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Selected AbstractsMaintaining Case-Based Reasoners: Dimensions and DirectionsCOMPUTATIONAL INTELLIGENCE, Issue 2 2001David C. Wilson Experience with the growing number of large-scale and long-term case-based reasoning (CBR) applications has led to increasing recognition of the importance of maintaining existing CBR systems. Recent research has focused on case-base maintenance (CBM), addressing such issues as maintaining consistency, preserving competence, and controlling case-base growth. A set of dimensions for case-base maintenance, proposed by Leake and Wilson, provides a framework for understanding and expanding CBM research. However, it also has been recognized that other knowledge containers can be equally important maintenance targets. Multiple researchers have addressed pieces of this more general maintenance problem, considering such issues as how to refine similarity criteria and adaptation knowledge. As with case-base maintenance, a framework of dimensions for characterizing more general maintenance activity, within and across knowledge containers, is desirable to unify and understand the state of the art, as well as to suggest new avenues of exploration by identifying points along the dimensions that have not yet been studied. This article presents such a framework by (1) refining and updating the earlier framework of dimensions for case-base maintenance, (2) applying the refined dimensions to the entire range of knowledge containers, and (3) extending the theory to include coordinated cross-container maintenance. The result is a framework for understanding the general problem of case-based reasoner maintenance (CBRM). Taking the new framework as a starting point, the article explores key issues for future CBRM research. [source] Performance of the Panleucogating protocol for CD4+ T cell enumeration in an HIV dedicated laboratory facility in Barbados,,CYTOMETRY, Issue S1 2008Namrata Sippy-Chatrani Abstract Objective: To compare the Panleucogating (PLG) protocol with the routinely used four-color protocol for CD4+ T cell count enumeration. Design and Methods: One hundred fifty-three blood samples were randomly selected from samples received at the National HIV Laboratory for routine immunological monitoring. Samples were prepared using Coulter CYTO-STAT® tetraCHROME monoclonal antibodies and FlowCAREÔ PLG CD4 reagent for four-color and PLG, respectively, and analyzed on the Beckman Coulter EPICS XL flow cytometer. The PLG protocol used a sequential gating strategy where CD4+ T cells were identified using side scatter properties of cells and CD45 staining. The four-color protocol used CD45 and CD3 to identify CD4+ T cells. Results: Absolute CD4+ T cell counts and percentages ranged from 4 to 1,285 cells/,L and 0.9 to 46.7%, respectively. Linear regression analyses revealed good correlation of PLG with the four-color protocol (absolute counts, R2 = 0.95; percentages, R2 = 0.98) over the entire range including the clinically relevant range. Bland Altman statistics revealed no bias for CD4 counts <500 cells/,L and a slight underestimation by PLG for counts >500 cells/,L (Bias = ,32.7 cells/,L; 95% agreement limits = ,151.3, +86.0). CD4+ T cell percentages were the similar over the entire range (Bias = 0.6%; 95% agreement limits = ,1.97 ± 3.18). Conclusions: PLG is an accurate method for enumerating CD4+ T cells and has resulted in major cost savings to the Government of Barbados. This has implications for the sustainability of the National HIV containment program in Barbados and the other resource limited Caribbean countries. The PLG technique is now being routinely used in Barbados. © 2008 Clinical Cytometry Society [source] Gut content analysis and a new feeding group classification of termitesECOLOGICAL ENTOMOLOGY, Issue 4 2001S. E. Donovan Summary 1. Gut content analysis of termites was undertaken using microscopical techniques. The 46 study species covered the entire range of taxonomic and feeding forms within the Order. 2. Inter-specific gut contents data were analysed using principal components analysis, placing species along a clear humification gradient based on variations in the amount of silica and plant tissue fragments in the gut. 3. Redundancy analysis was used to find morphological correlates of the observed variation in gut contents. A total of 22 morphological characters (out of 45 candidate characters) were correlated significantly with the gut contents. 4. Three of the 22 significantly correlated characters unambiguously defined feeding groups, which were designated groups I to IV in increasing order of humification of the feeding substrate. Group I contains lower termite dead wood and grass-feeders; group II contains Termitidae with a range of feeding habits including dead wood, grass, leaf litter, and micro-epiphytes; group III contains Termitidae feeding in the organic rich upper layers of the soil; group IV contains the true soil-feeders (again all Termitidae), ingesting apparently mineral soil. These groupings were generally supported statistically in a canonical covariance analysis, although group II apparently represents termite species with a rather wide range of feeding habits. 5. Using existing hypotheses of termite phylogenetic relationships, it seems probable that group I feeders are phylogenetically basal, and that the other groupings have arisen independently on a number of occasions. Soil-feeding (i.e. group III and group IV feeding) may have evolved due to the co-option of faecal material as a fungal substrate by Macrotermitinae-like ancestral forms. As a consequence, these forms would have been constrained to build nest structures from soil and would therefore have passed at least some soil through their guts. [source] The Wealth Effect on New Business Startups in a Developing EconomyECONOMICA, Issue 291 2006ALICE MESNARD The paper tests for nonlinearities in the wealth effect on self-employment, as can arise from startup costs or liquidity constraints. Using both nonparametric and parametric methods, we show that the relationship between the probability of a return migrant to Tunisia starting up a business and the stock of his savings repatriated at return is