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Fission
Kinds of Fission Terms modified by Fission Selected AbstractsMorphogenesis of the Marine Ciliate, Pseudoamphisiella alveolata (Kahl, 1932) Song & Warren, 2000 (Ciliophora, Stichotrichia, Urostylida) During Binary FissionTHE JOURNAL OF EUKARYOTIC MICROBIOLOGY, Issue 5 2006CHEN SHAO ABSTRACT. Morphogenesis during the binary fission of the stichotrich ciliate Pseudoamphisiella alveolata, isolated from Jiaozhou Bay near Qingdao, China, was investigated using protargol silver impregnation. The process is characterized as follows: (1) in the proter, only the posterior part of the parental adoral zone of membranelles is renewed, where the membranelles dedifferentiate and then rebuild the UM-anlage and the missing membranelles, (2) the oral primordium in the opisthe and the FVT-anlagen in both dividers are formed de novo on the cell surface, (3) an "extra" anlage, which is generated on the right of the right marginal anlage, develops into three or four "extra" marginal cirri that connect the caudal cirri with the marginal rows, (4) the right marginal anlage is formed within the old structure, (5) the FVT-cirri develop in a primary mode, and (6) unlike most stichotrichs, the right marginal anlagen in both dividers generate closely together. As an additional contribution, the diversity of morphogenetic patterns within the genus Pseudoamphisiella is discussed. Based on both morphogenetic and SS rRNA gene sequencing data, the systematic position of the genus Pseudoamphisiella as well as the family Pseudoamphisiellidae Song et al. 1997 is briefly analyzed. The results indicate that they should very possibly represent a higher evolved group in the order Urostylida. [source] Ring Fission of Chiral Cyclic Acetals Plus Intramolecular [4 + 2] Cycloaddition: A Sequential Access to Medium-Size Lactones.CHEMINFORM, Issue 35 2005Application to the Synthesis of Carbasugars. Abstract For Abstract see ChemInform Abstract in Full Text. [source] Metal Nitrosyl Reactivity: Acetonitrile-Promoted Insertion of an Alkylidene into a Nitrosyl Ligand with Fission of the NO BondCHEMISTRY - A EUROPEAN JOURNAL, Issue 20 2006C. M. Frech Dr. Abstract Treatment of the complexes [Re(NO)2(PR3)2][BArF4] (R = Cy, 1,a; R = iPr, 1,b) with phenyldiazomethane gave the cationic benzylidene species [Re{CH(C6H5)}(NO)2(PR3)2][BArF4] (2,a and 2,b) in good yields. Upon reaction of 2,a and 2,b with acetonitrile, the consecutive formation of [Re(NCCH3)(NCPh)(NO)(OC(CH3)NH)(PR3)][BArF4] (3,a and 3,b) and [Re(NCCH3)(OC{CH3}NH{C6H5})(NO)(PR3)2][BArF4] (4,a and 4,b) was observed. The proposed reaction sequence involves the coupling of coordinated NO, carbene and acetonitrile molecules to yield the (1Z)- N -[imino(phenyl)methyl]ethanimidate ligand. The coupling of the nitrosyl and the benzylidene is anticipated to occur first, forming an oximate species. The subsequent acetonitrile addition can be envisaged as a heteroene reaction of the oximate and the acetonitrile ligand yielding 3,a and 3,b, which in turn can cyclise and undergo a prototropic shift initiated by an internal attack of the ethaneimidate ligand on the benzonitrile moiety to afford 4,a and 4,b. [source] Identification and separation of DNA-hybridized nanocolloids by Taylor cone harmonicsELECTROPHORESIS, Issue 18 2009Xinguang Cheng Abstract A rapid (minutes) electrospray bead-based DNA hybridization detection technique is developed by spraying a mixture of hybridized and unhybridized silica nanocolloids. With proper far-field control by external electrodes, the trajectory of the ejected nanobeads from the electrospray is governed by specific harmonics of the Laplace equation, which select discrete polar angles along well-separated field maxima near the conducting Taylor cone. Due to Rayleigh fission and evaporation, beads of different size acquire different total charge after ejection and suffer different normal electrophoretic displacement such that they are ejected along well-separated field maxima and are deposited in distinct rings on an intersecting plane. As the hybridized DNA is of the same dimension as that of the nanocolloid, the nanocolloids are hence easily differentiated from the unhybridized ones. This technique is highly specific as the high shear stress in the microjet shears away any non-specifically bound DNA from the nanocolloid surface. [source] Effect of ethoxylate number and alkyl chain length on the pathway and kinetics of linear alcohol ethoxylate biodegradation in activated sludgeENVIRONMENTAL TOXICOLOGY & CHEMISTRY, Issue 12 2004Nina R. Itrich Abstract Batch activated-sludge die-away studies were conducted with various pure homologs to determine the effect of ethoxylate number and alkyl chain length on the kinetics of primary and ultimate biodegradation of linear alcohol ethoxylates. The 14C-(ethoxylate) homologs C14E1, C14E3, C14E6, and C14E9 were used to investigate the effect of ethoxylate number, and 14C-(ethoxylate) homologs C12E6, C14E6, and C16E6 were used to examine the effect of chain length. Activated sludge was dosed with a trace concentration (0.2 ,M) of each homolog, and the disappearance of parent, formation of metabolites, production of 14CO2, and uptake into solids were monitored with time. Ethoxylate number had little effect on the first-order decay rates for primary biodegradation, which ranged from 61 to 78 h,1. However, alkyl chain length had a larger effect, with the C16 chain-length homolog exhibiting a slower rate of parent decay (18 h,1) compared to its corresponding C12 and C14 homologs (61,69 h,1). Ethoxylate number affected the mechanism of biodegradation, with fission of the central ether bond to yield the corresponding fatty alcohol and (poly)ethylene glycol group increasing in dominance with increasing ethoxylate number. Based upon the measured rates of primary biodegradation, removal of parent during activated-sludge treatment was predicted to range between 99.7 and 99.8% for all homologs except C16E6, which had a predicted removal of 98.9%. Based upon the measured rates of ultimate biodegradation, removal of ethoxylate-containing