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Community Dynamics (community + dynamics)
Kinds of Community Dynamics Selected AbstractsMicrobial Community Dynamics of a Continuous Mesophilic Anaerobic Biogas Digester Fed with Sugar Beet SilageENGINEERING IN LIFE SCIENCES (ELECTRONIC), Issue 4 2008B. Demirel Abstract The aim of the study was to investigate the long-term fermentation of an extremely sour substrate without any addition of manure. In the future, the limitation of manure and therefore the anaerobic digestion of silage with a very low buffering capacity will be an increasing general bottleneck for energy production from renewable biomass. During the mesophilic anaerobic digestion of sugar beet silage (without top and leaves) as the sole substrate (without any addition of manure), which had an extreme low pH of around 3.3, the highest specific gas production rate (spec. GPR) of 0.72,L/g volatile solids (VS),d was achieved at a hydraulic retention time (HRT) of 25,days compared to an organic loading rate (OLR) of 3.97,g VS/L,d at a pH of around 6.80. The methane (CH4) content of the digester ranged between 58 and 67,%, with an average of 63,%. The use of a new charge of substrate (a new harvest of the same substrate) with higher phosphate content improved the performance of the biogas digester significantly. The change of the substrate charge also seemed to affect the methanogenic population dynamics positively, thus improving the reactor performance. Using a new substrate charge, a further decrease in the HRT from 25 to 15,days did not influence the digester performance and did not seem to affect the structure of the methanogenic population significantly. However, a decrease in the HRT affected the size of the methanogenic population adversely. The lower spec. GPR of 0.54,L/g,VS,d attained on day,15 of the HRT could be attributed to a lower size of methanogenic population present in the anaerobic digester during this stage of the process. Furthermore, since sugar beet silage is a relatively poor substrate, in terms of the buffering capacity and the availability of nutrients, an external supply of buffering agents and nutrients is a prerequisite for a safe and stable digester operation. [source] NO COMMUNITY IS AN ISLAND: THE EFFECTS OF RESOURCE DEPRIVATION ON URBAN VIOLENCE IN SPATIALLY AND SOCIALLY PROXIMATE COMMUNITIES,CRIMINOLOGY, Issue 3 2006DANIEL P. MEARS The link between resource deprivation and urban violence has long been explored in criminological research. Studies, however, have largely ignored the potential for resource deprivation in particular communities to affect rates of violence in others. The relative inattention is notable because of the strong theoretical grounds to anticipate influences that extend both to geographically contiguous areas and to those that, though not contiguous, share similar social characteristics. We argue that such influences,what we term spatial and social proximity effects, respectively,constitute a central feature of community dynamics. To support this argument, we develop and test theoretically derived hypotheses about spatial and social proximity effects of resource deprivation on aggregated and disaggregated homicide counts. Our analyses indicate that local area resource deprivation contributes to violence in socially proximate communities, an effect that, in the case of instrumental homicides, is stronger when such communities are spatially proximate. We conclude by discussing the implications of our findings for theories focused on community-level social processes and violence, and for policies aimed at reducing crime in disadvantaged areas. [source] Age-related change in canopy traits shifts conspecific facilitation to interference in a semi-arid shrublandECOGRAPHY, Issue 4 2007Orna Reisman-Berman Shifts between facilitation and interference and their importance in shaping plant population and community dynamics have received wide recognition. Nevertheless, the causes and spatio-temporal scales of these shifts are poorly understood, yet strongly debated. This study tested the hypothesis that age-related changes in canopy structure shift the effect of a nurse shrub on their protégé from facilitation to interference, using as a model system the interaction between the dwarf shrub Sarcopoterium spinosum and conspecific new recruits, in the shrubland of the transition area between the Mediterranean and the semi-arid climatic zones of Israel. Foliation level (i.e. the percentage of canopy surface area covered with leaves), a measure of shrub canopy structure, increased with age. Shading level was significantly and positively related to foliation level. Densities of new recruits in the shrubland showed a unimodal response to canopy structure and cover: the highest densities were associated with canopies presenting low and medium foliation levels (providing 71 and 82% shade, respectively), while high foliation levels (93% shade) and open spaces among canopies were characterized by very low densities. A related field experiment using shading nets revealed that seedling survival rates followed a similar unimodal pattern, with the highest survival (ca 60%) detected in moderate shade (70%), twice as much as in full sun, and the lowest survival (ca 10%) observed in extreme shade (90%). These results support the study hypothesis on age-dependent interactions. Thus, in a semi-arid shrubland ecosystem, the transition of the "nurse shrub" from "young" to "old" stage can shift facilitation to interference. Hence, the age structure of established shrub populations determines a) the availability of suitable sites for seedling recruitment and b) the balance between facilitation versus interference effects on seedling establishment. [source] Distribution, abundance, and individual strategies: a multi-scale analysis of dasyurid marsupials in arid central AustraliaECOGRAPHY, Issue 3 2006Adele S. Haythornthwaite We investigated the effects of different environmental factors on the distribution and abundance of 6 species of dasyurid marsupials using a multiple-scale analysis. Data collected in the spinifex dunefields of the Simpson Desert, Australia, were analysed at 3 spatial scales spanning more than 5 orders of magnitude: "metasite" (covering an area of 1000,2000 km2), site (2,12 km2) and grid (0.01 km2). Temporal variability was also investigated, using data collected in March, April, and May in 4 consecutive years from 1997 to 2000. Both abiotic and biotic factors influenced the capture rates of different species at different times and spatial scales. At the coarsest spatial scale, Dasycercus cristicauda (mulgara) was consistently limited in