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Large Portion (large + portion)
Selected AbstractsMicrocystic Adnexal Carcinoma Involving a Large Portion of the Face: When Is Surgery Not Reasonable?DERMATOLOGIC SURGERY, Issue 11 2005Daniel Brian Eisen MD Background. We report a case of microcystic adnexal carcinoma (MAC) involving a large portion of the face, one of the largest of any MAC reported thus far in this area, and review the literature regarding the nature of the tumor and available treatments. We also review all of the reported cases of metastases and the possible role of radiation in the etiopathogenesis of this tumor. Objective. To review the literature about what is known about therapy for MAC and what options are available to patients who have this disease. Materials and Methods. Case report and review of the literature. Results. Of the 274 cases of MAC thus far reported, there are 6 cases of metastases, only 1 of which resulted in death. Conclusion. Mohs surgery should be the treatment of choice for this tumor; however, when extirpation entails sufficiently large morbidity, given the low rate of metastases and mortality, observation is a reasonable alternative. DANIEL BRIAN EISEN, MD, AND DAVID ZLOTY, MD, HAVE INDICATED NO SIGNIFICANT INTEREST WITH COMMERCIAL SUPPORTERS. [source] Persistence of Traumatic Memories in World War II Prisoners of WarJOURNAL OF AMERICAN GERIATRICS SOCIETY, Issue 12 2009(See editorial comments by Dr. Jules Rosen, 2347), on pp 234 OBJECTIVES: To assess the long-term effects of the prisoner of war (POW) experience on U.S. World War II (WWII) veterans. DESIGN: Exploratory study. SETTING: Participants were recruited through the Hines Veterans Affairs Hospital; a POW reunion in Orlando, Florida; and the WWII veterans periodical, "The QUAN." PARTICIPANTS: One hundred fifty-seven American military veterans who were former WWII POWs. MEASURMENTS: Participants completed a mailed survey describing their POW experiences, POW effects on subsequent psychological and physical well-being, and ways in which these experiences shaped major decisions in their lives. RESULTS: Participants from the European and Pacific theaters reported that their captivity during WWII affected their long-term emotional well-being. Both groups reported high rates of reflection, dreaming, and flashbacks pertaining to their POW experiences, but Pacific theater POWs did so at higher rates in the present than in the past. Large portions of both groups reported greater rumination on POW experiences after retirement. Finally, 16.6% of participants met the requirements of a current, clinical diagnosis of posttraumatic stress disorder (PTSD) based on the Mississippi PTSD scale, with PTSD rates in Pacific theater POWs (34%) three times those of European theater POWs (12%). CONCLUSION: Traumatic memories and clinical levels of PTSD persist for WWII POWs as long as 65 years after their captivity. Additionally, rumination about these experiences, including flashbacks and persistent nightmares, may increase after retirement, particularly for those held in the Pacific theater. These findings inform the current therapeutic needs of this elderly population and future generations of POWs from other military conflicts. [source] Out-of-Core and Dynamic Programming for Data Distribution on a Volume Visualization ClusterCOMPUTER GRAPHICS FORUM, Issue 1 2009S. Frank I.3.2 [Computer Graphics]: Distributed/network graphics; C.2.4 [Distributed Systems]: Distributed applications Abstract Ray directed volume-rendering algorithms are well suited for parallel implementation in a distributed cluster environment. For distributed ray casting, the scene must be partitioned between nodes for good load balancing, and a strict view-dependent priority order is required for image composition. In this paper, we define the load balanced network distribution (LBND) problem and map it to the NP-complete precedence constrained job-shop scheduling problem. We introduce a kd-tree solution and a dynamic programming solution. To process a massive data set, either a parallel or an out-of-core approach is required. Parallel preprocessing is performed by render nodes on data, which are allocated using a static data structure. Volumetric data sets often contain a large portion of voxels that will never be rendered, or empty space. Parallel preprocessing fails to take advantage of this. Our slab-projection slice, introduced in this paper, tracks empty space across consecutive slices of data to reduce the amount of data distributed and rendered. It is used to facilitate out-of-core bricking and kd-tree partitioning. Load balancing using each of our approaches is compared with traditional methods using several segmented regions of the Visible Korean data set. [source] Microcystic Adnexal Carcinoma Involving a Large Portion of the Face: When Is Surgery Not Reasonable?DERMATOLOGIC SURGERY, Issue 11 2005Daniel Brian Eisen MD Background. We report a case of microcystic adnexal carcinoma (MAC) involving a large portion of the face, one of the largest of any MAC reported thus far in this area, and review the literature regarding the nature of the tumor and available treatments. We also review all of the reported cases of metastases and the possible role of radiation in the etiopathogenesis of this tumor. Objective. To review the literature about what is known about therapy for MAC and what options are available to patients who have this disease. Materials and Methods. Case report and review of the literature. Results. Of the 274 cases of MAC thus far reported, there are 6 cases of metastases, only 1 of which resulted in death. Conclusion. Mohs surgery should be the treatment of choice for this tumor; however, when extirpation entails sufficiently large morbidity, given the low rate of metastases and mortality, observation is a reasonable alternative. DANIEL BRIAN EISEN, MD, AND DAVID ZLOTY, MD, HAVE INDICATED NO SIGNIFICANT INTEREST WITH COMMERCIAL SUPPORTERS. [source] Neuronal differentiation and long-term survival of newly generated cells in the olfactory midbrain of the adult spiny lobster, Panulirus argusDEVELOPMENTAL NEUROBIOLOGY, Issue 3 2001Manfred Schmidt Abstract The fate of continuously generated cells in the soma clusters of the olfactory midbrain of adult spiny lobsters, Panulirus argus, was investigated by in vivo pulse-chase experiments with the proliferation marker 5-bromo-2,-deoxyuridine (BrdU) combined with immunostainings for neuropeptides of mature neurons. A BrdU injection after a survival time (ST) of 14 h labeled about 100 nuclei in the lateral soma clusters (LC), comprised of projection neurons, and about 30 nuclei in the medial soma clusters (MC), comprised of local interneurons. The BrdU-positive nuclei were