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Growth Phase (growth + phase)
Kinds of Growth Phase Terms modified by Growth Phase Selected AbstractsGrowth Phase and Elemental Stoichiometry of Bacterial Prey Influences Ciliate Grazing SelectivityTHE JOURNAL OF EUKARYOTIC MICROBIOLOGY, Issue 5 2009DAVID F. GRUBER ABSTRACT. Protozoa are known to selectively graze bacteria and can differentiate prey based on size and viability, but less is known about the effects of prey cellular composition on predator selectivity. We measured the effect of growth phase and elemental stoichiometry of Escherichia coli on grazing by two ciliates, Euplotes vannus and Cyclidium glaucoma. Bacterial cells of a single strain were transformed with green and red fluorescent protein and harvested from culture at differing growth stages. Cells in exponential growth phase had low carbon:phosphorus (39) and nitrogen:phosphorus (9) ratios, while cells from stationary phase had high carbon:phosphorus of 104 and nitrogen:phosphorus of 26. When offered an equal mixture of both types of bacteria, Cyclidium grazed stationary phase, high carbon:phosphorus, high nitrogen:phosphorus cells to 22% of initial abundance within 135 min, while Euplotes reduced these cells to 33%. Neither ciliate species decreased the abundance of the exponential phase cells, lower carbon:phosphorus and nitrogen:phosphorus, relative to control treatments. Because protozoa have higher nitrogen:phosphorus and carbon:phosphorus ratios than their prokaryotic prey, this study raises the possibility that it may be advantageous for protozoa to preferentially consume more slowly growing bacteria. [source] Analysis of Sir2E in the cellular slime mold Dictyostelium discoideum: Cellular localization, spatial expression and overexpressionDEVELOPMENT GROWTH & DIFFERENTIATION, Issue 8 2008Takahiro Katayama It has been reported that Dictyostelium discoideum encodes four silent information regulator 2 (Sir2) proteins (Sir2A,D) showing sequence similarity to human homologues of Sir2 (SIRT1,3). Further screening in a database revealed that D. discoideum encodes an additional Sir2 homologue (Sir2E). The amino acid sequence of Sir2E is not similar to those of SIRTs but is similar to those of proteins encoded by Giardia lamblia, Cryptosporidium hominis and Cryptosporidium parvum. Fluorescence of Sir2E-green fluorescent protein fusion protein was detected in the D. discoideum nucleus, indicating that Sir2E is a nuclear localizing protein. Reverse transcription,polymerase chain reaction and whole-mount in situ hybridization analyses showed that D. discoideum expressed sir2E in amoebae in the growth phase and in prestalk cells in the developmental phase. D. discoideum overexpressing sir2E grew faster than the wild type. These results indicate that Sir2E plays important roles both in the growth phase and developmental phase of D. discoideum. [source] The significance of feeding for reproduction in a male Metastriata tick, Haemaphysalis longicornis (Acari: Ixodidae)ACTA ZOOLOGICA, Issue 1 2000Tomohide Matsuo In Haemaphysalis longicornis, secretions of the male accessory genital glands were regenerated by re-feeding for 3 or 4 days, although the secretions were almost completely released during the first copulation. It was also shown that spermatogenesis continued during re-feeding, since prospermia (elongated spermatids) were deposited in the seminal vesicle. A potent male seeks a receptive female on the host for copulation. The movement of males to different attachment sites occurred between the third and fourth day of re-feeding, and completely re-fed males (for 4 days) were able to copulate successfully. Spermatogenic cells, ranging from spermatogonia at the anterior end to prospermia at the posterior end, were found in fed males. Degeneration of spermatocytes at the great growth phase and developing spermatids prior to final development of prospermia were seen in virgin males without re-feeding after the first meal. Fully elongated spermatids (prospermia) appeared morphologically normal up to 10 days after the first feeding. Degeneration of spermatocytes and developing spermatids occurred from the second day and was almost complete by the fourth day. The degenerating cells shrank, became electron-dense, and finally died. A reduction in secretions of the four lobes of the accessory glands occurred during the 10 days after feeding. [source] The exopolysaccharide of Rhizobium sp.ENVIRONMENTAL MICROBIOLOGY, Issue 8 2008Brassica napus roots but contributes to root colonization, YAS34 is not necessary for biofilm formation on Arabidopsis thaliana Summary Microbial exopolysaccharides (EPSs) play key roles in plant,microbe interactions, such as biofilm formation on plant roots and legume nodulation by rhizobia. Here, we focused on the function of an EPS produced by Rhizobium sp. YAS34 in the colonization and biofilm formation on non-legume plant roots (Arabidopsis thaliana and Brassica napus). Using random transposon mutagenesis, we isolated an EPS-deficient mutant of strain YAS34 impaired in a glycosyltransferase gene (gta). Wild type and mutant strains were tagged with a plasmid-born GFP and, for the first time, the EPS produced by the wild-type strain was seen in the rhizosphere using selective carbohydrate probing with a fluorescent lectin and confocal laser-scanning microscopy. We show for the fist time that Rhizobium forms biofilms on roots of non-legumes, independently of the EPS synthesis. When produced by strain YAS34 wild type, EPS is targeted at specific parts of the plant root system. Nutrient fluctuations, root exudates and bacterial