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Marked Individuals (marked + individual)
Selected AbstractsEstimating Abundance Using Mark,Resight When Sampling Is with Replacement or the Number of Marked Individuals Is UnknownBIOMETRICS, Issue 1 2009Brett T. McClintock Summary Although mark,resight methods can often be a less expensive and less invasive means for estimating abundance in long-term population monitoring programs, two major limitations of the estimators are that they typically require sampling without replacement and/or the number of marked individuals available for resighting to be known exactly. These requirements can often be difficult to achieve. Here we address these limitations by introducing the Poisson log and zero-truncated Poisson log-normal mixed effects models (PNE and ZPNE, respectively). The generalized framework of the models allow the efficient use of covariates in modeling resighting rate and individual heterogeneity parameters, information-theoretic model selection and multimodel inference, and the incorporation of individually unidentified marks. Both models may be implemented using standard statistical computing software, but they have also been added to the mark,recapture freeware package Program MARK. We demonstrate the use and advantages of (Z)PNE using black-tailed prairie dog data recently collected in Colorado. We also investigate the expected relative performance of the models in simulation experiments. Compared to other available estimators, we generally found (Z)PNE to be more precise with little or no loss in confidence interval coverage. With the recent introduction of the logit-normal mixed effects model and (Z)PNE, a more flexible and efficient framework for mark,resight abundance estimation is now available for the sampling conditions most commonly encountered in these studies. [source] Interactive effects of distance and matrix on the movements of a peatland dragonflyECOGRAPHY, Issue 5 2009Krista S. Chin We conducted a mark,release,recapture survey of a peatland dragonfly (Leucorrhinia hudsonica) in each of two years (2002; 2003) in a harvested forest landscape in western Newfoundland, Canada. The odds of an individual male moving between peatlands was influenced by both the distance between peatlands and the type of intervening habitat (the matrix). Specifically, at meso scales (>700,m) there was a positive effect of the amount of cut matrix between peatlands on the odds of moving, but at fine scales (<700,m) there was the opposite effect; proportionally fewer individuals moved between peatlands. The odds of moving out of a peatland decreased as the surface area of water in the peatland increased. Multi-state mark,recapture models showed that the daily probability of a male moving between any two peatlands was 1.9% in 2002 and 6.9% in 2003 (n=1527 and 1280 marked individuals). The results suggest that additional empirical studies that directly measure patterns of movement with respect to landscape structure at multiple spatial scales in other taxa and situations are needed in order to uncover other possible non-linear changes in behavior. [source] Combined effects of fisheries and climate on a migratory long-lived marine predatorJOURNAL OF APPLIED ECOLOGY, Issue 1 2008V. Rolland Summary 1The impact of climate on marine ecosystems is now well documented, but remains complex. Climate change may interact with human activities to effect population dynamics. In addition, in migratory species conditions are different between the breeding and wintering grounds, resulting in more complex dynamics. All these possible effects should be considered to predict the future of endangered species, but very few studies have investigated such combined interactions. 2As a case study, we assessed the relative impact of fisheries and of oceanographic conditions in breeding and wintering sites on adult survival and breeding success of a population of the endangered black-browed albatross Thalassarche melanophrys in the Kerguelen Islands, Southern Indian Ocean. This study was based on long-term monitoring of individually marked individuals (1979,2005) and identification by tracking studies and band recoveries of the oceanic feeding zones used during breeding and non-breeding seasons. 3Breeding success was variable until 1997 and then declined gradually, from 0·88 to 0·48 chicks per egg laid. It was favoured by positive sea-surface temperature anomalies (SSTA) and trawl fishery during the breeding period, whereas it was negatively affected by positive SSTA around Tasmania, where the species winters. Adult survival was 0·918 ± 0·004 on average and increased with SSTA during incubation, but decreased significantly with high tuna longlining effort in the wintering zone. 4Our analyses show that demographic parameters were influenced by both climate and fisheries in both breeding and wintering grounds, but with different effect size. Black-browed albatross breeding success was more favoured by trawlers' offal and discards than by any of the seasonally/spatially oceanographic conditions, whereas