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Growth Experiments (growth + experiment)
Selected AbstractsIsolation and characterization of a Lactobacillus amylovorus mutant depleted in conjugated bile salt hydrolase activity: relation between activity and bile salt resistanceJOURNAL OF APPLIED MICROBIOLOGY, Issue 4 2000J.P. Grill Growth experiments were conducted on Lactobacillus amylovorus DN-112 053 in batch culture, with or without pH regulation. Conjugated bile salt hydrolase (CBSH) activity was examined as a function of culture growth. The CBSH activity increased during growth but its course depended on bile salts type and culture conditions. A Lact. amylovorus mutant was isolated from the wild-type strain of Lact. amylovorus DN-112 053 after mutagenesis with N-methyl-N,-nitro-N-nitrosoguanidine. An agar plate assay was used to detect mutants without CBSH activity. In resting cell experiments, the strain showed reduced activity. Differences between growth parameters determined for wild-type and mutant strains were not detected. Comparative native gel electrophoresis followed by CBSH activity staining demonstrated the loss of proteins harbouring this activity in the mutant. Four protein bands corresponding to CBSH were observed in the wild-type strain but only one was detected in the mutant. The specific growth rate of the mutant strain was affected more by bile salts than the wild-type strain. Nevertheless, bile was more toxic for the wild-type strain. In viability studies in the presence of nutrients, it was demonstrated that glycodeoxycholic acid exerted a higher toxicity than taurodeoxycholic acid in a pH-dependent manner. No difference was apparent between the two strains. In the absence of nutrients, the wild-type strain died after 2 h whereas no effect was observed for the mutant. The de-energization experiments performed using the ionophores nigericin and valinomycin suggested that the chemical potential of protons (Z,pH) was involved in Lactobacillus bile salt resistance. [source] In vitro activity of a cytotoxic factor isolated from human leukocytes,APMIS, Issue 6 2006CARL FREDRIK NAESS-ANDRESEN The aim of the present study was to test the in vitro antimicrobial properties of a cytotoxic factor isolated from human leukocytes and for an effect on DNA synthesis. A microdilution broth method was used to determine MIC values for fungi and bacteria. Flow cytometry was used to examine the effect on DNA synthesis. The MIC values for fungi were in the range 1,128 ,g CF/mL and concentrations 2,4 times the MIC were fungicidal. CF had no effect on bacteria (MIC and MBC values > 1024 ,g CF/mL). Growth experiments performed with increasing concentration of CF showed a dose-dependent effect on growth of the yeasts tested. We confirmed that zinc ions could abrogate the antiproliferative effect of CF. Flow cytometric experiments showed that CF had no effect on the cell cyclus. The present study shows that this endogenous substance isolated from human leukocytes has growth inhibitory properties towards fungi. Because of the origin from human leukocytes, CF may have a role in the non-specific defense against fungal infections. The use of CF may potentially have a role in the treatment of infections caused by fungi. Further investigations to characterize CF chemically and to study the antifungal mechanism are necessary. [source] Welche Bedeutung hat die sexuelle Reproduktion für den Erfolg der Art Calamagrostis epigejos (L.) Roth?FEDDES REPERTORIUM, Issue 3-4 2003A. Grüttner Dr. Als Quellen der Variabilität im Potential der sexuellen Reproduktion fanden sich Unterschiede in der Keimungsgeschwindigkeit (entspelzte Karyopsen keimten rascher und synchroner), bei den Keimraten und vor allem bei der Zahl keimfähiger Diasporen pro Rispe. Von den anderen abweichend zeigten kleine isolierte Bestände geringere Keimraten und brachten , wohl bedingt durch Selbstinkompatibilität , kaum keimfähige Diasporen hervor. Bei gezielter Suche fanden sich Keimlinge auf offenen, zumindest leicht tonhaltigen Rohböden. Das Wachstum der Keimlinge stagnierte und keiner von über 6000 überlebte bis zum nächsten Jahr. Da Bewässerung die Entwicklung auf dem selben Substrat sehr förderte, war offenbar Wassermangel für das geringe Wachstum ausschlaggebend. Die erfolgreiche generative Etablierung ist also auf den Zufall günstiger Witterungsphasen oder Standorte angewiesen. Auch im Frühjahr waren noch keimfähige Diasporen in aufrechten Rispen nachweisbar, sodass sich der Diasporenfall mehr oder weniger über das gesamte Jahr erstreckt. Im Zusammenspiel mit dem Fehlen von Dormanz ermöglicht das die Nutzung nicht vorhersagbarer günstiger Witterungsphasen. Bei einem Kulturversuch kamen einzelne Individuen auch mit schwierigen Substraten gut zurecht, auf denen die Mehrzahl kümmerte. Danach ergibt sich die standörtliche Breite der Art C.,epigejos als Summe sehr unterschiedlicher Reaktionsnormen der Individuen. Die angeführten Befunde unterstreichen insgesamt die Bedeutung der sexuellen Reproduktion und der genetischen Diversität für den Erfolg der Art. Is sexual reproduction important to the success of Calamagrostis epigejos (L.) Roth? Calamagrostis epigejos is very common in Central Europe and occupies an extraordinary wide range of habitats. As up to now nearly no reports exist on spontaneous seedling emergence, we aimed to investigate several aspects of sexual reproduction, thereby refering to contrasting habitat types. Components in the variability of the potential of sexual reproduction were differences in germination speed and rates and, above all, number of germinable seeds per panicle. Unlike the others, small