growth phase can account for such a production pattern. The EPS synthesis in Rhizobium sp. YAS34 is not essential for biofilm formation on roots, but is critical to colonization of the basal part of the root system and increasing the stability of root-adhering soil. Thus, in Rhizobium sp. YAS34 and non-legume interactions, microbial EPS is implicated in root,soil interface, root colonization, but not in biofilm formation. [source] Phenotypical variation in a toxic strain of the phytoplankter, Cylindrospermopsis raciborskii (nostocales, cyanophyceae) during batch cultureENVIRONMENTAL TOXICOLOGY, Issue 6 2001Peter R. Hawkins Abstract A nonaxenic strain of Cylindrospermopsis raciborskii Woloszynska (AWT 205) was grown in batch culture, with and without nitrate as the primary N source. Rapid log-phase growth with nitrate was 1.0 doubling/day versus 0.3 doubling/day without nitrate. Cylindrospermopsin (CYN) production was measured by HPLC. The rate of intracellular CYN production matched cell division rate for both the diazotrophies at cell densities less than 107 cell/ml. At cell density >107 cell/ml, additional resource limitation in batch culture slowed log-phase growth to 0.04 division/day and cell division and CYN production decoupled. Intracellular CYN concentration increased at a rate of 0.08 doubling/day, twice the cell division rate. Extracellular CYN as a proportion of the total CYN increased from 20% during the rapid growth phase, to 50% during the slow growth phase. The total CYN yield from cultures grown out to stationary phase (55 days) exceeded 2 mg CYN/l. C. raciborskii cells in log-phase growth, exposed to 1 ppm copper (as copper sulphate), lysed within 24 hours. After copper treatment, all CYN was in the filterable fraction. These findings imply that in naturally occurring blooms of C. raciborskii, the movement of intracellular CYN into solution will be the greatest during stationary phase, when intracellular concentrations are highest and cell lysis is more frequent. The application of algicides that promote cell lysis will exacerbate this effect. © 2001 John Wiley & Sons, Inc. Environ Toxicol 16: 460,467, 2001 [source] Biotransformation of n -hexadecane by cell suspension cultures of Cinchona robusta and Dioscorea compositaENVIRONMENTAL TOXICOLOGY & CHEMISTRY, Issue 12 2001Carolina Vega-Jarquin Abstract This manuscript evaluates the phytotoxicity and biotransformation of n -hexadecane as well as peroxidase activity and cytochrome P450 concentration in microsomes for cell suspension cultures of Cinchona robusta and Dioscorea composita. Phytotoxicity was evaluated based on viability and growth. Cell cultures were exposed to a 2 and 4% (v/v) dose of n -hexadecane. The biotransformation of n -hexadecane was determined based on labeled recovery in polar, nonpolar, and cell residue fractions after cell culture extraction during exponential cell growth phase and stationary phase. Differences were observed in accumulation of label during cell growth phase and stationary phase for the cells of the two plants. Differences also were observed between phases for label in polar and nonpolar fractions. Thin-layer chromatography determined labeled intermediates and some were identified. The activity of peroxidase and concentration of cytochrome P450 was lower in C. robusta than in controls and greater in D. composita than in controls. In vitro biotransformation was not successful. [source] Synthesis of Monodisperse Silica Nanoparticles Dispersable in Non-Polar Solvents,ADVANCED ENGINEERING MATERIALS, Issue 5 2010Eoin Murray Three synthetic routes to hydrophobic silica nanoparticles are compared in this paper. First, the established synthetic method based on the Stöber process was examined. Monodisperse colloidal silica particles with diameters of 15,25,nm were prepared via the hydrolysis of tetraethyl orthosilicate (TEOS) by aqueous ammonia in ethanol. The surfaces of these particles were rendered hydrophobic with octadecyltrimethoxysilane (ODTMS) after the reaction or, more conveniently, during the growth phase. Secondly, silica particles with diameters of 15,50,nm were prepared using a one-pot synthesis in which TEOS was hydrolyzed by an amino acid and the resulting particles were coated with ODTMS. Lastly a novel, direct approach to the synthesis of hydrophobic organosilica nanoparticles was developed using ODTMS as the single silica source. Hydrolysis of the ODTMS by aqueous ammonia in ethanol yielded monodisperse colloidal organosilica particles with diameters of 15,30,nm. [source] Short and long germ segmentation: unanswered questions in the evolution of a developmental modeEVOLUTION AND DEVELOPMENT, Issue 6 2005Paul Z. Liu Summary The insect body plan is very well conserved, yet the developmental mechanisms of segmentation are surprisingly varied. Less evolutionarily derived insects undergo short germ segmentation where only the anterior segments are specified before gastrulation whereas the remaining posterior segments are formed during a later secondary growth phase. In contrast, derived long germ insects such as Drosophila specify their entire bodies essentially simultaneously. These fundamental embryological differences imply potentially divergent molecular patterning events. Numerous studies have focused on comparing the expression and function of the homologs of Drosophila segmentation genes between Drosophila and different short and long germ insects. Here we review these comparative data with special emphasis on understanding how short germ insects generate segments and how this ancestral mechanism may have been modified in derived long germ insects