metabolites was predicted to exceed 83% for all homologs. These predictions corresponded closely with previously published removal measurements in laboratory continuous activated-sludge systems and actual treatment plants. [source] Stepwise proteolytic removal of the , subdomain in ,-lactalbuminFEBS JOURNAL, Issue 15 2001The protein remains folded, can form the molten globule in acid solution Bovine ,-lactalbumin (,-LA) is an ,/, protein which adopts partly folded states when dissolved at low pH (A-state), by removal of the protein-bound calcium at neutral pH and low salt concentration (apo-state), as well as in aqueous trifluoroethanol. Previous spectroscopic studies have indicated that the A-state of ,-LA at pH 2.0, considered a prototype molten globule, has a native-like fold in which the helical core is mostly retained, while the , subdomain is less structured. Here, we investigate the conformational features of three derivatives of ,-LA characterized by a single peptide bond fission or a deletion of 12 or 19/22 amino-acid residues of the , subdomain of the native protein (approximately from residue 34 to 57). These ,-LA derivatives were obtained by limited proteolysis of the protein in its partly folded state(s). A nicked ,-LA species consisting of fragments 1-,3,40 and 41,123 (nicked-LA) was prepared by thermolytic digestion of the 123-residue chain of ,-LA in 50% (v/v) aqueous trifluoroethanol. Two truncated or gapped protein species given by fragments 1,40 and 53,123 (des,1-LA) or fragments 1,34 and 54-,57,123 (des,2-LA) were obtained by digestion of ,-LA with pepsin in acid or with proteinase K at neutral pH in its apo-state, respectively. The two protein fragments of nicked or gapped ,-LA are covalently linked by the four disulfide bridges of the native protein. CD measurements revealed that, in aqueous solution at neutral pH and in the presence of calcium, the three protein species maintain the helical secondary structure of intact ,-LA, while the tertiary structure is strongly affected by the proteolytic cleavages of the chain. Temperature effects of CD signals in the far- and near-UV region reveal a much more labile tertiary structure in the ,-LA derivatives, while the secondary structure is mostly retained even upon heating. In acid solution at pH 2.0, the three ,-LA variants adopt a conformational state essentially identical to the molten globule displayed by intact ,-LA, as demonstrated by CD measurements. Moreover, they bind strongly the fluorescent dye 8-anilinonaphthalene-1-sulfonate, which is considered a diagnostic feature of the molten globule of proteins. Therefore, the , subdomain can be removed from the ,-LA molecule without impairing the capability of the rest of the chain to adopt a molten globule state. The results of this protein dissection study provide direct experimental evidence that in the ,-LA molten globule only the , domain is structured. [source] Functional analysis of the C-terminal cytoplasmic region of the M-factor receptor in fission yeastGENES TO CELLS, Issue 3 2001Kouji Hirota Background Yeast mating-pheromone receptors facilitate the study of G protein-coupled signal transduction. To date, molecular dissection of the budding yeast ,-factor receptor has been done extensively, but little analysis has been performed with pheromone receptors of fission yeast, another genetically tractable yeast species. Results We analysed the fission yeast M-factor receptor Map3p. Truncation of the C-terminal 54 amino acids made Map3p dominant-negative over the wild-type. This form, called Map3-dn9p, was competent in the induction of pheromone-dependent gene expression, although it could not direct proper conjugation. Map3-dn9p failed both to provoke the orientated projection of conjugation tubes and to induce adaptation to the pheromone signal associated with endocytosis of the receptor. Deletion and substitution analyses suggested that the integrity of the C-terminal region, rather than a specific subgroup of amino acid residues therein, was vital for the respective Map3p activities. Ubiquitination of the C-terminus was not absolutely essential for Map3p function. Conclusions The C-terminal region of Map3p is dispensable for the pheromone signalling per se, but is pivotal for adaptation and pheromone-induced conjugation tube formation, as is true with the budding yeast ,-factor receptor. However, the mechanisms which induce adaptation appear to differ between fission and budding yeast concerning the necessity of ubiquitination. [source] Electrodynamic Disaggregation: Does it Affect Apatite Fission-Track and (U-Th)/He Analyses?GEOSTANDARDS & GEOANALYTICAL RESEARCH, Issue 1 2010Jörg Giese désagrégation électrodynamique; analyse des traces de fission sur apatite; recuit; analyse (U-Th)/He; diffusion de l'He Apatite fission-track and (U-Th)/He analyses require the liberation of intact idiomorphic apatite grains from rock samples. While routinely being carried out by mechanical methods, electrodynamic disaggregation (ED) offers an alternative approach. The high-voltage discharges produced during the ED process create localised temperature peaks (10000 K) along a narrow plasma channel. In apatite, such high temperatures could potentially reduce the length of fission tracks, which start to anneal at temperatures > 60 °C, and could also enhance He diffusion, which becomes significant at 30,40 °C over geological time scales. A comparison of fission-track analyses and (U-Th)/He ages of apatites prepared both by mechanical (jaw crusher, disk mill) and ED processing provides a way of determining whether heating during the latter method has any significant effect. Apatites from three samples of different geological settings (an orthogneiss from Madagascar, the Fish Canyon Tuff, and a muscovite-gneiss from Greece) yielded statistically identical track length distributions compared to samples prepared mechanically. Additionally, (U-Th)/He ages of apatites from a leucogranite from Morocco prepared by both methods were indistinguishable. These first results indicated that during electrodynamic disaggregation apatite crystals were not