its distribution by the intensity of rainfall, probably as an indirect result of increased grazing pressure from pastoral activity and a higher density of feral predators in high rainfall areas. However, at the finest spatial scale, this partly carnivorous species was scarce in areas of dense spinifex, perhaps because such habitats yield lowest returns during foraging, and was more common in areas where small invertebrate prey were abundant. Factors affecting the distribution of the most abundant dasyurid species in the study area, Sminthopsis youngsoni (lesser hairy-footed dunnart), could not be identified at any scale; we conclude that this reflects the opportunistic foraging strategies and flexible habitat requirements of this insectivorous species. Both Ningaui ridei (wongai ningaui) and Sminthopsis hirtipes (hairy-footed dunnart) were less abundant throughout the study region. For N. ridei, a spinifex specialist, predictors of occurrence could be identified only at the finest scale of analysis; at the grid level, a close positive association was detected in 2 of the 4 study years between capture rate and spinifex cover. For S. hirtipes, all 3 levels of spatial analysis revealed a negative association between capture rate and both rainfall and spinifex density. For the rarely-caught S. crassicaudata (fat-tailed dunnart) and Planigale tenuirostris (narrow-nosed planigale), no clear results were obtained at any spatial scale, and we interpret this to indicate that the study region represents sub-optimal habitat for these species. Given that different factors affected the distribution and abundance of dasyurids at different spatial scales over time, we conclude that a multiple-scale approach to population and community analysis is vital to accurately identify which environmental processes shape population and community dynamics. Understanding the interplay between regional and local processes will be crucial for management of existing species populations and for prediction of their distributions and abundances in future. [source] A general framework for neutral models of community dynamicsECOLOGY LETTERS, Issue 12 2009Omri Allouche Abstract Neutral models of community dynamics are a powerful tool for ecological research, but their applications are currently limited to unrealistically simple types of dynamics and ignore much of the complexity that characterize natural ecosystems. Here, we present a new analytical framework for neutral models that unifies existing models of neutral communities and extends the applicability of existing models to a much wider spectrum of ecological phenomena. The new framework extends the concept of neutrality to fitness equivalence and in spite of its simplicity explains a wide spectrum of empirical patterns of species diversity including positive, negative and unimodal productivity,diversity relationships; gradual and highly delayed declines in species diversity with habitat loss; and positive and negative responses of species diversity to habitat heterogeneity. Surprisingly, the abundance distribution in all of these cases is given by the dispersal limited multinomial (DLM), the abundance distribution in Hubbell's zero-sum model, showing DLM's robustness and demonstrating that it cannot be used to infer the underlying community dynamics. These results support the hypothesis that ecological communities are regulated by a limited set of fundamental mechanisms much simpler than could be expected from their immense complexity. Ecology Letters (2009) 12: 1287,1297 [source] The unseen majority: soil microbes as drivers of plant diversity and productivity in terrestrial ecosystemsECOLOGY LETTERS, Issue 3 2008Marcel G. A. Van Der Heijden Abstract Microbes are the unseen majority in soil and comprise a large portion of life's genetic diversity. Despite their abundance, the impact of soil microbes on ecosystem processes is still poorly understood. Here we explore the various roles that soil microbes play in terrestrial ecosystems with special emphasis on their contribution to plant productivity and diversity. Soil microbes are important regulators of plant productivity, especially in nutrient poor ecosystems where plant symbionts are responsible for the acquisition of limiting nutrients. Mycorrhizal fungi and nitrogen-fixing bacteria are responsible for c. 5,20% (grassland and savannah) to 80% (temperate and boreal forests) of all nitrogen, and up to 75% of phosphorus, that is acquired by plants annually. Free-living microbes also strongly regulate plant productivity, through the mineralization of, and competition for, nutrients that sustain plant productivity. Soil microbes, including microbial pathogens, are also important regulators of plant community dynamics and plant diversity, determining plant abundance and, in some cases, facilitating invasion by exotic plants. Conservative estimates suggest that c. 20 000 plant species are completely dependent on microbial symbionts for growth and survival pointing to the importance of soil microbes as regulators of plant species richness on Earth. Overall, this review shows that soil microbes must be considered as important drivers of plant diversity and productivity in terrestrial ecosystems. [source] On quantitative measures of indirect interactionsECOLOGY LETTERS, Issue 4 2007Toshinori Okuyama Abstract Indirect effects, whether density-mediated (DMII) or trait-mediated (TMII), have been recognized as potentially important drivers of community dynamics. However, empirical studies that have attempted to detect TMII or to quantify the relative strength of DMII and TMII in short-term studies have used a range of different metrics. We review these studies and assess both the consistency of a variety of different metrics and their robustness to (or ability to detect) ecological phenomena such as the dependence of forager behaviour on conspecific density. Quantifying indirect effects over longer time scales when behaviour and population density vary is more challenging, but also necessary if we really intend to incorporate indirect effects into predictions of long-term community dynamics; we discuss some problems associated with this effort and conclude with general recommendations for quantifying indirect effects. [source] Neutral community dynamics, the mid-domain effect and spatial patterns in species richnessECOLOGY LETTERS, Issue 8 2005Thiago F. L. V. B. Rangel Abstract The mid-domain effect (MDE) aims to explain spatial patterns in species richness invoking only stochasticity and geometrical constraints. In this paper, we used simulations to show that its main qualitative prediction, a hump-shaped pattern in species