concave for almost the entire range of our data, though we find weak evidence of a convex relationship at very low wealth levels. Our results suggest that the aggregate self-employment rate is an increasing function of aggregate wealth, but a decreasing function of wealth inequality. [source] Microbial response to salinity change in Lake Chaka, a hypersaline lake on Tibetan plateauENVIRONMENTAL MICROBIOLOGY, Issue 10 2007Hongchen Jiang Summary Previous investigations of the salinity effects on the microbial community composition have largely been limited to dynamic estuaries and coastal solar salterns. In this study, the effects of salinity and mineralogy on microbial community composition was studied by using a 900-cm sediment core collected from a stable, inland hypersaline lake, Lake Chaka, on the Tibetan Plateau, north-western China. This core, spanning a time of 17 000 years, was unique in that it possessed an entire range of salinity from freshwater clays and silty sands at the bottom to gypsum and glauberite in the middle, to halite at the top. Bacterial and archaeal communities were studied along the length of this core using an integrated approach combining mineralogy and geochemistry, molecular microbiology (16S rRNA gene analysis and quantitative polymerase chain reaction), cultivation and lipid biomarker analyses. Systematic changes in microbial community composition were correlated with the salinity gradient, but not with mineralogy. Bacterial community was dominated by the Firmicutes -related environmental sequences and known species (including sulfate-reducing bacteria) in the freshwater sediments at the bottom, but by halophilic and halotolerant Betaproteobacteria and Bacteroidetes in the hypersaline sediments at the top. Succession of proteobacterial groups along the salinity gradient, typically observed in free-living bacterial communities, was not observed in the sediment-associated community. Among Archaea, the Crenarchaeota were predominant in the bottom freshwater sediments, but the halophilic Halobacteriales of the Euryarchaeota was the most important group in the hypersaline sediments. Multiple isolates were obtained along the whole length of the core, and their salinity tolerance was consistent with the geochemical conditions. Iron-reducing bacteria were isolated in the freshwater sediments, which were capable of reducing structural Fe(III) in the Fe(III)-rich clay minerals predominant in the source sediment. These data have important implications for understanding how microorganisms respond to increased salinity in stable, inland water bodies. [source] Delusion symptoms are associated with ApoE ,4 allelic variant at the early stage of Alzheimer's disease with late onsetEUROPEAN JOURNAL OF NEUROLOGY, Issue 2 2006G. Spalletta Alzheimer's disease (AD) is a neurodegenerative disorder with mixed cognitive and behavioural clinical manifestations. The possession of apolipoprotein-E (ApoE) ,4 allelic variant is one of the most important risk factors for developing late-onset AD (LOAD). In this study we analysed the relationship between the entire range of behavioural symptoms, cognitive deficit, and sociodemographic characteristics and ApoE ,4 allele possession with multivariate logistic regression models in LOAD patients. Patients included (n = 171) were consecutively admitted in a memory clinic for the first diagnostic visit. Levels of behaviour and cognition within the last month were assessed by the Neuropsychiatric Inventory and Mini Mental State Examination. Presence of clinically significant psychosis, delusions and hallucinations at the early stage of the illness, from the onset to the first visit, was measured with diagnostic criteria. ApoE ,4 allele possession was associated with increased levels of delusions within the last month from the first visit (OR 1.23; 95% CI 1.01,1.50; P < 0.05) and with the presence of categorical delusions at the early stage until the first visit (OR 3.11; 95% CI 1.21,8.01; P < 0.02). In this study, which considers the entire range of behavioural expressions in LOAD patients at the early stage of the illness, the relationship between behaviour and ApoE ,4 allele is confirmed for delusions only. [source] COMPARATIVE GENOMIC AND POPULATION GENETIC ANALYSES INDICATE HIGHLY POROUS GENOMES AND HIGH LEVELS OF GENE FLOW BETWEEN DIVERGENT HELIANTHUS SPECIESEVOLUTION, Issue 8 2009Nolan C. Kane While speciation can be found in the presence of gene flow, it is not clear what impact this gene flow has on genome- and range-wide patterns of differentiation. Here we examine gene flow across the entire range of the common sunflower, H. annuus, its historically allopatric sister species H. argophyllus and a more distantly related, sympatric relative H. petiolaris. Analysis of genotypes at 26 microsatellite loci in 1015 individuals from across the range of the three species showed substantial introgression between geographically proximal populations of H. annuus and H. petiolaris, limited introgression between H. annuus and H. argophyllus, and essentially no gene flow between the allopatric pair, H. argophyllus and H. petiolaris. Analysis of sequence divergence levels among the three species in 1420 orthologs identified from EST databases identified a subset of loci showing extremely low divergence between H. annuus and H. petiolaris and extremely high divergence between the sister species H. annuus and H. argophyllus, consistent with introgression between H. annuus and H. petiolaris at these loci. Thus, at many loci, the allopatric sister species are more genetically divergent than the more distantly related sympatric species, which have exchanged genes across much of the genome while remaining morphologically and ecologically distinct. [source] Application of a simple enthalpy-based pyrolysis model in numerical simulations of pyrolysis of charring materialsFIRE AND MATERIALS, Issue 1 2010S. R. Wasan Abstract A new, simple pyrolysis model for charring materials is applied to several numerical and experimental test cases with variable externally imposed heat fluxes. The model is based on enthalpy. A piecewise linear temperature field representation is adopted, in combination with an estimate for the pyrolysis front