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Marine Phytoplankton (marine + phytoplankton)
Selected AbstractsMETABOLIC AND ECOLOGICAL CONSTRAINTS IMPOSED BY SIMILAR RATES OF AMMONIUM AND NITRATE UPTAKE PER UNIT SURFACE AREA AT LOW SUBSTRATE CONCENTRATIONS IN MARINE PHYTOPLANKTON AND MACROALGAE,JOURNAL OF PHYCOLOGY, Issue 2 2007T. Alwyn Marine phytoplankton and macroalgae acquire important resources, such as inorganic nitrogen, from the surrounding seawater by uptake across their entire surface area. Rates of ammonium and nitrate uptake per unit surface area were remarkably similar for both marine phytoplankton and macroalgae at low external concentrations. At an external concentration of 1 ,M, the mean rate of nitrogen uptake was 10±2 nmol·cm,2·h,1 (n=36). There was a strong negative relationship between log surface area:volume (SA:V) quotient and log nitrogen content per cm2 of surface (slope=,0.77), but a positive relationship between log SA:V and log maximum specific growth rate (,max; slope=0.46). There was a strong negative relationship between log SA:V and log measured rate of ammonium assimilation per cm2 of surface, but the slope (,0.49) was steeper than that required to sustain ,max (,0.31). Calculated rates of ammonium assimilation required to sustain growth rates measured in natural populations were similar for both marine phytoplankton and macroalgae with an overall mean of 6.2±1.4 nmol·cm,2·h,1 (n=15). These values were similar to maximum rates of ammonium assimilation in phytoplankton with high SA:V, but the values for algae with low SA:V were substantially less than the maximum rate of ammonium assimilation. This suggests that the growth rates of both marine phytoplankton and macroalgae in nature are often constrained by rates of uptake and assimilation of nutrients per cm2 surface area. [source] PRODUCTION OF PHYTOCHELATINS AND GLUTATHIONE BY MARINE PHYTOPLANKTON IN RESPONSE TO METAL STRESS,JOURNAL OF PHYCOLOGY, Issue 5 2006Silvia K. Kawakami Phytoplankton deal with metal toxicity using a variety of biochemical strategies. One of the strategies involves glutathione (GSH) and phytochelatins (PCs), which are metal-binding thiol peptides produced by eukaryotes and these compounds have been related to several intracellular functions, including metal detoxification, homeostasis, metal resistance and protection against oxidative stress. This paper assesses our state of knowledge on the production of PCs and GSH by marine phytoplankton in laboratory and field conditions and the possible applications of PCs for environmental purposes. Good relationships have been observed between metal exposure and PC production in phytoplankton in the laboratory with Cd, Pb, and Zn showing the greatest efficacy, thereby indicating that PCs have a potential for application as a biomarker. Fewer studies on PC distributions in particulate material have been undertaken in the field. These studies show that free Cu has a strong relationship with the levels of PC in the particulate material. The reason for this could be because Cu is a common contaminant in coastal waters. However it could also be due to the lack of measurements of other metals and their speciation. GSH shows a more complex relationship to metal levels both in the laboratory and in the field. This is most likely due to its multifunctionality. However, there is evidence that phytoplankton act as an important source of dissolved GSH in marine waters, which may form part of the strong organic ligands that control metal speciation, and hence metal toxicity. [source] rRNA PROBES FOR IDENTIFICATION AND CHARACTERIZATION OF MARINE PHYTOPLANKTON: THEIR POTENTIAL APPLICATION FOR DNA MICROCHIPSJOURNAL OF PHYCOLOGY, Issue 2001Article first published online: 24 SEP 200 Groben R., Lange, M. & Medlin, L. K. Alfred Wegener Institute for Polar and Marine Research, Am Handelshafen 12, D-27570 Bremerhaven, Germany A fast and reliable identification of nano- and picoplankton by light microscopy is often difficult because of the lack of usable morphological characteristics, whereas electron microscopy and biochemical methods are very time consuming. Identification of toxic algae also requires a great deal of taxonomic experrtise so that false positives are not recorded. One solution is to use taxon specific rRNA probes. For this purpose we designed probes for phytoplankton taxa, including toxic algae. These probes were either labelled with Digoxigenin (DIG) and used in DNA dot blot experiments, or labelled with fluorochromes and used in whole-cell hybridisations with fluorescence microscopy or flow cytometric detection. Specific probes could be used over a broad taxonomic range from higher groups (i.e. the class of dinoflagellates) to species level (i.e. Prorocentrum lima). These probes were be used in the EU MAST project AIMS for the development of an automated identification system for marine phytoplankton in combination with flow cytometry and artificial neural networks (ANNs), in the EU MAST DETAL and in the German national project (TEPS) for the development of an early warning system for harmful algal blooms. Results using Digoxigenin (DIG)-labelled probes on picoplankton samples taken from several water bodies indicate that hierarchial re-probing of spotted samples can be achieved and this suggests that probes can be adapted to DNA microchips. Preliminary field results for a hand-held DNA microchip reader are presented. This work was supported by the German BMBF TEPS 03F0161 and the EU AIMS MAS3-CT97-0080 and EU DETAL Q5RS-2000-30778 projects. [source] ULTRASTRUCTURAL STUDIES ON BIGELOWIELLA NATANS, GEN.JOURNAL OF PHYCOLOGY, Issue 4 2001ET SP. Three isolates from the Provasoli-Guillard National Center for Culture of Marine Phytoplankton at Bigelow Laboratory, previously labeled Pedinomonas sp. and Pedinomonas minutissima from the green algal class Pedinophyceae, have been examined by light microscopy and TEM and shown to belong to the Chlorarachniophyceae, a class of nucleomorph-containing amebae. The three isolates represent the first chlorarachniophycean flagellates to be discovered. The ultrastructure of the cells has been examined in detail, with particular emphasis on the flagellar apparatus, a feature not examined in detail in chlorarachniophytes before. Cells are basically biflagellate, but the second flagellum is represented by a very short basal body only. Flagellar replication has shown this flagellum to be the mature stage, that is, the no. 1 flagellum, whereas the long emergent flagellum is the no. 2 flagellum that shortens into a short basal body during cell division. Mitosis is open with a pair of centrioles at each pole. Emergent flagella are absent during mitosis. Cells may form cysts, and the flagellar basal bodies and part of the flagellar roots are maintained in the cysts. Four microtubular roots emanate from the basal bodies, and the path of one of them is very unusual and very unlike any other known flagellate. No striated roots were observed. Other fine-structural features of the cell include a very unusual type of pyrenoid and a special type of extrusome. Cells are mixotrophic. The three isolates are very similar and are described as Bigelowiella natans, gen. et sp. nov. Ultrastructurally, chlorarachniophytes do not show close relationship to any known group of algae or other protists. [source] Impact of Solar Ultraviolet Radiation on Marine Phytoplankton of Patagonia, Argentina,PHOTOCHEMISTRY & PHOTOBIOLOGY, Issue 4 2005E. Walter Helbling ABSTRACT Patagonia area is located in close proximity to the Antarctic ozone "hole" and thus receives enhanced ultraviolet B (UV-B) radiation (280,315 nm) in addition to the normal levels of ultraviolet A (UV-A; 315,400 nm) and photosynthetically available radiation (PAR; 400-700 nm). In marine ecosystems of Patagonia, normal ultraviolet radiation (UVR) levels affect phytoplankton assemblages during the three phases of the annual succession: (1) prebloom season (late summer-fall), (2) bloom season (winter-early spring) and (3) postbloom season (late spring-summer). Small-size cells characterize the pre-and postbloom communities, which have a relatively high photosynthetic inhibition because of high UVR levels during those seasons. During the bloom, characterized by micro-plankton diatoms, photosynthetic inhibition is low because of the low UVR levels reaching the earth's surface during winter; this community, however, is more sensitive to UV-B when inhibition is normalized by irradiance (i.e. biological weighting functions). In situ studies have shown that UVR significantly affects not only photosynthesis but also the DNA molecule, but these negative effects are rapidly reduced in the water column because of the differential attenuation of solar radiation. UVR also affects photosynthesis versus irradiance (P vs E) parameters of some natural phytoplankton assemblages (i.e. during the pre- but not during the postbloom season). However, there is a significant temporal variability of P vs E parameters, which are influenced by the nutrient status of cells and taxonomic composition; taxonomic composition is in turn associated with the stratification conditions (e.g. wind speed and duration). In Patagonia, wind speed is one of the most important variables that conditions the development of the winter bloom by regulating the depth of the upper mixed layer (UML) and hence the mean