richness, converges to the expectation of a spatially bounded neutral model when communities are linked by short-distance migration. As these two models can be linked under specific situations, neutral theory may provide a mechanistic population level basis for MDE. This link also allows establishing in which situations MDE patterns are more likely to be found. Also, in this situation, MDE models could be used as a first approximation to understand the role of both stochastic (ecological drift and migration) and deterministic (adaptation to environmental conditions) processes driving the spatial structure of species richness. [source] Food web complexity and chaotic population dynamicsECOLOGY LETTERS, Issue 3 2002Gregor F. Fussmann Abstract In mathematical models, very simple communities consisting of three or more species frequently display chaotic dynamics which implies that long-term predictions of the population trajectories in time are impossible. Communities in the wild tend to be more complex, but evidence for chaotic dynamics from such communities is scarce. We used supercomputing power to test the hypothesis that chaotic dynamics become less frequent in model ecosystems when their complexity increases. We determined the dynamical stability of a universe of mathematical, nonlinear food web models with varying degrees of organizational complexity. We found that the frequency of unpredictable, chaotic dynamics increases with the number of trophic levels in a food web but decreases with the degree of complexity. Our results suggest that natural food webs possess architectural properties that may intrinsically lower the likelihood of chaotic community dynamics. [source] Field evidence of trait-mediated indirect interactions in a rocky intertidal food webECOLOGY LETTERS, Issue 2 2002Geoffrey C. Trussell Studies on the implications of food web interactions to community structure have often focused on density-mediated interactions between predators and their prey. This approach emphasizes the importance of predator regulation of prey density via consumption (i.e. lethal effects), which, in turn, leads to cascading effects on the prey's resources. A more recent and contrasting view emphasizes the importance of non-lethal predator effects on prey traits (e.g. behaviour, morphology), or trait-mediated interactions. On rocky intertidal shores in New England, green crab (Carcinus maenas) predation is thought to be important to patterns of algal abundance and diversity by regulating the density of herbivorous snails (Littorina littorea). We found, however, that risk cues from green crabs can dramatically suppress snail grazing, with large effects on fucoid algal communities. Our results suggest that predator-induced changes in prey behaviour may be an important and under-appreciated component of food web interactions and community dynamics on rocky intertidal shores. [source] Microbial community structure of ethanol type fermentation in bio-hydrogen productionENVIRONMENTAL MICROBIOLOGY, Issue 5 2007Nanqi Ren Summary Three continuous stirred-tank reactors (CSTRs) were used for H2 production from molasses wastewater at influent pH of 6.0,6.5 (reactor A), 5.5,6.0 (reactor B), or 4.0,4.5 (reactor C). After operation for 28 days, the microbial community formed ethanol type (C), propionate type (A) and ethanol-butyrate-mixed type (B) fermentation. The H2 production rate was the highest for ethanol type fermentation, 0.40 l (g VSS),1 day,1 or 0.45 l H2 (g COD removed),1. Microbial community dynamics and diversity were analysed using double-gradient denaturing gradient gel electrophoresis (DG-DGGE). Denaturing gradient gel electrophoresis profiles indicated that the community structures changed quickly in the first 14 days. Phylogenetic analysis indicated that the dominant bacterial groups were low G+C Gram-positive bacteria, Bacteroides, ,-Proteobacteria and Actinobacteria; ,-Proteobacteria, ,-Proteobacteria, ,-Proteobacteria and Spirochaetes were also presented as minor groups in the three reactors. H2 -producing bacteria were affiliated with Ethanoligenens, Acetanaerobacterium, Clostridium, Megasphaera, Citrobacter and Bacteroides. An ethanol-based H2 -producing bacterium, Ethanoligenens harbinense CGMCC1152, was isolated from reactor C and visualized using fluorescence in situ hybridization (FISH) to be 19% of the eubacteria in reactor C. In addition, isoenzyme activity staining for alcohol dehydrogenase (ADH) supported that the majority of ethanol-producing bacteria were affiliated with Ethanoligenens in the microbial community. [source] Microbial community dynamics in a humic lake: differential persistence of common freshwater phylotypesENVIRONMENTAL MICROBIOLOGY, Issue 6 2006Ryan J. Newton Summary In an effort to better understand the factors contributing to patterns in freshwater bacterioplankton community composition and diversity, we coupled automated ribosomal intergenic spacer analysis (ARISA) to analysis of 16S ribosomal RNA (rRNA) gene sequences to follow the persistence patterns of 46 individual phylotypes over 3 years in Crystal Bog Lake. Additionally, we sought to identify linkages between the observed phylotype variations and known chemical and biological drivers. Sequencing of 16S rRNA genes obtained from the water column indicated the presence of phylotypes associated with the Actinobacteria, Bacteroidetes, Firmicutes, Proteobacteria, TM7 and Verrucomicrobia phyla, as well as phylotypes with unknown affiliation. Employment of the 16S rRNA gene/ARISA method revealed that specific phylotypes varied independently of the entire bacterial community dynamics. Actinobacteria, which were present on greater than 95% of sampling dates, did not share the large temporal variability of the other identified phyla. Examination of phylotype relative abundance patterns (inferred using ARISA fragment relative fluorescence) revealed a strong correlation between the dominant phytoplankton succession and the relative abundance patterns of the majority of individual phylotypes. Further analysis revealed covariation among unique phylotypes, which formed several distinct bacterial assemblages correlated with particular phytoplankton communities. These data indicate the existence of unique persistence patterns for different common freshwater phylotypes, which may be linked to the presence of dominant phytoplankton species. [source] Summer drought decreases soil fungal diversity and associated phenol oxidase activity in upland Calluna heathland soilFEMS MICROBIOLOGY ECOLOGY, Issue 2 2008Hannah Toberman Abstract Natural moisture limitation during summer drought can constitute a stress for microbial communities in