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Large Geographical Area (large + geographical_area)
Selected AbstractsMagnetic resonance imaging findings in a population-based cohort of children with cerebral palsyDEVELOPMENTAL MEDICINE & CHILD NEUROLOGY, Issue 1 2009MARNIE N ROBINSON MBBS The purpose of this study was to investigate the frequency and spectrum of magnetic resonance imaging (MRI) abnormalities in a population of children with cerebral palsy (CP) who were born in the years 2000 and 2001 in Victoria, Australia. In 2000 and 2001, 221 children (126 males, 95 females; mean age 6y [SD 7mo], range 5,7y) with CP, excluding those with CP due to postneonatal causes (6% of all cases), were identified through the Victorian Cerebral Palsy Register. All medical records were systematically reviewed and all available brain imaging was comprehensively evaluated by a single senior MRI radiologist. MRI was available for 154 (70%) individuals and abnormalities were identified in 129 (84%). The study group comprised 88% with a spastic motor type CP; the distribution was hemiplegia in 33.5%, diplegia in 28.5%, and quadriplegia in 37.6% of children. Overall, pathological findings were most likely to be identified in children with spastic hemiplegia (92%) and spastic quadriplegia (84%). Abnormalities were less likely to be identified in non-spastic motor types (72%) and spastic diplegia (52%). The most common abnormalities identified on MRI were periventricular white matter injury (31%), focal ischaemic/haemorrhagic lesions (16%), diffuse encephalopathy (14%), and brain malformations (12%). Dual findings were seen in 3% of patients. This is the first study to document comprehensively the neuroimaging findings of all children identified with CP born over a consecutive 24-month period in a large geographical area. [source] Will agri-environment schemes deliver substantial biodiversity gain, and if not why not?JOURNAL OF APPLIED ECOLOGY, Issue 1 2007MARK J. WHITTINGHAM Summary 1One of the main aims of agri-environment schemes (AES) is to increase biodiversity on farmland. Common conservation practice is to identify areas containing valuable resources (e.g. habitats, ecosystems and species) and then to protect them: ,protected area' schemes. AES differ from typical protected area schemes because they are often applied to small patches of land, such as field boundaries, and are sometimes located in areas where the target species does not occur. 2AES require an enormous amount of funding and they have been applied across a large geographical area, i.e. the European Union. However, recent evidence suggests mixed results regarding the effects of AES on biodiversity. 3It is hard to predict the consequences of AES on biodiversity because a number of factors are seldom accounted for explicitly. For example: (i) the occurrence of target species will vary between patches; (ii) there will be variation in habitat preference by species in different geographical areas; (iii) both optimal foraging theory and metapopulation theory predict that the distance from breeding individuals is likely to determine patch use; (iv) if resources are widely spread then the home ranges of some species may need to increase to encompass the multiple resources needed for breeding. The potential for these factors to affect the outcome of AES on biodiversity is discussed. 4Synthesis and applications. AES are likely to increase biodiversity if a lower number of larger resource patches are provided, in contrast to current practice that promotes many small fragmented areas of environmental resource. One way of achieving this may be to run these schemes more like traditional protected area schemes, with farms or groups of farms managed using extensive farming methods. Such an approach negates some of the problems of current AES and may help to address a wider range of concerns held by different countryside stakeholders. [source] DNA barcoding Central Asian butterflies: increasing geographical dimension does not significantly reduce the success of species identificationMOLECULAR ECOLOGY RESOURCES, Issue 5 2009VLADIMIR A LUKHTANOV Abstract DNA barcoding employs short, standardized gene regions (5' segment of mitochondrial cytochrome oxidase subunit I for animals) as an internal tag to enable species identification. Prior studies have indicated that it performs this task well, because interspecific variation at cytochrome oxidase subunit I is typically much greater than intraspecific variation. However, most previous studies have focused on local faunas only, and critics have suggested two reasons why barcoding should be less effective in species identification when the geographical coverage is expanded. They suggested that many recently diverged taxa will be excluded from local analyses because they are allopatric. Second, intraspecific variation may be seriously underestimated by local studies, because geographical variation in the barcode region is not considered. In this paper, we analyse how adding a geographical dimension affects barcode resolution, examining 353 butterfly species from Central Asia. Despite predictions, we found that geographically separated and recently diverged allopatric species did not show, on average, less sequence differentiation than recently diverged sympatric taxa. Although expanded geographical coverage did substantially increase intraspecific variation reducing the barcoding gap between species, this did not decrease species identification using neighbour-joining clustering. The inclusion of additional populations increased the number of paraphyletic entities, but did not impede species-level identification, because paraphyletic species were separated from their monophyletic relatives by substantial sequence divergence. Thus, this study demonstrates that DNA barcoding remains an effective identification tool even when taxa are sampled from a large geographical area. [source] Cryptic local populations in a temperate rainforest bat Chalinolobus