isolated stands produced very low numbers of germinable seeds, probably caused by selfincompatibility. Our search for seedlings was successful at several sites , all distinguished by raw soil, a certain clay content, and little cover of vegetation and plant litter. The seedlings grew very slowly and none of more than 6000 survived the first year. Additional water enabling much better growth indicates the necessity of favorable weather or favorable habitats (with constant water supply) for successful seedling establishment. Seed dispersal nearly all around the year, combined with the lack of dormancy, allows to make use of the unpredictable opportunities of suitable weather periods. A growth experiment on different substrates demonstrated: the more extreme the conditions, the more differentiated the amount of biomass achieved by each of 20 genets. Some genets grew well even on substrates where most others stagnated. This outcome suggests the wide range of habitats covered by C. epigejos to be the result of the genetic diversity, which in turn is maintained by sexual reproduction and avoidance of inbreeding. [source] Plasticity of clonal integration in the perennial herb Linaria vulgaris after damageFUNCTIONAL ECOLOGY, Issue 3 2006K. HELLSTRÖM Summary 1Clonal integration in plants can improve their ability to cope with habitat heterogeneity. Integration may increase in response to damage, such as herbivore attack, if undamaged ramets support damaged ones. To test this, we studied the effects of apex removal and substantial defoliation on the performance of the clonal perennial herb Linaria vulgaris Mill. in a common-garden growth experiment and a 13C-labelling study. 2In the growth experiment, contrary to expectations, the target ramet could compensate for damage better when the other ramets in the clone were also damaged, indicating within-clone competition for resources rather than support to damaged ramets. 3In the 13C-labelling experiment, 5·7% of the label moved to a neighbour ramet in controls. Apex removal resulted in a negative net translocation of 13C in the damaged ramet, but defoliation led to zero net translocation. 4The observed lack of support to damaged ramets in Linaria suggests that plasticity of clonal integration in this species includes competition between sibling ramets. Although young ramets may be supported, resources are not directed towards a single damaged ramet if there are more viable intact ramets in the clone. Our main results are consistent with the notion that resource allocation among ramets depends on their relative value in terms of expected fitness profits in heterogeneous environments. [source] Nutritional value of cannibalism and the role of starvation and nutrient imbalance for cannibalistic tendencies in a generalist predatorJOURNAL OF ANIMAL ECOLOGY, Issue 1 2006DAVID MAYNTZ Summary 1Cannibalism is considered an adaptive foraging strategy for animals of various trophic positions, including carnivores. However, previous studies on wolf spiders have questioned the high nutritional value of cannibalism. We therefore analysed two different aspects of nutritional quality of conspecifics in the wolf spider Pardosa prativaga: their value for survival, growth and development; and the growth efficiency of feeding on conspecifics. We also measured the propensity for cannibalistic attacks and the consumption rate of conspecifics in an experiment where hunger level and nutrient balance were manipulated. In all experiments, cannibalism was compared with predation on fruit flies as control prey. 2The growth experiment gave ambiguous results regarding the nutritional quality of conspecifics. Spiders on pure cannibalistic diets split into two distinct groups, one performing much better and the other much worse than spiders on fruit fly diets. We discuss the possibility that the population is dimorphic in its cannibalistic propensity, with the latter group of individuals showing a high level of inhibition against cannibalistic attacks in spite of a high nutritional value of cannibalism. 3The food utilization experiment confirmed the high nutritional quality of conspecifics, as cannibalistic spiders had the same growth rate as spiders fed insect prey in spite of a much lower consumption rate. 4Inhibition against cannibalistic attacks was demonstrated in medium-sized juveniles: only half of the spiders attacked a prescribed victim of 50% the size of their opponents, and the latency for those that did attack was more than half an hour, compared with a few minutes for spiders fed fruit flies. 5Nutrient-imbalanced spiders utilized an alternative insect diet less efficiently than balanced spiders, whereas no difference was present in efficiency of utilizing conspecifics. This result indicates that spiders can remedy at least part of a nutrient imbalance through cannibalism. 