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Connectivity Patterns (connectivity + pattern)

Distribution by Scientific Domains

Life Sciences	50%

Distribution within Life Sciences

Ecology & Organismal Biology	60%
Neuroscience	40%

Selected Abstracts

Differential impacts of habitat heterogeneity on male and female connectivity in a spatially structured pest system

AUSTRAL ECOLOGY, Issue 1 2009
G. S. HAMILTON
Abstract In a previous study, a model of landscape heterogeneity was developed and applied to a spatially structured wild rabbit (Oryctolagus cuniculus) population. That study showed clearly the influence of resource heterogeneity on connectivity levels. The simulation study was based on female movements and used population genetic validation data appropriate for a female study. Most models assume that males and females will exhibit similar patterns, although this has rarely been tested. In the current study we extend the analysis to consider differences between female and male connectivity in the same spatially structured pest system. Amplified fragment length polymorphism (AFLP) markers were screened on the same samples used previously for mtDNA analysis. The mtDNA data were used to validate female results, and AFLP data were used to validate combined male and female results. Connectivity patterns from the two simulations (female, and combined male and female) connectivity patterns showed no association. However, each was concordant with appropriate validation data, showing highly significant associations between pairwise population connectivity and the genetic data. A relative connectivity metric for the combined simulation was regressed against the mean of pairwise ,ST values, with almost 70% of the variation explained by a linear model. Demonstrating differential effects of habitat heterogeneity on male and female connectivity provides further evidence that spatial resource heterogeneity impacts on connectivity. Understanding differences in population connectivity will allow improved predictions of disease spread, local extinctions and recolonizations. Furthermore, modelling such differences in pest systems will allow management plans to be better targeted, for example by strategically introducing diseases for control purposes into populations which exhibit high male connectivity to aid spread, but low female connectivity to inhibit recolonization potential after control. [source]

Neural connectivity in hand sensorimotor brain areas: An evaluation by evoked field morphology

HUMAN BRAIN MAPPING, Issue 2 2005
Franca Tecchio
Abstract The connectivity pattern of the neural network devoted to sensory processing depends on the timing of relay recruitment from receptors to cortical areas. The aim of the present work was to uncover and quantify the way the cortical relay recruitment is reflected in the shape of the brain-evoked responses. We recorded the magnetic somatosensory evoked fields (SEF) generated in 36 volunteers by separate bilateral electrical stimulation of median nerve, thumb, and little fingers. After defining an index that quantifies the shape similarity of two SEF traces, we studied the morphologic characteristics of the recorded SEFs within the 20-ms time window that followed the impulse arrival at the primary sensory cortex. Based on our similarity criterion, the shape of the SEFs obtained stimulating the median nerve was observed to be more similar to the one obtained from the thumb (same median nerve innervation) than to the one obtained from the little finger (ulnar nerve innervation). In addition, SEF shapes associated with different brain regions were more similar within an individual than between subjects. Because the SEF morphologic characteristics turned out to be quite diverse among subjects, we defined similarity levels that allowed us to identify three main classes of SEF shapes in normalcy. We show evidence that the morphology of the evoked response describes the anatomo-functional connectivity pattern in the primary sensory areas. Our findings suggest the possible existence of a thalamo-cortico-thalamic responsiveness loop related to the different classes. Hum Brain Mapp 24:99,108, 2005. © 2004 Wiley-Liss, Inc. [source]

Connectivities in molecules by INADEQUATE: recent developments,

MAGNETIC RESONANCE IN CHEMISTRY, Issue 1 2002
J. Buddrus
Abstract The INADEQUATE (Incredible Natural Abundance DoublE QUAntum Transfer Experiment) consists of a pulse sequence which eliminates the NMR signals from isolated spins (spin system A) displaying signals from coupled spins (spin system AX or higher spin systems). It is of great importance when applied to molecules with skeleton elements such as carbon, silicon or tungsten, all of which contain a small percentage of spin-½ isotopes embedded in magnetically inactive isotopes. Analysis of the AX type spectra gives one-bond and long-range coupling constants (see compound 6) and, most important, the connectivity pattern of the skeleton atoms in molecules of unknown structure such as the carbon compounds 1 or 2, the silicon compound 3 or the lithium compound 4b. Unfortunately, INADEQUATE is rather insensitive, in the case of carbon only one out of 104 molecules gives the desired response. Efforts to reduce this drawback are described; recently, a remarkable step forward has been made by concentrating the four lines of an AX spin system to just two signals (see Fig. 2). Copyright © 2001 John Wiley & Sons, Ltd. [source]