irradiance received by cells. Studies on the interactive effects of UVR and mixing show that responses of phytoplankton vary according to the taxonomic composition and cell structure of assemblages; therefore cells use UVR if >90% of the euphotic zone is being mixed. In fact, cell size plays a very important role when estimating the impact of UVR on phytoplankton, with large cells being more sensitive when determining photosynthesis inhibition, whereas small cells are more sensitive to DNA damage. Finally, in long-term experiments, it was determined that UVR can shape the diatom community structure in some assemblages of coastal waters, but it is virtually unknown how these changes affect the trophody-namics of marine systems. Future studies should consider the combined effects of UVR on both phytoplankton and grazers to establish potential changes in biodiversity of the area. [source] Comparison by PAM Fluorometry of Photosynthetic Activity of Nine Marine Phytoplankton Grown Under Identical Conditions,PHOTOCHEMISTRY & PHOTOBIOLOGY, Issue 3 2005P. Juneau ABSTRACT The photosynthetic activity of marine phytoplankton from five algal classes (Phaeodactylum tricornutum, Skeletonema costatum, Thalassiosira oceanica, Thalassiosira weissflogii, Dunaliella tertiolecta, Mantoniella squamata, Emiliania huxleyi, Pavlova lutheri and Heterosigma akashiwo) was investigated under identical growth conditions to determine interspecies differences. Primary photochemistry and electron transport capacity of individual species were examined by pulse amplitude-modulated (PAM) fluorescence. Although few differences were found in maximal photosystem II (PSII) photochemical efficiency between various species, large differences were noticed in their PSII-photosystem I (PSI) electron transport activity. We found that species such as T. oceanica and M. squamata have much lower photochemical activity than H. akashiwo. It appeared that processes involved in electron transport activity were more susceptible to change during algal evolution compared with the primary photochemical act close to PSII. Large variations in the nonphotochemical energy dissipation event among species were also observed. Light energy required to saturate photosynthesis was very different between species. We have shown that M. squamata and H. akashiwo required higher light energy (>1300 ,mol m,2 s,1) to saturate photosynthesis compared with S. costatum and E. huxleyi (ca 280 ,mol m,2 s,1). These differences were interpreted to be the result of variations in the size of lightharvesting complexes associated with PSII. These disparities in photosynthetic activity might modulate algal community structure in the natural environment where light energy is highly variable. Our results suggest that for an accurate evaluation of primary productivity from fluorescence measurements, it is essential to know the species composition of the algal community and the individual photosynthetic capacity related to the major phytoplankton species present in the natural phytoplankton assemblage. [source] METABOLIC AND ECOLOGICAL CONSTRAINTS IMPOSED BY SIMILAR RATES OF AMMONIUM AND NITRATE UPTAKE PER UNIT SURFACE AREA AT LOW SUBSTRATE CONCENTRATIONS IN MARINE PHYTOPLANKTON AND MACROALGAE,JOURNAL OF PHYCOLOGY, Issue 2 2007T. Alwyn Marine phytoplankton and macroalgae acquire important resources, such as inorganic nitrogen, from the surrounding seawater by uptake across their entire surface area. Rates of ammonium and nitrate uptake per unit surface area were remarkably similar for both marine phytoplankton and macroalgae at low external concentrations. At an external concentration of 1 ,M, the mean rate of nitrogen uptake was 10±2 nmol·cm,2·h,1 (n=36). There was a strong negative relationship between log surface area:volume (SA:V) quotient and log nitrogen content per cm2 of surface (slope=,0.77), but a positive relationship between log SA:V and log maximum specific growth rate (,max; slope=0.46). There was a strong negative relationship between log SA:V and log measured rate of ammonium assimilation per cm2 of surface, but the slope (,0.49) was steeper than that required to sustain ,max (,0.31). Calculated rates of ammonium assimilation required to sustain growth rates measured in natural populations were similar for both marine phytoplankton and macroalgae with an overall mean of 6.2±1.4 nmol·cm,2·h,1 (n=15). These values were similar to maximum rates of ammonium assimilation in phytoplankton with high SA:V, but the values for algae with low SA:V were substantially less than the maximum rate of ammonium assimilation. This suggests that the growth rates of both marine phytoplankton and macroalgae in nature are often