such as Drosophila. We break down the larger issue of short versus long germ segmentation into its component developmental problems and structure our discussion in order to highlight the unanswered questions in the evolution of insect segmentation. [source] Initiation and early growth of fatigue cracks in an aerospace aluminium alloyFATIGUE & FRACTURE OF ENGINEERING MATERIALS AND STRUCTURES, Issue 2 2002S. A. Barter Abstract Material imperfections usually play a substantial role in the early stages of fatigue cracking. This article presents some observations concerning fatigue crack initiating flaws and early crack growth in 7050-T7451 aluminium alloy specimens and in full-scale fatigue test articles with a production surface finish. Equivalent initial flaw size (EIFS) approaches used to evaluate the fatigue implications of metallurgical, manufacturing and service-induced features were refined by using quantitative fractography to acquire detailed information on the early crack growth behaviour of individual cracks; the crack growth observations were employed in a simple crack growth model developed for use in analysing service crack growth. The use of observed crack growth behaviour reduces the variability which is inherent in EIFS approaches which rely on modelling the whole of fatigue life, and which can dominate EIFS methods. The observations of realistic initial flaws also highlighted some of the significant factors in the fatigue life-determining early fatigue growth phase, such as surface treatment processes. Although inclusions are often regarded as the single most common type of initiating flaw, processes which include etching can lead to etch pitting of grain boundaries with significant fatigue life implications. [source] Quantitative modeling of triacylglycerol homeostasis in yeast , metabolic requirement for lipolysis to promote membrane lipid synthesis and cellular growthFEBS JOURNAL, Issue 22 2008Jürgen Zanghellini Triacylglycerol metabolism in Saccharomyces cerevisiae was analyzed quantitatively using a systems biological approach. Cellular growth, glucose uptake and ethanol secretion were measured as a function of time and used as input for a dynamic flux-balance model. By combining dynamic mass balances for key metabolites with a detailed steady-state analysis, we trained a model network and simulated the time-dependent degradation of cellular triacylglycerol and its interaction with fatty acid and membrane lipid synthesis. This approach described precisely, both qualitatively and quantitatively, the time evolution of various key metabolites in a consistent and self-contained manner, and the predictions were found to be in excellent agreement with experimental data. We showed that, during pre-logarithmic growth, lipolysis of triacylglycerol allows for the rapid synthesis of membrane lipids, whereas de novo fatty acid synthesis plays only a minor role during this growth phase. Progress in triacylglycerol hydrolysis directly correlates with an increase in cell size, demonstrating the importance of lipolysis for supporting efficient growth initiation. [source] Existence of a tightly regulated water channel in Saccharomyces cerevisiaeFEBS JOURNAL, Issue 2 2001Valérie Meyrial The Saccharomyces cerevisiae strain ,1278b possesses two putative aquaporins, Aqy1-1p and Aqy2-1p. Previous work demonstrated that Aqy1-1p functions as a water channel in Xenopus oocyte. However, no function could be attributed to Aqy2-1p in this system. Specific antibodies were used to follow the expression of Aqy1-1p and Aqy2-1p in the yeast. Aqy1-1p was never detected whatever the growth phase and culture conditions tested. In contrast, Aqy2-1p was detected only during the exponential growth phase in rich medium containing glucose. Aqy2-1p expression was repressed by hyper-osmotic culture conditions. Both immunocytochemistry and biochemical subcellular fractionation demonstrated that Aqy2-1p is located on the endoplasmic reticulum (ER) as well as on the plasma membrane. In microsomal vesicles enriched in ER, a water channel activity due to Aqy2-1p was detected by stopped-flow analysis. Our results show that the expression of aquaporins is tightly controlled. The physiological relevance of aquaporin-mediated water transport in yeast is discussed. [source] Identification of a new promoter for the response regulator rcsB expression in Salmonella enterica serovar TyphimuriumFEMS MICROBIOLOGY LETTERS, Issue 2 2009María de las Mercedes Pescaretti Abstract The RcsCDB (Rcs) phosphorelay system regulates capsule synthesis, flagella production and other cellular activities in several enteric bacteria. This system consists of three proteins: the sensor RcsC, the cognate response regulator RcsB and the histidine-containing phosphotransfer protein RcsD (YojN), which is hypothesized to act as an intermediary in the phosphotransfer from RcsC to RcsB. The rcsC gene is convergently transcribed toward rcsB, which follows rcsD in what appears to be a two-gene operon. Here, it is reported that the overproduction of the rcsB gene represses rcsD transcription, but has a weak effect on its own expression. We demonstrated that the differential rcsD and rcsB expression is due to the activity of two promoters to transcribe the rcsB gene: (1) PrcsDB located upstream of rcsD and (2) PrcsB located within the rcsD coding region. In addition, here it was demonstrated that in Salmonella typhimurium, PrcsB is important to activate the rcsB expression during the stationary growth phase. [source] Genome-wide expression analysis of iron regulation in Burkholderia pseudomallei and Burkholderia mallei using DNA