soil. Given globally predicted increases in drought frequency, there is an urgent need for a greater understanding of the effects of drought events on soil microbial processes. Using a long-term field-scale drought manipulation experiment at Clocaenog, Wales, UK, we analysed fungal community dynamics, using internal transcribed spacer-denaturing gradient gel electrophoresis (DGGE), over a 1-year period in the 6th year of drought manipulation. Ambient seasonality was found to be the dominant factor driving variation in fungal community dynamics. The summer drought manipulation resulted in a significant decline in the abundance of dominant fungal species, both independently of, and in interaction with, this seasonal variation. Furthermore, soil moisture was significantly correlated with the changes in fungal diversity over the drought manipulation period. While the relationship between species diversity and functional diversity remains equivocal, phenol oxidase activity was decreased by the summer drought conditions and there was a significant correlation with the decline of DGGE band richness among the most dominant fungal species during the drought season. Climatically driven events such as droughts may have significant implications for fungal community diversity and therefore, have the potential to interfere with crucial ecosystem processes, such as organic matter decomposition. [source] Microbial community dynamics in nutrient-pulsed chemostatsFEMS MICROBIOLOGY ECOLOGY, Issue 1 2006Militza Carrero-Colón Abstract In nature, microbes are subject to nutrient fluxes. As the periodicity of nutrient flux lengthens, different physiological traits may be selected. The competitive exclusion principle stipulates that one organism will dominate these systems; however, interspecies interactions may produce a dynamic microbial community. These issues were investigated in chemostats pulsed with gelatin. Chemostats were run over 30 days with substrate addition continuously or at intervals of 0.5, 1 or 3 days. Growth rates were similar between pulse intervals. Ectoaminopeptidase activity levels remained relatively constant within a pulse interval. Bacterial community structure was monitored using denaturing gradient gel electrophoresis of PCR products of the 16S rRNA gene. There were dynamic changes at all periodicities; however, the pace of these changes decreased over time. Final communities were not identical between different treatments. The structure of persistent vs. active microbial populations was compared by denaturing gradient gel electrophoresis of the PCR and reverse transcriptase-PCR amplicons of 16S rDNA and rRNA templates, respectively. For all the chemostats, the rRNA profiles were not identical to the rDNA profiles for a sample. These experiments demonstrate that complex community dynamics can occur under environmental heterogeneities that are modest relative to those found in natural aquatic habitats. Furthermore, the physiological functionality of these dynamic communities was stable. [source] Fire, flow and dynamic equilibrium in stream macroinvertebrate communitiesFRESHWATER BIOLOGY, Issue 2 2010ROBERT S. ARKLE Summary 1. The complex effects of disturbances on ecological communities can be further complicated by subsequent perturbations within an ecosystem. We investigated how wildfire interacts with annual variations in peak streamflow to affect the stability of stream macroinvertebrate communities in a central Idaho wilderness, USA. We conducted a 4-year retrospective analysis of unburned (n = 7) and burned (n = 6) catchments, using changes in reflectance values (,NBR) from satellite imagery to quantify the percentage of each catchment's riparian and upland vegetation that burned at high and low severity. 2. For this wildland fire complex, increasing riparian burn severity and extent were associated with greater year-to-year variation, rather than a perennial increase, in sediment loads, organic debris, large woody debris (LWD) and undercut bank structure. Temporal changes in these variables were correlated with yearly peak flow in burned catchments but not in unburned reference catchments, indicating that an interaction between fire and flow can result in decreased habitat stability in burned catchments. 3. Streams in more severely burned catchments exhibited increasingly dynamic macroinvertebrate communities and did not show increased similarity to reference streams over time. Annual variability in macroinvertebrates was attributed, predominantly, to the changing influence of sediment, LWD, riparian cover and organic debris, as quantities of these habitat components fluctuated annually depending on burn severity and annual peak streamflows. 4. These analyses suggest that interactions among fire, flow and stream habitat may increase inter-annual habitat variability and macroinvertebrate community dynamics for a duration approaching the length of the historic fire return interval of the study area. [source] Towards a predictive understanding of belowground process responses to climate change: have we moved any closer?FUNCTIONAL ECOLOGY, Issue 6 2008Elise Pendall Summary 1Belowground processes, including root production and exudation, microbial activity and community dynamics, and biogeochemical cycling interact to help regulate climate change. Feedbacks associated with these processes, such as warming-enhanced decomposition rates, give rise to major uncertainties in predictions of future climate. 2Uncertainties associated with these processes are more likely to be reduced if two key challenges can be met: increasing interdisciplinarity among researchers, and measuring belowground ecosystem structure and function at relevant spatial and temporal scales. For instance, recognizing the relationship between belowground primary production and soil respiration enhances modelling of global-scale C cycle temperature responses. At the opposite end of the spectrum, applying genomic techniques at the scale of microns improves mechanistic understanding of root,microbe interactions. 3Progress has been made in understanding interactions of belowground processes with climate change, although challenges remain. We highlight some of these advances and provide directions for key research needs in this Special Feature of Functional Ecology, which results from a symposium that was convened at the Soil Science Society of America National Meeting in November, 2006. [source] Evolution on ecological time-scalesFUNCTIONAL ECOLOGY, Issue 3 2007S. P. CARROLL Summary 1Ecologically significant evolutionary change, occurring over tens of generations or fewer, is now widely documented in nature. These findings counter the long-standing assumption that ecological and evolutionary processes occur on different time-scales, and thus that the study of ecological processes can safely assume evolutionary stasis. Recognition that substantial evolution occurs on ecological time-scales dissolves this dichotomy and provides new opportunities for integrative approaches to pressing questions in many fields of biology. 