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Detrended Correspondence Analysis (Detrend + correspondence_analysis)
Selected AbstractsModern pollen,vegetation relationships in subarctic southern Greenland and the interpretation of fossil pollen data from the Norse landnámJOURNAL OF BIOGEOGRAPHY, Issue 3 2007J. Edward Schofield Abstract Aim, The objective of this paper is to explore the relationships that exist between vegetation and modern pollen rain in the open, largely treeless landscape of subarctic Greenland. The implications of these results for the interpretation of fossil pollen assemblages from the time of the Norse landnám are then examined. Location, The study area is the sheep farming district of Qassiarsuk in the subarctic, subcontinental vegetational and climatic zone of southern Greenland (61° N, 45° W). Between c.ad 1000,1500 this region was contained within the Norse Eastern Settlement. Methods, Detrended Correspondence Analysis (DCA) of harmonized plant,pollen data sets is used to compare plant cover in 64 vegetation quadrats with pollen assemblages obtained from moss polsters at matching locations. Presence/absence data are also used to calculate indices of association, over- and under-representation for pollen types. Results, Good correspondence between paired vegetation,pollen samples occurs in many cases, particularly in locations where Salix glauca,Betula glandulosa dwarf shrub heath is dominant, and across herbaceous field boundaries and meadows. Pollen samples are found to be poor at reflecting actual ground cover where ericales or Juniperus communis are the locally dominant shrubs. Dominant or ubiquitous taxa within this landscape (Betula, Salix and Poaceae) are found to be over-represented in pollen assemblages, as are several of the ,weeds' generally accepted as introduced by the Norse settlers. Main conclusions, Due to their over-representation in the pollen rain, many of the Norse apophytes and introductions (e.g. Rumex acetosa and R. acetosella) traditionally used to infer human activity in Greenland should be particularly sensitive indicators for landnám, allowing early detection of Norse activity in fossil assemblages. Pteridophyte spores are found to be disassociated with the ground cover of ferns and clubmosses, but are over-represented in pollen assemblages, indicating extra-local or regional sources and long residence times in soil/sediment profiles for these microfossils. A pollen record for Hordeum -type registered in close proximity to a field containing barley suggests that summer temperatures under the current climatic regime are, at least on occasion, sufficient to allow flowering. [source] Influence of slope and aspect on long-term vegetation change in British chalk grasslandsJOURNAL OF ECOLOGY, Issue 2 2006JONATHAN BENNIE Summary 1,The species composition of fragmented semi-natural grasslands may change over time due to stochastic local extinction and colonization events, successional change and/or as a response to changing management or abiotic conditions. The resistance of vegetation to change may be mediated through the effects of topography (slope and aspect) on soils and microclimate. 2,To assess long-term vegetation change in British chalk grasslands, 92 plots first surveyed by F. H. Perring in 1952,53, and distributed across four climatic regions, were re-surveyed during 2001,03. Changes in vegetation since the original survey were assessed by comparing local colonization and extinction rates at the plot scale, and changes in species frequency at the subplot scale. Vegetation change was quantified using indirect ordination (Detrended Correspondence Analysis; DCA) and Ellenberg indicator values. 3,Across all four regions, there was a significant decrease in species number and a marked decline in stress-tolerant species typical of species-rich calcareous grasslands, both in terms of decreased plot occupancy and decreased frequency within occupied plots. More competitive species typical of mesotrophic grasslands had colonized plots they had not previously occupied, but had not increased significantly in frequency within occupied plots. 4,A significant increase in Ellenberg fertility values, which was highly correlated with the first DCA axis, was found across all regions. The magnitude of change of fertility and moisture values was found to decrease with angle of slope and with a topographic solar radiation index derived from slope and aspect. 5,The observed shift from calcareous grassland towards more mesotrophic grassland communities is consistent with the predicted effects of both habitat fragmentation and nutrient enrichment. It is hypothesized that chalk grassland swards on steeply sloping ground are more resistant to invasion by competitive grass species than those on flatter sites due to phosphorus limitation in shallow minerogenic rendzina soils, and that those with a southerly aspect are more resistant due to increased magnitude and frequency of drought events. [source] Spiders (Araneae) associated with downed woody material in a deciduous forest in central Alberta, CanadaAGRICULTURAL AND FOREST ENTOMOLOGY, Issue 4 2001Christopher M. Buddle Abstract 1,Spiders (Araneae) were collected on and near downed woody material (DWM) in a Populus -dominated forest to determine if spiders utilize wood surfaces, and to ascertain the importance of DWM habitat and wood elevation for spider assemblages. 2,Over 10 000 spiders representing 100 species were collected. Although more spiders were collected on the forest floor, spider diversity was higher in traps located on wood surfaces than on the forest floor, and 11 species were collected more frequently on wood surfaces. 