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Diversity Patterns (diversity + pattern)

Distribution by Scientific Domains

Life Sciences	81%
Earth and Environmental Science	5%

Distribution within Life Sciences

Ecology & Organismal Biology	54%
Conservation Science	16%
Plant Science	7%
6 Other Subdomains	23%

Selected Abstracts

Influence of Temporal Scale of Sampling on Detection of Relationships between Invasive Plants and the Diversity Patterns of Plants and Butterflies

CONSERVATION BIOLOGY, Issue 6 2004
RALPH MAC NALLY
But monitoring is often neglected because it can be expensive and time-consuming. Accordingly, it is valuable to determine whether the temporal extent of sampling alters the validity of inferences about the response of diversity measures to environmental variables affected by restoration actions. Non-native species alter ecosystems in undesirable ways, frequently homogenizing flora and fauna and extirpating local populations of native species. In the Mojave Desert, invasion of salt-cedar (Tamarix ramosissima Ledeb.) and human efforts to eradicate salt-cedar have altered vegetation structure, vegetation composition, and some measures of faunal diversity. We examined whether similar inferences about relationships between plants and butterflies in the Muddy River drainage (Nevada, U.S.A.) could have been obtained by sampling less intensively (fewer visits per site over the same period of time) or less extensively (equal frequency of visits but over a more limited period of time). We also tested whether rank order of butterfly species with respect to occurrence rate (proportion of sites occupied) would be reflected accurately in temporal subsamples. Temporal subsampling did not lead to erroneous inferences about the relative importance of six vegetation-based predictor variables on the species richness of butterflies. Regardless of the temporal scale of sampling, the species composition of butterflies was more similar in sites with similar species composition of plants. The rank order of occurrence of butterfly species in the temporal subsamples was highly correlated with the rank order of species occurrence in the full data set. Thus, similar inferences about associations between vegetation and butterflies and about relative occurrence rates of individual species of butterflies could be obtained by less intensive or extensive temporal sampling. If compromises between temporal intensity and extent of sampling must be made, our results suggest that maximizing temporal extent will better capture variation in biotic interactions and species occurrence. Resumen:,El monitoreo es un componente importante de los esfuerzos de restauración y de manejo adoptivo. Pero el monitoreo a menudo es desatendido porque puede ser costoso y consume tiempo. En consecuencia, es valioso determinar si la extensión temporal del muestreo altera la validez de inferencias sobre la respuesta de medidas de diversidad a variables ambientales afectadas por acciones de restauración. Las especies no nativas alteran a los ecosistemas de manera indeseable, frecuentemente homogenizan la flora y fauna y extirpan poblaciones locales de especies nativas. En el Desierto Mojave, la invasión de Tamarix ramosissima Ledeb. y los esfuerzos humanos para erradicarla han alterado la estructura y composición de la vegetación y algunas medidas de diversidad de fauna. Examinamos si se podían obtener inferencias similares sobre las relaciones entre plantas y mariposas en la cuenca Muddy River (Nevada, E.U.A.) muestreando menos intensivamente (menos visitas por sitio en el mismo período de tiempo) o menos extensivamente (igual frecuencia de visitas pero sobre un período de tiempo más limitado). También probamos si el orden jerárquico de especies de mariposas con respecto a la tasa de ocurrencia (proporción de sitios ocupados) se reflejaba con precisión en las submuestras temporales. El submuestreo temporal no condujo a inferencias erróneas acerca de la importancia relativa de seis variables predictivas basadas en vegetación sobre la riqueza de especies de mariposas. A pesar de la escala temporal del muestreo, la composición de especies de mariposas fue más similar en sitios con composición de especies de plantas similar. El orden jerárquico de ocurrencia de especies de mariposas en las muestras subtemporales estuvo muy correlacionado con el orden jerárquico de ocurrencia de especies en todo el conjunto de datos. Por lo tanto, se pudieron obtener inferencias similares de las asociaciones entre vegetación y mariposas y de las tasas de ocurrencia relativa de especies individuales de mariposas con muestreo temporal menos intensivo o extensivo. Si se deben hacer compromisos entre la intensidad y extensión de muestreo temporal, nuestros resultados sugieren que la maximización de la extensión temporal capturará la variación en interacciones bióticas y ocurrencia de especies más adecuadamente. [source]

Heterogeneity, speciation/extinction history and climate: explaining regional plant diversity patterns in the Cape Floristic Region