tuberculatus in New ZealandANIMAL CONSERVATION, Issue 4 2000Colin F. J. O'Donnell Population structure of the threatened long-tailed bat (Chalinolobus tuberculatus) was studied over five summers between 1993 and 1998, in temperate Nothofagus rainforest in Fiordland, New Zealand. Composition of 95 communal groups was sampled and spatial distribution of individually marked bats investigated. Individual C. tuberculatus moved to new roost sites virtually every day. Long term non-random associations among individuals were found by a cluster analysis that revealed three distinct social groups. Groups contained on average 72.0 (± 26.0) (mean ± SD), 99.3 (± 19.0) and 131.7 (± 16.5) marked individuals/year. Collective foraging ranges of the three groups overlapped but roosting occurred in three geographically distinct adjacent areas. Only 1.6% of individuals switched between groups. Non-reproductive females and males switched between groups more often than reproductive females but individuals switched only once or twice during the study and then just for one night. Juveniles of both sexes were associated with their natal group as 1 year-olds and then later when breeding. Social groups were cryptic because foraging ranges of groups overlapped, bats belonging to each group spread over many roosts each day, and these roost sites changed from day to day. Bats moved infrequently between groups, potentially linking the local population assemblages. Future research should explore whether the population is structured in demes. Population structure did not conform to traditional metapopulation models because groups occurred in homogeneous habitat extending over a large geographical area. Conserving bat populations should entail preserving a representative number of subgroups but development of models for predicting minimum number of effective local populations is still required. [source] R58fs Mutation in the HGD Gene in a Family with Alkaptonuria in the UAEANNALS OF HUMAN GENETICS, Issue 1 2009Yousef M Abdulrazzaq Summary This study was conducted to determine the prevalence of alkaptonuria in the UAE population and to identify the genotype of affected individuals. In a 3 stage sampling technique 2981 pupils from Government schools in Al Ain and private schools in Dubai were selected to take part in the study, of whom 2857 provided urine samples. Urine collected was analysed for homogentisic acid by gas chromatography-mass spectrometry. Genomic DNA was isolated from the white blood cells of all family members of the affected case following standard established protocols. Specific PRC primers were designed to amplify all 14 exons of the HGD gene with the flanking intronic sequences including the splice site sequences. 2857 children returned a viable urine sample, of which one was highly positive for homogentisic acid. All 12 members of this girl's family were studied and one, a 22 year old brother, was found to excrete HGA. Another, a sister who had not provided a urine sample, was discovered by genetic testing. There were no complaints of joint pain or other symptoms in any member of this family. Parents were first cousins. We found a single nucleotide deletion c.342delA, located in exon 3, which resulted in a frameshift at amino acid position 58 (p.Arg58fs or p.R58fs). Alkaptonuria may be more common than it is thought to be with an allele prevalence estimated at 0.0107 (95% CI 0.000392 , 0.03473). The R58fs mutation is old, perhaps having occurred several thousand years ago, and has spread over a large geographical area. [source] Is there a connection between weather at departure sites, onset of migration and timing of soaring-bird autumn migration in Israel?GLOBAL ECOLOGY, Issue 6 2006Judy Shamoun-Baranes ABSTRACT Aims, Different aspects of soaring-bird migration are influenced by weather. However, the relationship between weather and the onset of soaring-bird migration, particularly in autumn, is not clear. Although long-term migration counts are often unavailable near the breeding areas of many soaring birds in the western Palaearctic, soaring-bird migration has been systematically monitored in Israel, a region where populations from large geographical areas converge. This study tests several fundamental hypotheses regarding the onset of migration and explores the connection between weather, migration onset and arrival at a distant site. Location, Globally gridded meteorological data from the breeding areas in north-eastern Europe were used as predictive variables in relation to the arrival of soaring migrants in Israel. Methods, Inverse modelling was used to study the temporal and spatial influence of weather on initiation of migration based on autumn soaring-bird migration counts in Israel. Numerous combinations of migration duration and temporal influence of meteorological variables (temperature, sea-level pressure and precipitable water) were tested with different models for meteorological sensitivity. Results, The day of arrival in Israel of white storks, honey buzzards, Levant sparrowhawks and lesser spotted eagles was significantly and strongly related to meteorological conditions in the breeding area days or even weeks before arrival in Israel. The cumulative number of days or cumulative value above or below a meteorological threshold performed significantly better than other models tested. Models provided reliable estimates of migration duration for each species. Main conclusions, The meteorological triggers of migration at the breeding grounds differed between species and were related to deteriorating living conditions and deteriorating migratory flight conditions. Soaring birds are sensitive to meteorological triggers at the same period every year and their temporal response to weather appears to be constrained by their annual routine. [source] Spatial synchrony in field vole Microtus agrestis abundance in a coniferous forest in northern England: the role of vole-eating raptorsJOURNAL OF APPLIED ECOLOGY, Issue 2000S.J. Petty 1.,The regional synchrony hypothesis (RSH) states that synchrony in microtine abundance over large geographical areas is caused by nomadic avian predators that specialize on small mammals for food. This has proved a difficult hypothesis to test because experiments at an appropriate scale are almost impossible. 