3,Spiders utilized DWM at different stages in their development. Female Pardosa mackenziana (Keyserling) (Lycosidae) carrying egg sacs were caught most often on the surface of DWM, possibly to sun their egg sacs. Additionally, the proportion of immature spiders was higher on the wood surface than on the forest floor. 4,Spiders collected on logs with and without bark were compared to assemblages collected on telephone poles to assess what features of DWM habitat may be important. Web-building species were seldom collected on telephone poles, suggesting that they depend on the greater habitat complexity provided by DWM. In contrast, hunting spiders did not distinguish between telephone poles and logs. 5,Fewer spiders and a less diverse fauna utilized elevated compared to ground-level wood. Additionally, Detrended Correspondence Analysis revealed that the spider community from elevated wood was distinguishable from the spider community from ground-level wood, and from the forest floor spider community. [source] Palaeoenvironmental evolution and sea-level fluctuations along the southeastern Pampa grasslands coast of Argentina during the Holocene,JOURNAL OF QUATERNARY SCIENCE, Issue 3 2006Isabel Vilanova Abstract Holocene pollen and diatom analyses and complementary data from ,18O and ,13C, malacology and sedimentology have provided a detailed record of vegetation history and palaeoenvironmental change at arroyo Las Brusquitas, on the southeastern coast of the pampas of Argentina especially in relation to past sea levels. Holocene palaeosalinity trends were estimated by Detrended Correspondence Analysis and by salinity indexes based on pollen and diatom data. As a consequence of sea-level rise from the postglacial an extensive wave-cut platform formed over which Holocene infilling sequences were deposited unconformably. In these sequences, variation in pollen and diatom assemblages occurred in agreement with changes in mollusc diversity and abundance, isotope values, and sediment deposits. Between ca. 6700 and 6190 14C yr BP (6279,6998,cal. yr BP) saline conditions predominated in an environment highly influenced by tides and salt water during the Holocene sea-level highstand. Between ca. 6200 and 3900 14C yr BP (4235,4608,cal. yr BP) shallow brackish water bodies formed surrounded by saltmarsh vegetation that became more widespread from 5180 14C yr BP (5830,6173,cal. yr BP) to 3900 14C yr BP in relation to a sea-level stabilisation period within the regression phase. Less saline conditions marked by frequent variations in salinity predominated between ca. 3900 and 2040,yr 14C BP (1830,2160,cal. yr BP). The intertidal saltmarsh environment changed into a brackish marsh dominated by freshwater conditions and sporadic tidal influence. Halophytic vegetation increased towards ca. 200014C yr BP indicating that saline conditions may be due to either desiccation or an unusually high tide range with rare frequency. After ca. 2000 14C yr BP the sedimentary sequences were buried by aeolian sand dunes. Changes in Holocene vegetation and environments in Las Brusquitas area are in agreement with data obtained from various southeastern coastal sites of the Pampa grasslands. Copyright © 2005 John Wiley & Sons, Ltd. [source] Pluralism and diversity: trends in the use and application of ordination methods 1990-2007JOURNAL OF VEGETATION SCIENCE, Issue 4 2009Henrik Von Wehrden Abstract Question: What are the trends and patterns in the application of ordination techniques in vegetation science since 1990? Location: Worldwide literature analysis. Methods: Evaluation of five major journals of vegetation science; search of all ISI-listed ecological journals. Data were analysed with ANCOVAs, Spearman rank correlations, GLMs, biodiversity indices and simple graphs. Results: The ISI search retrieved fewer papers that used ordinations than the manual evaluation of five selected journals. Both retrieval methods revealed a clear trend in increasing frequency of ordination applications from 1990 to the present. Canonical Correspondence Analysis was far more frequently detected by the ISI search than any other method. Applications such as Correspondence Analysis/Reciprocal Averaging and Detrended Correspondence Analysis have increasingly been used in studies published in "applied" journals, while Canonical Correspondence Analysis, Redundancy Analysis and Non-Metric Multidimensional Scaling were more frequently used in journals focusing on more "basic" research. Overall, Detrended Correspondence Analysis was the most commonly applied method within the five major journals, although the number of publications slightly decreased over time. Use of Non-Metric Multidimensional Scaling has increased over the last 10 years. Conclusion: The availability of suitable software packages has facilitated the application of certain techniques such as Non-Metric Multidimensional Scaling. However, choices of ordination techniques are currently less driven by the constraints imposed by the software; there is also limited evidence that the choice of methods follows social considerations such as the need to use fashionable methods. Methodological diversity has been maintained or has even increased over time and reflects the researcher's need for diverse analytical tools suitable to address a wide range of questions. [source] Vegetation-environment relationships in Atlantic European calcareous grasslandsJOURNAL OF VEGETATION SCIENCE, Issue 1 2000J.C. Duckworth Hill et al. (1994); Tutin et al. (1964,1980) Abstract. The relationship between vegetation and environment was investigated