DIVERSITY AND DISTRIBUTIONS, Issue 3 2002
R. M. Cowling
Abstract. This paper investigates the role of heterogeneity and speciation/extinction history in explaining variation in regional scale (c. 0.1,3000 km2) plant diversity in the Cape Floristic Region of south-western Africa, a species- and endemic-rich biogeographical region. We used species-area analysis and analysis of covariance to investigate geographical (east vs. west) and topographic (lowland vs. montane) patterns of diversity. We used community diversity as a surrogate for biological heterogeneity, and the diversity of naturally rare species in quarter degree squares as an indicator of differences in speciation/extinction histories across the study region. We then used standard statistical methods to analyse geographical and topographic patterns of these two measures. There was a clear geographical diversity pattern (richer in the west), while a topographic pattern (richer in mountains) was evident only in the west. The geographical boundary coincided with a transition from the reliable winter-rainfall zone (west) to the less reliable non-seasonal rainfall zone (east). Community diversity, or biological heterogeneity, showed no significant variation in relation to geography and topography. Diversity patterns of rare species mirrored the diversity pattern for all species. We hypothesize that regional diversity patterns are the product of different speciation and extinction histories, leading to different steady-state diversities. Greater Pleistocene climatic stability in the west would have resulted in higher rates of speciation and lower rates of extinction than in the east, where for the most, Pleistocene climates would not have favoured Cape lineages. A more parsimonious hypothesis is that the more predictable seasonal rainfall of the west would have favoured non-sprouting plants and that this, in turn, resulted in higher speciation and lower extinction rates. Both hypotheses are consistent with the higher incidence of rare species in the west, and higher levels of beta and gamma diversity there, associated with the turnover of species along environmental and geographical gradients, respectively. These rare species do not contribute to community patterns; hence, biological heterogeneity is uniform across the region. The weak topography pattern of diversity in the west arises from higher speciation rates and lower extinction rates in the topographically complex mountains, rather than from the influence of environmental heterogeneity on diversity. [source]

Diversity and species composition of West African ungulate assemblages: effects of fire, climate and soil

GLOBAL ECOLOGY, Issue 6 2008
Erik Klop
ABSTRACT Aim, Anthropogenic fires are a major component of the ecology of rangelands throughout the world. To assess the effects of these fires on the diversity patterns of herbivores, we related gradients in fire occurrence, climate and soil fertility to patterns in alpha and beta diversity of African ungulates. Location, West Africa. Methods, We used a survey-based approach for ungulates in 37 protected areas in desert, savanna and rain forest habitats throughout West Africa, combined with satellite images of fire occurrence and digital maps of actual evapotranspiration and soil fertility. Alpha diversity was related to the environmental variables using conventional and spatial regression models. We investigated beta diversity using partial Mantel tests and ordination techniques, and by partitioning the variance in assemblage composition into environmental and spatial components. Results, The species richness of grazers showed a quadratic relationship with actual evapotranspiration, whereas that of browsers and frugivores showed a linear relationship. However, in the multiple regression models fire occurrence was the only variable that significantly correlated with the species richness of grazers. Soil fertility was weakly related to overall beta diversity and the species richness of browsers, but was non-significant in the multiple regression models. Fire occurrence was the most important variable explaining species composition of the overall species set and of grazers, whereas the assemblage composition of browsers and frugivores was explained mostly by actual evapotranspiration. Main conclusions, In contrast to previous studies, our analyses show that moisture and nutrients alone fail to adequately predict the diversity patterns of grazing ungulates. Rather, the species richness and assemblage composition of grazers are largely governed by anthropogenic fires that modify the quality and structure of the grass sward. Diversity patterns of browsers and frugivores are markedly different from grazers and depend mainly on the availability of moisture, which is positively correlated with the availability of foliage and fruits. Our study highlights the importance of incorporating major human-induced disturbances or habitat alterations into analyses of diversity patterns. [source]

Frontispiece: Diversity patterns of small mammals along elevational gradients

GLOBAL ECOLOGY, Issue 1 2001
Lawrence R. Heaney
No abstract is available for this article. [source]

How does grazing intensity influence the diversity of plants and insects in a species-rich upland grassland on basalt soils?

GRASS & FORAGE SCIENCE, Issue 1 2009
B. Dumont
Abstract The effect of stocking rate on the species richness, abundance and functional diversity of vascular plants, butterflies and grasshoppers was examined in a semi-natural upland pasture in central France. Over a 5-year period, 3·6-ha plots were continuously grazed by Charolais heifers at 1·4 (High stocking rate), 1·0 (Intermediate) and 0·6 (Low) livestock units (LU) ha,1. To evaluate botanical diversity, percentage cover of all plant species was estimated in late July in ten fixed 1 m × 1 m quadrats per plot. Butterflies were counted on three occasions between late June and early August along three fixed 50-m-long transects per plot using the ,Pollard walk', with grasshoppers being recorded on two occasions along the same transects. Diversity patterns of the three taxa were affected by stocking rate. For plants, species abundance changed more than species number. Abundance of forbs became higher under the Low compared with the High stocking rate. Stress-tolerant grasses were also more abundant in plots grazed at the Low stocking rate, while an opposite trend was observed for competitive grasses. Butterflies consistently responded to alterations in vegetation composition, especially to the dynamics of nectar plants. The species richness of grasshoppers also increased in plots at the Low stocking rate. The Low and Intermediate stocking rates were suitable for providing a high diversity of the three taxonomic groups. The results suggested that at least butterfly diversity would peak in vegetation taller than that of vascular plants. [source]

