimens. Considering the seeds submitted to the blotter test, it was possible to identify Fusarium sp. on maize, C. gossypii var. cephalosporioides, and Fusarium oxysporum on cotton, Aspergillus flavus, Penicillium sp., Rhizopus sp., and Mucor sp. on common bean. Structures of C. gossypii var. cephalosporioides, C. truncatum, and C. lindemuthianum were observed in the surface of inoculated seeds. Microsc. Res. Tech., 2009. © 2009 Wiley-Liss, Inc. [source] Fusarium oxysporum: exploring the molecular arsenal of a vascular wilt fungusMOLECULAR PLANT PATHOLOGY, Issue 5 2003Antonio Di Pietro SUMMARY Taxonomy: Vascular wilt fungus; Ascomycete although sexual stage is yet to be found. The most closely related teleomorphic group, Gibberella, is classified within the Pyrenomycetes. Host range: Very broad at the species level. More than 120 different formae speciales have been identified based on specificity to host species belonging to a wide range of plant families. Disease symptoms: Initial symptoms of vascular wilt include vein clearing and leaf epinasty, followed by stunting, yellowing of the lower leafs, progressive wilting of leaves and stem, defoliation and finally death of the plant. In cross-sections of the stem, a brown ring is evident in the area of the vascular bundles. Some formae speciales are not primarily vascular pathogens but cause foot- and rootrot or bulbrot. Economic importance: Causes severe losses on most vegetables and flowers, several field crops such as cotton and tobacco, plantation crops such as banana, plantain, coffee and sugarcane, and a few shade trees. Control: Use of resistant varieties is the only practical measure for controlling the disease in the field. Under greenhouse conditions, soil sterilization can be performed. Alternative control methods with potential for the future include soil solarization and biological control with antagonistic bacteria or fungi. Useful websites: http://www.fgsc.net/fus.htm, http://www-genome.wi.mit.edu/annotation/fungi/fusarium/, http://www.cbs.knaw.nl/fusarium/database.html [source] Antifungal effects of aminosulphoxide and disulphide derivativesMYCOSES, Issue 3 2006Veerle Wittebolle Summary 2-Benzenesulphinyl-(1,4)-naphtoquinone and 14 derivatives were synthesised and were used to evaluate their cytotoxicity against a human myelomonocyte cell line and their antifungal activity against two yeast, i.e. Candida albicans and C. tropicalis and against two filamentous fungi such as Aspergillus niger and Fusarium oxysporum and against one dermatophyte, namely Trichophyton tonsurans. The cytotoxicity and antifungal activities were investigated in comparison with amphotericin B as reference drug. No compound was significantly more toxic than amphotericin B at 0.2 ,g ml,1. The best results of antifungal activity were obtained with GFL 10, GFL 13 and GFL 30 on C. tropicalis, F. oxysporum and T. tonsurans. For C. albicans and A. niger, there was no difference between amphotericin B and the other molecules. The sterol quantitation, the time-kill curves were carried out for these three compounds in order to confirm their action in ergosterol synthesis. Time-kill curves showed a fungistatic activity. For C. tropicalis GFL 10, GFL 13 and GFL 30 increased the growth delay better than amphotericin B, in contrast to F. oxysporum. As for T. tonsurans, GFL10 and GFL13 gave a delay, but the effect of GFL 30 was a bit less marked. [source] | ||||||||||||||||||||||||||||||||||