for calcareous grasslands in a region in the west of Spain, France, Britain and Ireland defined by climatic criteria. Vegetation was sampled using objective methods and data collected on soils, land cover, location and management. Climate data were obtained from an available database. Examination of the first axis of vegetation variation as defined by Detrended Correspondence Analysis (DCA) showed a gradient from the Irish and British samples to those from France. The Spanish samples formed a separate group on the second axis. The species composition along the gradients is discussed. Correlations between the vegetation gradients and environmental variables were determined. The strongest correlations with the first DCA axis were for temperature, latitude, soil organic matter, grazing and land cover. The second DCA axis was highly correlated with rainfall, altitude and land cover. The third and fourth DCA axes were more difficult to interpret but appeared to be related to land cover. The results indicate that climate factors are important at this scale, but should not be considered in isolation and that factors relating to land cover and management should also be taken into account. [source] Long-term after-effects of fertilisation on the restoration of calcareous grasslandsAPPLIED VEGETATION SCIENCE, Issue 2 2008N.A.C. Smits Question: What are the long-term implications of former fertilisation for the ecological restoration of calcareous grasslands? Location: Gerendal, Limburg, The Netherlands. Methods: In 1970, ten permanent plots were established in just abandoned agricultural calcareous grassland under a regime of annual mowing in August. From 1971 to 1979, two different fertiliser treatments were applied twice a year to a subset of the plots (artificial fertiliser with different proportions of nitrogen and phosphorus). The vegetation of the plots was recorded yearly and vegetation biomass samples were taken for peak standing crop and total amounts of nitrogen, phosphorus and potassium. Species composition and floristic diversity were analysed over the research period (1970,2006) and between the treatments, including the use of multivariate techniques (Detrended Correspondence Analysis). Results: In terms of species number, there is a clear optimum 10 to 20 years after fertilisation has been terminated. Afterwards, there is a slow decrease; no new species appear and species of more nutrient-rich conditions gradually disappear. For the fertilised plots that received a relatively high proportion of N, effects are found only in the first years, whereas, for the plots that received a relatively high proportion of P, long-term after-effects are found in species composition, peak standing crop, total amounts of phosphorus in biomass, and in soil phosphorus data. Conclusions: The effect of artificial fertiliser with a large amount of nitrogen disappears in less than ten years when mown in August, including removal of the hay. This is a promising result for restoration of N-enriched calcareous grasslands, as the applied dose of nitrogen in this experiment largely exceeds the extra input of nitrogen via atmospheric deposition. Application of fertiliser with a large amount of phosphorus, however, has effects even more than 25 years after the last addition. There are no prospects that this effect will become reduced in the near future under the current mowing management. [source] Peat multi-proxy data from Männikjärve bog as indicators of late Holocene climate changes in EstoniaBOREAS, Issue 1 2007UULLE SILLASOO Sillasoo, Ü., Mauquoy, D., Blundell, A., Charman, D., Blaauw, M., Daniell, J. R. G., Toms, P., Newberry, J., Chambers, F M. & Karofeld, E. 2007 (January): Peat multi-proxy data from Männikjärve bog as indicators of late Holocene climate changes in Estonia. Boreas, Vol. 36, pp. 20,37. Oslo. ISSN 0300,9483. As part of a wider project on European climate change over the past 4500 years, a 4.5-m peat core was taken from a lawn microform on Männikjärve bog, Estonia. Several methods were used to yield proxy-climate data: (i) a quadrat and leaf-count method for plant macrofossil data, (ii) testate amoebae analysis, and (iii) colorimetric determination of peat humification. These data are provided with an exceptionally high resolution and precise chronology. Changes in bog surface wetness were inferred using Detrended Correspondence Analysis (DCA) and zonation of macrofossil data, particularly concerning the occurrence of Sphagnum balticum, and a transfer function for water-table depth for testate amoebae data. Based on the results, periods of high bog surface wetness appear to have occurred at c. 3100,3010,2990,2300, 1750,1610, 1510, 1410, 1110, 540 and 310 cal. yr BP, during four longer periods between c. 3170 and 2850 cal. yr BP, 2450 and 2000 cal. yr BP, 1770 and 1530 cal. yr BP and in the period from 880 cal. yr BP until the present. In the period between 1770 and 1530 cal. yr BP, the extension or initiation of a hollow microtope occurred, which corresponds with other research results from Mannikjarve bog. This and other changes towards increasing bog surface wetness may be the responses to colder temperatures and the predominance of a more continental climate in the region, which favoured the development of bog micro-depressions and a complex bog microtopography. Located in the border zone of oceanic and continental climatic sectors, in an area almost without land uplift, this study site may provide valuable information about changes in palaeohydrological and palaeoclimatological conditions in the northern parts of the eastern Baltic Sea region. [source] | |||||||||||||