Diversity patterns amongst herbivorous dinosaurs and plants during the Cretaceous: implications for hypotheses of dinosaur/angiosperm co-evolution

JOURNAL OF EVOLUTIONARY BIOLOGY, Issue 3 2009
R. J. BUTLER
Abstract Palaeobiologists frequently attempt to identify examples of co-evolutionary interactions over extended geological timescales. These hypotheses are often intuitively appealing, as co-evolution is so prevalent in extant ecosystems, and are easy to formulate; however, they are much more difficult to test than their modern analogues. Among the more intriguing deep time co-evolutionary scenarios are those that relate changes in Cretaceous dinosaur faunas to the primary radiation of flowering plants. Demonstration of temporal congruence between the diversifications of co-evolving groups is necessary to establish whether co-evolution could have occurred in such cases, but is insufficient to prove whether it actually did take place. Diversity patterns do, however, provide a means for falsifying such hypotheses. We have compiled a new database of Cretaceous dinosaur and plant distributions from information in the primary literature. This is used as the basis for plotting taxonomic diversity and occurrence curves for herbivorous dinosaurs (Sauropodomorpha, Stegosauria, Ankylosauria, Ornithopoda, Ceratopsia, Pachycephalosauria and herbivorous theropods) and major groups of plants (angiosperms, Bennettitales, cycads, cycadophytes, conifers, Filicales and Ginkgoales) that co-occur in dinosaur-bearing formations. Pairwise statistical comparisons were made between various floral and faunal groups to test for any significant similarities in the shapes of their diversity curves through time. We show that, with one possible exception, diversity patterns for major groups of herbivorous dinosaurs are not positively correlated with angiosperm diversity. In other words, at the level of major clades, there is no support for any diffuse co-evolutionary relationship between herbivorous dinosaurs and flowering plants. The diversification of Late Cretaceous pachycephalosaurs (excluding the problematic taxon Stenopelix) shows a positive correlation, but this might be spuriously related to poor sampling in the Turonian,Santonian interval. Stegosauria shows a significant negative correlation with flowering plants and a significant positive correlation with the nonflowering cycadophytes (cycads, Bennettitales). This interesting pattern is worthy of further investigation, and it reflects the decline of both stegosaurs and cycadophytes during the Early Cretaceous. [source]

Heterogeneity, speciation/extinction history and climate: explaining regional plant diversity patterns in the Cape Floristic Region

Mollusk species diversity in the Southeastern Pacific: why are there more species towards the pole?

ECOGRAPHY, Issue 2 2003
Claudio Valdovinos
The most ubiquitous and well recognized diversity pattern at large spatial scales is the latitudinal increase in species richness near the equator and decline towards the poles. Although several exceptions to this pattern have been documented, shallow water mollusks, the most specious group of marine invertebrates, are the epitome of the monotonic decline in species diversity toward higher latitudes along the Pacific and Atlantic coasts of North America. Here we analyze the geographic diversity of 629 mollusk species along the Pacific South American shelf. Our analyses are based on the most complete database of invertebrates assembled for this region of the world, consisting of latitudinal ranges of over 95% of all described mollusks between 10° and 55°S. Along this coast, mollusk diversity did not follow the typical latitudinal trend. The number of species remained constant and relatively low at intermediate latitudes and sharply increased toward higher latitudes, south of 42°S. This trend was explained by changes in shelf area, but not by sea surface temperature, unlike the pattern documented for Northern Hemisphere mollusks. Direct sampling of soft bottom communities along the gradient suggests that regional trends in species richness are produced by increased alpha diversity, and not only by artifacts produced by the increase in sampling area. We hypothesize that increased shelf area south of 42°S, geographic isolation produced by divergence of major oceanic currents, and the existence of refugia during glaciations, enabled species diversification. Radiation could have been limited by narrow continental shelves between 10°,42°. Asymmetries in latitudinal diversity trends between hemispheres show that there is not a single general factor determining large-scale diversity patterns. [source]

Could the tree diversity pattern in Europe be generated by postglacial dispersal limitation?

ECOLOGY LETTERS, Issue 6 2007
Jens-Christian Svenning
Abstract The relative importance of contemporary climate and history as controls of geographical diversity patterns is intensely debated. A key example is the controversy over the extent to which temperate tree distributions and diversity patterns reflect postglacial dispersal limitation. Here, we focus on Central and Northern Europe, and show that recent estimates of tree migration rates < 100 m year,1 imply that many species have probably not reached equilibrium with climate in this region. We then demonstrate that geographical accessibility from glacial refuges explains 78% of the geographical variation in the region's tree diversity and is a much stronger diversity predictor than climate. Finally, we show that realistic estimates of migration rates can be derived from the observed tree diversity pattern by assuming it to be purely dispersal driven. In conclusion, the tree diversity pattern in Central and Northern Europe could, to a large extent, be a result of postglacial dispersal limitation. [source]