position. Chemical kinetics are not accounted for: the pyrolysis process takes place in an infinitely thin front, at the ,pyrolysis temperature'. The evolution in time of pyrolysis gases mass flow rates and surface temperatures is discussed. The presented model is able to reproduce numerical reference results, which were obtained with the more complex moving mesh model. It performs better than the integral model. We illustrate good agreement with numerical reference results for variable thickness and boundary conditions. This reveals that the model provides good results for the entire range of thermally thin and thermally thick materials. It also shows that possible interruption of the pyrolysis process, due to excessive heat losses, is automatically predicted with the present approach. Finally, an experimental test case is considered. Copyright © 2009 John Wiley & Sons, Ltd. [source] Discrete Bose-Einstein systems in a box with low adiabatic invariantFORTSCHRITTE DER PHYSIK/PROGRESS OF PHYSICS, Issue 4-5 2003V.I. Vlad The Bose-Einstein energy spectrum of an ideal quantum gas confined in a box is discrete and strongly dependent on the box geometry and temperature, for low product of the atomic mass number, Aat and the adiabatic invariant, TV2/3, i.e. on , = Aat TV2/3. Even within the approximation of non-interacting particles in the gas, the calculation of the thermodynamic properties of Bose-Einstein systems turns out to be a difficult mathematical problem. The present study compares the total number of particles, the total energy and the specific heat obtained by sums over the discrete states to the results of the approximate integrals (for defined values of ,) and shows the noticeable errors of the last ones at low adiabatic invariant (around condensation). Then, more rigorous and precise analytical approximations of sums are found in the case of finite number of atoms (correlated with the existence of a zero energy level) and the finite volume of the gas. The corrected thermodynamic functions depend on , (for fixed fugacity). The condensation temperature is corrected also in order to describe more accurately the discrete Bose-Einstein systems. Under these circumstances, the analysis of the specific heat leads to the conclusion that it shows no discontinuity, for the entire range of , values. [source] Influences of habitat complexity on the diversity and abundance of epiphytic invertebrates on plantsFRESHWATER BIOLOGY, Issue 4 2003Hiromi Taniguchi SUMMARY 1. The compound influence of habitat complexity and patch size on stream invertebrate assemblages associated with submerged macrophytes was investigated through field sampling of two natural macrophyte species with contrasting leaf morphologies (complex, Ranunculus yezoensis; simple, Sparganium emersum) and an experiment with two artificial plants with different levels of morphological complexity. 2. The artificial plant experiment was designed to separate the effects of habitat area (patch size) and habitat complexity, thus enabling a more rigorous assessment of complexity per se than in previous studies where only a single patch size was used. Simple and complex artificial plants were established with five different patch sizes corresponding to the range found in natural plants. 3. Invertebrates occurred on both complex and simple forms of natural and artificial plants at similar abundances with dipterans and ephemeropterans being predominant. Taxon richness was higher on structurally complex Ranunculus than on simple Sparganium and was similarly higher on the complex artificial plant than on the simple one, over the entire range of habitat patch sizes. Thus, architectural complexity affected the taxon richness of epiphytic invertebrates, independently of habitat scale. 4. On the natural plants there was no difference in the abundance (both number of individuals and biomass) of invertebrates between simple and complex forms, while on artificial plants more invertebrates occurred on complex than on simple forms. The amount of particulate organic matter, >225 ,m (POM) and chlorophyll a showed mixed patterns on natural and artificial plants, suggesting that the availability of these resources is not an overriding proximate factor controlling invertebrate abundance on plants. The difficulty of extrapolating from experimental results involving use of artificial plants is discussed, especially when considering the relationship between habitat structure and the occurrence of epiphytic invertebrates on natural plants. [source] On accuracy of the finite-difference and finite-element schemes with respect to P -wave to S -wave speed ratioGEOPHYSICAL JOURNAL INTERNATIONAL, Issue 1 2010Peter Moczo SUMMARY Numerical modelling of seismic motion in sedimentary basins often has to account for P -wave to S -wave speed ratios as large as five and even larger, mainly in sediments below groundwater level. Therefore, we analyse seven schemes for their behaviour with a varying P -wave to S -wave speed ratio. Four finite-difference (FD) schemes include (1) displacement conventional-grid, (2) displacement-stress partly-staggered-grid, (3) displacement-stress staggered-grid and (4) velocity,stress staggered-grid schemes. Three displacement finite-element schemes differ in integration: (1) Lobatto four-point, (2) Gauss four-point and (3) Gauss one-point. To compare schemes at the most fundamental level, and identify basic aspects responsible for their behaviours with the varying speed ratio, we analyse 2-D second-order schemes assuming an elastic homogeneous isotropic medium and a uniform grid. We compare structures of the schemes and applied FD approximations. We define (full) local errors in amplitude and polarization in one time step, and normalize them for a unit time. We present results of extensive numerical calculations for wide ranges of values of the speed ratio and a spatial sampling ratio, and the entire range of directions of propagation with respect to the spatial grid. The application of some schemes to real sedimentary basins in general requires considerably finer spatial sampling than usually applied. Consistency in approximating first spatial derivatives appears to be the key factor for the behaviour of a