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Intense Signal (intense + signal)
Selected AbstractsMetal ion attachment to the matrix meso-tetrakis(pentafluorophenyl)porphyrin, related matrices and analytes: an experimental and theoretical study,JOURNAL OF MASS SPECTROMETRY (INCORP BIOLOGICAL MASS SPECTROMETRY), Issue 11 2009Jeroen J. A. van Kampen Abstract In a previous study [van Kampen et al.Analytical Chemistry 2006; 78: 5403], we found that meso-tetrakis (pentafluorophenyl)porphyrin (F20TPP), in combination with lithium salts, provides an efficient matrix to cationize small molecules by Li+ attachment and that this combination can be successfully applied to the quantitative analysis of drugs, such as antiretroviral compounds using matrix-assisted laser desorption ionization in conjunction with a time-of-flight analyzer (MALDI,TOF). In the present study, we further explore the mechanism of metal ion attachment to F20TPP and analytes by MALDI,FTMS(/MS). To this end, we have studied the interaction of F20TPP and analytes with various mono-, di- and trivalent metal ions (Li+, Na+, K+, Rb+, Cs+, Co2+, Cu2+, Zn2+, Fe2+, Fe3+ and Ga3+). For the alkali cations, we find that F20TPP forms complexes only with Li+ and Na+; in addition, model analyte molecules such as poly(ethyleneglycol)s, mixed with F20TPP and the alkali cations, also only form Li+ and Na+ adducts. This contrasts sharply with the commonly used matrix 2,5-dihydroxybenzoic acid, where analytes are most efficiently cationized by Na+ or K+. Reasons for this difference are delineated. Ab initio calculations on porphyrin itself reveal that even the smallest alkali cation, Li+, does not fit in the porphyrin cavity, but lies on top of it, pushing the 21H and 23 H hydrogen atoms out of and below the plane with concomitant bending of the porphyrin skeleton in the opposite direction, i.e. toward the cation. Thus, the Li+ ion is not effectively sequestered and is in fact exposed and thus accessible for donation to analyte molecules. Interaction of F20TPP with di- and trivalent metal ions leads to protoporphyrin,metal ions, where the metal ion is captured within the protoporphyrin dianion cavity. The most intense signal is obtained when F20TPP is reacted with CuCl2 and then subjected to laser ablation. This method presents an easy general route to study the metal containing protoporphyrin molecules, which could all act as potential MALDI matrices. Copyright © 2009 John Wiley & Sons, Ltd. [source] Identification, molecular cloning, and cellular distribution of the rat homolog of minichromosome maintenance protein 7 (MCM7) in the rat testis,MOLECULAR REPRODUCTION & DEVELOPMENT, Issue 7 2006Emmanuelle Com Abstract As part of a program to decipher the rat testicular proteome, we studied spermatogonia and identified numerous proteins including the human homolog of the Minichromosome Maintenance Protein 7 (MCM7). MCM7 has been implicated in DNA replication in various species, but had not been detected in the testis. Here we describe the cellular distribution of MCM7 transcripts and protein, and their testicular ontogenetic expression. The full-length coding region of the rat MCM7 was also characterized. Northern blot analyses showed that MCM7 transcripts are more abundant in the testis than other organs and confirmed the presence of the 2.4 kb MCM7 transcript at all ages studied. Interestingly, two additional transcripts of 3.2 and 1.6 kb were found from 26 days post partum onwards, when spermatocytes and spermatids accumulate within the tubules. This was confirmed in isolated cell types: the three MCM7 transcripts were observed in meiotic and post-meiotic germ cells. The 3.2 kb isoform has an extended 5, untranslated region (UTR) and the 1.6 kb transcript is the result of alternative splicing of five exons. Western blot and immunohistochemistry experiments evidenced abundant MCM7 in proliferating gonocytes and Sertoli cells in the fetal testis. In the adult testis, an intense signal was observed in spermatogonia and primary spermatocytes. We conclude that the Mcm7 is one example of genes that are differently transcribed and translated in somatic and spermatogenetic cells in mammals. Further work is required to determine the roles of MCM7 in spermatogonia and germ lineage. Mol. Reprod. Dev. © 2006 Wiley-Liss, Inc. [source] Affinity of corpora amylacea for oligonucleotides: Sequence dependency and proteinaceous binding motifNEUROPATHOLOGY, Issue 4 2006Ioan A. Balea Corpora amylacea (CA) have an affinity to nucleic acids as shown by in situ hybridization experiments. However, little is known about the specificity of this interaction, as well as the mechanism involved. We investigated the ability of different probes of digoxigenin-labeled oligonucleotides corresponding to some specific neuronal receptors, both sense and antisense, to bind to CA from human autopsy brain tissue. The bound nucleotides were detected with antidigoxigenin antibody and the signal was further amplified using the tyramide signal amplification system. The affinity of binding varies with the sequence of nucleotides. The most intense signal is produced by the adenosine-2A receptor antisense probe and the least intense signal is produced by the N-methyl-D-aspartate receptor sense probe. The affinity of binding for the same probe does not depend on the localization of CA in the central nervous system. Complete staining loss by proteinase K pretreatment in higher concentrations shows that the binding motif is partially proteinaceous. The circumferential but not the punctate internal staining is diminished by mild amylglucosidase pretreatment, suggesting a process of progressive apposition and condensation. [source] Formation and reactions of cluster ions from aromatic carboxylic acids together with amino acidsISRAEL JOURNAL OF CHEMISTRY, Issue 2 2001Anja Meffert The cluster formation of several aromatic carboxylic acids, ferulic acid, vanillic acid, sinapinic acid, and 3,4-dihydroxybenzoic acid was investigated by means of laser desorption into a supersonic beam followed by multiphoton ionization-time-of-flight mass spectrometry. The formation of not only homogeneous clusters, but also of heterogeneous clusters with some small amino acids was studied. The different neutral clusters formed in the supersonic expansion were ionized by a multiphoton process employing either nano- or femtosecond laser pulses. Strong differences in the detection of cluster ions due to the laser pulse length employed for multiphoton ionization were observed. Only femtosecond activation led to mass spectra with intense signals of the cluster ions. In addition, in the case of femtosecond ionization, protonated amino acids were detected in the mass spectra. As direct ionization of the free amino acids is not possible under the chosen ionization conditions because they lack an adequate chromophore, these protonated amino acids are assumed to be formed via an intracluster proton transfer in the heterogeneous dimer and subsequent decay of the ionized cluster (dissociative proton transfer). Such well-known processes for heterogeneous clusters consisting of a substituted aromatic molecule and small polar solvent molecules may be involved in the matrixassisted laser desorption ionization (MALDI) process. [source] | ||||||||||