heated enough to partially anneal the fission tracks or induce significant diffusive loss of He. Les analyses des traces de fission et des rapports isotopiques (U-Th)/He sur apatite nécessitent la séparation de grains intacts et automorphes d'apatite à partir des échantillons de roche. La désagrégation électrodynamique (DE) offre une approche alternative aux méthodes mécaniques utilisées actuellement en routine. Les décharges de haute tension produite pendant le processus de DE entrainent la formation de pics de température (10000 K) localisés le long d'un étroit canal de plasma. Dans l'apatite, de telles températures peuvent potentiellement réduire la longueur des traces de fission, qui commencent à recuire à des températures > 60 °C, et peuvent aussi favoriser la diffusion de l'Hélium, qui devient significative à des températures de 30,40 °C sur des échelles de temps géologiques. Une comparaison des résultats obtenus à partir des analyses des traces de fission et des âges (U-Th)/He sur des apatites séparées par des moyens mécaniques (concasseur à mâchoires, broyeur à disque) et sur d'autres séparées par la méthode de désagrégation électrodynamique offre un moyen de déterminer si le chauffage lié,à la seconde méthode a un effet significatif. Les apatites séparées par la méthode DE à partir de trois échantillons provenant de différents contextes géologiques (un orthogneiss de Madagascar, le tuf de Fish Canyon et un gneiss à muscovite de Grèce) fournissent des distributions de longueurs de trace de fission statistiquement identiques par rapport à des échantillons préparés mécaniquement. En outre, des âges (U-Th)/He obtenus à partir d'apatites provenant d'un leucogranite du Maroc et préparées par les deux méthodes (DE et mécaniques) sont indiscernables. Ces premiers résultats indiquent que, pendant la désagrégation électrodynamique, les cristaux d'apatite n'ont pas été suffisamment chauffés pour soit recuire partiellement les traces de fission soit provoquer une perte significative par diffusion de l'He. [source] Preferential solvational effects on the Cr(VI) oxidation of benzylamines in benzene/2-methylpropan-2-ol mixturesINTERNATIONAL JOURNAL OF CHEMICAL KINETICS, Issue 3 2010A. Thirumoorthi Imidazolium fluorochromate (IFC) oxidation of 11 meta- and para-substituted benzylamines, in varying mole fractions of benzene/2-methylpropan-2-ol binary mixtures, is first order in IFC and acid and zero order in substrate. The Hammett correlation yielded a U-shaped curve, indicating a change in the relative importance of bond formation and bond fission in the transition state. The rate data failed to correlate with macroscopic solvent parameters such as ,r and E. The correlation of kobs with Kamlet,Taft solvatochromic parameters suggests that H-bonding between the reacting species and the solvent plays a major role in governing the reactivity. © 2010 Wiley Periodicals, Inc. Int J Chem Kinet 42: 159,167, 2010 [source] Kinetics of the thermal decomposition of bis(trifluoromethyl) peroxydicarbonate, CF3OC(O)OOC(O)OCF3INTERNATIONAL JOURNAL OF CHEMICAL KINETICS, Issue 1 2003Maximiliano A. Burgos Paci Thermal decomposition of bis(trifluoromethyl) peroxydicarbonate has been studied. The mechanism of decomposition is a simple bond fission, homogeneous first-order process when the reaction is carried out in the presence of inert gases such as N2 or CO. An activation energy of 28.5 kcal mol,1 was determined for the temperature range of 50,90°C. Decomposition is accelerated by nitric oxide because of a chemical attack on the peroxide forming substances different from those formed with N2 or CO. An interpretation on the influence of the substituents in different peroxides on the OO bond is given. © 2002 Wiley Periodicals, Inc. Int J Chem Kinet 35: 15,19, 2003 [source] Comparison of developmental trajectories in the starlet sea anemone Nematostella vectensis: embryogenesis, regeneration, and two forms of asexual fissionINVERTEBRATE BIOLOGY, Issue 2 2007Adam M. Reitzel Abstract. The starlet sea anemone, Nematostella vectensis, is a small burrowing estuarine animal, native to the Atlantic coast of North America. In recent years, this anemone has emerged as a model system in cnidarian developmental biology. Molecular studies of embryology and larval development in N. vectensis have provided important insights into the evolution of key metazoan traits. However, the adult body plan of N. vectensis may arise via four distinct developmental trajectories: (1) embryogenesis following sexual reproduction, (2) asexual reproduction via physal pinching, (3) asexual reproduction via polarity reversal, and (4) regeneration following bisection through the body column. Here, we compare the ontogenetic sequences underlying alternate developmental trajectories. Additionally, we describe the predictable generation of anomalous phenotypes that can occur following localized injuries to the body column. These studies suggest testable hypotheses on the molecular mechanisms underlying alternate developmental trajectories, and they provoke new questions about the evolution of novel developmental trajectories and their initiation via environmental cues. [source] Biology and taxonomy of encrusting alcyoniid soft corals in the northeastern Pacific Ocean with descriptions of two new genera (Cnidaria, Anthozoa, Octocorallia)INVERTEBRATE BIOLOGY, Issue 2 2003Catherine S. McFadden Abstract. In this paper we summarize current knowledge of the distribution, ecology, and reproductive biology of 4 encrusting species in the soft coral family Alcyoniidae, with descriptions of 2 new genera and 2 new species. The new genus Discophyton is erected for Alcyonium rudyi, a species common in the lower intertidal of exposed rocky headlands from Vancouver Island, British Columbia, Canada south to Point Lobos, California, USA. Discophyton rudyi n. gen. & n. comb. propagates extensively by clonal fission, giving rise to characteristic aggregations of small, regularly spaced, disc-shaped colonies. We describe 2 new species and place them in a new genus, Thrombophyton. Thrombophyton coronatum n. gen. & n. sp. forms irregularly