constrained by rates of uptake and assimilation of nutrients per cm2 surface area. [source] Integrating physiological, ecological and evolutionary change: a Price equation approachECOLOGY LETTERS, Issue 8 2009Sinéad Collins Abstract We use a general quantitative framework , the Price equation , to partition phenotypic responses to environmental change into separate physiological, evolutionary and ecological components. We demonstrate how these responses, which potentially occur over different timescales and are usually studied in isolation, can be combined in an additive way; and we discuss the main advantages of doing this. We illustrate our approach using two worked examples, concerning the emergence of toxin resistance within microbial communities, and the estimation of carbon uptake by marine phytoplankton in high-CO2 environments. We find that this approach allows us to exclude particular mechanistic hypotheses with regard to community-level transformations, and to identify specific instances where appropriate data are lacking. Thus Price's equation provides not only a powerful conceptual aid, but also a means for testing hypotheses and for directing empirical research programmes. [source] Allometric scaling of maximum population density: a common rule for marine phytoplankton and terrestrial plantsECOLOGY LETTERS, Issue 5 2002Andrea Belgrano A primary goal of macroecology is to identify principles that apply across varied ecosystems and taxonomic groups. Here we show that the allometric relationship observed between maximum abundance and body size for terrestrial plants can be extended to predict maximum population densities of marine phytoplankton. These results imply that the abundance of primary producers is similarly constrained in terrestrial and marine systems by rates of energy supply as dictated by a common allometric scaling law. They also highlight the existence of general mechanisms linking rates of individual metabolism to emergent properties of ecosystems. [source] Diversity of the cadmium-containing carbonic anhydrase in marine diatoms and natural watersENVIRONMENTAL MICROBIOLOGY, Issue 2 2007Haewon Park Summary A recent report of a novel carbonic anhydrase (CDCA1) with Cd as its metal centre in the coastal diatom Thalassiosira weissflogii has led us to search for the occurrence of this Cd enzyme (CDCA) in other marine phytoplankton and in the environment. Using degenerate primers designed from the published sequences from T. weissflogii and a putative sequence in the genome of Thalassiosira pseudonana, we show that CDCA is widespread in diatom species and ubiquitous in the environment. All detected genes share more than 64% amino acid identity with the CDCA of T. pseudonana. Analysis of the amino acid sequence of CDCA shows that the putative Cd binding site resembles that of beta-class carbonic anhydrases (CAs). The prevalence of CAs in diatoms that presumably contain Cd at their active site probably reflects the very low concentration of Zn in the marine environment and the difficulty in acquiring inorganic carbon for photosynthesis. The cdca primers developed in this study should be useful for detecting cdca genes in the field, and studying the conditions under which they are expressed. [source] Bioconcentration of persistent organic pollutants in four species of marine phytoplanktonENVIRONMENTAL TOXICOLOGY & CHEMISTRY, Issue 11 2005Antje Gerofke Abstract The uptake of polychlorinated biphenyls (PCBs) was studied in four species of marine algae. A novel experimental system to establish and maintain constant dissolved concentrations of PCBs was employed. Headspace sampling was used to verify that the freely dissolved concentrations remained constant with time. The headspace analysis also allowed sorption to dissolved organic carbon (DOC) to be quantified for all but the most lipophilic PCB congeners. Equilibration with the dissolved phase was rapid for three of the four algae species (<1 d for the majority of congeners). Organic carbon,normalized algae/water partition coefficients (KAlgW) were similar for three of the four species, but were lower by a factor of 10 to 20 for Phaeodactylum tricornutum. The KAlgW values of the first three species were similar to the octanol/water partition coefficient (KOW) for those PCB congeners for which DOC sorption could be quantified. These KAlgW values also agreed well with organic carbon,normalized bioconcentration factors for PCBs in suspended particulate matter (BCFSPM) sampled in Baltic Sea surface water during the summer. [source] Comparison of Cd, Cu, and Zn toxic effects on four marine phytoplankton by pulse-amplitude-modulated fluorometryENVIRONMENTAL TOXICOLOGY & CHEMISTRY, Issue 