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Selected AbstractsQuantifying the impact of soil water repellency on overland flow generation and erosion: a new approach using rainfall simulation and wetting agent on in situ soilHYDROLOGICAL PROCESSES, Issue 17 2007G. Leighton-Boyce Abstract The conventional view of soil water repellency is that it promotes overland flow and soil erosion, but this is not always borne out by observations. This study aimed to isolate the effects of repellency on long-unburnt and recently burnt terrain on infiltration, overland flow and erosion at the small plot scale (0·36 m2). Rainfall simulations (30 min; intensity 100 mm h,1), using untreated water, and water treated with surfactants to eliminate repellency, were conducted on in situ repellent soils in fire-prone Eucalyptus globulus plantations, north-central Portugal at (i) a long-unburnt site with and without litter, and (ii) a recently burnt site. On long-unburnt terrain, the mean overland flow coefficient (33%) was 16 times higher and mean slopewash was 23 times higher under repellent compared with wettable conditions. On recently burnt terrain, no overland flow was recorded under wettable conditions, while under repellent conditions the mean coefficient was 70%. The water storage capacity of the litter layer under 10-year-old eucalyptus stands for dry antecedent conditions was at least 3 mm water depth per cm litter depth, implying at least a delay to the onset of overland flow. Severe repellency (36% ethanol) was found to persist through a 30-min storm (100 mm h,1) when a litter layer was present. A continuous wetting front was observed in the upper ,1 cm of exposed soil, indicating a breakdown in repellency at the time of observation. Below ,1 cm, repellent, dry soil conditions generally persisted through the simulated storm event. A major implication is that prediction of hydrological impacts of repellency must also take into account the infiltration characteristics of any litter layer and any non-repellent soils, if present. Copyright © 2007 John Wiley & Sons, Ltd. [source] Observer experience improves reproducibility of color doppler sonography of orbital blood vesselsJOURNAL OF CLINICAL ULTRASOUND, Issue 6 2002János Németh MD Abstract Purpose. The study investigated the reproducibility of orbital blood flow measurements with color Doppler imaging (CDI) at different stages of observer experience. Methods. The subjects were 31 healthy volunteers and 2 sequential groups of 25 glaucoma patients each. Repeated blood flow measurements (usually 3 sets) in orbital vessels (ophthalmic artery, short posterior ciliary arteries, central retinal artery, and central retinal vein) were performed by the same observer in a single session in each subject. Results. The parameters with the best reproducibility were the resistance index (mean coefficient of variation [COV], 3.3,8.8%), the peak systolic velocity (mean COV, 6.9,13.7%), the time-averaged velocity (mean COV, 7.2,16.0%), and the systolic acceleration time (mean COV, 8.8,12.3%). The mean COV was greater (9.9,20.3%) for the other arterial flow parameters (end-diastolic velocity and systolic acceleration) and for the venous flow velocities (maximum and minimum). The COVs of the parameters were improved by 20,40% as the observer became more experienced in ophthalmic CDI. Conclusions. We confirm the general reliability of CDI measurements in orbital vessels and show that observer experience improves reproducibility. It appears, however, that observer performance in these measurements is vessel specific. © 2002 Wiley Periodicals, Inc. J Clin Ultrasound 30:332,335, 2002; Published online in Wiley InterScience (www.interscience.wiley.com). DOI: 10.1002/jcu.10079 [source] VARIATION OF LAG TIME AND SPECIFIC GROWTH RATE AMONG 11 STRAINS OF SALMONELLA INOCULATED ONTO STERILE GROUND CHICKEN BREAST BURGERS AND INCUBATED AT 25C,JOURNAL OF FOOD SAFETY, Issue 4 2000THOMAS P. OSCAR ABSTRACT One strain of 11 serotypes or 11 strains of Salmonella, which were isolated from the ceca of broilers, were surveyed for their growth kinetics on sterile ground chicken breast burgers incubated at 25C to determine the variation of lag time and specific growth rate. Growth curves, four per strain, were fit to a two-phase linear model to determine lag time (h) and specific growth rate (log10/h). Repeatability of growth kinetics measurements for individual strains had a mean coefficient of variation of 11.7% for lag time (range: 5.8 to 17.3%) and a mean coefficient of