shaped, membranous colonies on rock surfaces; it occurs subtidally along the southern California coast from the Palos Verdes Peninsula to San Diego and on the California Islands. Thrombophyton trachydermum n. gen. & n. sp. has a similar, membranous growth form; it occurs both intertidally and subtidally on Vancouver Island, British Columbia, Canada, and in the San Juan Archipelago, Washington, and intertidally in central California, USA. Alcyonium pacificum, reported for the first time from North American waters, occurs in subtidal kelp beds around the Aleutian islands of Attu and Adak; its mushroom-shaped colonies are raised above the substrate on a short stalk. D. rudyi, T. trachydermum, and A. pacificum are all gonochores that reproduce in late summer; in contrast, T. coronatum appears to reproduce in the spring. D. rudyi and T. coronatum brood larvae internally to a late planula stage. A key to species is presented for all shallow-water soft corals known to occur in the northeastern Pacific Ocean. [source] Abundance and clonal replication in the tropical corallimorpharian Rhodactis rhodostomaINVERTEBRATE BIOLOGY, Issue 4 2000Nanette E. Chadwick-Furman Abstract. The corallimorpharian Rhodactis rhodostoma appears to be an opportunistic species capable of rapidly monopolizing patches of unoccupied shallow substrate on tropical reefs. On a fringing coral reef at Eilat, Israel, northern Red Sea, we examined patterns of abundance and clonal replication in R. rhodostoma in order to understand the modes and rates of spread of polyps across the reef flat. Polyps were abundant on the inner reef flat (maximum 1510 polyps m,2 and 69% cover), rare on the outer reef flat, and completely absent on the outer reef slope at >3 m depth. Individuals cloned throughout the year via 3 distinct modes: longitudinal fission, inverse budding, and marginal budding. Marginal budding is a replicative mode not previously described. Cloning mode varied significantly with polyp size. Approximately 9% of polyps cloned each month, leading to a clonal doubling time of about 1 year. The rate of cloning varied seasonally and depended on day length and seawater temperature, except for a brief reduction in cloning during midsummer when polyps spawned gametes. Polyps of R. rhodostoma appear to have replicated extensively following a catastrophic low-tide disturbance in 1970, and have become an alternate dominant to stony corals on parts of the reef flat. [source] Topology of the Mitochondrial Inner Membrane: Dynamics and Bioenergetic ImplicationsIUBMB LIFE, Issue 3-5 2001Carmen A. Mannella Abstract Electron tomography indicates that the mitochondrial inner membrane is not normally comprised of baffle-like folds as depicted in textbooks. In actuality, this membrane is pleomorphic, with narrow tubular regions connecting the internal compartments (cristae) to each other and to the membrane periphery. The membrane topologies observed in condensed (matrix contracted) and orthodox (matrix expanded) mitochondria cannot be interconverted by passive folding and unfolding. Instead, transitions between these morphological states likely involve membrane fusion and fission. Formation of tubular junctions in the inner membrane appears to be energetically favored, because they form spontaneously in yeast mitochondria following large-amplitude swelling and recontraction. However, aberrant, unattached, vesicular cristae are also observed in these mitochondria, suggesting that formation of cristae junctions depends on factors (such as the distribution of key proteins and/or lipids) that are disrupted during extreme swelling. Computer modeling studies using the "Virtual Cell" program suggest that the shape of the inner membrane can influence mitochondrial function. Simulations indicate that narrow cristae junctions restrict diffusion between intracristal and external compartments, causing depletion of ADP and decreased ATP output inside the cristae. [source] Complex patterns of mitochondrial dynamics in human pancreatic cells revealed by fluorescent confocal imagingJOURNAL OF CELLULAR AND MOLECULAR MEDICINE, Issue 1-2 2010Andrey V. Kuznetsov Abstract Mitochondrial morphology and intracellular organization are tightly controlled by the processes of mitochondrial fission,fusion. Moreover, mitochondrial movement and redistribution provide a local ATP supply at cellular sites of particular demands. Here we analysed mitochondrial dynamics in isolated primary human pancreatic cells. Using real time confocal microscopy and mitochondria-specific fluorescent probes tetramethylrhodamine methyl ester and MitoTracker Green we documented complex and novel patterns of spatial and temporal organization of mitochondria, mitochondrial morphology and motility. The most commonly observed types of mitochondrial dynamics were (i) fast fission and fusion; (ii) small oscillating movements of the mitochondrial network; (iii) larger movements, including filament extension, retraction, fast (0.1,0.3 ,m/sec.) and frequent oscillating (back and forth) branching in the mitochondrial network; (iv) as well as combinations of these actions and (v) long-distance intracellular translocation of single spherical mitochondria or separated mitochondrial filaments with velocity up to 0.5 ,m/sec. Moreover, we show here for the first time, a formation of unusual mitochondrial shapes like rings, loops, and astonishingly even knots created from one or more mitochondrial filaments. These data demonstrate the presence of extensive heterogeneity in mitochondrial morphology and dynamics in living cells under primary culture conditions. In summary, this study reports new patterns of morphological changes and dynamic motion of mitochondria in human pancreatic cells, suggesting an important role of integrations of mitochondria with other intracellular structures and systems. [source] Acetyl -l- carnitine protects yeast cells from apoptosis and aging and inhibits mitochondrial fissionAGING CELL, Issue 4 2010Vanessa Palermo Summary In this work we report that carnitines, in particular acetyl -l- carnitine (ALC), are able to prolong the chronological