Dispersal limitation may result in the unimodal productivity-diversity relationship: a new explanation for a general pattern

JOURNAL OF ECOLOGY, Issue 1 2007
MEELIS PÄRTEL
Summary 1Variation in diversity with habitat productivity has long been a central ecological topic. Plant diversity is mostly highest at intermediate productivity, exhibiting the unimodal (so-called ,hump-back') relationship. This relationship has been explained by both evolutionary and ecological processes, but the potential role of dispersal limitation has not been considered. 2We used European flora data to show that dispersal limitation may contribute to the unimodal productivity-diversity relationship. Species were characterized by their habitat productivity preference and dispersal probability (determined by the number of seeds and the presence of a dispersal syndrome). We calculated average relative dispersal probabilities for species assemblages occurring preferentially in different habitat productivity levels. 3At low productivity levels, species without dispersal syndromes predominate (R2 = 0.89), but at high productivity levels, species with a low number of seeds are common (R2 = 0.89). The total relative dispersal probability, combining both the dispersal probabilities attributable to the number of seeds and to the presence of dispersal syndrome, had a unimodal relationship with habitat productivity (R2 = 0.86). Thus, the unimodal productivity-diversity relationship may arise due to the minimal dispersal limitation of local richness in conditions of moderately low productivity. At very low productivity, the lack of dispersal syndromes may limit dispersal. At high productivity, the low number of seeds may limit dispersal. 4Consequently, in conditions where species pool size and biotic interactions do not vary along productivity gradients, the variation in dispersal probabilities with productivity alone can produce unimodal relationships between diversity and productivity. Thus, dispersal limitation may contribute to the observed diversity pattern and ecosystem functioning to a greater extent than usually assumed. [source]

Genetic diversity pattern of Stipa purpurea populations in the hinterland of Qinghai,Tibet Plateau

ANNALS OF APPLIED BIOLOGY, Issue 1 2009
W.-S. Liu
Abstract Stipa purpurea is among constructive endemic species in alpine meadow and steppe on the Qinghai,Tibet Plateau. To reveal the genetic diversity of this species and its relationship with geographic distribution pattern, we sampled eight populations across a northward transect with an increasing aridity gradient in the hinterland of Qinghai,Tibet Plateau. Their genetic diversity was quantified using eight intersimple sequence repeat (ISSR) primers. We found that S. purpurea had relatively low genetic diversity (He = 0.135) but significant genetic differentiation among populations (Gst = 0.391), indicating relatively more genetic diversity retained within populations. A Mantel test revealed a significant relationship between genetic and geographic distance in the S. purpurea populations. The genetic diversity tended to decrease with increasing latitude and longitude, while no significant relationship was found between genetic diversity and altitude, suggesting the possible influences of humidity and temperature on genetic diversity of alpine plant. We propose conservation measures for this plant on the plateau. [source]

Heterogeneity, speciation/extinction history and climate: explaining regional plant diversity patterns in the Cape Floristic Region

Taxonomic diversity gradients through geological time

DIVERSITY AND DISTRIBUTIONS, Issue 4 2001
J. Alistair Crame
Abstract., There is evidence from the fossil record to suggest that latitudinal gradients in taxonomic diversity may be time-invariant features, although almost certainly not on the same scale as that seen at the present day. It is now apparent that both latitudinal and longitudinal gradients increased dramatically in strength through the Cenozoic era (i.e. the last 65 my) to become more pronounced today than at any time in the geological past. Present-day taxonomic diversity gradients, in both the marine and terrestrial realms, are underpinned by the tropical radiations of a comparatively small number of species-rich clades. Quite why these particular taxa proliferated through the Cenozoic is uncertain, but it could be that at least part of the explanation involves the phenomenon of evolutionary escalation. This is, in essence, a theory of biological diversification through evolutionary feedback mechanisms between predators and prey; first one develops an adaptive advantage, and then the other. However, there may also have been some form of extrinsic control on the process of tropical diversification, and this was most likely centred on the phenomenon of global climate change. This is especially so over the last 15 my Various Late Cenozoic (Neogene) vicariant events effectively partitioned the tropics into a series of high diversity centres, or foci. It has been suggested that, in the largest of these in the marine realm (the Indo-West Pacific or IWP centre), a critical patterns of islands acted as a template for rapid speciation during glacioeustatic sea level cycles. The same process occurred in the Atlantic, Caribbean and East Pacific (ACEP) centre, though on a lesser scale. Tropical terrestrial diversity may also have been promoted by rapid range expansions and contractions in concert with glacial cycles (a modified refugium hypothesis). We are beginning to appreciate that an integrated sequence of Neogene tectonic and climatic events greatly influenced the formation of contemporary taxonomic diversity patterns. [source]

Integrating highly diverse invertebrates into broad-scale analyses of cross-taxon congruence across the Palaearctic

