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Labeled Amino Acids (labeled + amino_acids)
Selected AbstractsL -Amino acid load to enhance PET differentiation between tumor and inflammation: an in vitro study on 18F-FET uptakeCONTRAST MEDIA & MOLECULAR IMAGING, Issue 5 2006S. Laïque Abstract Labeled amino acids (AA) are tumor tracers for use in nuclear medecine. O -(2-[18F]fluoroethyl)- L -tyrosine (FET) is transported by the L -system, known to function as an exchanger. In vitro utilization of FET, after a preload or prior to an afterload of non radioactive L -amino acids, was evaluated in order to measure the potential effects of AA content on the distinction between tumor and inflammatory lesions. Cellular uptake of FET was studied on rat osteosarcoma cells (ROS 17/2.8) and human leukocytes, initially loaded with nonradioactive L -tyrosine or L -methionine. FET efflux was evaluated from cells loaded with nonradioactive L -phenylalanine after tracer uptake. ROS 17/2.8 showed a higher sensitivity to preload and afterload effects on cellular FET content as compared with the leukocytes. We conclude that preload with L -tyrosine, prior to the administration of FET, may be a potential procedure to improve PET differentiation between tumor and inflammatory lesions. Copyright © 2006 John Wiley & Sons, Ltd. [source] Affinity monolith preconcentrators for polymer microchip capillary electrophoresisELECTROPHORESIS, Issue 16 2008Weichun Yang Abstract Developments in biology are increasing demands for rapid, inexpensive, and sensitive biomolecular analysis. In this study, polymer microdevices with monolithic columns and electrophoretic channels were used for biological separations. Glycidyl methacrylate- co -ethylene dimethacrylate monolithic columns were formed within poly(methyl methacrylate) microchannels by in situ photopolymerization. Flow experiments in these columns demonstrated retention and then elution of amino acids under conditions optimized for sample preconcentration. To enhance analyte selectivity, antibodies were immobilized on monoliths, and subsequent lysozyme treatment blocked nonspecific adsorption. The enrichment capability and selectivity of these affinity monoliths were evaluated by purifying fluorescently tagged amino acids from a mixture containing green fluorescent protein (GFP). Twenty-fold enrichment and 91% recovery were achieved for the labeled amino acids, with a >25,000-fold reduction in GFP concentration, as indicated by microchip electrophoresis analysis. These devices should provide a simple, inexpensive, and effective platform for trace analysis in complex biological samples. [source] Signal denoising and baseline correction by discrete wavelet transform for microchip capillary electrophoresisELECTROPHORESIS, Issue 18 2003Bi-Feng Liu Abstract Signal denoising and baseline correction using discrete wavelet transform (DWT) are described for microchip capillary electrophoresis (MCE). DWT was performed on an electropherogram describing a separation of nine tetramethylrohodamine-5-isothiocyanate labeled amino acids, following MCE with laser-induced fluorescence detection, using Daubechies 5 wavelet at a decomposition level of 6. The denoising efficiency was compared with, and proved to be superior to, other commonly used denoising techniques such as Fourier transform, Savitzky-Golay smoothing and moving average, in terms of noise removal and peak preservation by directly visual inspection. Novel strategies for baseline correction were proposed, with a special interest in baseline drift that frequently occurred in chromatographic and electrophoretic separations. [source] Stereoselective biosynthesis of chloroarylpropane diols by the basidiomycete Bjerkandera adusta: exploring the roles of amino acids, pyruvate, glycerol and phenyl acetyl carbinolFEMS MICROBIOLOGY LETTERS, Issue 1 2003Peter James Silk Abstract Bjerkandera adusta produces many chlorometabolites including chlorinated anisyl metabolites (CAMs) and 1-arylpropane-1,2-diols (1, 2, 3, 4) as idiophasic metabolic products of l -phenylalanine. These diols are stereoselectively biosynthesized from a C7 -unit (benzylic, from l -phenylalanine) and a C2 -unit, of unknown origin, as predominantly erythro (1R,2S) enantiomers. Of the labeled amino acids tested as possible C2 -units, at the 4,10 mM level, none were found to efficiently label the 2,3-propane carbons of the diols. However, glycine (2- 13C), l -serine (2,3,3-d3) and l -methionine (methyl-d3) entered the biomethylation pathway. Neither pyruvate (2,3- 13C2), acetate (1,2- 13C2), acetaldehyde (d4) nor ethanol (ethyl-d5) labeled the 2,3-propane carbons of the diols at the 4,10 mM level. Pyruvate (2,3- 13C2) and l -serine (2,3,3-d3) (which also entered the biomethylation pathway) did, however, effectively label the 2,3-propane carbons of the ,-ketols and diols at the 40 mM level as evidenced by mass spectrometry. Glycerol (1,1,2,3,3-d5) also appeared to label one of the 2,3-propane carbons (ca. 5% as 2H2 in the C3 side chain) as suggested by mass spectrometric data and also entered the biomethylation pathway, likely via amino acid synthesis. Glycerol (through pyruvate), therefore, likely supplies C2 and C3 of the propane side chain with arylpropane diol biosynthesis. Incubation of B. adusta with synthetic [2- 2H1,2- 18O]-glycerol showed that neither 2H nor 18O were incorporated in the ,-ketols or diols. The oxygen atom on the C2 of the ketols/diols, therefore, does not appear to come from the oxygen atom on the C2 of glycerol. Glycerol, however, can readily form l -serine (which can then form pyruvate via PLP/serine dehydratase and involve transamination washing out the 18O label and providing the oxygen from water), and can then go on to label the C2 -unit. Labeled ,-ketol, phenyl acetyl carbinol (5) (PAC; ring-d5, 2,3- 13C2 propane) cultured with B. adusta leads to stereospecific reduction to the (1R,2S)-diol (6) (ring-d5 and 2,3- 13C2); in all other metabolites produced, the 2,3- 13C2 label is washed out. Incubation of the fungus with 4-fluorobenzaldehyde (13) produces a pooling of predominantly erythro (1R,2S) 1-(4,-fluorophenyl)-1,2-propane diol (18 as diacetate) (through the corresponding ,-ketols 16, 17). Blocking the para-position with fluorine thus appears to prevent ring oxygenation and also chlorination, forcing the conclusion that para-ring oxygenation precedes meta-chlorination. [source] Temperature dependence and resonance assignment of 13C NMR spectra of selectively and uniformly labeled fusion peptides associated with membranesMAGNETIC RESONANCE IN CHEMISTRY, Issue 2 2004Michele L. Bodner Abstract HIV-1 and influenza viral fusion peptides are biologically relevant model fusion systems and, in this study, their membrane-associated structures were probed by solid-state NMR 13C chemical shift measurements. The influenza peptide IFP-L2CF3N contained a 13C carbonyl label at Leu-2 and a 15N label at Phe-3 while the HIV-1 peptide HFP-UF8L9G10 was uniformly 13C and 15N labeled at Phe-8, Leu-9 and Gly-10. The membrane composition of the IFP-L2CF3N sample was POPC,POPG (4:1) and the membrane composition of the HFP-UF8L9G10 sample was a mixture of lipids and cholesterol which approximately reflects the lipid headgroup and cholesterol composition of host cells of the HIV-1 virus. In one-dimensional magic angle spinning spectra, labeled backbone 13C were selectively observed using a REDOR filter of the 13C,15N dipolar coupling. Backbone chemical shifts were very similar at ,50 and 20°C, which suggests that low temperature does not appreciably change the peptide structure. Relative to ,50°C, the 20°C spectra had narrower signals with lower integrated intensity, which is consistent with greater motion at the higher temperature. The Leu-2 chemical shift in the IFP-L2CF3N sample correlates with a helical structure at this residue and is consistent with detection of helical structure by other biophysical techniques. Two-dimensional 13C,13C correlation spectra were obtained for the HFP-UF8L9G10 sample and were used to assign the chemical shifts of all of the 13C labels in the peptide. Secondary shift analysis was consistent with a ,-strand structure over these three residues. The high signal-to-noise ratio of the 2D spectra suggests that membrane-associated fusion peptides with longer sequences of labeled amino acids can also be assigned with 2D and 3D methods. Copyright © 2004 John Wiley & Sons, Ltd. [source] | ||||||||||