aging of yeast cells during the stationary phase. Lifespan extension is significantly reduced in yca1 mutants as well in rho0 strains, suggesting that the protective effects pass through the Yca1 caspase and mitochondrial functions. ALC can also prevent apoptosis in pro-apoptotic mutants, pointing to the importance of mitochondrial functions in regulating yeast apoptosis and aging. We also demonstrate that ALC attenuates mitochondrial fission in aged yeast cells, indicating a correlation between its protective effect and this process. Our findings suggest that ALC, used as therapeutic for stroke, myocardial infarction and neurodegenerative diseases, besides the well-known anti-oxidant effects, might exert protective effects also acting on mitochondrial morphology. [source] Nicotinamide enhances mitochondria quality through autophagy activation in human cellsAGING CELL, Issue 4 2009Hyun Tae Kang Summary Nicotinamide (NAM) treatment causes a decrease in mitochondrial respiration and reactive oxygen species production in primary human fibroblasts and extends their replicative lifespan. In the current study, it is reported that NAM treatment induces a decrease in mitochondrial mass and an increase in membrane potential (,,m) by accelerating autophagic degradation of mitochondria. In the NAM-treated cells, the level of LC3-II as well as the number of LC3 puncta and lysosomes co-localizing with mitochondria substantially increased. Furthermore, in the NAM-treated cells, the levels of Fis1, Drp1, and Mfn1, proteins that regulate mitochondrial fission and fusion, increased and mitochondria experienced dramatic changes in structure from filaments to dots or rings. This structural change is required for the decrease of mitochondrial mass indicating that NAM accelerates mitochondrial autophagy, at least in part, by inducing mitochondrial fragmentation. The decrease in mitochondria mass was attenuated by treatment with cyclosporine A, which prevents the loss of mitochondrial membrane potential by blocking the mitochondrial permeability transition, suggesting autophagic degradation selective for mitochondria with low ,,m. All these changes were accompanied by and dependent on an increase in the levels of GAPDH, and are blocked by inhibition of the cellular conversion of NAM to NAD+. Taken together with our previous findings, these results suggest that up-regulation of GAPDH activity may prolong healthy lifespan of human cells through autophagy-mediated mitochondria quality maintenance. [source] Mass spectrometric and chemical stability of the Asp-Pro bond in herpes simplex virus epitope peptides compared with X-Pro bonds of related sequencesJOURNAL OF PEPTIDE SCIENCE, Issue 8 2002Zsolt Skribanek Abstract The mass spectrometric analysis of the immunodominant epitope region (273,284) of herpes simplex virus type 1 (HSV-1) glycoprotein D (gD) showed a favoured fission at the Asp-Pro peptide bond. The fast atom bombardment collision induced dissociation (FAB-CID) study of closely related X-Pro peptides documented that neither the length nor the amino acid composition of the peptide has a significant influence on this preferential cleavage. At the same time the DP bond proved to be sensitive to acidic conditions in the course of peptide synthesis. These observations prompted us to compare the chemical and mass spectrometric stability of a new set of nonapeptides related to the 273,284 epitope region of gD, i.e. SALLEDPVG and SALLEXPVG peptides, where X = A, K, I, S, F, E or D, respectively. The chemical stability of these peptides during acidic hydrolysis was investigated by electrospray ionization mass spectrometry (ESI-MS) and the products were identified by ESI-MS and on-line high performance liquid chromatography,mass spectrometry (HPLC-MS). The mass spectrometric fragmentation and bond stability of the untreated peptide samples were also studied using ESI-MS and liquid secondary ion mass spectrometry (LSIMS). Both the chemical hydrolysis and the mass spectrometric fragmentation showed that the Asp-Pro bond could easily be cleaved, while the KP bond proved to be stable under both circumstances. On the other hand, the XP bond (X = A, I, S, F or E) fragmented easily under the mass spectrometric conditions, but was not sensitive to the acidolysis. Copyright © 2002 European Peptide Society and John Wiley & Sons, Ltd. [source] RELATIONSHIP BETWEEN PRESENCE OF A MOTHER CELL WALL AND SPECIATION IN THE UNICELLULAR MICROALGA NANNOCHLORIS (CHLOROPHYTA),JOURNAL OF PHYCOLOGY, Issue 1 2003Maki Yamamoto The cell division mechanisms of seven strains from six species of Nannochloris Naumann were analyzed and compared with those of three species of Chlorella Beijerinck and Trebouxia erici Ahmadjian using differential interference microscopy and fluorescence microscopy. Nannochloris bacillaris Naumann divides by binary fission and N. coccoides Naumann divides by budding. Distinct triangular spaces or mother cell walls were found in the dividing autosporangia of the other five strains from four species of Nannochloris, three species of Chlorella, and T. erici. In an attempt to infer an evolutionary relationship between nonautosporic and autosporic species of Nannochloris, we constructed a phylogenetic tree of the actin genes using seven strains from six species of Nannochloris, three species of Chlorella, and T. erici. Nannochloris species were polyphyletic in the Trebouxiophyceae group. Two nonautosporic species of N. bacillaris and N. coccoides were monophyletic and positioned distally. Moreover, to determine their phylogenetic position within the Trebouxiophyceae, we constructed phylogenetic tree of 18S rRNA genes adding other species of Trebouxiophyceae. Nannochloris species were polyphyletic in the Trebouxiophyceae and appeared in two different lineages, a Chlorella,Nannochloris group and a Trebouxia,Choricystis group. The nonautosporic species, N. bacillaris and N. coccoides, and three autosporic species of Nannochloris belonged to the Chlorella,Nannochloris group. Nannochloris bacillaris and N. coccoides were also monophyletic and positioned distally in the phylogenetic