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Imprinting Effects (imprinting + effects)
Selected AbstractsRELATIVE CONTRIBUTION OF ADDITIVE, DOMINANCE, AND IMPRINTING EFFECTS TO PHENOTYPIC VARIATION IN BODY SIZE AND GROWTH BETWEEN DIVERGENT SELECTION LINES OF MICEEVOLUTION, Issue 5 2009Reinmar Hager Epigenetic effects attributed to genomic imprinting are increasingly recognized as an important source of variation in quantitative traits. However, little is known about their relative contribution to phenotypic variation compared to those of additive and dominance effects, and almost nothing about their role in phenotypic evolution. Here we address these questions by investigating the relative contribution of additive, dominance, and imprinting effects of quantitative trait loci (QTL) to variation in "early" and "late" body weight in an intercross of mice selected for divergent adult body weight. We identified 18 loci on 13 chromosomes; additive effects accounted for most of the phenotypic variation throughout development, and imprinting effects were always small. Genetic effects on early weight showed more dominance, less additive, and, surprisingly, less imprinting variation than that of late weight. The predominance of additivity of QTL effects on body weight follows the expectation that additive effects account for the evolutionary divergence between selection lines. We hypothesize that the appearance of more imprinting effects on late body weight may be a consequence of divergent selection on adult body weight, which may have indirectly selected for alleles showing partial imprinting effects due to their associated additive effects, highlighting a potential role of genomic imprinting in the response to selection. [source] Estimation of variance components due to imprinting effects with DFREML and VCE: results of a simulation studyJOURNAL OF ANIMAL BREEDING AND GENETICS, Issue 1 2002A. ESSL Treating gametes as homozygous diploid individuals, TIER and SÖLKNER (Theor. Appl. Genet. 85: 868,872, 1993) proposed a method which manages the use of available computer programs with a common animal model to estimate variance components caused by imprinting effects. Despite some relevant model restrictions, this approach has already been used in some field data analyses by an adapted version of the widely used DFREML computer program, subsequently indicated by DFREMLa. The main objective of this study was to ascertain the properties of DFREMLa by computer simulation and to examine other alternative estimation approaches. The most important results may be summarized as follows: (1) Treating gametes as homozygous diploid individuals has the consequence that one-half of the actually realized gametic effect is totally abstracted in variance component estimation. Thus, an additional adjustment of the phenotypic variance calculated by DFREMLa is necessary to get correct values of estimated variance component ratios. (2) Adjusted DFREMLa estimates yielded correct results when animals were unselected and only maternal or paternal imprinting (not both simultaneously) occurred. (3) When the model did not adequately account for the additive genetic component within a maternal lineage, significant upward biases for the cytoplasmic component were observed. (4) The use of a simple dam and sire model with appropriate relationship matrices can be recommended when only the difference of maternal and paternal imprinting effects is of primary interest and the covariance between maternal halfsibs is not substantially increased by common environmental effects. (5) An adequate estimation of variance components for all possible imprinting situations requires the use of an animal model augmented by both maternal and paternal gametic effects. Unfortunately, a computer program on the basis of such a model does not yet exist. Schätzung von Varianzkomponenten für Imprintingeffekte mittels DFREML und VCE: Ergebnisse einer Simulationsstudie TIER and SÖLKNER (Theor. Appl. Genet. 