confined to small regions at the inside of these clusters, which also contain nuclei in different phases of mitosis and thus represent proliferative zones. After STs of 2 weeks or 3 months, the number of BrdU-positive nuclei was doubled, indicating a mitosis of all originally labeled cells. Dependent on ST, the BrdU-positive nuclei were translocated from the proliferative zones towards the outside of the clusters, where somata of mature neurons reside. Immunostainings with antibodies to the neuropeptides FMRFamide and substance P, both of which label a large portion of somata in the MC and a pair of giant neurons projecting into the LC, revealed that in both clusters the proliferative zones are surrounded by, but are themselves devoid of, labeling. In the MC, some BrdU-positive somata were double-labeled by the FMRFamide antibody after an ST of 3 months, and by the substance P antibody after STs of 6 and 11/14 months, but not after 3 months. In the LC, BrdU-positive somata after an ST of 3 months partially and after 6 and 11/14 months widely overlapped with the arborizations of the giant neurons, indicating the establishment of synaptic input. The experiments show that cells generated in proliferative zones in the LC and MC of adult spiny lobsters after a final mitosis differentiate into neurons within months, survive for at least 1 year, and are integrated into the circuitry of the olfactory midbrain. A new hypothesis about the mechanism of adult neurogenesis in the central olfactory pathway of decapod crustaceans is developed, linking it to neurogenesis during embryonic and larval development. © 2001 John Wiley & Sons, Inc. J Neurobiol 48: 181,203, 2001 [source] BIODIVERSITY RESEARCH: Conserving macroinvertebrate diversity in headwater streams: the importance of knowing the relative contributions of , and , diversityDIVERSITY AND DISTRIBUTIONS, Issue 5 2010Amber Clarke Abstract Aim, We investigated partitioning of aquatic macroinvertebrate diversity in eight headwater streams to determine the relative contributions of , and , diversity to , diversity, and the scale dependence of , and , components. Location, Great Dividing Range, Victoria, Australia. Methods, We used the method of Jost (Ecology, 2007, 88, 2427,2439) to partition , diversity into its , and , components. We undertook the analyses at both reach and catchment scales to explore whether inferences depended on scale of observation. Results, We hypothesized that , diversity would make a large contribution to the , diversity of macroinvertebrates in our dendritic riverine landscape, particularly at the larger spatial scale (among catchments) because of limited dispersal among sites and especially among catchments. However, reaches each had relatively high taxon richness and high , diversity, while , diversity made only a small contribution to , diversity at both the reach and catchment scales. Main conclusions, Dendritic riverine landscapes have been thought to generate high , diversity as a consequence of limited dispersal and high heterogeneity among individual streams, but this may not hold for all headwater stream systems. Here, , diversity was high and , diversity low, with individual headwater stream reaches each containing a large portion of , diversity. Thus, each stream could be considered to have low irreplaceability since losing the option to use one of these sites in a representative reserve network does not greatly diminish the options available for completing the reserve network. Where limited information on individual taxonomic distributions is available, or time and money for modelling approaches are limited, diversity partitioning may provide a useful ,first-cut' for obtaining information about the irreplaceability of individual streams or subcatchments when establishing representative freshwater reserves. [source] Prediction and validation of the potential global distribution of a problematic alien invasive species , the American bullfrogDIVERSITY AND DISTRIBUTIONS, Issue 4 2007Gentile Francesco Ficetola ABSTRACT Predicting the probability of successful establishment and invasion of alien species at global scale, by matching climatic and land use data, is a priority for the risk assessment. Both large- and local-scale factors contribute to the outcome of invasions, and should be integrated to improve the predictions. At global scale, we used climatic and land use layers to evaluate the habitat suitability for the American bullfrog Rana catesbeiana, a major invasive species that is among the causes of amphibian decline. Environmental models were built by using Maxent, a machine learning method. Then, we integrated global data with information on richness of native communities and hunting pressure collected at the local scale. Global-scale data allowed us to delineate the areas with the highest suitability for this species. Predicted suitability was significantly related to the invasiveness observed for bullfrog populations historically introduced in Europe, but did not explain a large portion of variability in invasion success. The integration of data at the global and local scales greatly improved the performance of models, and explained > 57% of the variance in introduction success: bullfrogs were more invasive in areas with high suitability and low hunting pressure over frogs. Our study identified the climatic factors entailing the risk of invasion by bullfrogs, and stresses the importance of the integration of biotic and abiotic data collected at different spatial scales, to evaluate the areas where monitoring and management efforts need to be focused. [source] Spread and current potential distribution of an alien grass, Eragrostis lehmanniana Nees, in the southwestern USA: comparing historical data and ecological niche modelsDIVERSITY AND DISTRIBUTIONS, Issue 5 2006Heather Schussman ABSTRACT The potential distribution of alien species in a novel habitat often is difficult to predict because factors limiting species distributions may be unique to the new locale. Eragrostis lehmanniana is a perennial grass purposely introduced from South Africa to Arizona, USA in the 1930s; by the 1980s, it had doubled its extent. Based on environmental characteristics associated with its introduced and native range, researchers believed that E. lehmanniana had reached the limits of its distribution by the early 1990s. We collected data on E. lehmanniana locations from various land management agencies throughout Arizona and western New Mexico and found new records that indicate that E. lehmanniana has continued to spread. Also, we employed two modelling techniques to determine the current potential distribution and to re-investigate several environmental variables related to distribution. Precipitation and temperature regimes