2The goals of this special feature are twofold: to consider the factors that influence evolution on ecological time-scales , phenotypic plasticity, maternal effects, sexual selection, and gene flow , and to assess the consequences of such evolution , for population persistence, speciation, community dynamics, and ecosystem function. 3The role of evolution in ecological processes is expected to be largest for traits that change most quickly and for traits that most strongly influence ecological interactions. Understanding this fine-scale interplay of ecological and evolutionary factors will require a new class of eco-evolutionary dynamic modelling. 4Contemporary evolution occurs in a wide diversity of ecological contexts, but appears to be especially common in response to anthropogenic changes in selection and population structure. Evolutionary biology may thus offer substantial insight to many conservation issues arising from global change. 5Recent studies suggest that fluctuating selection and associated periods of contemporary evolution are the norm rather than exception throughout the history of life on earth. The consequences of contemporary evolution for population dynamics and ecological interactions are likely ubiquitous in time and space. [source] Exploitation and habitat degradation as agents of change within coral reef fish communitiesGLOBAL CHANGE BIOLOGY, Issue 12 2008S. K. WILSON Abstract Over-exploitation and habitat degradation are the two major drivers of global environmental change and are responsible for local extinctions and declining ecosystem services. Here we compare the top-down effect of exploitation by fishing with the bottom-up influence of habitat loss on fish communities in the most diverse of ecological systems, coral reefs. Using a combination of multivariate techniques and path analyses, we illustrate that the relative importance of coral cover and fishing in controlling fish abundance on remote Fijian reefs varies between species and functional groups. A decline in branching Acropora coral is strongly associated with a decline in abundance of coral-feeding species, and a decrease in coral-associated habitat complexity, which has indirectly contributed to reduced abundance of small-bodied damselfish. In contrast, reduced fishing pressure, brought about by declining human populations and a shift to alternate livelihoods, is associated with increased abundance of some piscivores and fisheries target species. However, availability of prey is controlled by coral-associated habitat complexity and appears to be a more important driver of total piscivore abundance compared with fishing pressure. Effects of both fishing and coral loss are stronger on individual species than functional groups, as variation in the relative importance of fishing or coral loss among species within the same functional group attenuated the impact of either of these potential drivers at the functional level. Overall, fishing continues to have an influence on Fijian fish communities; however, habitat loss is currently the overriding agent of change. The importance of coral loss mediated by climate change is expected to have an increasing contribution to fish community dynamics, particularly in remote locations or where the influence of fishing is waning. [source] Non-lethal effects of predation in birdsIBIS, Issue 1 2008WILL CRESSWELL Predators can affect individual fitness and population and community processes through lethal effects (direct consumption or ,density' effects), where prey is consumed, or through non-lethal effects (trait-mediated effects or interactions), where behavioural compensation to predation risk occurs, such as animals avoiding areas of high predation risk. Studies of invertebrates, fish and amphibians have shown that non-lethal effects may be larger than lethal effects in determining the behaviour, condition, density and distribution of animals over a range of trophic levels. Although non-lethal effects have been well described in the behavioural ecology of birds (and also mammals) within the context of anti-predation behaviour, their role relative to lethal effects is probably underestimated. Birds show many behavioural and physiological changes to reduce direct mortality from predation and these are likely to have negative effects on other aspects of their fitness and population dynamics, as well as affecting the ecology of their own prey and their predators. As a consequence, the effects of predation in birds are best measured by trade-offs between maximizing instantaneous survival in the presence of predators and acquiring or maintaining resources for long-term survival or reproduction. Because avoiding predation imposes foraging costs, and foraging behaviour is relatively easy to measure in birds, the foraging,predation risk trade-off is probably an effective framework for understanding the importance of non-lethal effects, and so the population and community effects of predation risk in birds and other animals. Using a trade-off approach allows us to predict better how changes in predator density will impact on population and community dynamics, and how animals perceive and respond to predation risk, when non-lethal effects decouple the relationship between predator density and direct mortality rate. The trade-off approach also allows us to identify where predation risk is structuring communities because of avoidance of predators, even when this results in no observable direct mortality rate. [source] Dendritic network structure constrains metacommunity properties in riverine ecosystemsJOURNAL OF ANIMAL ECOLOGY, Issue 3 2010B. L. Brown Summary 1.,Increasingly, ecologists conceptualize local communities as connected to a regional species pool rather than as isolated entities. By this paradigm, community structure is determined through the relative strengths of dispersal-driven regional effects and local environmental factors. However, despite explicit incorporation of dispersal, metacommunity models and frameworks often fail to capture the realities of natural systems by not accounting for the configuration of space within which organisms disperse. This shortcoming may be of particular consequence in riverine networks which consist of linearly -arranged, hierarchical, branching habitat elements. Our goal was to understand how constraints of network connectivity in riverine systems change the relative importance of local vs. regional factors in structuring communities. 