ECOGRAPHY, Issue 6 2009
Andreas Schuldt
Our knowledge on broad-scale patterns of biodiversity, as a basis for biogeographical models and conservation planning, largely rests upon studies on the spatial distribution of vertebrates and plants, neglecting large parts of the world's biodiversity. To reassess the generality of these patterns and better understand spatial diversity distributions of invertebrates, we analyzed patterns of species richness and endemism of a hyperdiverse insect taxon, carabid beetles (ca 11 000 Palaearctic species known), and its cross-taxon congruence with well-studied vertebrates (amphibians, reptiles) and plants across 107,units of the Palaearctic. Based on species accumulation curves, we accounted for completeness of the carabid data by separately examining the western (well-sampled) and eastern (partly less well-sampled) Palaearctic and China (deficient data). For the western Palaearctic, we highlight overall centers of invertebrate, vertebrate and plant diversity. Species richness and endemism of carabids were highly correlated with patterns of especially plant and amphibian diversity across large parts of the Palaearctic. For the well-sampled western Palaearctic, hotspots of diversity integrating invertebrates were located in Italy, Spain and Greece. Only analysis of Chinese provinces yielded low congruence between carabids and plants/vertebrates. However, Chinese carabid diversity is only insufficiently known and China features the highest numbers of annual new descriptions of carabids in the Palaearctic. Even based on the incomplete data, China harbors at least 25% of all Palaearctic carabid species. Our study shows that richness and endemism patterns of highly diverse insects can exhibit high congruence with general large scale patterns of diversity inferred from plants/vertebrates and that hotspots derived from the latter can also include a high diversity of invertebrates. In this regard, China qualifies as an outstanding multi-taxon hotspot of diversity, requiring intense biodiversity research and conservation effort. Our findings extend the limited knowledge on broad-scale invertebrate distributions and allow for a better understanding of diversity patterns across a larger range of the world's biodiversity than usually considered. [source]

Elevational patterns of frog species richness and endemic richness in the Hengduan Mountains, China: geometric constraints, area and climate effects

ECOGRAPHY, Issue 6 2006
Cuizhang Fu
We studied frog biodiversity along an elevational gradient in the Hengduan Mountains, China. Endemic and non-endemic elevational diversity patterns were examined individually. Competing hypotheses were also tested for these patterns. Species richness of total frogs, endemics and non-endemics peaked at mid-elevations. The peak in endemic species richness was at higher elevations than the maxima of total species richness. Endemic species richness followed the mid-domain model predictions, and showed a nonlinear relationship with temperature. Water and energy were the most important variables in explaining elevational patterns of non-endemic species richness. A suite of interacting climatic and geometric factors best explained total species richness patterns along the elevational gradient. We suggest that the mid-domain effect was an important factor to explain elevational richness patterns, especially in regions with high endemism. [source]

The significance of geographic range size for spatial diversity patterns in Neotropical palms

ECOGRAPHY, Issue 1 2006
Holger Kreft
We examined the effect of range size in commonly applied macroecological analyses using continental distribution data for all 550 Neotropical palm species (Arecaceae) at varying grain sizes from 0.5° to 5°. First, we evaluated the relative contribution of range-restricted and widespread species on the patterns of species richness and endemism. Second, we analysed the impact of range size on the predictive value of commonly used predictor variables. Species sequences were produced arranging species according to their range size in ascending, descending, and random order. Correlations between the cumulative species richness patterns of these sequences and environmental predictors were performed in order to analyse the effect of range size. Despite the high proportion of rare species, patterns of species richness were found to be dominated by a minority of widespread species (,20%) which contained 80% of the spatial information. Climatic factors related to energy and water availability and productivity accounted for much of the spatial variation of species richness of widespread species. In contrast, species richness of range-restricted species was to a larger extent determined by topographical complexity. However, this effect was much more difficult to detect due to a dominant influence of widespread species. Although the strength of different environmental predictors changed with spatial scale, the general patterns and trends proved to be relatively stabile at the examined grain sizes. Our results highlight the difficulties to approximate causal explanations for the occurrence of a majority of species and to distinguish between contemporary climatic factors and history. [source]

Mollusk species diversity in the Southeastern Pacific: why are there more species towards the pole?

Body size determines the strength of the latitudinal diversity gradient

ECOGRAPHY, Issue 3 2001
Helmut Hillebrand
In most groups of organisms, the species richness decreases from the tropics to the poles. The mechanisms causing this latitudinal diversity gradient are still controversial. We present data from a comprehensive weighted meta-analysis on the strength of the latitudinal gradient in relation to body size. We sampled literature data on the correlation between species richness and latitude for a variety of organisms, ranging from trees to protozoa. In addition, own data on the presence of large-scale diversity patterns for diatoms were included, both for local and regional species richness. The strength of the latitudinal gradient was positively correlated to the size of the organisms. Strongest decreases of species richness to the poles was found for large organisms like trees and vertebrates, whereas meiofauna, protozoa and diatoms showed weak or no correlations between species richness and latitude. These results imply that latitudinal gradients are shaped by non-equilibrium (regional) processes and are persistent under conditions of dispersal limitation. [source]