similar to those indicated by past research were the most important variables influencing model output. The potential distribution of E. lehmanniana mapped by both models was 71,843 km2 and covers a large portion of southeastern and central Arizona. Logistic regression (LR) predicted a potential distribution of E. lehmanniana more similar to this species current distribution than GARP based on average temperature, precipitation, and grassland species composition and recorded occurrences. Results of a cross-validation assessment and extrinsic testing showed that the LR model performed as well or better than GARP based on sensitivity, specificity, and kappa indices. [source] The unseen majority: soil microbes as drivers of plant diversity and productivity in terrestrial ecosystemsECOLOGY LETTERS, Issue 3 2008Marcel G. A. Van Der Heijden Abstract Microbes are the unseen majority in soil and comprise a large portion of life's genetic diversity. Despite their abundance, the impact of soil microbes on ecosystem processes is still poorly understood. Here we explore the various roles that soil microbes play in terrestrial ecosystems with special emphasis on their contribution to plant productivity and diversity. Soil microbes are important regulators of plant productivity, especially in nutrient poor ecosystems where plant symbionts are responsible for the acquisition of limiting nutrients. Mycorrhizal fungi and nitrogen-fixing bacteria are responsible for c. 5,20% (grassland and savannah) to 80% (temperate and boreal forests) of all nitrogen, and up to 75% of phosphorus, that is acquired by plants annually. Free-living microbes also strongly regulate plant productivity, through the mineralization of, and competition for, nutrients that sustain plant productivity. Soil microbes, including microbial pathogens, are also important regulators of plant community dynamics and plant diversity, determining plant abundance and, in some cases, facilitating invasion by exotic plants. Conservative estimates suggest that c. 20 000 plant species are completely dependent on microbial symbionts for growth and survival pointing to the importance of soil microbes as regulators of plant species richness on Earth. Overall, this review shows that soil microbes must be considered as important drivers of plant diversity and productivity in terrestrial ecosystems. [source] Relative influences of catchment- and reach-scale abiotic factors on freshwater fish communities in rivers of northeastern MesoamericaECOLOGY OF FRESHWATER FISH, Issue 3 2010P. C. Esselman Esselman PC, Allan JD. Relative influences of catchment- and reach-scale abiotic factors on freshwater fish communities in rivers of northeastern Mesoamerica. Ecology of Freshwater Fish 2010: 19: 439,454. © 2010 John Wiley & Sons A/S Abstract,,, While the abiotic factors important to freshwater fish assemblages at a reach scale are well understood, studies of larger scale constraints have yielded variable conclusions, spurring a need for further studies in new biogeographic contexts. This study investigated the importance of catchment- and reach-scale abiotic factors to variation in freshwater fish assemblages in rivers of northeastern Mesoamerica. Abiotic variables and fish data from 72 sampling sites on main stem rivers of Belize were used with partial constrained ordination to determine the proportion of spatially structured and unstructured variation in fish presence and absence, relative abundance, and community metrics explained by catchment- and reach-scale environmental factors. Results showed that, combined, catchment and reach variables explained a large portion of the total variation in the fish assemblage data (54,75%), and that catchment environment explained a greater portion of variation (42,63%) than reach environment (34,50%). Variables representing landscape position (local elevation, watershed area) and their reach-level correlates (channel width, depth variation, and substrate) correlated strongly to the fish assemblage data. Our results suggest that landscape-scale factors have a stronger relative influence on assemblages than environmental conditions at the reach scale within our study area. These results contrast with past findings that showed greater local scale influence in landscapes with low anthropogenic disturbance levels. Our findings suggest that biodiversity conservation efforts should consider assemblage variation across a longitudinal gradient, and that a multi-catchment region is a biologically relevant scale for fish conservation planning and coordination in northeastern Mesoamerica. [source] The individual tolerance concept is not the sole explanation for the probit dose-effect model,ENVIRONMENTAL TOXICOLOGY & CHEMISTRY, Issue 2 2000Michael C. Newman Abstract Predominant methods for analyzing dose- or concentration-effect data (i.e., probit analysis) are based on the concept of individual tolerance or individual effective dose (IED, the smallest characteristic dose needed to kill an individual). An alternative explanation (stochasticity hypothesis) is that individuals do not have unique tolerances: death results from stochastic processes occurring similarly in all individuals. These opposing hypotheses were tested with two types of experiments. First, time to stupefaction (TTS) was measured for zebra fish (Brachydanio rerio) exposed to benzocaine. The same 40 fish were exposed during five trials to test if the same order for TTS was maintained among trials. The IED hypothesis was supported with a minor stochastic component being present. Second, eastern mosquitofish (Gambusia holbrooki) were exposed to sublethal or lethal NaCl concentrations until a large portion of the lethally exposed fish died. After sufficient time for recovery, fish sublethally exposed and fish surviving lethal exposure were exposed simultaneously to lethal NaCl concentrations. No statistically significant effect was found of previous exposure on survival time but a large stochastic component to the survival dynamics was obvious. Repetition of this second type of test with pentachlorophenol also provided no support for the IED hypothesis. We conclude that neither hypothesis alone was the sole or dominant explanation for the lognormal (probit) model. Determination of the correct explanation (IED or stochastic) or the relative contributions of each is crucial to predicting consequences to populations after repeated or chronic exposures to any particular toxicant. [source] THE ROLE OF NATURAL ENEMIES IN THE EXPRESSION AND EVOLUTION OF MIXED MATING IN HERMAPHRODITIC PLANTS AND ANIMALSEVOLUTION, Issue 9 2007Janette A. Steets Although a large portion of plant and animal species exhibit intermediate levels of outcrossing, the factors that maintain this wealth of