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Model Legume Lotus Japonicus (model + legume_lotus_japonicu)
Selected AbstractsTrehalose metabolism in root nodules of the model legume Lotus japonicus in response to salt stressPHYSIOLOGIA PLANTARUM, Issue 4 2006Miguel López The effect of NaCl stress (50 mM) and validamycin A treatment (30 ,M) on growth and nitrogen fixation of Lotus japonicus was investigated in plants cultured under symbiotic and hydroponics conditions for teen weeks (flowering stage). Validamycin A was used as a potent trehalase inhibitor, and was able to produce a five-fold increase in the level of trehalose during salt treatment, concomitant with an enhance in biomass (20%) in salinized plants. Alterations of nodule metabolism related to some carbohydrates and some enzyme activities were also examined. The shoot and total plant dry weight were severely affected by saline conditions decreasing by 40% and only 15,20% in plant treated without or with validamycin A, respectively. Nitrogenase activity (E.C. 1.7.9.92) was inhibited almost 40% by salt stress and no effect of validamycin was observed. Based on these results, L. japonicus might be considered as a salt-sensitive legume. In addition, the saline conditions also inhibited the enzyme activities of sucrose synthase (E.C. 2.4.1.13), alkaline invertase (E.C. 3.2.1.26) and trehalose-phosphate synthetase (E.C. 2.4.1.15). The validamycin A treatment mainly decreased enzyme activities: sucrose synthase, trehalose-phosphate phosphatase (E.C. 3.1.3.12) and trehalase (E.C. 3.2.1.28). On the other hand, a high concentration of the carbohydrates, starch, sucrose and glucose, seems not to be the mechanism induced in L. japonicus to protect nodules exposed to NaCl because all these sugars decreased in such conditions. Results of the present study support the possible role of trehalose as an osmoprotectant under salt stress. [source] Mining for robust transcriptional and metabolic responses to long-term salt stress: a case study on the model legume Lotus japonicusPLANT CELL & ENVIRONMENT, Issue 4 2010DIEGO H. SANCHEZ ABSTRACT Translational genomics, the use of model species to generate knowledge about biological processes and the functions of genes, offers great promise to biotechnologists. Few studies have sought robust responses of model plants to environmental stresses, such as salinity, by altering the stress dosage or by repeating experiments in consecutive years and/or different seasons. We mined our published and unpublished data on legume salt acclimation for robust system features at the ionomic, transcriptomic and metabolomic levels. We analysed data from the model legume Lotus japonicus, obtained through six independent, long-term, non-lethal salt stress experiments which were carried out over two consecutive years. Best possible controlled greenhouse conditions were applied and two main questions asked: how reproducible are results obtained from physiologically meaningful salinity experiments, and what degree of bias may be expected if conclusions are drawn from less well-repeated sampling? A surprisingly large fraction of the transcriptional and metabolic responses to salt stress were not reproducible between experiments. A core set of robust changes was found that was shared between experiments. Many of these robust responses were qualitatively and quantitatively conserved between different accessions of the same species, indicating that the robust responses may be a sound starting point for translational genomics. [source] Integrative functional genomics of salt acclimatization in the model legume Lotus japonicusTHE PLANT JOURNAL, Issue 6 2008Diego H. Sanchez Summary The model legume Lotus japonicus was subjected to non-lethal long-term salinity and profiled at the ionomic, transcriptomic and metabolomic levels. Two experimental designs with various stress doses were tested: a gradual step acclimatization and an initial acclimatization approach. Ionomic profiling by inductively coupled plasma/atomic emission spectrometry (ICP-AES) revealed salt stress-induced reductions in potassium, phosphorus, sulphur, zinc and molybdenum. Microarray profiling using the Lotus Genechip® allowed the identification of 912 probesets that were differentially expressed under the acclimatization regimes. Gas chromatography/mass spectrometry-based metabolite profiling identified 147 differentially accumulated soluble metabolites, indicating a change in metabolic phenotype upon salt acclimatization. Metabolic changes were characterized by a general increase in the steady-state levels of many amino acids, sugars and polyols, with a concurrent decrease in most organic acids. Transcript and metabolite changes exhibited a stress dose-dependent response within the range of NaCl concentrations used, although threshold and plateau behaviours were also observed. The combined observations suggest a successive and increasingly global requirement for the reprogramming of gene expression and metabolic pathways to maintain ionic and osmotic homeostasis. A simple qualitative model is proposed to explain the systems behaviour of plants during salt acclimatization. [source] Proliferating Floral Organs (Pfo), a Lotus japonicus gene required for specifying floral meristem determinacy and organ identity, encodes an F-box proteinTHE PLANT JOURNAL, Issue 4 2003Shulu Zhang Summary To study flower development in the model legume Lotus japonicus, a population of transgenic plants containing a maize transposable element (Ac) in their genome was screened for floral mutants. One mutation named proliferating floral organs (pfo) causes plants to produce a large number of sepal-like organs instead of normal flowers. It segregates as a single recessive Mendelian locus, and causes sterility. Scanning electron microscopy revealed that pfo affects the identity, number and arrangement of floral organs. Sepal-like organs form in the first whorl, and secondary floral meristems are produced in the next whorl. These in turn produce sepal-like organs in the first whorl and floral meristems in the second whorl, and the process is reiterated. Petals and stamens are absent while carpels are either absent or reduced. The pfo phenotype was correlated with the presence of an Ac insertion yielding a 1.6-kb HindIII restriction fragment on Southern blots. Both the mutant phenotype and this Ac element are unstable. Using the transposon as a tag, the Pfo gene was isolated. Conceptual translation of Pfo predicts a protein containing an F-box, with high overall similarity to the Antirrhinum FIMBRIATA, Arabidopsis UNUSUAL FLORAL ORGANS and Pisum sativum Stamina pistilloida proteins. This suggests that Pfo may regulate floral organ identity and meristem determinacy by targeting proteins for ubiquitination. [source] | ||||||||||