microarraysFEMS MICROBIOLOGY LETTERS, Issue 2 2005Apichai Tuanyok Abstract Burkholderia pseudomallei and B. mallei are the causative agents of melioidosis and glanders, respectively. As iron regulation of gene expression is common in bacteria, in the present studies, we have used microarray analysis to examine the effects of growth in different iron concentrations on the regulation of gene expression in B. pseudomallei and B. mallei. Gene expression profiles for these two bacterial species were similar under high and low iron growth conditions irrespective of growth phase. Growth in low iron led to reduced expression of genes encoding most respiratory metabolic systems and proteins of putative function, such as NADH-dehydrogenases, cytochrome oxidases, and ATP-synthases. In contrast, genes encoding siderophore-mediated iron transport, heme-hemin receptors, and a variety of metabolic enzymes for alternative metabolism were induced under low iron conditions. The overall gene expression profiles suggest that B. pseudomallei and B. mallei are able to adapt to the iron-restricted conditions in the host environment by up-regulating an iron-acquisition system and by using alternative metabolic pathways for energy production. The observations relative to the induction of specific metabolic enzymes during bacterial growth under low iron conditions warrants further experimentation. [source] Characterisation of preYvaY export reveals differences in the substrate specificities of Bacillus subtilis and Escherichia coli leader peptidasesFEMS MICROBIOLOGY LETTERS, Issue 1 2003Dirk Linde Abstract Translocation, processing and secretion of YvaY, a Bacillus subtilis protein of unknown function, were characterised both in B. subtilis and in Escherichia coli. In its natural host B. subtilis, YvaY was transiently synthesised at the end of the exponential growth phase. It was efficiently secreted into the culture supernatant in spite of a calculated membrane spanning domain in the mature part of the protein. In E. coli, despite the high conservation of Sec-dependent transport components, processing of preYvaY was strongly impaired. To uncover which elements of E. coli and B. subtilis translocation systems are responsible for the observed substrate specificity, components of the B. subtilis Sec-system were co-expressed besides yvaY in E. coli. Expression of B. subtilis secA or secYEG genes did not affect processing, but expression of B. subtilis signal peptidase genes significantly enhanced processing of preYvaY in E. coli. While the major signal peptidases SipS or SipT had a strong stimulatory effect on preYvaY processing, the minor signal peptidases SipU, SipV or SipW had a far less stimulatory effect in E. coli. These results reveal that targeting and translocation of preYvaY is mediated by the E. coli Sec proteins but processing of preYvaY is not performed by E. coli signal peptidase LepB. Thus, differences in substrate specificities of E. coli LepB and the B. subtilis Sip proteins provide the bottleneck for export of YvaY in E. coli. Significant slower processing of preYvaY in absence of SecB indicated that SecB mediates targeting of the B. subtilis precursor. [source] Role of glutathione metabolism status in the definition of some cellular parameters and oxidative stress tolerance of Saccharomyces cerevisiae cells growing as biofilmsFEMS YEAST RESEARCH, Issue 5 2008Grégoire Gales Abstract The resistance of Saccharomyces cerevisiae to oxidative stress (H2O2 and Cd2+) was compared in biofilms and planktonic cells, with the help of yeast mutants deleted of genes related to glutathione metabolism and oxidative stress. Biofilm-forming cells were found predominantly in the G1 stage of the cell cycle. This might explain their higher tolerance to oxidative stress and the young replicative age of these cells in an old culture. The reduced glutathione status of S. cerevisiae was affected by the growth phase and apparently plays an important role in oxidative stress tolerance in cells growing as a biofilm. [source] A novel gene, ecl1+, extends the chronological lifespan in fission yeastFEMS YEAST RESEARCH, Issue 4 2008Hokuto Ohtsuka Abstract We have identified a novel gene from Schizosaccharomyces pombe that we have named ecl1+ (extender of the chronological lifespan). When ecl1+ is provided on a high-copy number plasmid, it extends the viability of both the ,sty1 MAP kinase mutant and the wild-type cells after entry into the stationary phase. ecl1+ encodes an 80-amino acid polypeptide that had not been annotated in the current database. The ecl1+ -mRNA increases transiently when the growth phase is changed from the log phase to the stationary phase. The Ecl1 protein is localized in the nucleus. Calorie restriction extends the chronological lifespan of wild-type and ,ecl1 cells but not ecl1+ -overproducing cells. The ,pka1 mutant shows little, if any, additional extension of viability when Ecl1 is overproduced. The ste11+ gene that is negatively controlled by Pka1 is up regulated when Ecl1 is overproduced. From these results we propose that the effect of Ecl1 overproduction may be mainly linked to and negatively affects the Pka1-dependent pathway. [source] Effects of fire on surface carbon, energy and water vapour fluxes over campo sujo savanna in central BrazilFUNCTIONAL ECOLOGY, Issue 6 2003A. J. B. Santos Summary 1Tower-based eddy covariance measurements were used to quantify the effect of fire on subsequent carbon dioxide fluxes and water and surface energy balance characteristics for campo sujo savanna located near Brasília in Central Brazil (15°56, S, 47°51, W). Campo sujo is a xeromorphic, open shrub savanna with very scattered but definitely visible shrubs and tree-like shrub elements. We studied two areas, one exposed to a prescribed fire late in the dry season, and a second that had not been burned for the previous 4 years. 