The Large-Scale Structure of Semantic Networks: Statistical Analyses and a Model of Semantic Growth

COGNITIVE SCIENCE - A MULTIDISCIPLINARY JOURNAL, Issue 1 2005
Mark Steyvers
Abstract We present statistical analyses of the large-scale structure of 3 types of semantic networks: word associations, WordNet, and Roget's Thesaurus. We show that they have a small-world structure, characterized by sparse connectivity, short average path lengths between words, and strong local clustering. In addition, the distributions of the number of connections follow power laws that indicate a scale-free pattern of connectivity, with most nodes having relatively few connections joined together through a small number of hubs with many connections. These regularities have also been found in certain other complex natural networks, such as the World Wide Web, but they are not consistent with many conventional models of semantic organization, based on inheritance hierarchies, arbitrarily structured networks, or high-dimensional vector spaces. We propose that these structures reflect the mechanisms by which semantic networks grow. We describe a simple model for semantic growth, in which each new word or concept is connected to an existing network by differentiating the connectivity pattern of an existing node. This model generates appropriate small-world statistics and power-law connectivity distributions, and it also suggests one possible mechanistic basis for the effects of learning history variables (age of acquisition, usage frequency) on behavioral performance in semantic processing tasks. [source]

Innervation of interneurons immunoreactive for VIP by intrinsically bursting pyramidal cells and fast-spiking interneurons in infragranular layers of juvenile rat neocortex

EUROPEAN JOURNAL OF NEUROSCIENCE, Issue 1 2002
Jochen F. Staiger
Abstract Cortical columns contain specific neuronal populations with characteristic sets of connections. This wiring forms the structural basis of dynamic information processing. However, at the single-cell level little is known about specific connectivity patterns. We performed experiments in infragranular layers (V and VI) of rat somatosensory cortex, to clarify further the input patterns of inhibitory interneurons immunoreactive (ir) for vasoactive intestinal polypeptide (VIP). Neurons in acute slices were electrophysiologically characterized using whole-cell recordings and filled with biocytin. This allowed us to determine their firing pattern as regular-spiking, intrinsically bursting and fast-spiking, respectively. Biocytin was revealed histochemically and VIP immunohistochemically. Sections were examined for contacts between the axons of the filled neurons and the VIP-ir targets. Twenty pyramidal cells and five nonpyramidal (inter)neurons were recovered and sufficiently stained for further analysis. Regular-spiking pyramidal cells displayed no axonal boutons in contact with VIP-ir targets. In contrast, intrinsically bursting layer V pyramidal cells showed four putative single contacts with a proximal dendrite of VIP neurons. Fast-spiking interneurons formed contacts with two to six VIP neurons, preferentially at their somata. Single as well as multiple contacts on individual target cells were found. Electron microscopic examinations showed that light-microscopically determined contacts represent sites of synaptic interactions. Our results suggest that, within infragranular local cortical circuits, (i) fast-spiking interneurons are more likely to influence VIP cells than are pyramidal cells and (ii) pyramidal cell input probably needs to be highly convergent to fire VIP target cells. [source]