6As spiders can escape nutritional imbalance as well as restore energy reserves through cannibalism, we predicted both nutrient imbalance and hunger to stimulate cannibalism. This prediction was confirmed only with respect to hunger. Nutrient-imbalanced spiders had reduced cannibalistic consumption, perhaps due to lowered predatory aggressiveness as a result of bad condition. [source] Concentration of copper, iron, manganese and zinc in muscle, fat and bone tissue of lambs of the breed German Merino Landsheep in the course of the growing period and different feeding intensitiesJOURNAL OF ANIMAL PHYSIOLOGY AND NUTRITION, Issue 3-4 2007G. Bellof Summary A growth experiment with 108 lambs (breed German Merino Landsheep) was carried out in order to examine how gender, body weight and feeding intensity affect trace element concentrations in tissues and carcass. The lambs (50% male and 50% female) were fattened at three levels of feeding intensity (,low', ,medium' and ,high' by varying daily amounts of concentrate and hay) and slaughtered at different final body weights (30, 45 or 55 kg). Six male and six female animals were sacrificed at 18 kg live weight at the beginning of the comparative slaughter experiment. The left half carcass of each animal was divided into muscle tissue, fat tissue as well as bones and sinews and analysed for the trace elements copper (Cu), iron (Fe), manganese (Mn) as well as zinc (Zn). The body weight level influenced the Zn concentrations significantly in all tissues. In addition, the Fe concentration in the fat tissue was influenced by the body weight as well as the Cu content in the bone tissue. An influence due to gender could be seen for the Zn concentration in the muscle and fat tissue and for the Fe content in the fat and bone tissue as well as for the Cu concentration in the bones. The feeding intensity affected the Cu content in the muscle and bone tissue and also the Zn content in the muscle tissue. In the present study with lambs at body weight range from 18 to 55 kg on an average, 127 mg Fe, 87 mg Zn, 1.5 mg Cu as well as 1.1 mg Mn per kilogram dry matter were found in the bone tissue. In lamb muscle tissue combined from all parts (body weight range from 18 to 45 kg, both genders) the highest concentrations were for Zn and Fe [3.42 and 1.31 mg/100 g meat (wet weight basis)], while Cu remained far below these levels (0.08 mg/100 g meat and Mn was even below the detection limit of 0.025 mg/kg). Lamb muscle is a valuable source for highly available haem-Fe as well as for Zn and Cu in human nutrition. [source] Nutritional evaluation of various plant protein sources in diets for Asian sea bass Lates calcariferJOURNAL OF APPLIED ICHTHYOLOGY, Issue 2 2000By P. S. Eusebio A biological assay was conducted to evaluate the suitability of various leguminous seed meals and leaf meals as dietary protein sources for Asian sea bass, Lates calcarifer. In the growth experiment, fish (initial mean weight ±,standard error (SE) of 3.8 ± 0.5 g) were fed isonitrogenous and isocaloric diets containing test ingredients to replace 13,18% of the diet. The same diet formulations were used in a digestibility experiment, except that 1% Cr2O3 was added as an external indicator. The growth of the control fish was comparable to fish fed leguminous seed meal-based diets, and better than those given leaf meal-based diets. The control diet had the highest apparent protein digestibility (APD) value. No significant differences were observed between the APD of white cowpea (Vigna unguiculata), green mungbean (V. radiata) and papaya (Carica papaya) leaf meal-based diets. However, the cassava (Manihot esculenta) leaf meal-based diet had the lowest APD value. The present findings suggest that white cowpea and green mungbean meals can be used as protein sources in practical diets to replace 18% of the sea bass diet without affecting their growth. [source] Atom Transfer Radical Polymerization of Glycidyl Methacrylate: A Functional MonomerMACROMOLECULAR CHEMISTRY AND PHYSICS, Issue 16 2004Pedro Francisco Cañamero Abstract Summary: A detailed investigation of the polymerization of glycidyl methacrylate (GMA), an epoxy-functional monomer, by atom transfer radical polymerization (ATRP) was performed. Homopolymers were prepared at relatively low temperatures using ethyl 2-bromoisobutyrate (EBrIB) as the initiator and copper halide (CuX) with N,N,N,,N,,N,-pentamethyldiethylenetriamine (PMDETA) as the catalyst system. The high polymerization rate in the bulk did not permit polymerization control. However, homopolymerization in solution enabled us to explore the effects of different experimental parameters, such as temperature, solvent (toluene vs. diphenyl ether) and initiator concentration, on the controllability of the ATRP process. SEC analysis of the homopolymers synthesized confirmed the importance of solvent character on molecular weight control, the lowest polydispersity indices () and the highest efficiencies being found when the polymerizations were performed in diphenyl ether in combination with a mixed halide technique. A novel poly(glycidyl methacrylate)- block -poly(butyl acrylate) (PGMA- b -PBA) diblock copolymer was prepared through ATRP using PGMA-Cl as a macro-initiator. This chain growth experiment demonstrated a good living character under the conditions employed, while simultaneously indicating a facile synthetic route for this type of functional block copolymer. In addition, the isotacticity parameter for the PGMAs obtained was estimated using 1H NMR analysis which gave a value of ,GMA,=,0.26 in agreement with that estimated in conventional radical polymerization. SEC chromatograms of PGMA-Cl macroinitiator and PGMA- b -PBA diblock copolymer. [source] The decline of metallophyte vegetation in floodplain grasslands: Implications for conservation and restorationAPPLIED VEGETATION SCIENCE, Issue 1 2009Esther C.H.E.T. Lucassen Abstract Question: Which biogeochemical processes are responsible for the decline of endemic metallophyte vegetation in floodplain grasslands? Location: Floodplain grasslands along the River Geul (the Netherlands) and metalliferous mine spoils near the River Geul (Belgium). Methods: In order to find factors and soil processes that have caused a decline of metallophytes and an increase of pseudo-metallophytes in floodplain grasslands, a soil study was done at locations currently and formerly dominated by metallophytes. In addition, changes in soil chemistry in