2The fire on 22 September 1998 consumed an estimated 26 mol C m,2. Immediately after the fire, evapotranspiration rates decreased and the savanna became a stronger net source of CO2 to the atmosphere. This was attributed to the removal of the still slightly physiologically active grass layer and higher soil CO2 efflux rates as a consequence of elevated surface soil temperatures post-burning. 3On the commencement of the first rains in early October 1998, this situation was reversed, with the burned area rapidly becoming a stronger sink for CO2 and with higher evapotranspiration rates than a nearby unburned (control) area. This difference persisted throughout the wet season (until at least June 1999) and was attributable to greater physiological activity of the regrowing vegetation in the burned area. Early in the growing season, higher soil evaporation rates may also have contributed to faster water use by the previously burned area. 4Overall, we estimate an annual gross primary productivity for the burned area of 135 mol C m,2 year,1, with that for the unburned area being 106 mol C m,2 year,1. Estimated ecosystem respiration rates were more similar on an annual basis (96 and 82 mol C m,2 year,1 for the burned and unburned areas, respectively), giving rise to a substantially higher net ecosystem productivity for the previously burned area (38 vs 24 mol C m,2 year,1). 5Stimulation of photosynthetic activity in the rapid post-fire growth phase means that the negative effects of fire on the ecosystem carbon balance were more or less neutralized after only 12 months. [source] Transport of phosphatidylinositol 3-phosphate into the vacuole via autophagic membranes in Saccharomyces cerevisiaeGENES TO CELLS, Issue 6 2008Keisuke Obara Vps34, the sole PtdIns 3-kinase in yeast, is essential for autophagy. Here, we show that the lipid-kinase activity of Vps34 is required for autophagy, implying an essential role of its product PtdIns(3)P. The protein-kinase activity of Vps15, a regulatory subunit of the PtdIns 3-kinase complex, is also required for efficient autophagy. We monitored the distribution of PtdIns(3)P in living cells using a specific indicator, the 2xFYVE domain derived from mammalian Hrs. PtdIns(3)P was abundant at endosomes and on the vacuolar membrane during logarithmic growth phase. Under starvation conditions, we observed massive transport of PtdIns(3)P into the vacuole. This accumulation was dependent on the membrane dynamics of autophagy. Notably, PtdIns(3)P was highly enriched and delivered into the vacuole as a component of autophagosome membranes but not as a cargo enclosed within them, implying direct involvement of this phosphoinositide in autophagosome formation. We also found a possible enrichment of PtdIns(3)P on the inner autophagosomal membrane compared to the outer membrane. Based on these results we discuss the function of PtdIns(3)P in autophagy. [source] Experimental silicification of the extremophilic Archaea Pyrococcus abyssi and Methanocaldococcus jannaschii: applications in the search for evidence of life in early Earth and extraterrestrial rocksGEOBIOLOGY, Issue 4 2009F. ORANGE Hydrothermal activity was common on the early Earth and associated micro-organisms would most likely have included thermophilic to hyperthermophilic species. 3.5,3.3 billion-year-old, hydrothermally influenced rocks contain silicified microbial mats and colonies that must have been bathed in warm to hot hydrothermal emanations. Could they represent thermophilic or hyperthermophilic micro-organisms and if so, how were they preserved? We present the results of an experiment to silicify anaerobic, hyperthermophilic micro-organisms from the Archaea Domain Pyrococcus abyssi and Methanocaldococcus jannaschii, that could have lived on the early Earth. The micro-organisms were placed in a silica-saturated medium for periods up to 1 year. Pyrococcus abyssi cells were fossilized but the M. jannaschii cells lysed naturally after the exponential growth phase, apart from a few cells and cell remains, and were not silicified although their extracellular polymeric substances were. In this first simulated fossilization of archaeal strains, our results suggest that differences between species have a strong influence on the potential for different micro-organisms to be preserved by fossilization and that those found in the fossil record represent probably only a part of the original diversity. Our results have important consequences for biosignatures in hydrothermal or hydrothermally influenced deposits on Earth, as well as on early Mars, as environmental conditions were similar on the young terrestrial planets and traces of early Martian life may have been similarly preserved as silicified microfossils. [source] Responses of gas exchange and growth in Merkus pine seedlings to expected climatic changes in ThailandGLOBAL CHANGE BIOLOGY, Issue 6 2001Jarkko Koskela Abstract Responses of gas exchange and growth in Merkus pine (Pinus merkusii Jungh. et de Vriese) seedlings to changing climate were analysed for high- and low-altitude sites in Thailand. A gas exchange model, based on the optimality approach, derived the effect of drought from the probability of rains. A carbon-and nitrogen-balance growth model applied structural regularities of a tree and a modification of functional balance between foliage and fine roots as growth- guiding