scheme with respect to the P -wave to S -wave speed ratio. [source] Microplane constitutive model for porous isotropic rocksINTERNATIONAL JOURNAL FOR NUMERICAL AND ANALYTICAL METHODS IN GEOMECHANICS, Issue 1 2003k P. Ba Abstract The paper deals with constitutive modelling of contiguous rock located between rock joints. A fully explicit kinematically constrained microplane-type constitutive model for hardening and softening non-linear triaxial behaviour of isotropic porous rock is developed. The microplane framework, in which the constitutive relation is expressed in terms of stress and strain vectors rather than tensors, makes it possible to model various microstructural physical mechanisms associated with oriented internal surfaces, such as cracking, slip, friction and splitting of a particular orientation. Formulation of the constitutive relation is facilitated by the fact that it is decoupled from the tensorial invariance restrictions, which are satisfied automatically. In its basic features, the present model is similar to the recently developed microplane model M4 for concrete, but there are significant improvements and modifications. They include a realistic simulation of (1) the effects of pore collapse on the volume changes during triaxial loading and on the reduction of frictional strength, (2) recovery of frictional strength during shearing, and (3) the shear-enhanced compaction in triaxial tests, manifested by a deviation from the hydrostatic stress,strain curve. The model is calibrated by optimal fitting of extensive triaxial test data for Salem limestone, and good fits are demonstrated. Although these data do not cover the entire range of behaviour, credence in broad capabilities of the model is lend by its similarity to model M4 for concrete,an artificial rock. The model is intended for large explicit finite-element programs. Copyright © 2002 John Wiley & Sons, Ltd. [source] Ab initio study of the OH + CH2O reaction: The effect of the OH··OCH2 complex on the H-abstraction kineticsINTERNATIONAL JOURNAL OF CHEMICAL KINETICS, Issue 5 2006Shucheng Xu Kinetics for the reaction of OH radical with CH2O has been studied by single-point calculations at the CCSD(T)/6-311+G(3df, 2p) level based on the geometries optimized at the B3LYP/6-311+G(3df, 2p) and CCSD/6-311++G(d,p) levels. The rate constant for the reaction has been computed in the temperature range 200,3000 K by variational transition state theory including the significant effect of the multiple reflections above the OH··OCH2 complex. The predicted results can be represented by the expressions k1 = 2.45 × 10 -21T2.98 exp (1750/T) cm3 mol,1 s,1 (200,400 K) and 3.22 × 10 -18T2.11 exp(849/T) cm3 mol,1 s,1 (400,3000 K) for the H-abstraction process and k2 = 1.05 × 10 -17T1.63 exp(,2156/T) cm3 mol,1 s,1 in the temperature range of 200,3000 K for the HO-addition process producing the OCH2OH radical. The predicted total rate constants (k1 + k2) can reproduce closely the recommended kinetic data for OH + CH2O over the entire range of temperature studied. © 2006 Wiley Periodicals, Inc. Int J Chem Kinet 38: 322,326, 2006 [source] Performance of robust symbol-timing and carrier-frequency estimation for OFDM systemsINTERNATIONAL JOURNAL OF COMMUNICATION SYSTEMS, Issue 5 2009Nan-Yang YenArticle first published online: 7 NOV 200 Abstract In recent years, many maximum likelihood (ML) blind estimators have been proposed to estimate timing and frequency offsets for orthogonal frequency division multiplexing (OFDM) systems. However, the previously proposed ML blind estimators utilizing cyclic prefix do not fully characterize the random observation vector over the entire range of the timing offset and will significantly degrade the estimation performance. In this paper, we present a global ML blind estimator to compensate the estimation error. Moreover, we extend the global ML blind estimator by accumulating the ML function of the estimation parameters to achieve a better accuracy without increasing the hardware or computational complexity. The simulation results show that the proposed algorithm can significantly improve the estimation performance in both additional white Gaussian noise and ITU-R M.1225 multipath channels. Copyright © 2008 John Wiley & Sons, Ltd. [source] Studies on pyrolysis of vegetable market wastes in presence of heat transfer resistance and deactivationINTERNATIONAL JOURNAL OF ENERGY RESEARCH, Issue 9 2005Ruby Ray Abstract In the present investigation, the pyrolysis of predried vegetable market waste (dp=5.03 mm) has been studied using a cylindrical pyrolyser having diameter of 250 mm under both isothermal and non-isothermal conditions within the temperature range of 523,923 K with an intention to investigate the effective contribution of different heat transfer controlling regime namely intra-particle, external along with kinetically control regime on the overall global rate of pyrolysis. Thermogravimetric method of analysis was utilized to obtain experimental data for both isothermal and non-isothermal cases by coupling a digital balance with the pyrolyser. The pyrolysis of vegetable market waste has been observed to exhibit deactivated concentration independent pyrolysis kinetics, analogous to catalytic poisoning, throughout the entire range of study. The deactivation is of 1st order up to 723 K and follows the 3rd order in the temperature range of 723 Applicability of the International Classification of Nursing Practice (ICNP®) in the Areas of Nutrition and Skin CareINTERNATIONAL JOURNAL OF NURSING TERMINOLOGIES AND CLASSIFICATION, Issue 1 2003Margareta Ehnfors PhD PURPOSE. To evaluate completeness, granularity, multiple axial content, and clinical utility of the beta version of the ICNP® in the context of standardized nursing care planning in a clinical setting. METHODS. An 35-bed acute care ward for infectious diseases at a Swedish university hospital was selected for clinical testing. A convenience sample of 56 patient records with data on nutrition and skin care was analyzed and mapped to the ICNP. FINDINGS. Using the ICNP terminology, 59%-62% of the record content describing nursing phenomena and 30%-44% of the nursing interventions in the areas of nutrition and skin care could be