recent decades in floodplain grasslands were investigated. Finally, a 2-year plant growth experiment was performed in the field, to test the effects of improving soil conditions by topsoil removal. Results: Metallophytes only occur on acidic floodplain soils (pH-H2O 5.0-5.5) with relatively high Zn availability (total Zn >40 ,mol g,1; Zn/Ca>0.8; Zn-H2O>59 ,mol kg,1) combined with low phosphate availability (Olsen-P,1250 ,mol kg,1). The Olsen-P and total Ca concentrations were relatively high in topsoil (0-20 cm), while total Zn was high throughout the soil profile (0-50 cm). Removal of topsoil led to recovery of P and Zn availability. Under the new soil conditions there was almost no growth and expansion of pseudo-metalliferous grasses in time, wheras metallophytes easily established, maintained and reproduced with significant increases in cover over time. Conclusions: On a global scale, metallophyte vegetation types are increasingly under threat of extinction. Our study shows that factors leading to higher soil alkalinity inhibit Zn availability at the expense of the metallophyte vegetation. Factors leading to a higher Olsen-P concentration stimulate the growth of more competitive pseudo-metallophyte grasses. Both eutrophication and alkalinisation have contributed to the decline of metallophyte vegetation in floodplains of the River Geul. Removal of the alkaline- and phosphate-enriched soil top layer restores the original soil chemistry and enables re-colonisation by the metallophyte vegetation. The results can be applied in conservation and restoration strategies for such sites. [source] Effects of dietary protein to energy ratios on growth and body composition of juvenile Chinese sucker, Myxocyprinus asiaticusAQUACULTURE NUTRITION, Issue 2 2010Y.C. YUAN Abstract A growth experiment was conducted to investigate effect of dietary protein to energy ratios on growth and body composition of juvenile Myxocyprinus asiaticus (initial mean weight: 10.04 ± 0.53 g, mean ± SD). Nine practical diets were formulated to contain three protein levels (340, 390 and 440 g kg,1), each with three lipid levels (60, 100 and 140 g kg,1), in order to produce a range of P/E ratios (from 22.4 to 32.8 mg protein kJ,1). Each diet was randomly assigned to triplicate groups of 20 fish in 400-L indoors flow-through circular fibre glass tanks provided with sand-filtered aerated freshwater. The results showed that the growth was significantly affected by dietary P/E ratio (P < 0.05). Fish fed the diets with 440 g kg,1 protein (100 and 140 g kg,1 lipid, P/E ratio of 31.43 and 29.22 mg protein kJ,1) had the highest specific growth rates (SGR) (2.16 and 2.27% day,1, respectively). However, fish fed the diet with 390 g kg,1 protein and 140 g kg,1 lipid showed comparable growth (2.01% day,1), and had higher protein efficiency ratio (PER), protein productive value (PPV) and energy retention (ER) than other groups (P < 0.05). No significant differences in survival were found among dietary treatments. Carcass lipid content was positively correlated with dietary lipid level, but irrespective of protein level and inversely correlated with carcass moisture content. Carcass protein contents increased with increasing dietary lipid at each protein level. The white muscle and liver composition showed that lipid increased with increasing dietary lipid level (P < 0.05). Dietary protein concentrations had significant effect on condition factor (CF), hepatosomatic index (HSI) and viscerosomatic index (VSI) (P < 0.05). However, dietary lipid concentrations had no significant effect on CF, HSI (P > 0.05). Based on these observations, 440 g kg,1 protein with lipid from 100 to 140 g kg,1 (P/E ratio of 29.22 to 31.43 mg protein kJ,1) seemed to meet minimum requirement for optimal growth and feed utilization, and lipid could cause protein-sparing effect in diets for juvenile Chinese sucker. [source] Effects of exposure to a 1950 MHz radio frequency field on expression of Hsp70 and Hsp27 in human glioma cellsBIOELECTROMAGNETICS, Issue 4 2005J. Miyakoshi Abstract Human glioma MO54 cells were used to investigate whether radio frequency (RF) field exposure could activate stress response genes. Cells were exposed to continuous wave 1950 MHz or sham conditions for up to 2 h. Specific absorption rates (SARs) were 1, 2, and 10 W/kg. For the cell growth experiment, cell numbers were counted at 0,4 days after exposure. Expression of Hsp27 and Hsp70, as well as the level of phosphorylated Hsp27 (78Ser) protein, was determined by Western blotting. It was found that sham exposed and RF exposed cells demonstrated a similar growth pattern up to 4 days after RF field exposure. RF field exposure at both 2 and 10 W/kg did not affect the growth of MO54 cells. In addition, there were no significant differences in protein expression of Hsp27 and Hsp70 between sham exposed and RF exposed cells at a SAR of 1, 2, or 10 W/kg for 1 and 2 h. However, exposure to RF field at a SAR of 10 W/kg for 1 and 2 h decreased the protein level of phosphorylated Hsp27 (78Ser) significantly. Our results suggest that although exposure to a 1950 MHz RF field has no effect on cell proliferation and expression of Hsp 27 and Hsp70, it may inhibit the phosphorylation of Hsp27 at Serine 78 in MO54 cells. Bioelectromagnetics 26:251,257, 2005. © 2005 Wiley-Liss, Inc. [source] Modeling Growth Rate Dispersion in Industrial CrystallizersCHEMICAL ENGINEERING & TECHNOLOGY (CET), Issue 3 2003G.M. Westhoff Abstract The phenomenon of healing appears to be a plausible explanation for the growth rate dispersion observed in many industrial crystallizers. In this paper a growth model is postulated, which