variation are not well understood. Natural enemies are one relatively understudied ecological factor that may influence the evolutionary stability of mixed mating. In this paper, we aim for a conceptual unification of the role of enemies in mating system expression and evolution in both hermaphroditic animals and plants. We review current theory and detail the potential effects of enemies on fundamental mating system parameters. In doing so, we identify situations in which consideration of enemies alters expectations about the stability of mixed mating. Generally, we find that inclusion of the enemy dimension may broaden conditions in which mixed mating systems are evolutionarily stable. Finally, we highlight avenues ripe for future theoretical and empirical work that will advance our understanding of enemies in the expression and evolution of mixed mating in their hosts/victims, including examination of feedback cycles between victims and enemies and quantification of mating system-related parameters in victim populations in the presence and absence of enemies. [source] Shifts in leaf N : P ratio during resorption reflect soil P in temperate rainforestFUNCTIONAL ECOLOGY, Issue 4 2008Sarah J. Richardson Summary 1Large-scale syntheses of leaf and litter N and P concentrations have demonstrated that leaf and litter N : P ratios both decline with latitude, that litter N : P ratios are generally greater than those of fresh leaves, and that the difference between these two ratios increases towards the tropics. These patterns have been ascribed to either a direct effect of temperature on plant growth rates and leaf-level physiology, or a decline in soil P towards the tropics. We test the hypothesis that global patterns of leaf and litter N : P ratios reflect a soil-P gradient by examining leaf and litter N : P in all species from a temperate rainforest along a soil-P gradient. 2The soil P gradient followed a toposequence of 20 plots. There was > 50-fold variation in soil total P from ridges (23,136 mg kg,1), through faces and terraces (32,744 mg kg,1), to gullies (440,1214 mg kg,1). 3The N : P ratios of leaves and litter both declined as soil total P increased, and the N : P ratio of litter was greater than that of fresh leaves. The difference between litter N : P and fresh leaf N : P declined with increasing soil total P supporting the hypothesis that global patterns of N : P ratios reflect gradients of soil P. 4Compositional turnover with soil P partly contributed to the total plant community leaf and litter nutrient concentration responses. However, consistent within-species responses pointed to a soil-based mechanism for determining responses by the total plant community. 5Comparisons of our litter data to global data sets suggest that the vegetation was well adapted to low soil nutrient concentrations with 37% of litter N and 24% of litter P samples being below published thresholds for highly proficient nutrient resorption. 6The range of leaf N and leaf P concentrations at our site captured a large portion of the range reported in global leaf trait data sets. 7Highly proficient P resorption was responsible for the divergence in leaf and litter N : P ratios on P-poor soils. These results emphasize the significance of proficient nutrient resorption as an advantageous plant trait for nutrient conservation on P-poor soils. [source] A role for endogenous reverse transcriptase in tumorigenesis and as a target in differentiating cancer therapyGENES, CHROMOSOMES AND CANCER, Issue 1 2006Paola Sinibaldi-Vallebona An unexpected result emerging from completion of the genome sequencing project is that a large portion of mammalian genomes is constituted by retrotransposons. A large body of published data supports the conclusion that retrotransposons are biologically active elements and indicates that retrotransposition is an ongoing process in mammalian genomes. Retroelements can act as insertional mutagens altering the coding integrity of genes and, recently, have been found to also affect the expression of cellular genes at the epigenetic level: in this light, they are a potential threat in that these events can trigger the onset of several pathologies including cancer. Retroelement genes, and particularly the gene coding for reverse transcriptase (RT), are typically expressed at high levels in transformed cells and tumors. In recent work, we have found that drug-mediated inhibition of the endogenous RT activity, or silencing of expression of active retrotransposons of the LINE-1 family by RNA interference, down-regulate cell growth and induce the activation of differentiating functions in several cancer cell lines. Moreover, the inhibition of endogenous RT activity in vivo antagonizes the growth of human tumors in animal models. In this review, we discuss newly emerging concepts on the role of retrotransposons and suggest that an abnormally high level of the RT activity that they encode may contribute to the loss of control in the proliferation and differentiation programs typical of transformed cells. In this light, RT-coding elements may be regarded as promising targets in the development of novel, differentiation-inducing approaches to cancer therapy. © 2005 Wiley-Liss, Inc. [source] A gene trap knockout of the abundant sperm tail protein, outer dense fiber 2, results in preimplantation lethality,GENESIS: THE JOURNAL OF GENETICS AND DEVELOPMENT, Issue 11 2006Nicholas A. Salmon Abstract Outer dense fiber 2 (Odf2) is highly expressed in the testis where it encodes a major component of the outer dense fibers of the sperm flagellum. Furthermore, ODF2 protein has recently been identified as a widespread centrosomal protein. While the expression of Odf2 highlighted a potential role for this gene in male germ cell development and centrosome function, the in vivo function of Odf2 was not known. We have generated Odf2 knockout mice using an Odf2 gene trapped embryonic stem cell (ESC) line. Insertion of a gene trap vector into exon 9 resulted in a gene that encodes a severely truncated protein lacking a large portion of its predicted coil forming domains as well as both leucine zipper motifs that are required for protein,protein interactions with ODF1, another major component of the outer dense fibers. Although wild-type and heterozygous mice were recovered, no mice homozygous for the Odf2 gene trap insertion were recovered in an extended breeding program. Furthermore, no homozygous embryos were found at the blastocyst stage of embryonic development, implying a critical pre-implantation role for Odf2. We show that Odf2 is expressed widely in adults and is also expressed in the blastocyst stage of preimplantation development. These findings are in contrast with early studies reporting Odf2 expression as testis