2.,We hypothesized that communities in more isolated headwaters of riverine networks would be structured by local forces, while mainstem sections would be structured by both local and regional processes. We examined these hypotheses using a spatially explicit regional analysis of riverine macroinvertebrate communities, focusing on change in community similarity with distance between local communities [i.e., distance-decay relationships; (DDRs)], and the change in environmental similarity with distance. Strong DDRs frequently indicate dispersal-driven dynamics. 3.,There was no evidence of a DDR in headwater communities, supporting our hypothesis that dispersal is a weak structuring force. Furthermore, a positive relationship between community similarity and environmental similarity supported dynamics driven by local environmental factors (i.e., species sorting). In mainstem habitats, significant DDRs and community × environment similarity relationships suggested both dispersal-driven and environmental constraints on local community structure (i.e., mass effects). 4.,We used species traits to compare communities characterized by low vs. high dispersal taxa. In headwaters, neither strength nor mode (in-network vs. out of network) of dispersal changed our results. However, outcomes in mainstems changed substantially with both dispersal mode and strength, further supporting the hypothesis that regional forces drive community dynamics in mainstems. 5.,Our findings demonstrate that the balance of local and regional effects changes depending on location within riverine network with local (environmental) factors dictating community structure in headwaters, and regional (dispersal driven) forces dominating in mainstems. [source] Reciprocal phenotypic plasticity can lead to stable predator,prey interactionJOURNAL OF ANIMAL ECOLOGY, Issue 6 2009Akihiko Mougi Summary 1.,Inducible defences of prey and inducible offences of predators are prevalent strategies in trophic interactions with temporal variation. Due to the inducible properties of the functional traits themselves, which drive the dynamic predator,prey relationship on an ecological time-scale, predator and prey may reciprocally interact through their inducible traits (i.e. reciprocal phenotypic plasticity). 2.,Although overwhelming evidence of the stabilizing effect of inducible traits in either species on community dynamics forcefully suggests a critical ecological role for reciprocal plasticity in predator,prey population dynamics, our understanding of its ecological consequences is very limited. 3.,Within a mathematical modelling framework, we investigated how reciprocal plasticity influences the stability of predator,prey systems. 4.,By assuming two types of phenotypic shift, a density-dependent shift and an adaptive phenotypic shift, we examined two interaction scenarios with reciprocal plasticity: (i) an arms-race-like relationship, in which the defensive prey phenotype is more protective against both predator phenotypes (i.e. normal and offensive) than the normal prey phenotype, and the offensive predator is a more efficient consumer, preying upon both prey phenotypes (i.e. normal and defensive), than the normal predator and (ii) a matching response-like relationship, in which the offensive predator consumes more defensive prey and fewer normal prey than the normal predator. 5.,Results of both phenotypic shift models consistently suggest that given the used set of parameter values, the arms-race-like reciprocal plasticity scenario has the largest stability area, when compared with the other scenarios. In particular, higher stability is achieved when the prey exhibits a high-performance inducible defence. Furthermore, this stabilization is so strong that the destabilizing effects of enrichment may be eliminated, even though the higher flexibility of plasticity does not always stabilize a system. 6.,Recent empirical studies support our model predictions. Clear-cut examples of reciprocal phenotypic plasticity show an arms-race-like relationship in which prey species exhibit induced high-performance defences. We may need to re-examine reported predator,prey interactions in which predator or prey exhibits inducible plasticity to determine whether arms-race-like reciprocal plasticity is a general ecological phenomenon. [source] State-dependent risk-taking by green sea turtles mediates top-down effects of tiger shark intimidation in a marine ecosystemJOURNAL OF ANIMAL ECOLOGY, Issue 5 2007MICHAEL R. HEITHAUS Summary 1A predictive framework of community and ecosystem dynamics that applies across systems has remained elusive, in part because non-consumptive predator effects are often ignored. Further, it is unclear how much individual-level detail community models must include. 2Previous studies of short-lived species suggest that state-dependent decisions add little to our understanding of community dynamics. Body condition-dependent decisions made by long-lived herbivores under risk of predation, however, might have greater community-level effects. This possibility remains largely unexplored, especially in marine environments. 3In the relatively pristine seagrass community of Shark Bay, Australia, we found that herbivorous green sea turtles (Chelonia mydas Linnaeus, 1758) threatened by tiger sharks (Galeocerdo cuvier Peron and LeSueur, 1822) select microhabitats in a condition-dependent manner. Turtles in poor body condition selected profitable, high-risk microhabitats, while turtles in good body condition, which are more abundant, selected safer, less profitable microhabitats. When predation risk was low, however, turtles in good condition moved into more profitable microhabitats. 4Condition-dependent use of space by turtles shows that tiger sharks modify the spatio-temporal pattern of turtle grazing and their impacts on ecosystem dynamics (a trait-mediated indirect interaction). Therefore, state-dependent decisions by individuals can have important implications for community dynamics in some situations. 5Our study suggests that declines in large-bodied sharks may affect ecosystems more substantially than assumed when non-lethal effects of these top predators on mesoconsumers are not considered explicitly. [source] The interaction of disturbances and small mammal community dynamics in a lowland forest in BelizeJOURNAL OF ANIMAL ECOLOGY, Issue 6 2006R. KLINGER Summary 1Three floods (July 2000, August 2002, September 2003) and a hurricane (October 2001) that occurred in a lowland forest in the southern Maya Mountains of Belize presented an opportunity to evaluate the influence of these disturbances on the structure of a small mammal assemblage. 