their survival was equally affected by tuna longline fishery through incidental by-catch and spring SSTA. 5Synthesis and applications. Our work underlines that a comprehensive knowledge of the life history of a species in all the habitats used is important to disentangle the respective roles of environmental conditions and human factors on population dynamics. Identification of these effects is required when proposing effective conservation measures, because the conservation of threatened species may depend on their wintering country's exclusive economic zones. [source] Improving the analysis of movement data from marked individuals through explicit estimation of observer heterogeneityJOURNAL OF AVIAN BIOLOGY, Issue 1 2010Fränzi Korner-Nievergelt Ring re-encounter data, in particular ring recoveries, have made a large contribution to our understanding of bird movements. However, almost every study based on ring re-encounter data has struggled with the bias caused by unequal observer distribution. Re-encounter probabilities are strongly heterogeneous in space and over time. If this heterogeneity can be measured or at least controlled for, the enormous number of ring re-encounter data collected can be used effectively to answer many questions. Here, we review four different approaches to account for heterogeneity in observer distribution in spatial analyses of ring re-encounter data. The first approach is to measure re-encounter probability directly. We suggest that variation in ring re-encounter probability could be estimated by combining data whose re-encounter probabilities are close to one (radio or satellite telemetry) with data whose re-encounter probabilities are low (ring re-encounter data). The second approach is to measure the spatial variation in re-encounter probabilities using environmental covariates. It should be possible to identify powerful predictors for ring re-encounter probabilities. A third approach consists of the comparison of the actual observations with all possible observations using randomization techniques. We encourage combining such randomisations with ring re-encounter models that we discuss as a fourth approach. Ring re-encounter models are based on the comparison of groups with equal re-encounter probabilities. Together these four approaches could improve our understanding of bird movements considerably. We discuss their advantages and limitations and give directions for future research. [source] Spatial and temporal variation in the fruiting phenology of palms in isolated standsPLANT SPECIES BIOLOGY, Issue 1 2008GREGORY H. ADLER Abstract Fruiting phenologies of two species of palms, Astrocaryum standleyanum L. H. Bailey and Attalea butyracea (Mutis ex L. f) Wess. Boer, isolated on eight small (1.7,3.7 ha) forested islands in the Panama Canal were studied over a 33-month period. Individual palms were permanently marked with numbered aluminum tags and censused each month for the presence of ripe fruits. The dataset consisted of 1106 monthly observations of palms with ripe fruits among the 634 marked individuals. Mean densities of palms of reproductive size varied widely among islands, ranging from a low of 0.3 ha,1 for A. standleyanum and 3.5 ha,1 for A. butyracea to a high of 44.9 ha,1 for A. standleyanum and 33.7 ha,1 for A. butyracea. Both species showed distinctly seasonal periods of fruiting activity that varied in duration between the two species and among years. The timing of fruiting by A. standleyanum was highly synchronous among islands, whereas inter-island synchrony in A. butyracea was less pronounced. The percentages of marked individuals that fruited varied widely among islands and years. Results indicated that these palms responded to both spatially and temporally variable conditions that promoted fruit production. We suggest that pollinator abundances are a crucial factor affecting reproductive output. Conditions that favor successful reproduction and seed dispersal, such as pollinator activity and the attraction of dispersal agents, may be the ultimate factors that have influenced the reproductive phenologies of these two species of palms. [source] Lifetime sexual dimorphism in Juniperus communis var. communisPLANT SPECIES BIOLOGY, Issue 1 2007LENA K. WARD Abstract The sexes of dioecious Juniperus communis were differentially affected over their lifetime in response to ecological and physiological stress in populations of different ages studied over 23 years in southern England. In a young population, the female survival rate was less than the male rate, with more females dying during a severe attack by rabbits and later with fungus disease in the roots. The sex ratio (female : male) in marked individuals was predicted by age, changing from 1:1.13 in 1983 to 1:1.32 in 2005. In an old senescing population, where two-thirds of the individuals died, the sex ratio varied, but overall became more male biased (1:1.51,1:2.10). Males had a greater resistance to terminal disease, and were slightly older than females at death (110 years compared to 106). Young females grew less than