specific and suggest that embryonic Odf2 expression plays a critical role during preimplantation development in mice. genesis 44:515,522, 2006. Published 2006 Wiley-Liss, Inc. [source] THE ENVIRONMENTAL VULNERABILITY OF CARIBBEAN ISLAND NATIONS,GEOGRAPHICAL REVIEW, Issue 1 2007Bryan J. Boruff ABSTRACT. Within the hazards- and disaster-research community consensus exists as to factors that magnify or attenuate the effects of extreme natural events on local places. But less agreement and understanding exist concerning the methods or techniques for comparing hazard vulnerability within or between places, especially small-island developing states. Using two Caribbean nations, Saint Vincent and Barbados, as study sites, we asked which island has the greater level of hazard vulnerability, and why. Results indicate that, although neither island has a large portion of its population living in extremely hazardous locations, Barbados has many more residents in risk-prone areas. The methods used in this research provide valuable tools for local emergency managers in assessing vulnerability, especially through the delineation of highly vulnerable hot spots. They can also help donor organizations interested in vulnerability reduction on islands use their resources more efficiently. [source] Interacting effects of CO2 partial pressure and temperature on photosynthesis and calcification in a scleractinian coralGLOBAL CHANGE BIOLOGY, Issue 11 2003Stéphanie Reynaud Abstract We show here that CO2 partial pressure (pCO2) and temperature significantly interact on coral physiology. The effects of increased pCO2 and temperature on photosynthesis, respiration and calcification rates were investigated in the scleractinian coral Stylophora pistillata. Cuttings were exposed to temperatures of 25°C or 28°C and to pCO2 values of ca. 460 or 760 ,atm for 5 weeks. The contents of chlorophyll c2 and protein remained constant throughout the experiment, while the chlorophyll a content was significantly affected by temperature, and was higher under the ,high-temperature,high- pCO2' condition. The cell-specific density was higher at ,high pCO2' than at ,normal pCO2' (1.7 vs. 1.4). The net photosynthesis normalized per unit protein was affected by both temperature and pCO2, whereas respiration was not affected by the treatments. Calcification decreased by 50% when temperature and pCO2 were both elevated. Calcification under normal temperature did not change in response to an increased pCO2. This is not in agreement with numerous published papers that describe a negative relationship between marine calcification and CO2. The confounding effect of temperature has the potential to explain a large portion of the variability of the relationship between calcification and pCO2 reported in the literature, and warrants a re-evaluation of the projected decrease of marine calcification by the year 2100. [source] Elevational gradients of small mammal diversity on the northern slopes of Mt. Qilian, ChinaGLOBAL ECOLOGY, Issue 6 2003Jun Sheng Li ABSTRACT Aim, Small mammal species richness and relative abundance vary along elevational gradients, but there are different patterns that exist. This study reports the patterns of distribution and abundance of small mammals along the broader elevational gradient of Mt. Qilian range. Location, The study was conducted in the Mt. Qilian range, north-western China, from June to August 2001. Methods, Removal trapping was conducted using a standardized technique at 7 sites ranging between 1600 and 3900 m elevation within three transects. Correlation, regression and graphical analyses were used to evaluate the diversity patterns along this elevational gradient. Results, ,In total, 586 individuals representing 18 nonvolant small mammal species were collected during 20 160 trap nights. Species composition was different among the three transects with 6 (33%) of the species found only within one transect. Elevational distribution and relative abundance of small rodents showed substantial spatial variation, with only 2 species showing nonsignificant capture frequencies across elevations. Despite these variations, some general patterns of elevational distribution emerged: humped-shape relationships between species diversity and elevation were noted in all three transects with diversity peaks at middle elevations. In addition, relative abundance was negatively correlated with elevation. Conclusions, Results indicate that maximum richness and diversity of nonvolant small mammals occurred at mid-elevations where several types of plants reached their maximum diversity and primary productivity, and where rainfall and humidity reached a maximum. It is demonstrated that the mid-elevation bulge is a general feature of at least a large portion of the biota on the Mt. Qilian range. [source] Observed and SST-forced seasonal rainfall variability across tropical AmericaINTERNATIONAL JOURNAL OF CLIMATOLOGY, Issue 12 2001Vincent Moron Abstract Three experiments starting from different initial conditions have been made with the ECHAM-4 atmospheric General Circulation Model (GCM) integrated at T30 resolution forced with the observed sea-surface temperature (SST) over the period 1960,1994. The tropical America modes of seasonal rainfall anomalies whose time variation is most accurately simulated by the GCM have been searched for using Singular Value Decomposition Analyses (SVDA) and Canonical Correlation Analysis (CCA) between observed and model fields. The leading modes revealed by SVDA and CCA are highly similar, even though the ordering of the modes showed some fluctuation. A first skilful rainfall anomaly mode has weights of the same sign almost everywhere in tropical America, except along the western coast and the sub-tropical margins. This mode appears in all of the four seasons assessed. A second major skilful mode is usually a bipolar north,south (N,S) rainfall anomaly pattern (clear in December,March, DJFM; March,May, MAM; and June,September, JJAS). A large portion of the skill of the first rainfall anomaly mode (same sign anomalies across tropical America except small patches along the western coast) is through variance that is in common with the Southern Oscillation Index (SOI). In addition to forcing from the central/eastern tropical Pacific SST, there also appears a contribution from contrasting SST anomalies in the tropical Atlantic. This rainfall mode is usually a regional portion of a more large-scale mode encompassing at least the whole tropical zone (especially in DJFM, MAM and September,November, SON). Analysis of the relationship of this mode with GCM circulation features reveals that a rainfall deficit (respectively excedent) over the main rainbelt of the tropical America region is associated with strengthening (respectively weakening) of the sub-tropical westerly jet streams, a global warming (respectively cooling) of the tropical atmosphere, an anomalous divergence (respectively convergence) in the lower levels and an anomalous convergence (respectively divergence) in the upper levels over tropical America and in the region of the Atlantic Inter-tropical Convergence Zone (ITCZ). Such global features are not so apparent for the dominant mode of JJAS, even though the correlations with El Niño,Southern Oscillation (ENSO) indicators (as SOI or NINO3 SST index) are as high as for the other seasons. The bipolar N,S rainfall anomaly mode in tropical America is mostly related to anomalous N,S gradient of SST anomalies in the tropical Atlantic. The atmospheric circulation anomalies emphasize changes in 850 hPa meridional winds in the tropical Atlantic. However, there is also interannual variance of this rainfall mode in both the model and observations that is unexplained by tropical Atlantic SSTs, but which is explained by central/eastern tropical Pacific SSTs and, potentially, SSTs from other tropical and extratropical areas. This is especially true in MAM. Some differences in the details of the model and observed teleconnection patterns are noted. Such differences can be used to statistically adjust the model simulations using the CCA or SVDA modes as basis patterns. Both statistical approaches have been applied and the results are consistent between the two. The increase of skill is stronger when temporal correlation (the pattern correlation) between the model and observed pattern is high (low) as for JJAS. The skill is moderate to high around the whole Amazon basin, but remains relatively low inside the Amazon basin, though reliability of the observations themselves may influence this result. Averaged over all the seasons, about 15,35% (35,55%) of the interannual grid-box (regional) seasonal rainfall variance is skilfully simulated from the observed SST forcing. Copyright © 2001 Royal Meteorological Society [source] Wireless video streaming with TCP and simultaneous MAC packet transmission (SMPT),INTERNATIONAL JOURNAL OF COMMUNICATION SYSTEMS, Issue 5 2004Frank H. P. Fitzek Abstract Video streaming is expected to account for a large portion of the traffic in future networks, including wireless networks. It is widely accepted that the user datagram protocol (UDP) is the preferred transport protocol for video streaming and that the transmission control protocol (TCP) is unsuitable for streaming. The widespread use of UDP, however, has a number of drawbacks, such as unfairness and possible congestion collapse, which are avoided by TCP. In this paper we investigate the use of TCP as the transport layer protocol for streaming video in a multi-code CDMA cellular wireless system. Our approach is to stabilize the TCP throughput over the wireless links by employing a recently developed simultaneous MAC packet transmission (SMPT) approach at the link layer. We study the capacity, i.e. the number of customers per cell, and the quality of service for streaming video in the uplink direction. Our extensive simulations indicate that streaming over TCP in conjunction with SMPT gives good performance for video encoded in a closed loop, i.e. with rate control. We have also found that TCP is unsuitable (even in conjunction with SMPT) for streaming the more variable open-loop encoded video. Copyright © 2004 John Wiley & Sons, Ltd. [source] Shifts in the ecological behaviour of plant species between two distant regions: evidence from the base richness gradient in miresJOURNAL OF BIOGEOGRAPHY, Issue 2 2008Petra Hájková Abstract Aim, Water pH and conductivity are known to be major environmental factors controlling the species composition of nutrient-poor wetlands. Based on the analysis of two large data sets of species co-occurrence, sampled along the entire pH/calcium gradient, we explored whether species exhibit similar or different ecological behaviour in the two regions. Location, West Carpathians (central Europe) and Bulgaria (south-eastern Europe), situated 800 km apart. Bulgaria represents a range margin for many mire species. Methods, The probability of occurrence of the 41 most common species along the pH and conductivity gradients was assessed using logistic regression fitted by means of generalized additive models. The species optimum and amplitude were determined. To check the possible effect of competitive release, we estimated where the potential maximum number of species (maximum overlap in realized niches) occurs along the base richness gradient. Results, Most of the 41 frequently occurring species showed a significant response to water pH and ln-transformed conductivity (approximating total mineral richness) in both regions. Eight species showed a shift in pH optimum greater than one unit, while 12 species showed the same or a larger shift along the conductivity gradient. Nearly all these striking shifts were connected to an extension of species tolerance towards mineral-poor acid habitats in Bulgaria, which causes links between species and measured factors to be conspicuously weaker in Bulgaria than in the West Carpathians. Regarding ecological amplitude, 24 species exhibited a wider tolerance to water conductivity in the West Carpathians, whereas 17 species exhibited a wider tolerance in Bulgaria. Main conclusions, A distinctive variation in the realized niche was observed in a large portion of the species examined. Niche shifts between local populations of the same species were similar to those of closely related vicariant species. Ecotypic adaptation within species is a possible explanation for this pattern. Other possible explanations (competitive release, specific habitat conditions, compensation for climate) seem to be less justified. The local populations of rich-fen species may have adapted to mineral-poor acid conditions in the high crystalline mountains of Bulgaria during dry periods of pleniglacials. Nomenclature,Marhold & Hindák (1998); for Balkan elements not included in this source, Andreev et al. (1992). [source] Human Capital and Stock Returns: Is the Value Premium an Approximation for Return on Human Capital?JOURNAL OF BUSINESS FINANCE & ACCOUNTING, Issue 3-4 2004Article first published online: 28 MAY 200, Bo Hansson This study, using a direct measure of the wage growth rate within firms, examines the value premium in relation to human capital. The results suggest that the dispersion in wage growth in value and growth stocks explains a large portion of the differences in stock returns. It appears that value stocks are less exposed to shocks in rents to human capital. Differences in labor force characteristics among value and growth stocks also proved to be an important factor in