expressed satisfactorily. For about a quarter of the content describing nursing phenomena and interventions, no corresponding ICNP term was found. CONCLUSIONS. The ICNP needs to be further developed to allow representation of the entire range of nursing care. Terms need to be developed to express patient participation and preferences, normal conditions, qualitative dimensions and characteristics, nonhuman focus, and duration. PRACTICE IMPLICATIONS. The practical usefulness of the ICNP needs further testing before conclusions about its clinical benefits can be determined. Search terms: ICNP®, nursing classification, standardized terminology, VIPS [source] In-situ small-angle neutron scattering study of pore filling and pore emptying in ordered mesoporous silicaJOURNAL OF APPLIED CRYSTALLOGRAPHY, Issue 1 2010M. Erko The capillary condensation and capillary emptying of water and perfluoropentane in ordered mesoporous SBA-15 silica is studied by in-situ small-angle neutron scattering (SANS). The SANS data can be perfectly described by a simple analytical model for spatially random pore filling (Laue scattering) for the entire range of pore-filling fractions. From this it is concluded that recently proposed pore correlations due to elastic interactions between neighbouring pores upon capillary condensation do not play a role in this system. The pores fill randomly according to their size distribution, in perfect agreement with the classical Kelvin equation. The relation between the overall pore-filling fraction as determined from the volumetric sorption isotherm, and the fraction of completely filled pores as obtained from the fit of the SANS data, allows conclusions to be drawn about the thermodynamic metastability of the adsorption process. [source] Relationship between stroke volume, cardiac output and filling of the heart during tiltACTA ANAESTHESIOLOGICA SCANDINAVICA, Issue 10 2009M. BUNDGAARD-NIELSEN Background: Cardiac function curves are widely accepted to apply to humans but are not established for the entire range of filling of the heart that can be elicited during head-up (HUT) and head-down tilt (HDT), taken to represent minimal and maximal physiological filling of the heart, respectively. With the supine resting position as a reference, we assessed stroke volume (SV), cardiac output (CO) and filling of the heart during graded tilt to evaluate whether SV and CO are maintained during an assumed maximal physiological filling of the heart elicited by 90° HDT in healthy resting humans. Methods: In 26 subjects, central blood volume was manipulated with graded tilt from 60° HUT to 90° HDT. We measured SV, CO (Finometer®) and cardiac filling by echocardiography of the left ventricular end-diastolic volume (LVEDV; n=12). Results: From supine rest to 60° HUT, SV and CO decreased 23 ml [confidence intervals (CI): 16,30; P<0.001; 23%] and 0.9 l/min (0.4,1.4; P<0.0001; 14%), respectively, but neither SV nor CO changed during HDT up to 70°. However, during 90° HDT, SV decreased 12 ml (CI: 6,19; P<0.0001; 12%), with an increase of 21 ml (9,33; P=0.002; 16%) in LVEDV because HR increased 3 bpm and CO decreased 0.5 l/min (ns). Conclusion: This study confirmed that SV and CO are maximal in resting, supine, healthy humans and decrease during HUT. However, 90° HDT was associated with increased LVEDV and induced a reduction in SV. [source] Contrasting patterns of nuclear microsatellite genetic structure of Fraxinus mandshurica var. japonica between northern and southern populations in JapanJOURNAL OF BIOGEOGRAPHY, Issue 6 2010Li-Jiang Hu Abstract Aim, The aim of this study is to detect extant patterns of population genetic structure of Fraxinus mandshurica var. japonica in Japan, and to provide insights into the post-glacial history of this species during the Holocene. Location, Hokkaido and Honshu islands, Japan (including the Oshima and Shimokita peninsulas). Methods, We examined nine polymorphic nuclear microsatellite loci to assess genetic variation within and among 15 populations across almost the entire range of the species in Japan. Extant patterns of geographical structure were analysed using Bayesian clustering, Monmonier's algorithm, analysis of molecular variance, Mantel tests and principal coordinates analysis. Recent bottlenecks within populations and regional genetic variation were also assessed. Results, Northern populations (Hokkaido Island and the Shimokita Peninsula) formed a single homogeneous deme, maintaining the highest level of allelic diversity on the Oshima Peninsula. By contrast, southern populations (Honshu Island) demonstrated strong substructure on both coasts. Specifically, populations on the Pacific side of Honshu exhibited significant bottlenecks and erosion of allelic diversity but preserved distinct subclusters diverging from widespread subclusters on the Japan Sea side of this island. Main conclusions, Genetic evidence and life history traits suggest that F. mandshurica occupied cryptic northern refugia on the Oshima Peninsula during the Last Glacial Maximum, which is reflected in the species' extant northern distribution. Strong geographical structure in southern populations, in agreement with fossil pollen records, suggests geographical isolation by mountain ranges running north,south along Honshu. Given that this tree species is cold-adapted and found in riparian habitats, populations on the Pacific side of Honshu probably contracted into higher-elevation swamps during warm post-glacial periods, leading to a reduction of effective population sizes and rare allelic richness. [source] Phylogeographical structure in the coastal species Senecio rodriguezii (Asteraceae), a narrowly distributed endemic Mediterranean plantJOURNAL OF BIOGEOGRAPHY, Issue 7 2009Arántzazu Molins Abstract Aim, Our goals were (1) to assess the levels of chloroplast DNA variation in a narrowly distributed plant restricted to continental islands, (2) to ascertain whether a phylogeographical structure is present in plants restricted to coastal linear systems, and (3) to interpret the results in the light of the known palaeogeography of these islands. Location, The Eastern Balearic Islands (Majorca and Minorca) in the Western Mediterranean Basin. Methods, Sampling