Climate change and the future for coral reef fishes

FISH AND FISHERIES, Issue 3 2008
Philip L Munday
Abstract Climate change will impact coral-reef fishes through effects on individual performance, trophic linkages, recruitment dynamics, population connectivity and other ecosystem processes. The most immediate impacts will be a loss of diversity and changes to fish community composition as a result of coral bleaching. Coral-dependent fishes suffer the most rapid population declines as coral is lost; however, many other species will exhibit long-term declines due to loss of settlement habitat and erosion of habitat structural complexity. Increased ocean temperature will affect the physiological performance and behaviour of coral reef fishes, especially during their early life history. Small temperature increases might favour larval development, but this could be counteracted by negative effects on adult reproduction. Already variable recruitment will become even more unpredictable. This will make optimal harvest strategies for coral reef fisheries more difficult to determine and populations more susceptible to overfishing. A substantial number of species could exhibit range shifts, with implications for extinction risk of small-range species near the margins of reef development. There are critical gaps in our knowledge of how climate change will affect tropical marine fishes. Predictions are often based on temperate examples, which may be inappropriate for tropical species. Improved projections of how ocean currents and primary productivity will change are needed to better predict how reef fish population dynamics and connectivity patterns will change. Finally, the potential for adaptation to climate change needs more attention. Many coral reef fishes have geographical ranges spanning a wide temperature gradient and some have short generation times. These characteristics are conducive to acclimation or local adaptation to climate change and provide hope that the more resilient species will persist if immediate action is taken to stabilize Earth's climate. [source]

Constraints on recovery: using molecular methods to study connectivity of aquatic biota in rivers and streams

FRESHWATER BIOLOGY, Issue 4 2007
JANE M. HUGHESArticle first published online: 2 MAR 200
Summary 1. The ,Field of Dreams Hypothesis' states ,if we build it, they will come', referring to the assumption that if habitats are restored, species will recolonise them. However, the ability of a species to recolonise a restored site will depend not only on the appropriate habitat being present, but also on the ability to get there. This is likely to depend on both the species' dispersal behaviour and the position of a site in the landscape. 2. Animals with good potential for dispersal are more likely to be able to disperse to newly restored sites. Similarly, sites in lowland streams with limited altitudinal differences between sites may be easier to reach than upstream sites. This is because upstream sites are connected to one another via lowland streams that have different characteristics and therefore may be difficult for animals to traverse. 3. In this paper, genetic data from a range of freshwater species that have been analysed in my laboratory are used to assess the importance of life cycle and position in the landscape (i.e. upland versus lowland streams) on connectivity patterns (and thus recolonisation potential) among populations. 4. In general, contemporary dispersal across catchment boundaries is negligible, except for aquatic insects with an adult flight stage. Dispersal among streams within catchments appears to be more limited than was predicted from knowledge on life histories, except for fish in lowland rivers and streams. 5. As predicted, dispersal of fish, crustaceans and molluscs among streams within catchments is significantly greater in lowland rivers than in upland streams. 6. Overall, these analyses suggest that, with the exception of most insects, and fishes in lowland rivers, natural recolonisation of restored sites is only likely from sites within the same stream. If a species has disappeared from the whole stream, then restoration of habitat alone may not be sufficient for its re-establishment. [source]

Inverse Modeling of Coastal Aquifers Using Tidal Response and Hydraulic Tests

GROUND WATER, Issue 6 2007
Andrés Alcolea
Remediation of contaminated aquifers demands a reliable characterization of hydraulic connectivity patterns. Hydraulic diffusivity is possibly the best indicator of connectivity. It can be derived using the tidal response method (TRM), which is based on fitting observations to a closed-form solution. Unfortunately, the conventional TRM assumes homogeneity. The objective of this study was to overcome this limitation and use tidal response to identify preferential flowpaths. Additionally, the procedure requires joint inversion with hydraulic test data. These provide further information on connectivity and are needed to resolve diffusivity into transmissivity and storage coefficient. Spatial variability is characterized using the regularized pilot points method. Actual application may be complicated by the need to filter tidal effects from the response to pumping and by the need to deal with different types of data, which we have addressed using maximum likelihood methods. Application to a contaminated artificial coastal fill leads to flowpaths that are consistent with the materials used during construction and to solute transport predictions that compare well with observations. We conclude that tidal response can be used to identify connectivity patterns. As such, it should be useful when designing measures to control sea water intrusion. [source]