rules. Adaptation to local climates was incorporated in the models. The simulations yielded physiologically reasonable behaviour for annual photosynthesis (A) and transpiration (E) in relation to the distributions of precipitation over the course of a year. An annual temperature increase of 2 °C and a prolonged dry season (scenario 2) reduced A by 5,11% and E by 5,8% as compared to present climate (scenario 1). Doubled CO2 concentration and the increased temperature (scenario 3) enhanced A by 56,59% and E by 14%. Simultaneously these changes (scenario 4) increased A by 41,53% and E by 1,5%. Simulated growth in scenario 1 fitted reasonably well to field data. By the age of five years, simulated total biomass (TB) and height (h) were reduced by 31,67% and 12,42%, respectively, in scenario 2 compared to scenario 1. In scenario 3, TB and h increased by 279,330% and 94,191%, and in scenario 4, by 83,241% and 55,69%, respectively. Large increases in TB and h are explained by the exponential growth phase of the young seedlings. These results suggest that climatic changes enhance growth and thus shorten the duration of the grass stage in these seedlings. However, the effects of climatic changes on growth depend strongly on how rainfall seasonality is altered in SE Asia because prolonged drought episodes may retard the fertilizing effects of the increasing CO2 concentration. [source] Vegetative growth and development of irrigated forage turnip (Brassica rapa var. rapa)GRASS & FORAGE SCIENCE, Issue 4 2008J. E. Neilsen Abstract Field and greenhouse experiments were conducted to identify visual markers and predictors of changes in the vegetative growth rate of forage turnip (Brassica rapa var. rapa) as a potential tool to improve the timing of inputs of N and irrigation to periods of maximum demand. The onset of root expansion, which was associated with a colour change and the death of cotyledons, was identified as a critical marker for the beginning of the rapid growth of the crop and the accumulation of starch in the storage root but indicators of subsequent changes in vegetative growth rate were not identifiable. The results suggested that management inputs can be more readily targeted to the beginning of the exponential growth phase but targeting of later vegetative growth stages will remain arbitrary. The vegetative growth and development of the crop was also studied to elucidate the process of leaf emergence and senescence (turnover) as they affected both leaf and root yield. The sequential senescence of leaves, which began immediately after cotyledon death, and translocation of carbohydrate to the storage root, coupled with high leaf area index (LAI), probably account for the high growth rates of 220 kg ha,1 day,1 maintained for periods of 10 weeks after the onset of root expansion. High yields can be expected if high LAI is maintained by ensuring that leaf emergence rates are not limited by nutrient or water deficiencies and leaves are protected from insect pests. Forage turnip is particularly robust because new leaf continues to emerge as older and damaged leaves senesce and carbohydrate is stored as starch in the storage root. [source] Immunohistochemistry in melanocytic proliferative lesionsHISTOPATHOLOGY, Issue 6 2004N J W De Wit Melanoma incidence is rising worldwide. Early diagnosis is very important, as the most effective treatment for melanoma still consists of excision of the tumour before onset of the metastatic growth phase. Immunohistochemistry is a valuable tool for (dermato)pathologists to aid establishing diagnosis. Melanoma markers can be classified into two main categories: melanocytic differentiation markers and melanoma progression markers. Melanocytic differentiation markers are mostly used to distinguish poorly differentiated melanomas from non-melanocytic tumours and for staging of melanocytic proliferative lesions. Melanoma progression markers are most suitable to determine the level of malignancy and/or aggressiveness of tumour cells. This review describes the classification of melanoma markers, including commonly used and recently identified antigens with potential marker function. We characterize their expression profile in melanocytic proliferative lesions and their potential usefulness for diagnosis, prognosis, microstaging, immunotherapeutic purposes and evaluation of therapies. [source] Different ties for different needs: Recruitment practices of entrepreneurial firms at different developmental phasesHUMAN RESOURCE MANAGEMENT, Issue 4 2003Aegean Leung Entrepreneurial firms face significant challenges in attracting and acquiring needed human resources. That is, in addition to difficulties associated with resource constraints and organization legitimacy, the requirements for "person-organization fit" change substantially as these firms transit from start-up to growth phase. This study examines how entrepreneurial firms tap evolving social network ties in order to address "needs-and-fits" issues across different developmental stages of the firm. The findings go beyond what "strength of weak ties" and "structural hole" theories would suggest, and highlight the persistent use of strong and direct ties across developmental phases. © 2004 Wiley Periodicals, Inc. [source] Growth of the tufted-tailed ratINTEGRATIVE ZOOLOGY (ELECTRONIC), Issue 4 2007Vololomboahangy R. RANDRIANJAFY Abstract Eliurus myoxinus (Rodentia: Nesomyidae, Nesomyinae) is one of the four species of endemic Malagasy rodents known to exist in the Ankarafantsika National Park, northwestern Madagascar. In order to study growth parameters and to determine at which age E. myoxinus