The maximum entropy formalism and the idiosyncratic theory of biodiversity

ECOLOGY LETTERS, Issue 11 2007
Salvador Pueyo
Abstract Why does the neutral theory, which is based on unrealistic assumptions, predict diversity patterns so accurately? Answering questions like this requires a radical change in the way we tackle them. The large number of degrees of freedom of ecosystems pose a fundamental obstacle to mechanistic modelling. However, there are tools of statistical physics, such as the maximum entropy formalism (MaxEnt), that allow transcending particular models to simultaneously work with immense families of models with different rules and parameters, sharing only well-established features. We applied MaxEnt allowing species to be ecologically idiosyncratic, instead of constraining them to be equivalent as the neutral theory does. The answer we found is that neutral models are just a subset of the majority of plausible models that lead to the same patterns. Small variations in these patterns naturally lead to the main classical species abundance distributions, which are thus unified in a single framework. [source]

Could the tree diversity pattern in Europe be generated by postglacial dispersal limitation?

Subsidized Island Biogeography Hypothesis: another new twist on an old theory

ECOLOGY LETTERS, Issue 4 2001
W.B. Anderson
We present a new hypothesis for predicting and describing patterns of species diversity on small islands and habitat fragments. We have modified the traditional island biogeography equilibrium theory to incorporate the influence of spatial subsidies from the surrounding matrix, which vary among islands and habitat fragments, on species diversities. The modification indicates three possible directions for the effects of spatial subsidies on diversity, which depend on where the focal community falls on the hypothesized unimodal curve of the productivity,diversity relationship. The idea is novel because no recent syntheses of productivity,diversity,area relationships examine the role of allochthonous resources on recipient communities' diversity patterns. [source]

Eukaryotic diversity and phylogeny using small- and large-subunit ribosomal RNA genes from environmental samples

ENVIRONMENTAL MICROBIOLOGY, Issue 12 2009
William Marande
Summary The recent introduction of molecular techniques in eukaryotic microbial diversity studies, in particular those based in the amplification and sequencing of small-subunit ribosomal DNA (SSU rDNA), has revealed the existence of an unexpected variety of new phylotypes. The taxonomic ascription of the organisms bearing those sequences is generally deduced from phylogenetic analysis. Unfortunately, the SSU rDNA sequence alone has often not enough phylogenetic information to resolve the phylogeny of fast-evolving or very divergent sequences, leading to their misclassification. To address this problem, we tried to increase the phylogenetic signal by amplifying the complete eukaryotic rDNA cluster [i.e. the SSU rDNA, the internal transcribed spacers, the 5.8S rDNA and the large-subunit (LSU) rDNA] from environmental samples, and sequencing the SSU and LSU rDNA part of the clones. Using marine planktonic samples, we showed that surveys based on either SSU or SSU + LSU rDNA retrieved comparable diversity patterns. In addition, phylogenetic trees based on the concatenated SSU + LSU rDNA sequences showed better resolution, yielding good support for major eukaryotic groups such as the Opisthokonta, Rhizaria and Excavata. Finally, highly divergent SSU rDNA sequences, whose phylogenetic position was impossible to determine with the SSU rDNA data alone, could be placed correctly with the SSU + LSU rDNA approach. These results suggest that this method can be useful, in particular for the analysis of eukaryotic microbial communities rich in phylotypes of difficult phylogenetic ascription. [source]

It's all relative: ranking the diversity of aquatic bacterial communities

ENVIRONMENTAL MICROBIOLOGY, Issue 9 2008
Allison K. Shaw
Summary The study of microbial diversity patterns is hampered by the enormous diversity of microbial communities and the lack of resources to sample them exhaustively. For many questions about richness and evenness, however, one only needs to know the relative order of diversity among samples rather than total diversity. We used 16S libraries from the Global Ocean Survey to investigate the ability of 10 diversity statistics (including rarefaction, non-parametric, parametric, curve extrapolation and diversity indices) to assess the relative diversity of six aquatic bacterial communities. Overall, we found that the statistics yielded remarkably similar rankings of the samples for a given sequence similarity cut-off. This correspondence, despite the different underlying assumptions of the statistics, suggests that diversity statistics are a useful tool for ranking samples of microbial diversity. In addition, sequence similarity cut-off influenced the diversity ranking of the samples, demonstrating that diversity statistics can also be used to detect differences in phylogenetic structure among microbial communities. Finally, a subsampling analysis suggests that further sequencing from these particular clone libraries would not have substantially changed the richness rankings of the samples. [source]