determining both the impact of future changes in labor income growth rate and firm value. The present findings are understood to mean that the ability of investors to forecast the dispersion in wage growth in firms is limited. [source] drr-2 encodes an eIF4H that acts downstream of TOR in diet-restriction-induced longevity of C. elegansAGING CELL, Issue 4 2010Tsui-Ting Ching Summary Dietary restriction (DR) results in a robust increase in lifespan while maintaining the physiology of much younger animals in a wide range of species. Here, we examine the role of drr-2, a DR-responsive gene recently identified, in determining the longevity of Caenorhabditis elegans. Inhibition of drr-2 has been shown to increase longevity. However, the molecular mechanisms by which drr-2 influences longevity remain unknown. We report here that drr-2 encodes an ortholog of human eukaryotic translation initiation factor 4H (eIF4H), whose function is to mediate the initiation step of mRNA translation. The molecular function of DRR-2 is validated by the association of DRR-2 with polysomes and by the decreased rate of protein synthesis observed in drr-2 knockdown animals. Previous studies have also suggested that DR might trigger a regulated reduction in drr-2 expression to initiate its longevity response. By examining the effect of increasing drr-2 expression on DR animals, we find that drr-2 is essential for a large portion of the longevity response to DR. The nutrient-sensing target of rapamycin (TOR) pathway has been shown to mediate the longevity effects of DR in C. elegans. Results from our genetic analyses suggest that eIF4H/DRR-2 functions downstream of TOR, but in parallel to the S6K/PHA-4 pathway to mediate the lifespan effects of DR. Together, our findings reveal an important role for eIF4H/drr-2 in the TOR-mediated longevity responses to DR. [source] Tuna Pepsin: Characteristics and Its Use for Collagen Extraction from the Skin of Threadfin Bream (Nemipterus spp.)JOURNAL OF FOOD SCIENCE, Issue 5 2008S. Nalinanon ABSTRACT:, Pepsin from the stomach of albacore tuna, skipjack tuna, and tongol tuna was characterized. Pepsin from all tuna species showed maximal activity at pH 2.0 and 50 °C when hemoglobin was used as a substrate. Among the stomach extract of all species tested, that of albacore tuna showed the highest activity (40.55 units/g tissue) (P < 0.05). Substrate-Native-PAGE revealed that pepsin from albacore tuna and tongol tuna consisted of 2 isoforms, whereas pepsin from skipjack tuna had only 1 form. The activity was completely inhibited by pepstatin A, while EDTA (ethylenediaminetetraacetic acid), SBTI (soybean trypsin inhibitor), and E-64 (1-(L -trans-epoxysuccinyl-leucylamino)-4-guanidinobutane) exhibited negligible effect. The activity was strongly inhibited by SDS (sodium dodecyl sulfate) (0.05% to 0.1%, w/v). Cysteine (5 to 50 mM) also showed an inhibitory effect in a concentration dependent manner. ATP, molybdate, NaCl, MgCl2, and CaCl2 had no impact on the activity. When tuna pepsin (10 units/g defatted skin) was used for collagen extraction from the skin of threadfin bream for 12 h, the yield of collagen increased by 1.84- to 2.32-fold and albacore pepsin showed the comparable extraction efficacy to porcine pepsin. The yield generally increased with increasing extraction time (P < 0.05). All collagen obtained with the aid of tuna pepsin showed similar protein patterns compared with those found in acid-solubilized collagen. Nevertheless, pepsin from skipjack tuna caused the degradation of , and , components. All collagens were classified as type I with large portion of ,-chain. However, proteins with molecular weight (MW) greater than 200 kDa were abundant in acid-solubilized collagen. [source] P/E changes: some new resultsJOURNAL OF FORECASTING, Issue 4 2009Thomas Zorn Abstract The P/E ratio is often used as a metric to compare individual stocks and the market as a whole relative to historical valuations. We examine the factors that affect changes in the inverse of the P/E ratio (E/P) over time in the broad market (S&P 500 Index). Our model includes variables that measure investor beliefs and changes in tax rates and shows that these variables are important factors affecting the P/E ratio. We extend prior work by correcting for the presence of a long-run relation between variables included in the model. As frequently conjectured, changes in the P/E ratio have predictive power. Our model explains a large portion of the variation in E/P and accurately predicts the future direction of E/P, particularly when predicted changes in E/P are large or provide a consistent signal over more than one quarter. Copyright © 2008 John Wiley & Sons, Ltd. [source] TFP growth and resource allocation in Singapore, 1965,2002JOURNAL OF INTERNATIONAL DEVELOPMENT, Issue 8 2007K. Ali Akkemik Abstract This paper investigates the impact of the reallocations of resources across manufacturing industries on aggregate manufacturing TFP growth in Singapore for the period 1965,2002. This is done by decomposing aggregate TFP growth into its sources, TFP growth arising from within individual industries and from the reallocations of capital and labour. The results show that TFP growth was negative before 1985 but improved remarkably to positive figures after 1985. Resource reallocations are found to account for a large portion of this improvement in aggregate TFP growth. Copyright © 2007 John Wiley & Sons, Ltd. [source] THE END-PERMIAN MASS EXTINCTION WAS SYNCHRONOUS COINCIDED WITH THE EVOLUTION OF TOXIC ALGAEJOURNAL OF PHYCOLOGY, Issue 2001Article first published online: 24 SEP 200 Lee, R. E.1 & Kugrens, P.2 1Department of Biomedical Sciences, College of Veterinary Medicine, Colorado State University, Fort Collins, CO 80523; 2Department of Biology, Colorado State University, Fort Collins, Co 80523 USA The cause of the end-Permian mass extinction, the greatest of all mass extinctions, is one of the most intriguing mysteries in the history of life. The end-Permian mass extinction was primarily a marine event, resulting principally in the elimination of sessile filter-feeding organisms. Based on two methods, molecular clocks and correlation with ancient atmospheric CO2, the algae derived from secondary endosymbioses are believed to have originated in the middle to late Permian. All of the toxic marine algae in today's oceans are derived from secondary endosymbioses. Therefore it appears likely that the end-Permian extinction was due to the evolution of toxic algae in the phytoplankton of late-Permian seas. Sieving of the toxic algae in the phytoplankton likely resulted in the decline and eventual elimination of a large portion of the Paleozoic fauna during the end-Permian mass extinction. [source] Plant responses to drought and