describes the healing of plastically deformed attrition fragments. The rate of healing is assumed to be inversely proportional to the initial strain and to the rate of change of either the length, the area, or the volume of the crystal. The validity of the proposed model is verified by the simulation of growth of the smallest crystals (L0) in time in a growth experiment for specific combinations of the model parameters. In addition, the applicability of the proposed model is evaluated through simulations of steady state experimental data obtained in a 75-liter Draft Tube (DT) crystallizer. It is concluded that the proposed model is able to fit reasonably well the experimental crystal size distribution. The model predicts the existence of a ,dead time' during which attrition fragments with large initial strain do not grow and which may last several residence times. [source] Crystal growth by the travelling heater method using tapered crucibles and applied rotating magnetic fieldCRYSTAL RESEARCH AND TECHNOLOGY, Issue 8 2010J. Roszmann Abstract Crystal growth experiments were carried out by the Travelling Heater Method using tapered growth ampoules with and without the application of a rotating magnetic field. The objective was to enhance its commercial potential by reducing the size of required seed crystals and increasing the growth rate. To this end, a number of GaSb crystals were grown using either 25 mm diameter straight, or 10 mm to 25 mm tapered growth ampoules. Growth rates of 2 mm/day and 5 mm/day were employed. The effect of rotating magnetic fields of several strengths and frequencies was examined. (© 2010 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim) [source] Silicon transport under rotating and combined magnetic fields in liquid phase diffusion growth of SiGeCRYSTAL RESEARCH AND TECHNOLOGY, Issue 4 2010N. Armour Abstract The effect of applied rotating and combined (rotating and static) magnetic fields on silicon transport during the liquid phase diffusion growth of SiGe was experimentally studied. 72-hour growth periods produced some single crystal sections. Single and polycrystalline sections of the processed samples were examined for silicon composition. Results show that the application of a rotating magnetic field enhances silicon transport in the melt. It also has a slight positive effect on flattening the initial growth interface. For comparison, growth experiments were also conducted under combined (rotating and static) magnetic fields. The processed samples revealed that the addition of static field altered the thermal characteristics of the system significantly and led to a complete melt back of the germanium seed. Silicon transport in the melt was also enhanced under combined fields compared with experiments with no magnetic field. (© 2010 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim) [source] Anaerobic degradation of benzene by a marine sulfate-reducing enrichment culture, and cell hybridization of the dominant phylotypeENVIRONMENTAL MICROBIOLOGY, Issue 1 2008Florin Musat Summary The anaerobic biodegradation of benzene, a common constituent of petroleum and one of the least reactive aromatic hydrocarbons, is insufficiently understood with respect to the involved microorganisms and their metabolism. To study these aspects, sulfate-reducing bacteria were enriched with benzene as sole organic substrate using marine sediment as inoculum. Repeated subcultivation yielded a sediment-free enrichment culture constituted of mostly oval-shaped cells and showing benzene-dependent sulfate reduction and growth under strictly anoxic conditions. Amplification and sequencing of 16S rRNA genes from progressively diluted culture samples revealed an abundant phylotype; this was closely related to a clade of Deltaproteobacteria that includes sulfate-reducing bacteria able to degrade naphthalene or other aromatic hydrocarbons. Cell hybridization with two specifically designed 16S rRNA-targeted fluorescent oligonucleotide probes showed that the retrieved phylotype accounted for more than 85% of the cells detectable via DAPI staining (general cell staining) in the enrichment culture. The result suggests that the detected dominant phylotype is the ,candidate species' responsible for the anaerobic degradation of benzene. Quantitative growth experiments revealed complete oxidation of benzene with stoichiometric coupling to the reduction of sulfate to sulfide. Suspensions of benzene-grown cells did not show metabolic activity towards phenol or toluene. This observation suggests that benzene degradation by the enriched sulfate-reducing bacteria does not proceed via anaerobic hydroxylation (mediated through dehydrogenation) to free phenol or methylation to toluene, respectively, which are formerly proposed alternative mechanisms for benzene activation. [source] Fatigue crack nucleation and growth in filled natural rubberFATIGUE & FRACTURE OF ENGINEERING MATERIALS AND STRUCTURES, Issue 9 2003W. V. MARS ABSTRACT Rubber components subjected to fluctuating loads often fail due to nucleation and the growth of defects or cracks. The prevention of such failures depends upon an understanding of the mechanics underlying the failure process. This investigation explores the nucleation and growth of cracks in filled natural rubber. Both fatigue macro-crack nucleation as well as fatigue crack growth experiments were conducted using simple tension and planar tension specimens, respectively. Crack nucleation as well as crack growth life prediction analysis approaches were used to correlate the experimental data. Several aspects of the fatigue process, such as failure mode and the