males, presumably because of greater trade-offs with reproductive effort: the mean annual shoot growth was 6.7 cm compared to 8.1 cm in males. By approximately 30 years of age, heights of the sexes were significantly different. The annual growth of old females (4.8 cm) was greater than that in males (4.3 cm), possibly because males survived longer in poor health. Sexual differences in height in the old population were progressively lost. Cone abundance in females was less than that in males and cone production had greater periodicity; the young population outperformed the old. There were slightly longer time lags in inverse correlations between growth and reproductive indices in females. [source] Dolphins in a bottle: abundance, residency patterns and conservation of bottlenose dolphins Tursiops truncatus in the semi-closed eutrophic Amvrakikos Gulf, GreeceAQUATIC CONSERVATION: MARINE AND FRESHWATER ECOSYSTEMS, Issue 2 2008Giovanni Bearzi Abstract 1.Boat surveys were conducted between 2002 and 2005 to study bottlenose dolphins living in the 400 km2 Amvrakikos Gulf, western Greece. During 116 survey days, 4705 km of total effort resulted in the individual photo-identification of 106 animals, through long-term natural markings on their dorsal fins. 2.Mark,recapture analyses based on the Mth model provided estimates of 82 marked individuals in 2003 (95% CI=80,91), 92 in 2004 (95% CI=86,108) and 98 in 2005 (95% CI=94,110). To include the unmarked portion of the population, the proportion of unmarked individuals was computed based on the number of photographs of marked and unmarked dorsal fins. The mean proportion of unmarked animals in the population was 0.338 (95% CI=0.288,0.389). By adding this to the estimate for marked animals in 2005, considered as the most robust, a total population estimate of 148 individuals (95% CI=132,180) was obtained. 3.Dolphin encounter rates in 2003,2005 did not show significant variations, and averaged 7.2 groups per 100 km or 72.5 individuals per 100 km. Encounter rates within the Gulf were about one order of magnitude greater than those found for bottlenose dolphins in nearby eastern Ionian Sea coastal waters. 4.Mean dolphin density in the Gulf was 0.37 animals km,2. This relatively high density, together with high levels of site fidelity shown by most individuals, was thought to be related primarily to prey availability, particularly of epipelagic schooling fish. 5.The importance of the semi-closed Amvrakikos Gulf for bottlenose dolphins and other threatened species encourages the adoption of measures aimed to conserve its valuable ecosystems and raise the naturalistic profile of the area, while promoting environment-conscious development. Meaningful action includes restoring natural hydrology (e.g. freshwater input from rivers), curtailing pollution from various sources, responsible fisheries and aquaculture management, and control of illegal fishing. Interactions between dolphins and fisheries also deserve careful quantitative investigation. Copyright © 2007 John Wiley & Sons, Ltd. [source] Population ecology of the velvet gecko, Oedura lesueurii in south eastern Australia: Implications for the persistence of an endangered snakeAUSTRAL ECOLOGY, Issue 7 2008JONATHAN K. WEBB Abstract Ecological specialization, such as major dependence upon a single-prey species, can render a predator taxon vulnerable to extinction. In such cases, understanding the population dynamics of that prey type is important for conserving the predator that relies upon it. In eastern Australia, the endangered broad-headed snake Hoplocephalus bungaroides feeds largely on velvet geckos (Oedura lesueurii). We studied growth, longevity and reproduction in a population of velvet geckos in Morton National Park in south-eastern Australia. We marked 458 individual geckos over a 3-year period (1992,1995) and made yearly visits to field sites from 1995,2006 to recapture marked individuals. Female geckos grew larger than males, and produced their first clutch at age 4 years. Males can mature at 2 years, but male,male combat for females probably forces males to delay reproduction until age 3 years. Females lay a single clutch of two eggs in communal nests in November, and up to 22 females deposited eggs in a single nest. Egg hatching success was high (100%), and juveniles had high survival (76%) during their first 6 months of life. Velvet geckos are long-lived, and the mean age of marked animals recaptured after 1995 was 6.1 years (males) and 8.4 years (females). Older females (7.5,9.5 years) were all gravid when last recaptured. Like other temperate-climate gekkonids, O. lesueurii has a ,slow' life history, and population viability could be threatened by any factors that increase egg or adult mortality. Two such factors , the removal of ,bush rocks' for urban gardens, and the overgrowth of rock outcrops by vegetation , could render small gecko populations vulnerable to extinction. In turn, the reliance of predatory broad-headed snakes on this slow-growing lizard species may increase its vulnerability to extinction. [source] | ||||||||||