phosphorus deficiency: contribution of phytohormones in root-related processesJOURNAL OF PLANT NUTRITION AND SOIL SCIENCE, Issue 4 2005Lutz Wittenmayer Abstract Environmental stresses are one of the most limiting factors in agricultural productivity. A large portion of the annual crop yield is lost to pathogens (biotic stress) or the detrimental effects of abiotic-stress conditions. There are numerous reports about chemical characterization of quantitatively significant substrate fluxes in plant responses to stress factors in the root-rhizosphere system, e.g., nutrient mobilization, heavy-metal and aluminum immobilization, or establishment of plant-growth-promoting rhizobacteria (PGPR) by exudation of organic anions, phytosiderophores, or carbohydrates into the soil, respectively. The hormonal regulation of these responses is not well understood. This paper highlights this complex process, stressing the involvement of phytohormones in plant responses to drought and phosphorus deficiency as examples. Beside ethylene, abscisic acid (ABA) plays an important role in drought-stress adaptation of plants. This hormone causes morphological and chemical changes in plants, ensuring plant survival under water-limited conditions. For example, ABA induces stomata closure, reduction in leaf surface, and increase in root : shoot ratio and, thus, reduction in transpiration and increase in soil volume for water uptake. Furthermore, it supports water uptake in soil with decreasing water potential by osmotic adjustment. Suitability of hormonal parameters in the selection for improving stress resistance is discussed. Auxins, ethylene, and cytokinins are involved in morphological adaption processes to phosphorus (P) deficiency (increase in root surface, e.g., by the formation of more dense root hairs or cluster roots). Furthermore, indole-3-acetic acid increases root exudation for direct and indirect phosphorus mobilization in soil. Nevertheless, the direct use of the trait "hormone content" of a particular plant organ or tissue, for example the use of the drought-stress-induced ABA content of detached leaves in plant breeding for drought-stress-resistant crops, seems to be questionable, because this procedure does not consider the systemic principle of hormonal regulation in plants. Reaktionen von Pflanzen auf Trockenstress und Phosphormangel: Die Rolle von Phytohormonen in wurzelbezogenen Prozessen Umweltstress stellt den wesentlichsten Limitierungsfaktor für die landwirtschaftliche Produktion dar. Ein erheblicher Teil der jährlichen Ernten geht durch pathogene Organismen (biotischer Stress) oder durch die verheerende Wirkung abiotischer Stressoren verloren (v. a. Trockenstress und Nährstoffmangel). Es gibt zahlreiche Untersuchungen zur stofflichen Charakterisierung der pflanzlichen Stressreaktion an der Wurzel, z.,B. Nährstoffmobilisierung, Schadstoffimmobilisierung oder Etablierung von wachstumsfördernden Rhizobakterien durch Wurzelabscheidungen. Die hormonelle Steuerung dieser Prozesse ist bisher weniger erforscht. Der Artikel geht dieser Problematik am Beispiel von Trockenstress und Phosphormangel unter besonderer Berücksichtigung von Phytohormonen nach. Bei der Anpassung von Pflanzen an Wassermangelbedingungen spielt neben Ethylen das Phytohormon Abscisinsäure (ABA) eine wichtige Rolle. Es induziert morphologische und chemische Veränderungen in der Pflanze, die ein Überleben unter Wassermangelbedingungen ermöglichen. Beispielsweise induziert die ABA den Stomataschluss, eine Verringerung der Blattoberfläche sowie eine Erhöhung des Wurzel:Spross-Verhältnisses und bewirkt dadurch eine verringerte Transpiration und Vergrößerung des Bodenvolumens zur Erschließung von Wasservorräten. Darüber hinaus kann eine ABA-induzierte Anreicherung von osmotisch wirksamen Verbindungen zur Wasseraufnahme bei sinkendem Wasserpotential im Boden beitragen. Bei Phosphat (P)-Mangel sind vor allem Auxine, Cytokine und Ethylen an der morphologischen Anpassung der Wurzeln (Vergrößerung der Wurzeloberfläche durch verstärkte Bildung von Wurzelhaaren oder Proteoidwurzeln) beteiligt. Darüber hinaus bewirkt Indolyl-3-Essigäure eine Intensivierung der Abgabe von Wurzelabscheidungen zur direkten oder indirekten P-Mobilisierung in der Rhizosphäre. Trotzdem wird die unmittelbare Verwendung des Indikators "Hormongehalt" eines bestimmten Pflanzenorganes, beispielsweise der trockenstressinduzierte ABA-Gehalt von abgeschnittenen Blättern, für die Züchtung auf Stressresistenz als problematisch angesehen, da sie das systemische Prinzip der Hormonregulation nicht berücksichtigt. [source] A view of the data on P2P file-sharing systemsJOURNAL OF THE AMERICAN SOCIETY FOR INFORMATION SCIENCE AND TECHNOLOGY, Issue 10 2009Wai Gen Yee Peer-to-peer (P2P) file sharing is a leading Internet application. Millions of users use P2P file-sharing systems daily to search for and download files, accounting for a large portion of Internet traffic. Due to their scale, it is important to fully understand how these systems work. We analyze user queries and shared files collected on the Gnutella system, draw some conclusions on the nature of the application, and propose some research problems. [source] Data cleansing for Web information retrieval using query independent featuresJOURNAL OF THE AMERICAN SOCIETY FOR INFORMATION SCIENCE AND TECHNOLOGY, Issue 12 2007Yiqun Liu Understanding what kinds of Web pages are the most useful for Web search engine users is a critical task in Web information retrieval (IR). Most previous works used hyperlink analysis algorithms to solve this problem. However, little research has been focused on query-independent Web data cleansing for Web IR. In this paper, we first provide analysis of the differences between retrieval target pages and ordinary ones based on more than 30 million Web pages obtained from both the Text Retrieval Conference (TREC) and a widely used Chinese search engine, SOGOU (www.sogou.com). We further propose a learning-based data cleansing algorithm for reducing Web pages that are unlikely to be useful for user requests. We found that there exists a large proportion of low-quality Web pages in both the English and the Chinese Web page corpus, and retrieval target pages can be identified using query-independent features and cleansing algorithms. The experimental results showed that our algorithm is effective in reducing a large portion of Web pages with a small loss in retrieval target pages. It makes it possible for Web IR tools to meet a large fraction of users' needs with only a small part of pages on the Web. These results may help Web search engines make better use of their limited storage and computation resources to improve search performance. [source] | |||||||||||||||||||||||||||||||||||||||||||||||||||||||