commences breeding, we used two different techniques: captive breeding and a capture-mark-release field program in the species' natural habitat. The data collected on the breeding of E. myoxinus in captivity demonstrated that females can give birth to a litter of up to four pups, with up to four litters per calendar year. Reproduction of E. myoxinus was more likely to be continuous in captivity than under natural habitat conditions. If parturition failed, then post-partum mating occurred. Pups had a rapid linear growth phase from birth until 1 month of age. Between 1.5 and 2 months of age, the growth rate continued to increase, but then decreased at around the time of weaning, which occurred by 3.5 months of age. The successive maximum method of age determination showed that individuals at the "young" stage had an average body length of 90 mm and a weight of 30 g and were between 1.5 and 2 months old. The greatest variation in measurements of juveniles occurred at the age of 3.5 months. At this stage, sub-adults resembled adults but their external genitalia were not well developed. Individuals were classified as adults if they had reached a body length of 110 mm and a body weight of 40 g. This occurred at more than 4.5 months of age when the animals were generally reproductively active. The Vo n Bertalanffy method indicated that individuals reach the adult stage by 6 to 7 months. Males grew more rapidly than females, reaching adulthood by 5.5 months of age, whereas females only reached adulthood several weeks later. This species is polygamous. The sex ratio of pups at birth favored females by approximately 3:1. The higher proportion of female pups at birth may represent a survival strategy of this species, possibly associated with ecological conditions. [source] Id1 expression is transcriptionally regulated in radial growth phase melanomasINTERNATIONAL JOURNAL OF CANCER, Issue 8 2007Byungwoo Ryu Abstract Id genes have been demonstrated to be upregulated in a wide variety of human malignancies and their expression has been correlated with disease prognosis; however, little is known about the mechanisms of Id gene activation in tumors. We have previously shown that the helix-loop-helix transcription factor, Id1, is highly expressed in primary human melanomas during the radial growth phase and that Id1 is a transcriptional repressor of the familial melanoma gene CDKN2A. Here we use a series of melanoma cell lines that recapitulate the phenotypic characteristics of melanomas at varying stages of malignant progression to evaluate the expression levels of Id1 in this model system and determine the mechanism of Id1 dysregulation in these tumor cells. We find elevated protein levels of Id1 to be present consistently in radial growth phase tumor cells in accordance with our primary tumor data. Id1 transcript levels were also found to be elevated in these radial growth phase melanoma cells without any appreciable evidence of gene amplification and Id1 promoter activity was found to correlate with Id expression levels. We therefore conclude that Id1 expression is primarily regulated at the transcriptional level in radial growth phase melanomas and expect that therapies that target Id1 gene expression may be useful in the treatment of Id-associated malignancies. © 2007 Wiley-Liss, Inc. [source] Transport of Mitochondria During AxonogenesisIUBMB LIFE, Issue 6 2000Vadim N. Dedov Abstract The cellular mechanisms involved in axonogenesis are still unclear. In the present work we found that formation of neurites in cultured neonatal dorsal root ganglion neurons co-incided with the redistribution of highly charged mitochondria. Radially distributed in subplasmalemmal space 3 h after plating, highly charged mitochondria formed clusters in the hillocks of predominant neurites during the next 24?48 h and then redistributed into the axons. These results provide evidence that accumulation of a critical mass of charged mitochondria at the site of the future axonal hillock may represent the slow initiation stage of axonogenesis, followed by a fast growth phase. [source] Insulin-like growth factor I in growing thoroughbredsJOURNAL OF ANIMAL PHYSIOLOGY AND NUTRITION, Issue 9-10 2007W. B. Staniar Summary The objective of this longitudinal study was to characterize growth and plasma insulin-like growth factor I (IGF-I) concentrations in pasture-raised thoroughbreds fed two sources of dietary energy. Mares and foals were randomly assigned to either a sugar and starch (SS) or fat and fibre (FF)-rich feed, and plasma IGF-I and growth were measured once a month from 1 to 16 months of age. These dependent variables were also compared with day length and ambient temperature. There was an association between plasma IGF-I concentration and average daily gain (ADG) (r = 0.32, p < 0.001). There were also clear seasonal patterns in both ADG and plasma IGF-I, with high values in June and May, and a low value in March. Plasma IGF-I and ADG were positively associated with day length and temperature. Plasma IGF-I was never higher (p > 0.10) in the FF group when compared with the SS group, and was higher in the SS group during a rapid growth phase in the spring of year 2 (p < 0.10). The results establish an association between ADG and IGF-I in the horse and indicate that environment and age may influence this relationship. In addition, plasma IGF-I is influenced by dietary energy source at particular times of year. This link has important implications in designing feeding management strategies that are aimed at addressing skeletal development. [source] Beneficial links for the control of aphids: the effects of compost applications on predators and preyJOURNAL OF APPLIED ECOLOGY, Issue 4 2008James R. Bell Summary 1Polyphagous predators, such as spiders and beetles, perform a fundamental ecosystem service as regulators of agricultural pests, particularly aphids. They are most effective when they colonize the crop before the pest has reached its exponential growth phase. However, this is also when predators find themselves in a state of near-starvation. 