variation of 6.7% for specific growth rate (range: 2.7 to 13.3%). Lag time among strains ranged from 2.2 to 3.1 h with a mean of 2.8 h for all strains, whereas specific growth rate among strains ranged from 0.3 to 0.38 log10 per h with a mean of 0.35 log10per h for all strains. One-way analysis of variance indicated that lag time (P =0.029) and specific growth rate (P =0.025) differed slightly among strains. S. Haardt had a shorter (P < 0.05) lag time than S. Agona and S. Brandenburg, whereas the specific growth rate of S. Enteritidis was less than (P < 0.05) the specific growth rates of S. Typhimurium and S. Brandenburg. All other strains had similar lag times and specific growth rates. The coefficient of variation among strains was 9.4% for lag time and 5.7% for specific growth rate. These results indicate that there were only minor differences in the lag times and specific growth rates among the strains of Salmonella surveyed. Thus, the growth kinetic values obtained with one strain of Salmonella may be useful for predicting the growth of other strains of Salmonella for which data do not currently exist. [source] Masting and trophic cascades: interplay between rowan trees, apple fruit moth, and their parasitoid in southern NorwayOIKOS, Issue 3 2004Akiko Satake We analyzed berry production in rowan, Sorbus aucuparia L., in southern Norway and examined the ramifying effects of rowan masting on the dynamics of the dominant seed predator and its parasitoid. The apple fruit moth, Argyresthia conjugella Zeller, is a pre-dispersal seed predator of rowan. The larva of the apple fruit moth rely on rowan berries, which in turn is attacked by the parasitoid wasp, Microgaster politus Marsh. We found classic masting in rowan: berry production varied across years (the mean coefficient of variation=1.02) and was spatially synchronized at large scale (the averaged correlation coefficient=0.67). Berry production represented a two-year cycle in western but a three-year cycle in eastern Norway. The abundance of the moth and the parasitoid also varied across years and were spatially synchronized. The degree of spatial synchrony decreased and cyclicity became obscure with increasing trophic level. We attempted to assess two different components to the predator satiation, functional and numerical satiations, based on a simple population dynamics model. The observed pattern of seed predation testified that both of functional and numerical satiations were at work in this system. In a comparison at different locations, rowan trees with more variable berry production were more effective in reducing losses to the seed predator. The parasitoids also seemed to experience satiation through the fluctuation in their host abundance. These results show that rowan masting has an adaptive foundation, which impacts the dynamics of higher trophic levels. [source] Validation of multi-detector computed tomography as a non-invasive method for measuring ovarian volume in macaques (Macaca fascicularis)AMERICAN JOURNAL OF PRIMATOLOGY, Issue 6 2010Jeryl C. Jones Abstract The purpose of this study was to validate low radiation dose, contrast-enhanced, multi-detector computed tomography (MDCT) as a non-invasive method for measuring ovarian volume in macaques. Computed tomography scans of four known-volume phantoms and nine mature female cynomolgus macaques were acquired using a previously described, low radiation dose scanning protocol, intravenous contrast enhancement, and a 32-slice MDCT scanner. Immediately following MDCT, ovaries were surgically removed and the ovarian weights were measured. The ovarian volumes were determined using water displacement. A veterinary radiologist who was unaware of actual volumes measured ovarian CT volumes three times, using a laptop computer, pen display tablet, hand-traced regions of interest, and free image analysis software. A statistician selected and performed all tests comparing the actual and CT data. Ovaries were successfully located in all MDCT scans. The iliac arteries and veins, uterus, fallopian tubes, cervix, ureters, urinary bladder, rectum, and colon were also consistently visualized. Large antral follicles were detected in six ovaries. Phantom mean CT volume was 0.702±SD 0.504,cc and the mean actual volume was 0.743±SD 0.526,cc. Ovary mean CT volume was 0.258±SD 0.159,cc and mean water displacement volume was 0.257±SD 0.145,cc. For phantoms, the mean coefficient of variation for CT volumes was 2.5%. For ovaries, the least squares mean coefficient of variation for CT volumes was 5.4%. The ovarian CT volume was significantly associated with actual ovarian volume (ICC coefficient 0.79, regression coefficient 0.5, P=0.0006) and the actual ovarian weight (ICC coefficient 0.62, regression coefficient 0.6, P=0.015). There was no association between the CT volume accuracy and mean ovarian CT density (degree of intravenous contrast enhancement), and there was no proportional or fixed bias in the CT volume measurements. Findings from this study indicate that MDCT is a valid non-invasive technique for measuring the ovarian volume in macaques. Am. J. Primatol. 