Global analysis of reptile elevational diversity

GLOBAL ECOLOGY, Issue 4 2010
Christy M. McCain
ABSTRACT Aim, Latitudinal- and regional-scale studies of reptile diversity suggest a predominant temperature effect, unlike many other vertebrate richness patterns which tend to be highly correlated with both temperature and water variables. Here I examine montane gradients in reptile species richness with separate analyses of snakes and lizards from mountains around the world to assess a predominant temperature effect and three additional theories of diversity, including a temperature,water effect, the species,area effect and the mid-domain effect (MDE). Location, Twenty-five elevational gradients of reptile diversity from temperate, tropical and desert mountains in both hemispheres, spanning 10.3° N to 46.1° N. Methods, Elevational gradients in reptile diversity are based on data from the literature. Of the 63 data sets found or compiled, only those with a high, unbiased sampling effort were used in analyses. Twelve predictions and three interactions of diversity theory were tested using nonparametric statistics, linear regressions and multiple regression with the Akaike information criterion (AIC). Results, Reptile richness and, individually, snake and lizard richness on mountains followed four distinct patterns: decreasing, low-elevation plateaus, low-elevation plateaus with mid-elevation peaks, and mid-elevation peaks. Elevational reptile richness was most strongly correlated with temperature. The temperature effect was mediated by precipitation; reptile richness was more strongly tied to temperature on wet gradients than on arid gradients. Area was a secondary factor of importance, whereas the MDE was not strongly associated with reptile diversity on mountains. Main conclusions, Reptile diversity patterns on mountains did not follow the predicted temperature,water effect, as all diversity patterns were found on both wet and dry mountains. But the influence of precipitation on the temperature effect most likely reflects reptiles' use of radiant heat sources (sunning opportunities) that are more widespread on arid mountains than wet mountains due to lower humidity, sparser vegetation and less cloud cover across low and intermediate elevations. [source]

Does urbanization decrease diversity in ground beetle (Carabidae) assemblages?

GLOBAL ECOLOGY, Issue 1 2010
Tibor Magura
ABSTRACT Aim, We wanted to test whether urbanization has similar effects on biodiversity in different locations, comparing the responses of ground beetle (Coleoptera, Carabidae) assemblages with an urbanization gradient. We also wanted to see if urbanization had a homogenizing effect on ground beetle assemblages. Locations, Nine forested temperate locations in Europe, Canada and Japan. Methods, Published results of the Globenet Project were used. At all locations, three stages were identified: (1) a forested (rural) area, (2) a suburban area where the original forest was fragmented and isolated, and (3) remnants of the original forest in urban parks. These habitats formed an urbanization series. Study arrangements (number and operation of traps) and methods (pitfall trapping) were identical, conforming to the Globenet protocol. Assemblage composition and diversity patterns were evaluated. Diversity relationships were analysed by the Rényi diversity ordering method considering all ground beetles and , separately , the forest specialist species. Taxonomic homogenization was examined by multivariate methods using assemblage similarities. Results, Overall biodiversity (compared by species richness and diversity ordering) showed inconsistent trends by either urbanization intensity or by geographic position. However, when only forest species were compared, diversity was higher in the original rural (forested) areas than in urban forest fragments. Within-country similarities of carabid assemblages were always higher than within-urbanization stage similarities. Main conclusions, Urbanization does not appear to cause a decrease in ground beetle diversity per se. Forest species decline as urbanization intensifies but this trend is masked by an influx of non-forest species. The rural faunas were more similar to the urban ones within the same location than similar urbanization stages were to each other, indicating that urbanization did not homogenize the taxonomic composition of ground beetle faunas across the studied locations. [source]

Diversity and species composition of West African ungulate assemblages: effects of fire, climate and soil

Type and spatial structure of distribution data and the perceived determinants of geographical gradients in ecology: the species richness of African birds

GLOBAL ECOLOGY, Issue 5 2007
Jana M. McPherson
ABSTRACT Aim, Studies exploring the determinants of geographical gradients in the occurrence of species or their traits obtain data by: (1) overlaying species range maps; (2) mapping survey-based species counts; or (3) superimposing models of individual species' distributions. These data types have different spatial characteristics. We investigated whether these differences influence conclusions regarding postulated determinants of species richness patterns. Location, Our study examined terrestrial bird diversity patterns in 13 nations of southern and eastern Africa, spanning temperate to tropical climates. Methods, Four species richness maps were compiled based on range maps, field-derived bird atlas data, logistic and autologistic distribution models. Ordinary and spatial regression models served to examine how well each of five hypotheses predicted patterns in each map. These hypotheses propose productivity, temperature, the heat,water balance, habitat heterogeneity and climatic stability as the predominant determinants of species richness. Results, The four richness maps portrayed broadly similar geographical patterns but, due to the nature of underlying data types, exhibited marked differences in spatial autocorrelation structure. These differences in spatial structure emerged as important in determining which hypothesis appeared most capable of explaining each map's patterns. This was true even when regressions accounted for spurious effects of spatial autocorrelation. Each richness map, therefore, identified a different hypothesis as the most likely cause of broad-scale gradients in species diversity. Main conclusions, Because the ,true' spatial structure of species richness patterns remains elusive, firm conclusions regarding their underlying environmental drivers remain difficult. More broadly, our findings suggest that care should be taken to interpret putative determinants of large-scale ecological gradients in light of the type and spatial characteristics of the underlying data. Indeed, closer scrutiny of these underlying data , here the distributions of individual species , and their environmental associations may offer important insights into the ultimate causes of observed broad-scale patterns. [source]