2Predator numbers can be enhanced by applications of different types of organic matter, but the mechanism is not clearly understood. One hypothesis is that compost applied to the field may introduce a new detrital food chain to maintain predators until the pest arrives, but this may also be detrimental to effective pest control, fostering a surplus of alternative prey and causing a switch away from the pest. To elucidate these possible outcomes, we report on the use of within-field compost applications on aphids and their predators, presenting 4 years of field-scale manipulations. 3We found both direct and indirect links between compost, aphids and predators. In years when compost-treated plots had significantly higher numbers of predators, aphids were in significantly lower numbers than in plots without compost. Conversely, when there was a lack of response by predators, aphid numbers showed similar trends in all treatments. 4In all years, alternative prey responded strongly to compost application and did not fluctuate at the level shown by predators, suggesting that these two prey groups were decoupled. Instead, the predicted positive feedback of compost on predators numbers was either weak or absent. 5Synthesis and applications. The effect of compost on aphids clearly requires further practical refinement if it is to provide constant pest suppression, making it difficult to provide specific management recommendations at this stage. In the short term, compost application may not always confer immediate benefits in terms of pest control alone but this must be set against other better known benefits (moisture retention, nutrients). In the long term, experiments measuring the full trophic pathway are needed to unravel the effects of organic matter type, application time and the siting of compost relative to the crop in order to optimise pest suppression potential. [source] Reproductive features of the non-native Siganus luridus (Teleostei, Siganidae) during early colonization at Linosa Island (Sicily Strait, Mediterranean Sea)JOURNAL OF APPLIED ICHTHYOLOGY, Issue 6 2007E. Azzurro Summary In July 2003, the finding of a newly settled population of Siganus luridus at Linosa Island (Sicily Strait, Mediterranean Sea) gave us the unusual opportunity to examine the reproductive condition of a Lessepsian migrant during early phases of colonization. Aspects of gonad morphology, fecundity, atresia and oocyte dynamics were investigated by using 43 pioneer specimens collected in concomitance with their first record in the Pelagie Islands. Ovarian development was consistent with the group-synchronous type, and testicular organization was of the unrestricted spermatogonial testis type, with cystic spermatogenesis. Both males and females had reached final stages of gonad maturation. The rates of follicular atresia were moderate: out of 17 adult females, 10 individuals did not present atretic oocytes; six exhibited <15.1% of secondary growth phase (SGP) oocytes in , -atresia, while one female presented 45.7% of SGP in , -atresia. Fecundity estimates did not diverge from what was observed in a reference population along the Lebanese coast. Absolute fecundity ranged from 115 739 to 740 433 oocytes per female (16.5,24.5 cm LT). Relative fecundity ranged from 1239 to 3162 oocytes g,1, with a mean of 1885 ± 868 oocytes g,1. Our observations indicated that these early settled siganids are reproductively active at Linosa and suggested the forthcoming of self-maintaining populations across the central Mediterranean area. [source] Application of otolith microchemistry to estimate the migratory history of Japanese eel Anguilla japonica on the Sanriku Coast of JapanJOURNAL OF APPLIED ICHTHYOLOGY, Issue 2 2004A. Kotake Summary The age and migratory history of the Japanese eel, Anguilla japonica Temminck & Schlegel, collected in Miyako Bay along the Sanriku coast of Japan, was examined using the otolith microstructure and analysis of strontium (Sr) and calcium (Ca) concentrations conducted with wavelength dispersive X-ray spectrometry by an electron microprobe. The line analysis of Sr : Ca ratios along the life history transect of each otolith showed a peak (ca. 15,17 × 10,3) which corresponded with the period of their leptocephalus and early glass eel stages in the ocean. The mean Sr : Ca ratios from the elver mark to the otolith edge indicated that there were eels with several general categories of migratory history, including sea eels that never entered freshwater (average Sr : Ca ratios, ,6.0 × 10,3), and others that entered freshwater for brief periods but returned to the estuary or bay. This evidence of the occurrence of sea eels in this northern area indicates that Japanese eels of the Sanriku coast do not necessarily migrate into freshwater rivers during recruitment as do glass eels at the beginning of their growth phase; even those that do enter freshwater may later return to the marine environment. Thus, anguillid eel migrations into freshwater are clearly not an obligatory migratory pathway, but rather a facultative catadromy with seawater or estuarine residents as an ecophenotype. [source] | ||||||||||||||||||||||||||||||||||||||||