72:530,538, 2010. © 2010 Wiley-Liss, Inc. [source] Reproducibility and variability of activated clotting time measurements in the cardiac catheterization laboratoryCATHETERIZATION AND CARDIOVASCULAR INTERVENTIONS, Issue 3 2005Terence M. Doherty Abstract The objective of this study was to characterize the reproducibility and variability in the measurement to the activated clotting time (ACT) when performed on two different types of instruments, the HemoTec ACT (Medtronic) and the Hemochron 801 (International Technidyne). The ACT has evolved into the most common point-of-care test used in the cardiac catheterization lab to manage patient heparinization. Since the test has not been standardized, different systems frequently produce different results under the same clinical conditions. Duplicate paired ACT tests (n = 885) from 359 patients were performed on both instruments. Prothrombin times (PT) and activated partial thromboplastin times (aPTT) were also determined on subsets of these same samples (PT = 533; aPTT = 487). The performance and relationships between the two tests were determined using a variety of statistical analytical techniques. The average difference between the ACT devices was only 8 sec, yet more than 60% of the measurements varied by more than 10%. Over one-fourth of measurements varied by more than 20%. The reproducibility to the HemoTec instrument was superior to the Hemochron instrument across the entire range of ACTs measured (mean coefficient of variation 2.4% 54± 3.1% vs. 7.2% 54± 6.1% for HemoTec and Hemochron, respectively; P < 0.00001; range = 65,555 sec). The relationship between the two ACTs was nonlinear. In therapeutic ranges used for interventional procedures (200,350 sec), HemoTec and Hemochron ACTs are not comparable to one another. Statistical comparative analysis indicated that the HemoTec ACT has better overall performance. © 2005 Wiley-Liss, Inc. [source] Quantitative analysis of human mitochondrial DNA using a real-time PCR assayHIV MEDICINE, Issue 3 2003K Gourlain Objectives Known for their ability to inhibit the human DNA polymerase-,, nucleoside analogues induce toxic effects on mitochondria ranging from increased serum lactate levels to fatal lactic acidosis. DNA polymerase-, ensures the mitochondrial DNA (mtDNA) replication and, thus, its inhibition leads to the decrease of the mtDNA. We describe a real-time PCR assay for mtDNA quantification associating DNA extraction procedures applied on peripheral blood mononuclear cells (PBMCs) and subcutaneous adipose tissues and to study the antiretroviral effect on mitochondria. Methods Total DNA was extracted from PBMCs and subcutaneous adipose tissues. Nuclear and mitochondrial genes were amplified to determine the number of copies of mtDNA per cell using a cyt-b recombinant plasmid as standard control. We analysed eight HIV-infected asymptomatic patients never treated, four patients who had been treated for 6 months with highly active antiretroviral therapy (HAART) and six non-infected donors. Results The mtDNA quantification gave rise to reproducible results as the mean coefficients of variation were 1.09% for replicates of samples undertaken 10 times within the same run, and 5.78% and 3.7% for replicates tested in five different runs at 1:100 and 1:1000 dilutions, respectively. Median levels of mtDNA in PBMCs of healthy donors, naive and treated HIV-infected patients were 2.94, 2.78 and 1.93 log HIV-1 RNA copies/mL, respectively. Whereas DNA from PBMCs was shown to be devoid of inhibitors, subcutaneous adipose tissues needed an extra treatment as they were found to be highly inhibited. Conclusions The method generated consistent and reproducible results and was successfully applied to DNAs extracted from PBMCs and subcutaneous adipose tissues with adapted extraction. The mtDNA changes in PBMCs were found to be fast as they fall off after 6 months' therapy, decreasing from 2.78 to 1.93 log copies/mL. [source] |