2Four terrestrial and four primarily scansorial/arboreal species were trapped July 2000,March 2005 in six grids over 14 irregularly spaced trapping periods. 3Community dynamics were characterized more by changes in species composition than changes in diversity. The dynamics were driven by species-specific variation in abundance, with changes in composition generally, but not exclusively, due to the occurrence or disappearance of species at low abundance. Despite the disturbances, species richness remained relatively constant. Evenness within the assemblage was consistently low, primarily as a result of dominance by one species, Heteromys desmarestianus. 4Effects of flooding on community structure were direct but relatively brief (< 1 year), and varied with the duration and intensity of flooding. Effects from the hurricane were indirect but long-lasting and strongly related to severely reduced food resources. 5This study suggests that long-term dynamics in the structure of many animal communities in the tropics often results from interactions between direct and indirect effects of disturbance. It also suggests that community resistance will depend on variation in disturbance type and regime, but resilience will be determined by the life-history characteristics of each species. [source] Predicting the effects of perturbations on ecological communities: what can qualitative models offer?JOURNAL OF ANIMAL ECOLOGY, Issue 5 2005DAVE RAMSEY Summary 1Quantitative predictions of the effects of perturbations on communities of interacting species have often proved to be difficult. However, if precise predictions are not a requirement then qualitative models of community dynamics offer an alternative method for predicting species responses to perturbations. 2We used two qualitative modelling approaches to predict the effects of predator control on the fledging rate of an endangered New Zealand bird, the North Island kokako. The first approach was based on loop analysis and provided predictions on the probable direction of change in species abundances to single species perturbations. The second approach, ,fuzzy interaction webs', used fuzzy logic in the framework of a fuzzy cognitive map to provide predictions on the probable magnitude of change in species abundances to perturbations. 3Using both methods, we predicted the qualitative change in the equilibrium fledging rates of kokako under various regimes of single- and multispecies predator control (ship rats, brushtail possums and stoats). Single species control was insufficient to lift the fledging rate from ,low' to ,moderate'. However, simultaneous control of both ship rats and possums had the greatest influence on the fledging rates compared with any other combination as a result of the additional indirect effect of ship rat control on stoat abundance. 4We propose qualitative modelling of community dynamics as a method suitable for predicting the effects of perturbations in complex ecological communities that can encapsulate diverse sources of knowledge about food web interactions. We believe that these methods are a useful set of heuristic tools that can be used to propose testable hypotheses about ecosystem functioning that can complement existing statistical and quantitative modelling approaches. [source] Assessment of anaerobic wastewater treatment failure using terminal restriction fragment length polymorphism analysisJOURNAL OF APPLIED MICROBIOLOGY, Issue 6 2005C. Scully Abstract Aims:, The suitability of genetic fingerprinting to study the microbiological basis of anaerobic bioreactor failure is investigated. Methods and Results:, Two laboratory-scale anaerobic expanded granular sludge bed bioreactors, R1 and R2, were used for the mesophilic (37°C) treatment of high-strength [10 g chemical oxygen demand (COD) l,1] synthetic industrial-like wastewater over a 100-day trial period. A successful start up was achieved by both bioreactors with COD removal over 90%. Both reactors were operated under identical parameters; however, increased organic loading during the trial induced a reduction in the COD removal of R1, while R2 maintained satisfactory performance (COD removal >90%) throughout the experiment. Specific methanogenic activity measurements of biomass from both reactors indicated that the main route of methane production was hydrogenotrophic methanogenesis. Terminal restriction fragment length polymorphism (TRFLP) analysis was applied to the characterization of microbial community dynamics within the system during the trial. The principal differences between the two consortia analysed included an increased abundance of Thiovulum - and Methanococcus -like organisms and uncultured Crenarchaeota in R1. Conclusions:, The results indicated that there was a microbiological basis for the deviation, in terms of operational performance, of R1 and R2. Significance and Impact of the Study:, High-throughput fingerprinting techniques, such as TRFLP, have been demonstrated as practically relevant for biomonitoring of anaerobic reactor communities. [source] Migration strategies of sylviid warblers: chance patterns or community dynamics?JOURNAL OF AVIAN BIOLOGY, Issue 1 2000Peter Howlett The effects of community dynamics in birds on the optimisation of their migratory strategies is a neglected area. For three years, we captured migrating warblers on autumn passage at a coastal site in western Britain. We used canonical correspondence analysis (CCA) to assess spatio-temporal patterns of occurrence, and principal components analysis (PCA) to assess morphological variation. We calculated Euclidean distance in ordination and morphological space to assess separation between species pairs, and used Monte-Carlo simulations to assess the probability of pattern occurring by chance. Ordination revealed five species-groups separated by habitat type and time of passage. Reed Warbler Acrocephalus scirpaceus and Sedge Warbler A. schoenobaenus (Group 1) occurred in wet habitats and peaked simultaneously. In drier habitats with scrub, a first wave of Blackcap Sylvia atricapilla (Group 2) significantly preceded Grasshopper Warbler Locustella naevia, Willow Warbler Phylloscopus trochilus, Whitethroat Sylvia communis and Lesser Whitethroat Sylvia curruca (Group 3), which in all but one case (Lesser Whitethroat) significantly preceded Garden Warbler Sylvia borin (Group 4); peak numbers of Chiffchaffs Phylloscopus collybita and a second wave of Blackcaps (Group 5) occurred