included 134 individuals from 28 populations of Senecio rodriguezii covering the entire range of the species. Sequences of the chloroplast genome (trnT,trnL spacer) were obtained and parameters of population genetic diversity and substructure were determined (hsht, Gst). The geographical structure of genetic variation was assessed by an analysis of molecular variance (AMOVA). Additionally, a spatial AMOVA (SAMOVA) was used to identify groups of populations that were geographically homogeneous and maximally differentiated from each other. Finally, a pattern of isolation by distance was assessed by testing the correlation between the matrix of pairwise ,ST values and the matrix of geographical distances between pairs of populations using a Mantel test. Results, Seven haplotypes were detected in S. rodriguezii. Only two of them were shared between islands; all of the others were restricted to Majorca (two) or Minorca (three). Overall, we found high levels of genetic diversity and significant geographical structuring of cpDNA markers. Most of the variation detected can be attributed to differences among populations (84.6%), but there was also a significant differentiation between the islands. Main conclusions, Our results support the view that the Balearic Islands constitute a reservoir of genetic diversity, not only for widespread Mediterranean taxa, but also for endemic ones. The intraspecific genetic structure found in S. rodriguezii suggests that its population history was dominated by both expansion and contraction events. This has resulted in a species that is highly structured genetically, showing very few shared haplotypes between islands, and a high number of haplotypes restricted to small geographical areas within the islands. Changes in habitat availability and dynamic processes of population fragmentation and connectivity due to repeated cycles of sea-level changes during the Quaternary are the possible underlying factors that have shaped the cpDNA pool of this endemic species on a regional scale. [source] Genetic divergences pre-date Pleistocene glacial cycles in the New Zealand speckled skink, Oligosoma infrapunctatumJOURNAL OF BIOGEOGRAPHY, Issue 5 2008Stephanie N. J. Greaves Abstract Aim, To examine the hypothesis raised by Graham S. Hardy that Pleistocene glacial cycles suffice to explain divergence among lineages within the endemic New Zealand speckled skink, Oligosoma infrapunctatum Boulenger. Location, Populations were sampled from across the entire range of the species, on the North and South Islands of New Zealand. Methods, We sequenced the mitochondrial genes ND2 (550 bp), ND4 + tRNAs (773 bp) and cytochrome b (610 bp) of 45 individuals from 21 locations. Maximum likelihood, maximum parsimony and Bayesian methods were used for phylogenetic reconstruction. The Shimodaira,Hasegawa test was used to examine hypotheses about the taxonomic status of morphologically distinctive populations. Results, Our analysis revealed four strongly supported clades within O. infrapunctatum. Clades were largely allopatric, except on the west coast of the South Island, where representatives from all four clades were found. Divergences among lineages within the species were extremely deep, reaching over 5%. Two contrasting phylogeographical patterns are evident within O. infrapunctatum. Main conclusions, The deep genetic divisions we found suggest that O. infrapunctatum is a complex of cryptic species which diverged in the Pliocene, contrary to the existing Pleistocene-based hypothesis. Although Pleistocene glacial cycles do not underlie major divergences within this species, they may be responsible for the shallower phylogeographical patterns that are found within O. infrapunctatum, which include a radiation of haplotypes in the Nelson and Westland regions. [source] Capital Structure and Firm EfficiencyJOURNAL OF BUSINESS FINANCE & ACCOUNTING, Issue 9-10 2007Dimitris Margaritis Abstract:, This paper investigates the relationship between firm efficiency and leverage. We consider both the effect of leverage on firm performance as well as the reverse causality relationship. In particular, we address the following questions: Does higher leverage lead to better firm performance? Does efficiency exert a significant effect on leverage over and above that of traditional financial measures of capital structure? Is the effect of efficiency on leverage similar across different capital structures? What is the signalling role of efficiency to creditors or investors? Using a sample of 12,240 New Zealand firms we find evidence supporting the theoretical predictions of the Jensen and Meckling (1976) agency cost model. Efficiency measured as the distance from the industry's ,best practice' production frontier is positively related to leverage over the entire range of observed data. The frontier is constructed using the non-parametric Data Envelopment Analysis (DEA) method. Using quantile regression analysis we show that the reverse causality effect of efficiency on leverage is positive at low to mid-leverage levels and negative at high leverage ratios. Firm size also has a non-monotonic effect on leverage: negative at low debt ratios and positive at mid to high debt ratios. The effect of tangibles and profitability on leverage is positive while intangibles and other assets are negatively related to leverage. [source] Adaptation and evaluation of the Randox full-range CRP assay on the Olympus AU2700®JOURNAL OF CLINICAL LABORATORY ANALYSIS, Issue 1 2007A.M. Dupuy Abstract The implementation of a high-sensitivity CRP (hs-CRP) assay as a routine laboratory parameter may be necessary. A single CRP method that could yield reliable results for the whole concentration range (0.1,200 mg/L) would be the most practical solution for the laboratory setting. The aim of this study was to assess the Randox full-range CRP assay on the Olympus AU2700® biochemistry analyzer and evaluate its analytical performance on serum and heparin plasma samples. The Randox CRP turbidimetric assay was compared with the existing CRP assay used routinely on the Olympus AU2700®. The analytical performance of the Randox CRP with both Olympus CRP reagents (CRP for normal application andhs-CRP) was good. We found