Non-random patterns in the Yellowstone ecosystem: inferences from mammalian body size, order and biogeographical affinity

GLOBAL ECOLOGY, Issue 2 2007
Judsen E. Bruzgul
ABSTRACT Aim, Our aim was to investigate how the environment, species characteristics and historical factors at the subcontinental scale affect patterns of diversity. We used the assembly of the Yellowstone biota over the past 10,000 years as a natural experiment for investigating the processes that generate a modern non-volant mammal species pool. Location, The data represent species from throughout North America with special attention to the non-volant mammals of Yellowstone National Park, USA. Methods, We used digitized range maps to determine biogeographical affinity for all non-volant mammals in the Rocky Mountains, Deserts and Great Plains biogeographical regions of North America. This biogeographical affinity, along with taxonomic order and body size class, was used to test whether non-random patterns exist in the assemblage of Yellowstone non-volant mammals. These characteristics were also used to investigate the strength of non-random processes, such as habitat or taxon filtering, on particular groups of species or individual species. Results, Our results indicated that the Yellowstone fauna is composed of a non-random subset of mammals from specific body size classes and with particular biogeographical affinities. Analyses by taxonomic order found significantly more Carnivora from the Rocky Mountains region and significantly fewer Rodentia from the Deserts region than expected from random assembly. Analyses using body size classes revealed deviations from expectations, including several significant differences between the frequency distribution of regional body sizes and the distribution of those species found within Yellowstone. Main conclusions, Our novel approach explores processes affecting species pool assembly in the Yellowstone region and elsewhere, and particularly identifies unique properties of species that may contribute to non-random assembly. Focusing on the mechanisms generating diversity, not just current diversity patterns, will assist the design of conservation strategies given future environmental change scenarios. [source]

Elevational gradients of small mammal diversity on the northern slopes of Mt. Qilian, China

GLOBAL ECOLOGY, Issue 6 2003
Jun Sheng Li
ABSTRACT Aim, Small mammal species richness and relative abundance vary along elevational gradients, but there are different patterns that exist. This study reports the patterns of distribution and abundance of small mammals along the broader elevational gradient of Mt. Qilian range. Location, The study was conducted in the Mt. Qilian range, north-western China, from June to August 2001. Methods, Removal trapping was conducted using a standardized technique at 7 sites ranging between 1600 and 3900 m elevation within three transects. Correlation, regression and graphical analyses were used to evaluate the diversity patterns along this elevational gradient. Results, ,In total, 586 individuals representing 18 nonvolant small mammal species were collected during 20 160 trap nights. Species composition was different among the three transects with 6 (33%) of the species found only within one transect. Elevational distribution and relative abundance of small rodents showed substantial spatial variation, with only 2 species showing nonsignificant capture frequencies across elevations. Despite these variations, some general patterns of elevational distribution emerged: humped-shape relationships between species diversity and elevation were noted in all three transects with diversity peaks at middle elevations. In addition, relative abundance was negatively correlated with elevation. Conclusions, Results indicate that maximum richness and diversity of nonvolant small mammals occurred at mid-elevations where several types of plants reached their maximum diversity and primary productivity, and where rainfall and humidity reached a maximum. It is demonstrated that the mid-elevation bulge is a general feature of at least a large portion of the biota on the Mt. Qilian range. [source]

The relationships between local and regional species richness and spatial turnover

GLOBAL ECOLOGY, Issue 5 2002
Patricia Koleff
Abstract Aim To determine the empirical relationships between species richness and spatial turnover in species composition across spatial scales. These have remained little explored despite the fact that such relationships are fundamental to understanding spatial diversity patterns. Location South-east Scotland. Methods Defining local species richness simply as the total number of species at a finer resolution than regional species richness and spatial turnover as turnover in species identity between any two or more areas, we determined the empirical relationships between all three, and the influence of spatial scale upon them, using data on breeding bird distributions. We estimated spatial turnover using a measure independent of species richness gradients, a fundamental feature which has been neglected in theoretical studies. Results Local species richness and spatial turnover exhibited a negative relationship, which became stronger as larger neighbourhood sizes were considered in estimating the latter. Spatial turnover and regional species richness did not show any significant relationship, suggesting that spatial species replacement occurs independently of the size of the regional species pool. Local and regional species richness only showed the expected positive relationship when the size of the local scale was relatively large in relation to the regional scale. Conclusions Explanations for the relationships between spatial turnover and local and regional species richness can be found in the spatial patterns of species commonality, gain and loss between areas. [source]