10 2005Ai-Jun Miao Abstract The toxic effects of Cd, Cu, and Zn on four different marine phytoplankton, Dunaliella tertiolecta, Prorocentrum minimum, Synechococcus sp., and Thalassiosira weissflogii, were examined by comparing the cell-specific growth rate, pulse-amplitude-modulated (PAM) parameters (maximum photosystem II quantum yield ,M and operational quantum yield ,'M), chlorophyll a content, and cellular metal concentration, over a 96-h period. The calculated no-observed-effect concentration (NOEC) based on both cell-specific growth rate and two PAM parameters (,M and ,'M) were mostly identical. Thus, these PAM parameters and cell-specific growth rate were comparable in their sensitivities as the biomarkers for trace metal toxicity to marine phytoplankton. The cyanobacteria Synechococcus sp. was the most sensitive species among the four algal species tested because of its higher cell surface to volume ratio. The toxicity of the three tested metals followed the order of Cd > Cu > Zn based on the cellular metal concentration of the four algae at the NOEC. The cellular metal bioaccumulation followed the same Freundlich isotherm for each metal regardless of the algal species, indicating that the metal accumulation was a nonmetabolic process under high ambient metal concentrations and that the cell surface metal binding was comparable among the different species. For all the algae examined in our study, the bioaccumulation potentials of Cu and Zn were similar to each other, while the Cd bioaccumulation was much lower under environmentally realistic metal concentration. [source] A PERSPECTIVE ON PHOTOSYNTHESIS IN THE OLIGOTROPHIC OCEANS: HYPOTHESES CONCERNING ALTERNATE ROUTES OF ELECTRON FLOW,JOURNAL OF PHYCOLOGY, Issue 4 2010Arthur R. Grossman Many regions of the open, oligotrophic oceans are depleted of nutrients, especially nitrogen and iron. The biogenesis and the functioning of the photosynthetic apparatus may be specialized and tailored to the various marine habitats. In this minireview, we discuss some new findings with respect to photosynthetic processes in the oceans. We focus on findings that suggest that some cyanobacteria may route electrons derived from the splitting of H2O to the reduction of O2 and H+ in a water-to-water cycle, and that other cyanobacteria that fix nitrogen during the day are likely missing PSII and enzymes involved in the fixation of inorganic carbon. Both of these proposed "variant" forms of photosynthetic electron flow provide new insights into ways in which marine phytoplankton satisfy their energetic and nutritive requirements. [source] ESTABLISHMENT OF MINIMAL AND MAXIMAL TRANSCRIPT LEVELS FOR NITRATE TRANSPORTER GENES FOR DETECTING NITROGEN DEFICIENCY IN THE MARINE PHYTOPLANKTON ISOCHRYSIS GALBANA (PRYMNESIOPHYCEAE) AND THALASSIOSIRA PSEUDONANA (BACILLARIOPHYCEAE),JOURNAL OF PHYCOLOGY, Issue 4 2009Lee-Kuo Kang Nitrate transporter genes (Nrt2) encode high-affinity nitrate transporters in marine phytoplankton, and their transcript levels are potential markers of nitrogen deficiency in eukaryotic phytoplankton. For the proper interpretation of measured Nrt2 transcript abundances, a relative expression assay was proposed and tested in Isochrysis galbana Parke (Prymnesiophyceae) and Thalassiosira pseudonana (Hust.) Hasle et Heimdal (Bacillariophyceae). The minimal transcript levels of Nrt2 genes were achieved by the addition of 100 ,M ammonium, which led to a rapid decline in Nrt2 transcripts in 10,30 min. Experiments using a concentration series revealed that the effective dosage of ammonium to create a minimal transcript level of ,1 ,mol · mol,1 18S rRNA was ,25 ,M in both species. On the other hand, the addition of l -methionine sulfoximine (MSX), an inhibitor of glutamine synthetase, enhanced the Nrt2 transcript level in I. galbana but did not affect that in T. pseudonana. Nitrogen deprivation was used as an alternative means to create maximal Nrt2 transcript levels. By transferring cells into N-free medium for 24 h, Nrt2 transcript levels increased to ,90 ,mol · mol,1 18S rRNA in I. galbana, and to ,800 ,mol · mol,1 18S rRNA in T. pseudonana. The degree of nitrogen deficiency thus can be determined by comparing original Nrt2 transcript levels with the minimal and maximal levels. [source] METABOLIC AND ECOLOGICAL CONSTRAINTS IMPOSED BY SIMILAR RATES OF AMMONIUM AND NITRATE UPTAKE PER UNIT SURFACE AREA AT LOW SUBSTRATE CONCENTRATIONS IN MARINE PHYTOPLANKTON AND MACROALGAE,JOURNAL OF PHYCOLOGY, Issue 2 2007T. Alwyn Marine phytoplankton and macroalgae acquire important resources, such as inorganic nitrogen, from the surrounding seawater by uptake across their entire surface area. Rates of ammonium and