that the Randox CRP method in the range of 0.5,160 mg/L was closely correlated to the Olympus CRP and hs-CRP for serum samples. According to a Bland-Altman analysis, the serum and heparinized samples showed an excellent agreement in CRP concentrations throughout the entire range (mean difference = ,0.035 ± 1.806 mg/L) as well as in CRP levels <10 mg/L. Our data indicate that Randox full-range CRP measurements using an immunoturbidimetry assay on Olympus systems perform as well for routine diagnostics as other high-sensitivity applications using serum or heparin plasma. J. Clin. Lab. Anal. 21:34,39, 2007. © 2007 Wiley-Liss, Inc. [source] Measuring diagnostic and predictive accuracy in disease management: an introduction to receiver operating characteristic (ROC) analysisJOURNAL OF EVALUATION IN CLINICAL PRACTICE, Issue 2 2006Ariel Linden DrPH MS Abstract Diagnostic or predictive accuracy concerns are common in all phases of a disease management (DM) programme, and ultimately play an influential role in the assessment of programme effectiveness. Areas, such as the identification of diseased patients, predictive modelling of future health status and costs and risk stratification, are just a few of the domains in which assessment of accuracy is beneficial, if not critical. The most commonly used analytical model for this purpose is the standard 2 × 2 table method in which sensitivity and specificity are calculated. However, there are several limitations to this approach, including the reliance on a single defined criterion or cut-off for determining a true-positive result, use of non-standardized measurement instruments and sensitivity to outcome prevalence. This paper introduces the receiver operator characteristic (ROC) analysis as a more appropriate and useful technique for assessing diagnostic and predictive accuracy in DM. Its advantages include; testing accuracy across the entire range of scores and thereby not requiring a predetermined cut-off point, easily examined visual and statistical comparisons across tests or scores, and independence from outcome prevalence. Therefore the implementation of ROC as an evaluation tool should be strongly considered in the various phases of a DM programme. [source] HEAT TRANSFER TO CANNED PARTICULATES IN HIGH-VISCOSITY NEWTONIAN FLUIDS DURING AGITATION PROCESSINGJOURNAL OF FOOD PROCESSING AND PRESERVATION, Issue 6 2006YANG MENG ABSTRACT Heat transfer to canned particulate-laden Newtonian high-viscous fluids (Nylon particles suspended in aqueous glycerin solution [40, 60, 80, 90 and 100%, v/v] and motor oil [85W140]) during end-over-end rotation was studied in a pilot-scale, full water-immersion single-cage rotary retort. Computations of conventional fluid-to-particle heat transfer coefficient (hfp) and overall heat transfer coefficient (U) were successful with multiple particles for an entire range of viscosity, but the predicted particle lethality was underestimated. With a single particle in the can, hfpand U calculations were successful only for low-viscosity fluids (40 and 60% glycerin solutions), but again resulted in underestimation of particle lethality. Apparent heat transfer coefficients (hap) between retort and particle surface and apparent overall heat transfer coefficient (Ua) were also evaluated, and this methodology worked well for all cases. Further, the particle lethality predicted using hap better matched the measured values. With a single particle in the can, the associated hap was significantly (P < 0.05) influenced by rotation speed, retort temperature, liquid viscosity, particle material and can size. Ua was significantly (P < 0.05) influenced by rotation speed and liquid viscosity. The effects of headspace, radius of rotation and particle size were not significant (P > 0.05) on hap and Ua values. [source] Kinematics of the knee at high flexion angles: An in vitro investigationJOURNAL OF ORTHOPAEDIC RESEARCH, Issue 1 2004Guoan Li Abstract Restoration of knee function after total knee, meniscus, or cruciate ligament surgery requires an understanding of knee behavior throughout the entire range of knee motion. However, little data are available regarding knee kinematics and kinetics at flexion angles greater than 120° (high flexion). In this study, 13° cadaveric human knee specimens were tested using an in vitro robotic experimental setup. Tibial anteroposterior translation and internal,external rotation were measured along the passive path and under simulated muscle loading from full extension to 150° of flexion. Anterior tibial translation was observed in the unloaded passive path throughout, with a peak of 31.2 ± 13.2 mm at 150°. Internal tibial rotation increased with flexion to 150° on the passive path to a maximum of 11.1 ± 6.7°. The simulated muscle loads affected tibial translation and rotation between full extension and 120° of knee flexion. Interestingly, at high flexion, the application of muscle loads had little effect on tibial translation and rotation when compared to values at 120°. The kinematic behavior of the knee at 150° was markedly different from that measured at other flexion angles. Muscle loads appear to play a minimal role in influencing tibial translation and rotation at maximal flexion. The results imply that the knee is highly constrained at high flexion, which could be due in part to compression of the posterior soft tissues (posterior capsule, menisci, muscle, fat, and skin) between the tibia and the femur. © 2003 Orthopaedic Research Society. Published by Elsevier Ltd. All rights reserved. [source] NEURAL NETWORK PREDICTION OF PERMEABILITY IN THE EL GARIA FORMATION, ASHTART OILFIELD, OFFSHORE TUNISIAJOURNAL OF PETROLEUM GEOLOGY, Issue 4 2001J.H. Ligtenberg The Lower Eocene El Garia Formation forms the reservoir rock at the Ashtart oilfield, offshore Tunisia. It comprises a thick package of mainly nummulitic packstones and grainstones with variable reservoir quality. Although porosity is moderate to high, permeability is often poor to fair with some high permeability streaks. The aim of this study was to establish relationships between log-derived data and core data, and to apply these relationships in a predictive sense to uncored intervals. An initial objective was