effects of R ratio (minimum strain) on fatigue life, are also discussed. It is shown that a small positive R ratio can have a significant beneficial effect on fatigue life and crack growth rate, particularly at low strain range. [source] Reproductive success of the rotifer Brachionus calyciflorus feeding on ciliates and flagellates of different trophic modesFRESHWATER BIOLOGY, Issue 10 2002Silvia Mohr SUMMARY 1. The nutritional value of the bacterivorous ciliate Tetrahymena pyriformis and the algivorous ciliate Coleps sp., as well as the heterotrophic flagellate Chilomonas paramecium and the autotrophic flagellate Cryptomonas ovata, were investigated in population growth experiments using the rotifer B. calyciflorus. The two ciliates, both flagellates, which were of similar size, shape and mobility, were each offered as a sole diet and as a supplement to the alga Monoraphidium minutum, known to support reproduction of B. calyciflorus. 2. To further test nutritional differences between the prey organisms, prey selection experiments were conducted in which B. calyciflorus was able to select between the bacterivorous and algivorous ciliate, and between the heterotrophic and autotrophic flagellate. 3. The results demonstrated that both ciliates and the heterotrophic flagellate were not sufficient to support reproduction of B. calyciflorus when offered as a sole diet. They were, however, a good supplement to algal prey (except for the bacterivorous ciliate T. pyriformis). In the prey selection experiments, B. calyciflorus positively selected for the algivorous Coleps sp. and the autotrophic C. ovata. 4. Overall, ciliates and heterotrophic flagellates may enhance survival of B. calyciflorus, but reproduction of the rotifer is likely to rely on algal prey. Both higher population growth of B. calyciflorus when fed the algivorous Coleps and the autotrophic Cryptomonas, along with their positive selection, give evidence for prey specific differences in nutrition, with algivorous or autotrophic prey species tending to be of higher nutritional value. [source] Abiotic,biotic controls on the origin and development of spicular sinter: in situ growth experiments, Champagne Pool, Waiotapu, New ZealandGEOBIOLOGY, Issue 2 2005K. M. HANDLEY Abiotic,biotic mechanisms of microstromatolitic spicular sinter (geyseritic) initiation and development were elucidated by in situ growth experiments at Champagne Pool (75 °C, pH 5.5). Siliceous sinter formed subaerially on glass slides placed along the margin of the hot spring. Environment,silica,microbe interactions were revealed by periodic collections of incremental sinter growth that formed under a range of environmental conditions including quiescence vs. wave turbulence, and wind,evaporation vs. steam,condensation. Sinter surfaces were intermittently colonized by voluminous networks of filamentous micro-organisms, with submicron diameters, that provided an extensive surface area for silica deposition. The subaerial distribution of sinter and its textures reflected micron- to centimetre-scale differences in environmental conditions, particularly relating to the balance between wave-supplied dissolved silica and its precipitation, forced by cooling and evaporation. A continuum of sinter textures formed, representing rates of silica precipitation that either out-paced biofilm growth or regulated the structural development of biofilms, and hence also the nature of microbially templated sinter. Massive laminae of porous, filamentous-network sinter and/or fenestrae (up to 10's of microns in thickness and diameter) formed at relatively low rates of silica deposition (approximately 0.2 mg slide,1 day,1). At high rates (>1.9 mg slide,1 day,1), densely packed, granular or nonporous sinter formed, with filament networks disappearing into the siliceous matrix and becoming imperceptible under scanning electron microscopy (SEM). Furthermore, spicules were nucleated by filamentous microcolonies, where their discrete conical morphologies were preserved by accretion of thin sinter laminae. Microstromatolitic spicular growth ensued at fluctuating low to high rates of silica precipitation. Greater apical sinter build-up, and hence upward polarity, resulted from focused microbial recolonization and progressively greater subaerial exposure at microspicule tips. The biogenic origin of spicular sinter at Champagne Pool clearly demonstrates that micron-scale biofilms, displaying self-organization patterns common to both biofilms and microbial mats, can be an essential factor in shaping characteristic centimetre-scale sinter macrostructures. These findings suggest that a biogenic origin for geyserites elsewhere should also be considered. Moreover, results corroborate the supposition that microbially generated surface roughness may be significant for stromatolite morphogenesis in cryptic Precambrian carbonates. [source] Premature Salmonella Typhimurium growth inhibition in competition with other Gram-negative organisms is redox potential regulated via RpoS inductionJOURNAL OF APPLIED MICROBIOLOGY, Issue 5 2004E. Komitopoulou Abstract Aims:, To identify the role of oxidation,reduction (redox) potential in the premature growth inhibition and RpoS induction in Salmonella serotype Typhimurium in competitive growth experiments. Methods and Results:, Oxidation,reduction potential was measured throughout the growth of a minority population of Salm. Typhimurium in mixed cultures with other Gram-negative and Gram-positive organisms. A lux -based reporter was also used to evaluate RpoS activity in Salm. Typhimurium in competitor studies. In a mixed culture, the multiplication of a minority population