nitrate uptake per unit surface area were remarkably similar for both marine phytoplankton and macroalgae at low external concentrations. At an external concentration of 1 ,M, the mean rate of nitrogen uptake was 10±2 nmol·cm,2·h,1 (n=36). There was a strong negative relationship between log surface area:volume (SA:V) quotient and log nitrogen content per cm2 of surface (slope=,0.77), but a positive relationship between log SA:V and log maximum specific growth rate (,max; slope=0.46). There was a strong negative relationship between log SA:V and log measured rate of ammonium assimilation per cm2 of surface, but the slope (,0.49) was steeper than that required to sustain ,max (,0.31). Calculated rates of ammonium assimilation required to sustain growth rates measured in natural populations were similar for both marine phytoplankton and macroalgae with an overall mean of 6.2±1.4 nmol·cm,2·h,1 (n=15). These values were similar to maximum rates of ammonium assimilation in phytoplankton with high SA:V, but the values for algae with low SA:V were substantially less than the maximum rate of ammonium assimilation. This suggests that the growth rates of both marine phytoplankton and macroalgae in nature are often constrained by rates of uptake and assimilation of nutrients per cm2 surface area. [source] PRODUCTION OF PHYTOCHELATINS AND GLUTATHIONE BY MARINE PHYTOPLANKTON IN RESPONSE TO METAL STRESS,JOURNAL OF PHYCOLOGY, Issue 5 2006Silvia K. Kawakami Phytoplankton deal with metal toxicity using a variety of biochemical strategies. One of the strategies involves glutathione (GSH) and phytochelatins (PCs), which are metal-binding thiol peptides produced by eukaryotes and these compounds have been related to several intracellular functions, including metal detoxification, homeostasis, metal resistance and protection against oxidative stress. This paper assesses our state of knowledge on the production of PCs and GSH by marine phytoplankton in laboratory and field conditions and the possible applications of PCs for environmental purposes. Good relationships have been observed between metal exposure and PC production in phytoplankton in the laboratory with Cd, Pb, and Zn showing the greatest efficacy, thereby indicating that PCs have a potential for application as a biomarker. Fewer studies on PC distributions in particulate material have been undertaken in the field. These studies show that free Cu has a strong relationship with the levels of PC in the particulate material. The reason for this could be because Cu is a common contaminant in coastal waters. However it could also be due to the lack of measurements of other metals and their speciation. GSH shows a more complex relationship to metal levels both in the laboratory and in the field. This is most likely due to its multifunctionality. However, there is evidence that phytoplankton act as an important source of dissolved GSH in marine waters, which may form part of the strong organic ligands that control metal speciation, and hence metal toxicity. [source] 132 Parasites and Phytoplankton, with a Special Emphasis on Dinoflagellate InfectionsJOURNAL OF PHYCOLOGY, Issue 2003M. G. Park Eukaryotic parasites are believed to play important roles in phytoplankton ecology and particularly in bloom dynamics of red-tide dinoflagellates. Apart from the prokaryotic parasites such as viruses and bacteria, certain flagellates and fungi have received some degree of attention as eukaryotic parasites of phytoplankton. Our understanding of fungal parasites is largely based on studies for freshwater diatoms and dinoflagellates, although fungal infections are known for some marine phytoplankton, including diatoms. By comparison, the dinoflagellate genus Amoebophrya and the newly described Perkinsozoa Pavilucifera infectans are widely distributed in coastal waters of the world and are well known as eukaryotic parasites of dinoflagellates. Recent work indicates that these parasites have significant impacts on the ecophysiology and behavior of dinoflagellate hosts. Thus, the ecological roles of Amoebophrya spp. and Pavilucifera infectans should be carefully considered in developing concepts about plankton dynamics and material flows in marine food webs. [source] rRNA PROBES FOR IDENTIFICATION AND CHARACTERIZATION OF MARINE PHYTOPLANKTON: THEIR POTENTIAL APPLICATION FOR DNA MICROCHIPSJOURNAL OF PHYCOLOGY, Issue 2001Article first published online: 24 SEP 200 Groben R., Lange, M. & Medlin, L. K. Alfred Wegener Institute for Polar and Marine Research, Am Handelshafen 12, D-27570 Bremerhaven, Germany A fast and reliable identification of nano- and picoplankton by light microscopy is often difficult because of the lack of