tree of 18S rRNA genes. These results suggest that autosporulation is the ancestral mode of cell division in Nannochloris and that nonautosporulative mechanisms, such as binary fission and budding, evolved secondarily. [source] Eviction and dispersal in co-operatively breeding banded mongooses (Mungos mungo)JOURNAL OF ZOOLOGY, Issue 2 2001Michael A. Cant Abstract The mode by which individuals disperse, and the cost of dispersal, are of great importance in attempts to understand variation in reproductive skew in animal societies. In this paper we report detailed information on dispersal and pack formation in banded mongooses Mungos mungo. Six pack fission events were recorded among 11 packs over 22 months. Pack fission occurred under two distinct circumstances. First, groups of individuals were evicted from their natal group as a result of intense aggression from other group members. A small fraction of group members was responsible for most of the aggression. Both sexes helped to attack and evict individuals from the group, and both males and females were driven out of their natal groups en masse. The second mode of pack fission occurred when groups of same-sex individuals left their natal group voluntarily to join dispersing individuals of the opposite sex, thereby forming new packs. Dispersing groups were more frequently involved in fights with rival packs of mongooses compared to established groups, and in one instance these fights seemed to be responsible for severe injury and increased mortality among members of a dispersing group. The observations of eviction provide one line of evidence that the presence of subordinates is sometimes detrimental to dominants, contrary to the assumptions of concession models of reproductive skew. [source] Do sampling method and sample size affect basic measures of dolphin sociality?MARINE MAMMAL SCIENCE, Issue 1 2009Quincy Anne Gibson Abstract Although the fission,fusion social patterns of bottlenose dolphins have been described, defining and measuring sociality is difficult. No study to date has investigated how much data are necessary to accurately depict social patterns in a fission,fusion species and whether this amount differs depending on the measure used. Using the long-term Shark Bay bottlenose dolphin study we examined four different measures of sociality for mothers and dependent calves (n= 89). Our objectives were to determine (1) the amount of observation time necessary to accurately depict sociality using these measures, (2) correlations among these measures, and (3) if sampling method affects the validity of sociality measurements. A minimum of 10 h and 5 h of observations, respectively, were necessary to accurately capture calf associate numbers and percent time alone. A pairwise comparison of calf sociality measurements from focal and survey data found that calves spent from 0% to 70.2% of their time alone in focal data, but these same calves spent only 0%,7.7% alone in survey data. These findings indicate that (1) results differ depending on the type of sampling method and (2) the amount of observation time necessary to adequately capture individual variation differs depending on the measure of sociality. [source] The role of mass spectrometry to study the Oklo,Bangombé natural reactors,MASS SPECTROMETRY REVIEWS, Issue 5 2007J.R. De Laeter Abstract The discovery of the existence of chain reactions at the Oklo natural reactors in Gabon, Central Africa in 1972 was a triumph for the accuracy of mass spectrometric measurements, in that a 0.5% anomaly in the 235U/238U ratio of certain U ore samples indicated a depletion in 235U. Mass spectrometric techniques thereafter played a dominant role in determining the nuclear parameters of the reactor zones themselves, and in deciphering the geochemical characteristics of various elements in the U-rich ore and in the surrounding rock strata. The variations in the isotopic composition of a large number of elements, caused by a combination of nuclear fission, neutron capture and radioactive decay, provide a powerful tool for investigating this unique geological environment. Mass spectrometry can be used to measure the present-day elemental and isotopic abundances of numerous elements, so as to decipher the past history of the reactors and examine the retentivity/mobility of these elements. Many of the fission products have a radioactive decay history that have been used to date the age and duration of the reactor zones, and to provide insight into their nuclear and geochemical behavior as a function of time. The Oklo fission reactors and their near neighbor at Bangombé, some 30 km to the south-east of Oklo, are unique in that not only did they become critical some 2,×,109 years ago, but also the deposits have been preserved over this period of geological time. The long-term geochemical behavior of actinides and fission products have been extensively studied by a variety of mass spectrometric techniques over the past 30 years to provide us with significant information on the mobility/retentivity of this material in a natural geological repository. The Oklo,Bangombé natural reactors are therefore geological analogs that can be evaluated in terms of possible radioactive waste containment sites. As more reactor zones were discovered, it was realized that they could be classified into two groups according to their burial depth in the Oklo mine-site. Reactor Zones 10, 13, and 16 were buried more deeply, and were therefore less weathered than the other zones. The less-weathered zones are of great importance in mobility/retentivity studies and therefore to the question of radioactive waste containment. Isotopic studies of these natural reactors are also of value in physics to examine possible variations in fundamental constants over the past 2 billion years. © 2007 Wiley Periodicals, Inc., Mass Spec Rev 26:683,712, 2007 [source] Peroxisome assembly in yeastMICROSCOPY RESEARCH AND TECHNIQUE, Issue 2 2003Marten Veenhuis Abstract Peroxisomes are essential organelles that may be involved in various functions, dependent on organism, cell type, developmental stage of the