85: 868,872, 1993) schlugen eine Methode zur Schätzung von imprintingbedingten Varianzkomponenten vor, die mit einem einfach zu adaptierenden Computerprogramm auf der Basis eines üblichen Tiermodells vorgenommen werden kann, indem sie Gameten wie homozygot diploide Individuen behandelten. Obwohl dieser Ansatz einige praxisrelevante Einschränkungen hat, wurde er bereits bei einigen Felddatenanalysen verwendet. Für diesen Zweck wurde eine entsprechend adaptierte Version des häufig verwendeten Computerprogrammes DFREML eingesetzt, die im folgenden mit DFREMLa bezeichnet wird. Das Ziel der vorliegen Untersuchung lag darin, die Eigenschaften von DFREMLa bei verschiedenen Imprintingsituationen zu überprüfen und weiters die Brauchbarkeit anderer möglicher Schätzansätze zu überprüfen. (1) Werden Gameten wie diploide homozygote Individuen aufgefaßt, dann geht bei der Schätzung von Varianzkomponenten mit DFREMLa eine Hälfte des tatsächlich wirksamen Gameteneffektes völlig verloren. Das heißt, die von DFREMLa ausgewiesenen Ergebnisse müssen nachträglich entsprechend adjustiert werden, um korrekte Schätzergebnisse für alle jene Quotienten von Varianzkomponenten zu erhalten, bei denen die gesamte phänotypische Varianz im Nenner steht. (2) Die adjustierten DFREMLa Schätzwerte lieferten in all jenen Fällen korrekte Ergebnisse, wo keine Selektion der Tiere erfolgte und entweder nur maternales oder paternales Imprinting (nicht beide gleichzeitig) auftrat. (3) Alle Modelle, bei denen die additiv genetische Komponente innerhalb einer Kuhfamilie keine adäquate Berücksichtigung fand, führten zu einer systematischen Überschätzung der zytoplasmatischen Varianzkomponente. (4) Ist nur jene Varianzkomponente von Interesse, die durch unterschiedlich starkes maternales bzw. paternales Imprinting erklärt werden kann, dann kann auch die Verwendung einfacher Vater-bzw. Muttermodelle empfohlen werden. Voraussetzung hierfür ist allerdings, daß die Kovarianz zwischen mütterlichen Halbgeschwistern durch keine gemeinsame Umwelt erhöht ist. (5) Eine für alle Imprintingsituationen problemadäquate Schätzung von Varianzkomponenten verlangt die Anwendung eines Tiermodelles, erweitert um beide imprintingbedingten Gameteneffekte. Leider fehlt gegenwärtig hierfür noch ein entsprechendes Computerprogramm. [source] Enantioseparation with D -Phe- and L -Phe-imprinted PAN-based membranes by ultrafiltrationJOURNAL OF CHEMICAL TECHNOLOGY & BIOTECHNOLOGY, Issue 4 2008Noaman Ul-Haq Abstract BACKGROUND: Solute rejection by a molecularly imprinted membrane was observed for the first time. Enantioselective poly[(acrylonitrile)-co-(acrylic acid)] membranes were prepared by a wet-phase inversion method using D -phenylalanine (D -Phe) and L -phenylalanine (L -Phe) as templates, separately, in order to compare the imprinting effects of these isomers using an ultrafiltration experiment. RESULTS: Recognition sites were successfully created in the prepared membranes, which had a nanoporous structure. The rejection selectivities of 0.13 and 0.28, adsorption selectivities of 2.25 and 2.40 and permselectivities of 1.94 and 2.08 were achieved for the D - and L -Phe-imprinted membranes, respectively, after 16 mL (34 min) of ultrafiltration. CONCLUSION: Solute rejection by a molecularly imprinted membrane was selective. The performance characteristics of both the D - and L -Phe-imprinted membranes were different. Thus, the selection of an appropriate stereoisomer as a template plays an important role in the imprinting of membranes with regard to chiral resolution by ultrafiltration. Copyright © 2008 Society of Chemical Industry [source] One-pot synthesis of surface-functionalized molecularly imprinted polymer microspheres by iniferter-induced "living" radical precipitation polymerizationJOURNAL OF POLYMER SCIENCE (IN TWO SECTIONS), Issue 15 2010Junyi Li Abstract This article describes for the first time the development of a new polymerization technique by introducing iniferter-induced "living" radical polymerization mechanism into precipitation polymerization and its application in the molecular imprinting field. The resulting iniferter-induced "living" radical precipitation polymerization (ILRPP) has proven to be an effective approach for generating not only narrow disperse poly(ethylene glycol dimethacrylate) microspheres but also molecularly imprinted polymer (MIP) microspheres with obvious molecular imprinting effects towards the template (a herbicide 2,4-dichlorophenoxyacetic acid (2,4-D)), rather