to predict from measured logs and core data the limestone depositional texture (as indicated by the Dunham classification), as well as porosity and permeability. A total of nine wells with complete logging suites, multiple cored intervals with core plug measurements together with detailed core interpretations were available. We used a fully-connected Multi-Layer-Perceptron network (a type of neural network) to establish possible non-linear relationships. Detailed analyses revealed that no relationship exists between log response and limestone texture (Dunham class). The initial idea to predict Dunham class, and subsequently to use the classification results to predict permeability, could not therefore be pursued. However, further analyses revealed that it was feasible to predict permeability without using the depositional fabric, but using a combination of wireline logs and measured core porosity. Careful preparation of the training set for the neural network proved to be very important. Early experiments showed that low to fair permeability (1,35 mD) could be predicted with confidence, but that the network failed to predict the high permeability streaks. "Balancing " the data set solved this problem. Balancing is a technique in which the training set is increased by adding more examples to the under-sampled part of the data space. Examples are created by random selection from the training set and white noise is added. After balancing, the neural network's performance improved significantly. Testing the neural network on two wells indicated that this method is capable of predicting the entire range of permeability with confidence. [source] Evaluation of fluorescent probe surface intensities as an indicator of transdermal permeant distributions using wide-area two-photon fluorescence microscopyJOURNAL OF PHARMACEUTICAL SCIENCES, Issue 12 2003Betty Yu Abstract The application of high-speed two-photon fluorescence microscopy (HTPM) to examine transdermal transport processes has enabled the noninvasive visualization of permeant spatial distributions over a larger, more clinically relevant wide area of the skin. Earlier studies demonstrated that the transdermal fluorescent probe distribution over a 2,×,2 mm skin area was well represented by a significantly reduced sampling of the 400 microscale skin sites (100,×,100 ,m) constituting the wide area. In the present study, the 400 microscale skin sites are considered individually, and the site-to-site variability in permeant distributions is used as a model to reflect the range in experimentally measured skin permeabilities resulting from the inherent stratum corneum structural heterogeneity. The correlation established between the permeant surface intensity and the corresponding permeant intensity gradient at each skin site provides an indication of the potential for screening transdermal permeant distributions solely based on the evaluation of microscale permeant surface intensities. The strong linear correlation between the intensity gradient and the surface intensity for the hydrophilic model permeant, sulforhodamine B, demonstrated that surface intensities provide a robust indicator of the corresponding transdermal probe distributions at the microscale. For the hydrophobic model permeant, rhodamine B hexyl ester, however, weak correlations were observed between these two parameters. This result suggests that the stratum corneum microscale surface intensity does not validly capture the corresponding intensity gradients for the entire range of skin permeabilities typically encountered as a result of the inherent stratum corneum heterogeneity. © 2003 Wiley-Liss, Inc. and the American Pharmacists Association J Pharm Sci 92:2354,2365, 2003 [source] RHEOLOGICAL PROPERTIES OF HOT PEPPER-SOYBEAN PASTEJOURNAL OF TEXTURE STUDIES, Issue 4 2001B. YOO Rheological properties of fermented hot pepper-soybean paste (HPSP) were evaluated at different total solid contents (TS, 43.6-54.7%) and temperatures (10-40C). HPSP samples at 20C are highly shear thinning fluids (n=0.25-0.33) with large magnitudes of Casson yield stresses (106-573 Pa). Consistency index (K) and apparent viscosity (,a,20) increased with increase in TS. Apparent viscosity of HPSP obeyed the Arrhenius temperature relationship. The magnitudes of activation energy (7.6-20.4 kJ/mole) for HPSP increased with increase in TS. A single equation, combining the effects of temperature and concentration on ,a,20, was used to describe flow behavior of HPSP. The time-dependent model of Weltman was found to be most applicable (R2= 0.97-0.99) for HPSP. Storage (G') and loss (G") moduli increased with increase in TS, while complex viscosity (,*) decreased. Magnitudes of G'were higher than those of G" over the entire range of frequencies (,). [source] PLP-SEC Study into the Free-Radical Propagation Rate Coefficients of Partially and Fully Ionized Acrylic Acid in Aqueous SolutionMACROMOLECULAR CHEMISTRY AND PHYSICS, Issue 8 2004Igor Lacík Abstract Summary: Propagation rate coefficients, kp, for acrylic acid (AA) polymerization at 6,°C in aqueous solution were measured via pulsed laser polymerization (PLP) with the degree of ionization, ,, varied over the entire range between 0 and 1. These measurements were carried out in conjunction with aqueous-phase size-exclusion chromatography (SEC). Strictly speaking, the reported kp's are "apparent" propagation rate coefficients deduced from the PLP-SEC data under the assumption that the local monomer concentration at the radical site is identical to overall monomer concentration. At an AA concentration of 0.69 mol,·,L,1, the apparent kp decreases from 111,000 L,·,mol,1,·,s,1 at ,,=,0 to 13,000 L,·,mol,1,·,s,1 at ,,=,1.0. The significant lowering of kp with higher , is attributed to the repulsion between both monomer molecules and macroradicals becoming negatively charged. Addition of up to 10 mol-% (with respect to AA) sodium hydroxide to the fully ionized aqueous AA solution leads to an enhancement of kp up to 57,000 L,·,mol,1,·,s,1. Dependence of apparent kp values on the degree of ionization of acrylic acid (a) and on pH (b) for aqueous polymerizations of acrylic acid. [source]
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