cell, and the environment. Until recently, peroxisomes were viewed as a class of static organelles that developed by growth and fission from pre-existing organelles. Recent observations have challenged this view by providing evidence that peroxisomes may be part of the endomembrane system and constitute a highly dynamic population of organelles that arises and is removed upon environmental demands. Additionally, evidence is now accumulating that peroxisomes may arise by alternative methods. This review summarizes relevant recent data on this subject. In addition, the progress in the understanding of the principles of the peroxisomal matrix protein import machinery is discussed. Microsc. Res. Tech. 61:139,150, 2003. © 2003 Wiley-Liss, Inc. [source] Fine-scale population genetic structure in a fission,fusion societyMOLECULAR ECOLOGY, Issue 11 2008ELIZABETH A. ARCHIE Abstract Nonrandom patterns of mating and dispersal create fine-scale genetic structure in natural populations , especially of social mammals , with important evolutionary and conservation genetic consequences. Such structure is well-characterized for typical mammalian societies; that is, societies where social group composition is stable, dispersal is male-biased, and males form permanent breeding associations in just one or a few social groups over the course of their lives. However, genetic structure is not well understood for social mammals that differ from this pattern, including elephants. In elephant societies, social groups fission and fuse, and males never form permanent breeding associations with female groups. Here, we combine 33 years of behavioural observations with genetic information for 545 African elephants (Loxodonta africana), to investigate how mating and dispersal behaviours structure genetic variation between social groups and across age classes. We found that, like most social mammals, female matrilocality in elephants creates co-ancestry within core social groups and significant genetic differentiation between groups (,ST = 0.058). However, unlike typical social mammals, male elephants do not bias reproduction towards a limited subset of social groups, and instead breed randomly across the population. As a result, reproductively dominant males mediate gene flow between core groups, which creates cohorts of similar-aged paternal relatives across the population. Because poaching tends to eliminate the oldest elephants from populations, illegal hunting and poaching are likely to erode fine-scale genetic structure. We discuss our results and their evolutionary and conservation genetic implications in the context of other social mammals. [source] Extreme queen-mating frequency and colony fission in African army antsMOLECULAR ECOLOGY, Issue 8 2004DANIEL J. C. KRONAUER Abstract Army ants have long been suspected to represent an independent origin of multiple queen-mating in the social Hymenoptera. Using microsatellite markers, we show that queens of the African army ant Dorylus (Anomma) molestus have the highest absolute (17.3) and effective (17.5) queen-mating frequencies reported so far for ants. This confirms that obligate multiple queen-mating in social insects is associated with large colony size and advanced social organization, but also raises several novel questions. First, these high estimates place army ants in the range of mating frequencies of honeybees, which have so far been regarded as odd exceptions within the social Hymenoptera. Army ants and honeybees are fundamentally different in morphology and life history, but are the only social insects known that combine obligate multiple mating with reproduction by colony fission and extremely male-biased sex ratios. This implies that the very high numbers of matings in both groups may be due partly to the relatively low costs of additional matings. Second, we were able to trace recent events of colony fission in four of the investigated colonies, where the genotypes of the two queens were only compatible with a mother,daughter relationship. A direct comparison of male production between colonies with offspring from one and two queens, respectively, suggested strongly that new queens do not produce a sexual brood until all workers of the old queen have died, which is consistent with kin selection theory. [source] The PAK family kinase Cla4 is required for budding and morphogenesis in Ustilago maydisMOLECULAR MICROBIOLOGY, Issue 2 2004Leonora Leveleki Summary The phytopathogenic basidiomycete Ustilago maydis displays a dimorphic switch between budding growth of haploid cells and filamentous growth of the dikaryon. In a screen for mutants affected in morphogenesis and cytokinesis, we identified the serine/threonine protein kinase Cla4, a member of the family of p21-activated kinases (PAKs). Cells, in which cla4 has been deleted, are viable but they are unable to bud properly. Instead, cla4 mutant cells grow as branched septate hyphae and divide by contraction and fission at septal cross walls. Delocalized deposition of chitinous cell wall material along the cell surface is observed in cla4 mutant cells. Deletion of the Cdc42/Rac1 interaction domain (CRIB) results in a constitutive active Cla4 kinase, whose expression is lethal for the cell. cla4 mutant cells are unable to induce pathogenic development in plants and to display filamentous growth in a mating reaction, although they are still able to secrete pheromone and to undergo cell fusion with wild-type cells. We propose that Cla4 is involved in the regulation of cell polarity during budding and filamentation. [source] Cell cycle regulator Cdc14 is expressed during sporulation but not hyphal growth in the fungus-like oomycete Phytophthora infestansMOLECULAR MICROBIOLOGY, Issue 2 2003Audrey M. V. Ah Fong Summary Cdc14 proteins are important regulators of mitosis and the cell cycle. These phosphatases have been studied previously only in yeasts and metazoans, which grow by fission or budding. Here we describe a homologue (piCdc14) from the oomycete Phytophthora infestans, a primitive eukaryote lacking a classical cell cycle. PiCdc14 complements a cdc14ts mutant of