of Salm. Typhimurium was inhibited when competing Gram-negative organisms entered the stationary phase. This was not seen when the competing flora was Gram-positive. The change in redox potential during growth in mixed cultures was closely linked to the inhibition of Salm. Typhimurium growth by Gram-negative competitors. An artificially induced drop in redox potential earlier during growth in mixed cultures with Gram-negative organisms reduced the time to RpoS induction in Salm. Typhimurium and thus inhibited its multiplication prematurely. In contrast, RpoS induction and growth inhibition were prevented under high redox potential conditions. Conclusions:, This work shows that the inhibitory activity of competitive organisms can be mediated through their effect on redox potential-regulated RpoS induction. Significance and Impact of the Study:, Redox potential is shown to be an important determinant of Salm. Typhimurium growth, an observation with practical implications both for its control and detection. [source] Influence of phenolic acids on growth and inactivation of Oenococcus oeni and Lactobacillus hilgardiiJOURNAL OF APPLIED MICROBIOLOGY, Issue 2 2003F.M. Campos Abstract Aims: To determine the effect of several wine-associated, phenolic acids on the growth and viability of strains of Oenococcus oeni and Lactobacillus hilgardii. Methods and Results: Growth was monitored in ethanol-containing medium supplemented with varying concentrations of hydroxybenzoic acids (p -hydroxybenzoic, protocatechuic, gallic, vanillic and syringic acids) and hydroxycinnamic acids (p -coumaric, caffeic and ferulic acids). Progressive inactivation was monitored in ethanol-containing phosphate buffer supplemented in a similar manner to the growth experiments. Hydroxycinnamic acids proved to be more inhibitory to the growth of O. oeni than hydroxybenzoic acids. On the other hand, some acids showed a beneficial effect on growth of Lact. hilgardii. p- Coumaric acid showed the strongest inhibitory effect on growth and survival of both bacteria. Conclusions: Most phenolic acids had a negative effect on growth of O. oeni, for Lact. hilgardii this effect was only noted for p- coumaric acid. Generally, O. oeni was more sensitive to phenolic acid inactivation than Lact. hilgardii. Significance and Impact of the Study: Eight wine-derived, phenolic acids were compared for their effects on wine lactic acid bacteria. Results indicate that phenolic acids have the capacity to influence growth and survival parameters. The differences found between phenolic compounds could be related to their different chemical structures. [source] Competitive ability not kinship affects growth of Arabidopsis thaliana accessionsNEW PHYTOLOGIST, Issue 1 2010Frédéric Masclaux Summary ,In many organisms, individuals behave more altruistically towards relatives than towards unrelated individuals. Here, we conducted a study to determine if the performance of Arabidopsis thaliana is influenced by whether individuals are in competition with kin or non-kin. ,We selected seven pairs of genetically distinct accessions that originated from local populations throughout Europe. We measured the biomass of one focal plant surrounded by six kin or non-kin neighbours in in vitro growth experiments and counted the number of siliques produced per pot by one focal plant surrounded by four kin or non-kin neighbours. ,The biomass and number of siliques of a focal plant were not affected by the relatedness of the neighbour. Depending on the accession, a plant performed better or worse in a pure stand than when surrounded by non-kin plants. In addition, whole-genome microarray analyses revealed that there were no genes differentially expressed between kin and non-kin conditions. ,In conclusion, our study does not provide any evidence for a differential response to kin vs non-kin in A. thaliana. Rather, the outcome of the interaction between kin and non-kin seems to depend on the strength of the competitive abilities of the accessions. [source] Cadmium partitioning and gene expression studies in Nicotiana tabacum and Nicotiana rusticaPHYSIOLOGIA PLANTARUM, Issue 3 2006Lucien Bovet To better understand the differences in cadmium (Cd) uptake, partitioning and gene regulation between Nicotiana tabacum and Nicotiana rustica, we compared these two species for root and leaf Cd concentrations after different Cd exposures, 109Cd root-to-shoot transport, Cd tolerance as well as differential gene expression in roots exposed or not to CdCl2 using reverse transcriptase,PCR (RT-PCR). When grown in 1 ,M CdCl2 for 7 days, N. rustica exhibited higher root and lower leaf Cd contents than N. tabacum. Data were confirmed by radiolabeling experiments, which further showed that some 109Cd accumulated in the distal part of lateral roots in N. rustica. Visual inspection of leaves suggested that N. rustica was somewhat more tolerant to high Cd exposure (50 ,M CdCl2) compared with N. tabacum. At such a high Cd concentration, Cd toxic effects on N. tabacum leaves were apparently not directly related to the homeostasis of Fe and Mn. However, the Zn levels were different in N. rustica compared with N. tabacum in absence and presence of Cd treatments. Root growth experiments revealed that N. tabacum, but not N. rustica, root length was reduced in bactoagar medium containing 20 ,M CdCl2. Complementary DNA microarrays were used as a screening approach to demonstrate by RT-PCR that some gene products were differentially regulated by Cd in N. rustica and in N. tabacum. In addition, "NtIRT1,"NtMTP1a, "NtHMA3" and "NtNAS3" were inducible by Cd in N. tabacum. Interestingly "NtIRT1" and NtMTP1a