usable morphological characteristics, whereas electron microscopy and biochemical methods are very time consuming. Identification of toxic algae also requires a great deal of taxonomic experrtise so that false positives are not recorded. One solution is to use taxon specific rRNA probes. For this purpose we designed probes for phytoplankton taxa, including toxic algae. These probes were either labelled with Digoxigenin (DIG) and used in DNA dot blot experiments, or labelled with fluorochromes and used in whole-cell hybridisations with fluorescence microscopy or flow cytometric detection. Specific probes could be used over a broad taxonomic range from higher groups (i.e. the class of dinoflagellates) to species level (i.e. Prorocentrum lima). These probes were be used in the EU MAST project AIMS for the development of an automated identification system for marine phytoplankton in combination with flow cytometry and artificial neural networks (ANNs), in the EU MAST DETAL and in the German national project (TEPS) for the development of an early warning system for harmful algal blooms. Results using Digoxigenin (DIG)-labelled probes on picoplankton samples taken from several water bodies indicate that hierarchial re-probing of spotted samples can be achieved and this suggests that probes can be adapted to DNA microchips. Preliminary field results for a hand-held DNA microchip reader are presented. This work was supported by the German BMBF TEPS 03F0161 and the EU AIMS MAS3-CT97-0080 and EU DETAL Q5RS-2000-30778 projects. [source] Comparison by PAM Fluorometry of Photosynthetic Activity of Nine Marine Phytoplankton Grown Under Identical Conditions,PHOTOCHEMISTRY & PHOTOBIOLOGY, Issue 3 2005P. Juneau ABSTRACT The photosynthetic activity of marine phytoplankton from five algal classes (Phaeodactylum tricornutum, Skeletonema costatum, Thalassiosira oceanica, Thalassiosira weissflogii, Dunaliella tertiolecta, Mantoniella squamata, Emiliania huxleyi, Pavlova lutheri and Heterosigma akashiwo) was investigated under identical growth conditions to determine interspecies differences. Primary photochemistry and electron transport capacity of individual species were examined by pulse amplitude-modulated (PAM) fluorescence. Although few differences were found in maximal photosystem II (PSII) photochemical efficiency between various species, large differences were noticed in their PSII-photosystem I (PSI) electron transport activity. We found that species such as T. oceanica and M. squamata have much lower photochemical activity than H. akashiwo. It appeared that processes involved in electron transport activity were more susceptible to change during algal evolution compared with the primary photochemical act close to PSII. Large variations in the nonphotochemical energy dissipation event among species were also observed. Light energy required to saturate photosynthesis was very different between species. We have shown that M. squamata and H. akashiwo required higher light energy (>1300 ,mol m,2 s,1) to saturate photosynthesis compared with S. costatum and E. huxleyi (ca 280 ,mol m,2 s,1). These differences were interpreted to be the result of variations in the size of lightharvesting complexes associated with PSII. These disparities in photosynthetic activity might modulate algal community structure in the natural environment where light energy is highly variable. Our results suggest that for an accurate evaluation of primary productivity from fluorescence measurements, it is essential to know the species composition of the algal community and the individual photosynthetic capacity related to the major phytoplankton species present in the natural phytoplankton assemblage. [source] The recently established diatom Coscinodiscus wailesii (Coscinodiscales, Bacillariophyta) in Brazilian waters.PHYCOLOGICAL RESEARCH, Issue 2 2001I: Remarks on morphology, distribution SUMMARY Coscinodiscus wailesii Gran et Angst is a large centric diatom (280,500 ,m diameter) from marine phytoplankton, characterized by a cylindrical frustule with flat valvar surface, two marginal rings of rimoportulae on the mantle, and two macrorimoportulae. Cells from cultured and natural populations collected in Paranaguá Bay, Paraná, southern Brazil were observed under light and scanning electron microscopes to verify the populations' correct identity and morphology. In both populations, a typical central rosette or a hyaline area was found in the valvar center. The species' distribution in Brazilian waters was revised, and a discussion on possible vectors of transport was made. Blooms of the species occur sporadically in the coast of Paraná, seeming to affect the local trophic chain. [source] |