2.,We used the decline of the most abundant, nomadic vole-eating raptors in an extensive conifer forest in northern England (Kielder Forest) as a natural experiment to evaluate their influence on synchronizing voles at different spatial scales. Field vole populations fluctuated on a 3,4-year cycle of abundance, similar to the periodicity in central Fennoscandia. 3.,Over a 23-year period, the combined numbers and density of kestrels and short-eared owls significantly declined. If these raptors were responsible for synchronizing vole abundance, the decline should have been associated with a decrease in synchrony. We could find no change in synchrony during the period of the greatest decline in kestrel and short-eared owl numbers (1980,97). 4.,In Kielder, vole abundance has been shown to change in a wave-like manner, with synchrony in the direction of the wave being 5,10-fold smaller than that reported in Fennoscandia. Tawny owls are sedentary and the most abundant vole-eating raptor in our study area, and might have an equalizing influence on vole abundance over smaller areas if they foraged in a density-dependent manner and responded functionally to increasing vole density. If this was the case, spatial variability in vole density should have been less in occupied than unoccupied owl territories, especially in years of low vole density when owls could take a larger proportion of the standing crop of voles. Even though tawny owls caught a significant proportion of the vole population, we could find no difference in variation in vole density between owl territories that were unoccupied, occupied with no breeding attempt, or occupied with a successful breeding attempt. 5.,We conclude that the small-scale synchrony in field vole abundance is unlikely to be caused by avian predators. Instead, it is more likely to be related to the pattern of clear-cutting that has developed in Kielder, which restricts vole dispersal. If this assumption is correct, we would predict more widespread synchrony in vole abundance in first-generation forests when extensive areas are planted over short periods of time, and this is supported by anecdotal evidence. These conclusions indicate that foresters may be able to manipulate the spatial dynamics of voles and vole predators by varying patch sizes within forests. [source] Using faecal DNA sampling and GIS to monitor hybridization between red wolves (Canis rufus) and coyotes (Canis latrans)MOLECULAR ECOLOGY, Issue 8 2003J. R. Adams Abstract The US Fish and Wildlife Service's (USFWS) Red Wolf Recovery Program recognizes hybridization with coyotes as the primary threat to red wolf recovery. Efforts to curb or stop hybridization are hampered in two ways. First, hybrid individuals are difficult to identify based solely on morphology. Second, managers need to effectively search 6000 km2 for the presence of coyotes and hybrids. We develop a noninvasive method to screen large geographical areas for coyotes and hybrids with maternal coyote ancestry by combining mitochondrial DNA sequence analysis of faeces (scat) and geographic information system (GIS) technology. This method was implemented on the Alligator River National Wildlife Refuge (1000 km2) in northeastern North Carolina. A total of 956 scats were collected in the spring of 2000 and 2001 and global positioning system (GPS) coordinates were recorded. Seventy-five percent of the scats were assigned to species and five coyote/hybrid scats were detected. Placement of scat location coordinates on a map of the experimental population area revealed that four of the coyote/hybrid scats were detected within the home ranges of sterilized hybrids. The other coyote/hybrid scat indicated the presence of a previously unknown individual. We suggest this method be expanded to include more of the experimental population area and be optimized for use with nuclear markers to improve detection of hybrid and back-crossed individuals. [source] Study of GM immunoglobulin allotypic system in Berbers and Arabs from MoroccoAMERICAN JOURNAL OF HUMAN BIOLOGY, Issue 1 2006C. Coudray The GM immunoglobulin allotype polymorphism was investigated in four Moroccan populations: three Berber groups from Khenifra (Middle Atlas), Amizmiz (High Atlas), and Bouhria (Beni Snassen) and one Arabic-speaking sample from the Doukkala area (Abda, Chaouia, Doukkali, and Tadla districts in south-central Morocco). In order to characterize the genetic relationships between the populations, our results were compared with those obtained for other North African groups (from Morocco, Algeria, Tunisia, and Niger) and for Middle-East Africans, sub-Saharans, and Southwest Europeans. Based on GM haplotype frequencies, Factorial Correspondence Analyses, FST significance testing, and hierarchical analyses of variance were performed. Our results reveal that Moroccan populations have heterogeneous GM profiles with high frequencies of GM haplotypes in Europeans (from 76% for Doukkala to 88% for Bouhria) and relatively high frequencies of GM haplotypes in sub-Saharans (from 11% for Bouhria to 23% for Amizmiz). The genetic diversity observed among Moroccans is not significantly correlated with either geographic or linguistic differentiation. In spite of their cultural and historical differentiation, we did not discover any significant genetic differences between Berbers and Arabic-speakers from Morocco. However, when large geographical areas are considered, our population samples are integrated in the North African GM variation, significantly distant from sub-Saharan groups but with a close relationship with Southwest European populations. Am. J. Hum. Biol. 18:23,34, 2006. © 2005 Wiley-Liss, Inc. [source] | |||||||||||||||||||