fast template rebinding kinetics, and appreciable selectivity over structurally related compounds. The binding association constant Ka and apparent maximum number Nmax for the high-affinity sites of the 2,4-D imprinted polymer were determined by Scatchard analysis and found to be 1.18 × 104 M,1 and 4.37 ,mol/g, respectively. In addition, the general applicability of ILRPP in molecular imprinting was also confirmed by the successful preparation of MIP microspheres with another template (2-chloromandelic acid). In particular, the living nature of ILRPP makes it highly useful for the facile one-pot synthesis of functional polymer/MIP microspheres with surface-bound iniferter groups, which allows their direct controlled surface modification via surface-initiated iniferter polymerization and is thus of great potential in preparing advanced polymer/MIP materials. © 2010 Wiley Periodicals, Inc. J Polym Sci Part A: Polym Chem 48: 3217,3228, 2010 [source] Preparation of molecularly imprinted polymer microspheres via atom transfer radical precipitation polymerizationJOURNAL OF POLYMER SCIENCE (IN TWO SECTIONS), Issue 13 2009Baiyi Zu Abstract The first combined use of atom transfer radical polymerization (ATRP) and precipitation polymerization in the molecular imprinting field is described. The utilized polymerization technique, namely atom transfer radical precipitation polymerization (ATRPP), provides MIP microspheres with obvious molecular imprinting effects towards the template, fast template binding kinetics and an appreciable selectivity over structurally related compounds. The living chain propagation mechanism in ATRPP results in MIP spherical particles with diameters (number-average diameter Dn , 3 ,m) much larger than those prepared via traditional radical precipitation polymerization (TRPP). In addition, the MIP microspheres prepared via ATRPP have also proven to show significantly higher high-affinity binding site densities on their surfaces than the MIP generated via TRPP, while the binding association constants Ka and apparent maximum numbers Nmax of the high-affinity sites as well as the specific template bindings are almost the same in the two cases. © 2009 Wiley Periodicals, Inc. J Polym Sci Part A: Polym Chem 47: 3257,3270, 2009 [source] Influence of parental origin of the X chromosome on physical phenotypes and GH responsiveness of patients with Turner syndromeCLINICAL ENDOCRINOLOGY, Issue 1 2010Jung Min Ko Summary Objective, Previous studies have reported the effects of parental origin of the X chromosome on specific phenotypic and cognitive profiles in Turner syndrome (TS). Here, we investigate the possible parent-of-origin effects on physical phenotypes and responsiveness to GH in Korean patients with TS. Design and patients, Thirty-three patients with TS with nonmosaic karyotype and their parents participated in this study. The parental origin of the normal X chromosome was determined by comparing parental DNA polymorphisms using nine highly polymorphic microsatellite markers on the X chromosome. For the evaluation of parent-of-origin effects, typical phenotypic traits, including congenital malformations, auxological and endocrinological profiles, were compared. Results, The retained X chromosome was of maternal (Xm) origin in 60·6% patients and paternal (Xp) origin in 39·4% patients. No significant parent-of-origin effects on stature, body mass index, cardiac, renal, skeletal, lymphatic, hearing or ocular systems were evident. We observed no differences in height gain after GH treatment. In patients with the 45,X karyotype, patient height was positively correlated with maternal height in the Xm group (r = 0·60, P = 0·04). Moreover, patient height was more significantly correlated with maternal than paternal height, irrespective of the parental origin of the retained X chromosome. Conclusion, While we observed no significant impact of parental origin of the X chromosome on several phenotypic traits in patients with TS, a maternal imprinting effect on stature was suggested at least in patients with 45,X. Further studies on a larger number of patients with TS are essential to define the potential imprinting effects of undetermined genes on the X chromosome. [source] | ||||||||||