Saccharomyces cerevisiae and may function like other Cdc14 proteins, but displays a strikingly different pattern of expression. Whereas previously studied Cdc14 genes are constitutively transcribed, piCdc14 is not expressed during normal growth but instead only during asexual sporulation. In transformants of P. infestans expressing a fusion between the piCdc14 promoter and the ,-glucuronidase reporter, expression was first detected in sporangiophore initials, persisted in sporangiophores bearing immature sporangia, and later became restricted to mature sporangia. After germination, expression ended a few hours before the resumption of mitosis in hyphae emerged from the spores. Homology-dependent silencing experiments supported an essential role of piCdc14 in sporulation. It is proposed that the function of piCdc14 may be to synchronise nuclear behaviour during sporulation and maintain dormancy in spores until germination. These results help illuminate the process of sporulation in oomycetes and the evolution of the cell cycle in eukaryotes. [source] Three temporal classes of gene expression during the Chlamydia trachomatis developmental cycleMOLECULAR MICROBIOLOGY, Issue 4 2000E. I. Shaw The obligate intracellular bacterium Chlamydia trachomatis has a unique developmental cycle that involves functionally and morphologically distinct cell types adapted for extracellular survival and intracellular multiplication. Infection is initiated by an environmentally resistant cell type called an elementary body (EB). Over the first several hours of infection, EBs differentiate into a larger replicative form, termed the reticulate body (RB). Late in the infectious process, RBs asynchronously begin to differentiate back to EBs, which accumulate within the lumen of the inclusion until released from the host cell for subsequent rounds of infection. In an effort to characterize temporal gene expression in relation to the chlamydial developmental cycle, we have used quantitative,competitive polymerase chain reaction (QC-PCR) and reverse transcription (RT)-PCR techniques. These analyses demonstrate that C. trachomatis double their DNA content every 2,3 h, with synthesis beginning between 2 and 4 h after infection. We determined the onset of transcription of specific temporal classes of developmentally expressed genes. RT-PCR analysis was performed on several genes encoding key enzymes or components of essential biochemical pathways and functions. This comparison encompassed approximately 8% of open reading frames on the C. trachomatis genome. In analysis of total RNA samples harvested at 2, 6, 12 and 20 h after infection, using conditions under which a single chlamydial transcript per infected cell is detected, three major temporal classes of gene expression were resolved. Initiation of transcription appears to occur in three temporal classes which we have operationally defined as: early, which are detected by 2 h after infection during the germination of EBs to RBs; mid-cycle, which appear between 6 and 12 h after infection and represent transcripts expressed during the growth and multiplication of RBs; or late, which appear between 12 and 20 h after infection and represent those genes transcribed during the terminal differentiation of RBs to EBs. Collectively, the data suggest that chlamydial early gene functions are weighted toward initiation of macromolecular synthesis and the establishment of their intracellular niche by modification of the inclusion membrane. Surprisingly, representative enzymes of intermediary metabolism and structural proteins do not appear to be transcribed until 10,12 h after infection; coinciding with the onset of observed binary fission of RBs. Late gene functions appear to be predominately those associated with the terminal differentiation of RBs back to EBs. [source] Domestic Transitions, Desiccation, Agricultural Intensification, and Livelihood Diversification among Rural Households on the Central Plateau, Burkina FasoAMERICAN ANTHROPOLOGIST, Issue 3 2009Colin Thor West ABSTRACT Understanding how and why domestic groups alter their function and form has long been a theme within anthropology. Numerous accounts have detailed the processes that drive household transformations and their underlying mechanisms. Mostly, these studies describe how domestic groups fission and fuse between extended and nuclear forms. In recent years, scholars have emphasized that these transformations should be understood within larger contexts of social and environmental change. Mossi communities on the Central Plateau of Burkina Faso provide an excellent opportunity to explore such processes because the large extended households documented 30 years ago were predicted to decline and eventually disappear. In this study, I examine dynamics of household transformations and test the validity of this prediction. I use perspectives from sustainability science and computer-simulation modeling to understand how regional desiccation, agricultural intensification, and livelihood diversification articulate with domestic transitions. [source] Fission processes following core level excitation in closo -1,2-orthocarboranePHYSICA STATUS SOLIDI (B) BASIC SOLID STATE PHYSICS, Issue 7 2009E. Rühl Abstract Time-of-flight mass analysis with multi-stop coincidence detection was used to study the multi-cation ionic fragmentation of the closo carborane cage molecule closo -1,2-orthocarborane (C2B10H12) following inner-shell excitation in or above the B 1s regime. Electron ion coincidence spectra reveal the cationic products which are formed after core level excitation. Distinct changes in fragmentation pattern are observed as a function of excitation energy. Photoelectron,photoion,photoion coincidence (PEPIPICO) spectroscopy was used to study the dominant fission routes in the core level excitation regime. Series of ion pairs are identified, where asymmetric fission dominates, leading to ion pairs of different mass. Suitable fission and fragmentation mechanisms are discussed. (© 2009 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim) [source] | |||||||||||||||||||||||||||||||