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Largest Fraction (largest + fraction)
Selected AbstractsDiversity of endophytic bacterial communities in poplar grown under field conditionsFEMS MICROBIOLOGY ECOLOGY, Issue 2 2008Kristina Ulrich Abstract Bacterial endophytes may be important for plant health and other ecologically relevant functions of poplar trees. The composition of endophytic bacteria colonizing the aerial parts of poplar was studied using a multiphasic approach. The terminal restriction fragment length polymorphism analysis of 16S rRNA genes demonstrated the impact of different hybrid poplar clones on the endophytic community structure. Detailed analysis of endophytic bacteria using cultivation methods in combination with cloning of 16S rRNA genes amplified from plant tissue revealed a high phylogenetic diversity of endophytic bacteria with a total of 53 taxa at the genus level that included Proteobacteria, Actinobacteria, Firmicutes and Bacteroidetes. The community structure displayed clear differences in terms of the presence and relative proportions of bacterial taxa between the four poplar clones studied. The results showed that the genetic background of the hybrid poplar clones corresponded well with the endophytic community structure. Out of the 513 isolates and 209 clones identified, Actinobacteria, in particular the family Microbacteriaceae, made up the largest fraction of the isolates, whereas the clone library was dominated by Alpha - and Betaproteobacteria. The most abundant genera among the isolates were Pseudomonas and Curtobacterium, while Sphingomonas prevailed among the clones. [source] Sediment phosphorus characteristics in the clearwater state of Lake Mogan, TurkeyLAKES & RESERVOIRS: RESEARCH AND MANAGEMENT, Issue 3 2008Serap Pulatsü Abstract This study examined the vertical distributions of total phosphorus (TP) and phosphorus fractions, and the iron and organic matter, in the littoral sediment in a macrophyte-dominated, clearwater state in Lake Mogan between September 2005 and August 2006. Benthic macroinvertebrates and total bacteria in the sediment also were determined. No clear seasonal or depth-related (0,20 cm) patterns were found in sediment concentrations for the measured parameters. The phosphorus release was quantitatively very low, and a negative phosphorus release (,0.132 µg m,2 day,1) was measured during the summer months. The TP concentrations of the sediment samples ranged between 675.00 and 1463.80 µg g,1 dry weight (DW), and the trophic level of the lake was eutrophic. On average, inorganic phosphorus fractions comprised the largest fraction (63%), while organic-bound phosphorus (Org , P) constituted 37% of the TP in Lake Mogan. The most important phosphorus-immobilizing factors are high iron content (14 200,47 750 µg g,1 DW), the sediment's clay content (47.80,51.80%), and an abundance of macrophytes at the sampling station. The low abundance of benthic macroinvertebrates (510,850 individuals m,2), which depend on sediments with high iron and low organic matter (5.42,13.30%), played a role in the sediment phosphorus retention. Although bacterial abundance in the surficial sediment appeared to be positively correlated to temperature, the overlying water did not experience anoxic conditions, supporting a state in which bacteria were able to retain phosphorus in their cell structures. Long-term changes in the sediments of Lake Mogan must be monitored lake. In order to optimize the management of the lake, and to determine the longevity of a clearwater state following management measures and continued external phosphorus loading, long-term changes in the sediments of Lake Morgan must be monitored. [source] PAR and UV Effects on Vertical Migration and Photosynthesis in Euglena gracilis,PHOTOCHEMISTRY & PHOTOBIOLOGY, Issue 4 2007Peter Richter Recently it was shown that the unicellular flagellate Euglena gracilis changes the sign of gravitaxis from negative to positive upon excessive radiation. This sign change persists in a cell culture for hours even if subsequently transferred to dim light. To test the ecological relevance of this behavior, a vertical column experiment was performed (max. depth 65 cm) to test distribution, photosynthetic efficiency and motility in different horizons of the column (surface, 20, 40 and 65 cm). One column was covered with a UV cut-off filter, which transmits photosynthetically active radiation (PAR) only, the other with a filter which transmits PAR and UV. The columns were irradiated with a solar simulator (PAR 162 W m,2, UV-A 32.6 W m,2, UV-B 1.9 W m,2). The experiment was conducted for 10 days, normally with a light/dim light cycle of 12 h:12 h, but in some cases the light regime was changed (dim light instead of full radiation). Under irradiation the largest fraction of cells was found at the bottom of the column. The cell density decreased toward the surface. Photosynthetic efficiency, determined with a pulse amplitude modulated fluorometer, was negligible at the surface and increased toward the bottom. While the cell suspension showed a positive gravitaxis at the bottom, the cells in the 40 cm horizon were bimodally oriented (about the same percentage of cells swimming upward and downward, respectively). At 20 cm and at the surface the cells showed negative gravitaxis. Positive gravitaxis was more pronounced in the UV + PAR samples. At the surface and in the 20 and 40 cm horizons photosynthetic efficiency was better in the PAR-only samples than in the PAR + UV samples. At the bottom photosynthetic efficiency was similar in both light treatments. The data suggest that high light reverses gravitaxis of the cells, so that they move downward in the water column. At the bottom the light intensity is lower (attenuation of the water column and self shading of the cells) and the cells recover. After recovery the cells swim upward again until the negative gravitaxis is reversed again. [source] Preliminary investigations on the effects of dietary lipid on the spawning performance and egg quality of black sea bass Centropristis striata LAQUACULTURE RESEARCH, Issue 16 2009Christopher D Bentley Abstract Adult black sea bass Centropristis striata broodstock (N=162) were fed three different dietary treatments: two commercially prepared diets with 45% protein and two different lipid levels (12% and 20%) (diets 1 and 2), and a diet of frozen Atlantic silversides Menidia menidia (SS, diet 3). Broodstock were held under controlled photothermal conditions and induced to spawn with an LHRHa pellet (72 ,g kg,1 bw). Dietary lipid had pronounced effects on spawning performance and egg quality. Diet 3 (SS) produced a significantly (P<0.05) higher fertilization success (22.4%) than diets 1 (0.6%) and 2 (4.8%). The hatching success of fertilized eggs was similar in all diets (range=40,58.6%), but only two spawns from diet 1 (12% lipid) yielded viable yolk-sac larvae (YSL). Diet 3 (SS) also produced significantly more YSL per female (21.8 × 103) than the diet 1 (0.3 × 103). Eggs from diet 3 (SS) contained a significantly greater proportion of n-3 series fatty acids, with docosahexaenoic acid (DHA) as the largest fraction. Eggs from commercially prepared dietary treatments contained significantly more n-6 fatty acids. The poor spawning performance of fish fed diet 1 (12% lipid) may be related to higher levels of linoleic acid and lower levels of DHA in the diet. [source] | |||||||||||||