were differently expressed between the two species. Our results suggest different pathways for Cd sequestration and transport between these two species. [source] Identification of proteins of Neisseria meningitidis induced under iron-limiting conditions using the isobaric tandem mass tag (TMT) labeling approachPROTEINS: STRUCTURE, FUNCTION AND BIOINFORMATICS, Issue 7 2009Peter van Ulsen Abstract Isobaric labeling reagents such as Tandem Mass Tags (TMT®) enable the genome-wide quantification of protein expression levels under different conditions using a gel-free MS/MS-based approach. Here, we applied a TMTduplex approach with two isobaric tags to study the response of the human pathogen Neisseria meningitidis to deprivation of iron, a condition met in the human body. In total, 609 proteins were identified in samples of three independent growth experiments, in which we compared cultures grown in the presence and absence of iron. Expression of 35 proteins was found to be induced or repressed under iron-limiting conditions, including 11 proteins whose ORFs were not previously identified in DNA array studies as being regulated by iron availability at the transcriptional level. These 11 proteins include proteins likely involved in iron metabolism. [source] Do virus-resistant plants pose a threat to non-target ecosystems?AUSTRAL ECOLOGY, Issue 5 2009Abstract One key environmental risk associated with the release of novel disease-resistant plants is the potential for non-target host populations to acquire resistance genes and undergo enemy release, leading to damage to associated native plant populations in high conservation-value ecosystems. Unfortunately, the dynamics of most natural pathosystems are poorly understood, and risk assessment of disease-resistant plants remains a challenge. Here we describe the first stage of a multi-tiered risk assessment strategy aimed at quantifying potential ecological release in a model pathosystem (the weedy pasture species Trifolium repens infected with Clover yellow vein virus; ClYVV) in order to assess the level of risk posed by genetically modified and conventionally bred disease-resistant host genotypes to non-target plant communities in south-eastern Australia. Glasshouse inoculation and growth experiments using 14 ClYVV isolates and 20 wild T. repens lines collected from high conservation-value montane grassland and woodland communities show that viral infection reduces the survival and growth of host plants by on average 10,50%. However, T. repens lines exhibited variable levels of resistance and tolerance to virus infection and ClYVV isolates differed in infectivity and aggressiveness, with grassland isolates having a greater pathogenic effect on associated host plants than woodland isolates. We conclude that ClYVV potentially plays an important role in limiting the size of T. repens populations in some at-risk non-target ecosystems and that second-tier field experiments are required to adequately quantify the risk associated with the commercial release of V-R T. repens genotypes in Australia. [source] Effect of periplasmic nitrate reductase on diauxic lag of Paracoccus pantotrophusBIOTECHNOLOGY PROGRESS, Issue 4 2009Kiranmai Durvasula Abstract Paracoccus pantotrophus expresses two nitrate reductases,membrane bound nitrate reductase (Nar) and periplasmic nitrate reductase (Nap). In growth experiments with two denitrifying species (Paracoccus pantotrophus and Alcaligenes eutrophus) that have both Nap and Nar and two species (Pseudomonas denitrificans and Pseudomonas fluorescens) with Nar only, it was found that diauxic lag is shorter for bacteria that express Nap. In P. pantotrophus, napEDABC encodes the periplasmic nitrate reductase. To analyze the effect of Nap on diauxic lag, the nap operon was deleted from P. pantotrophus. The growth experiments with nap, mutant resulted in increased diauxic lag when switched from aerobic to anoxic respiration, suggesting Nap is responsible for shorter lags and helps in adaptation to anoxic metabolism after transition from aerobic conditions. © 2009 American Institute of Chemical Engineers Biotechnol. Prog., 2009 [source] Antibiotic Resistance in Bacteria: Novel Metalloenzyme InhibitorsCHEMICAL BIOLOGY & DRUG DESIGN, Issue 4 2009Sung-Kun Kim ,-Lactam antibiotics are among the most important drugs used to fight bacterial infection. Overuse and misuse of ,-lactam antibiotics has caused the evolution of resistance mechanisms, allowing pathogenic bacteria to survive antibiotic treatment. The major source of resistance to ,-lactam antibiotics occurs through production of enzymes called ,-lactamases capable of catalyzing hydrolysis of the ,-lactam rings in these drug compounds. The metallo-,-lactamases have become a major threat due to their broad substrate specificities; there are no clinically useful inhibitors for these metalloenzymes. We have obtained single-stranded DNA's that are potent inhibitors of the Bacillus cereus 5/B/6 metallo-,-lactamase. These are rapid, reversible, non-competitive inhibitors of the metalloenzyme, with Ki and Ki, values in the nanomolar range. The inhibition patterns and metal ion dependence of their inhibition suggest that the oligonucleotides alter the coordination of the active site metal ion(s); inhibition is efficient and highly specific. Microbiological growth experiments, using combinations of ssDNA with the ,-lactam antibiotic cephalexin, reveal that the inhibitor is capable of causing cell death in liquid cultures of both Gram-positive and Gram-negative metallo-,-lactamase producing bacteria in the micromolar concentration range. [source] | |||||||||||||||||||||||||||||||