later still. Age effects were found only in Acrocephalus, with adults peaking before juveniles. For seven out of eight pairings within genera, separation in time of passage increased significantly in species that were morphologically similar. The only exception was Blackcap and Lesser Whitethroat which differed substantially in both passage time and morphology. Monte-Carlo simulations showed that chance was unlikely to be responsible for ordination patterns, nor for inter-specific variation in passage time and its relationship with species morphology. These data provide annually consistent evidence that migrating sylviid warblers are separated ecologically by habitat use, time of passage and morphology: we cannot refute the hypothesis that community dynamics have influenced niche use and autumn migratory strategy. We call for further tests of the ,migrant interaction' hypothesis in other geographical locations and taxa, particularly where migrants are allopatric and interact ecologically only on migration. [source] The matrix model for clinical psychology: A contextual approachJOURNAL OF CLINICAL PSYCHOLOGY, Issue 9 2005Stanley Sue The four level matrix model proposed by C.R. Snyder and T.R. Elliott (this issue) is a bold attempt to provide a coherent philosophy and model to guide the training of clinical psychologists. Shortcomings of current training practices, such as a focus on individuals rather than community dynamics and on pathology rather than strengths, are addressed in the proposed model. Difficulties in the implementation of the model are discussed. © 2005 Wiley Periodicals, Inc. J Clin Psychol. [source] Drivers of lowland rain forest community assembly, species diversity and forest structure on islands in the tropical South PacificJOURNAL OF ECOLOGY, Issue 1 2010Gunnar Keppel Summary 1.,Testing the comparative strength and influence of age and area of islands, proximity of source propagules and disturbances on community assembly, species diversity and vegetation structure has proved difficult at large scales. The little-studied rain forests in the Tropical South Pacific (TSP) provide a unique study area to investigate determinants of community dynamics, with islands varying in age, isolation, area and cyclone frequency. We tested the effects of biogeographical factors and cyclone frequency on the species composition, species diversity and forest structure of old-growth rain forest using 1-ha inventory plots on 12 islands between New Guinea and the Solomon Islands. 2.,As predicted by the General Dynamic Model of Oceanic Island Biogeography, the biogeographical variables of archipelago age and island area are the most important factors affecting species richness and diversity, with older and larger islands having higher richness and diversity. There is no significant effect of cyclone frequency on species diversity. 3.,The theory that diversity drives endemism is not supported in this system as endemism is not correlated with species diversity. Instead, age and isolation of an island best explain patterns of endemism, with the latter suggesting dispersal limitations between archipelagos. 4.,Proximity to source area influences species composition of lowland tropical rain forests in the TSP, which is also supported by a strong correlation between geographic distance and floristic similarity. Vector-fitting onto non-metric multidimensional scaling suggests that archipelago age and cyclone frequency may, in addition to proximity to source area, influence species composition. This implies that a species' tolerance to cyclones affects its abundance at different cyclone frequencies. 5.,Synthesis. Both biogeographical variables (island area and isolation) and cyclone frequency appear to affect community assembly in lowland rain forests in the TSP. While species are hence not ecologically equivalent, interspecific ecological differences do not seem to affect the overall patterns of species diversity, which are mostly determined by biogeographical variables, as predicted by the neutral theory. [source] Plant invasions and the nicheJOURNAL OF ECOLOGY, Issue 4 2009Andrew S. MacDougall Summary 1For plant invaders, being different is often equated with being successful, yet the mechanistic connection remains unclear. 2Classic niche theory predicts that invaders with niches distinct from the native flora should coexist with little interaction with native species, yet such invaders often have substantial impacts. Meanwhile, invaders that overlap in niche space with native species should either be repelled or dominate, yet these invaders often naturalize with little effect. Such discrepancies between theory and observation raise questions about how species differences influence invader establishment and impact. 3Here, we review these issues in light of recent work on coexistence theory, which shows how niche and fitness differences between natives and invaders interact to determine invasion outcomes. We show how successful invader establishment depends on either a fitness advantage or niche difference from resident species, but that only the former allows invaders to become dominant. 4By identifying the role of niche and fitness differences in leading invasion hypotheses, we unify their predictions for invasion success while highlighting new approaches for evaluating the importance of species differences for invasion. 5Synthesis. Situating the invasion process within a recent coexistence framework broadens our understanding of invasion mechanisms and more tightly links problems in invasion ecology with our more general understanding of community dynamics. [source] Invasion impacts diversity through altered community dynamicsJOURNAL OF ECOLOGY, Issue 6 2005KATHRYN A. YURKONIS Summary 1Invading plant species often alter community structure, composition and, in some instances, reduce local diversity. However, the community dynamics underlying these impacts are relatively unknown. 2Declines in species richness with invasion may occur via displacement of resident species and/or reduction of seedling establishment by the invader. These two mechanisms differ in the demographic stage of the interaction. 3We document turnover dynamics using long-term permanent plot data to assess the mechanism(s) of invasion impacts of four exotic species on a mixed community of native and exotic species. These mechanisms were evaluated at both the neighbourhood (1-m2 plot) and population (individual species) scales. 4During invasion, species richness declined with increasing invader cover for three of the four invaders. All invaders reduced colonization rates, but had no effect on extinction rates at the neighbourhood scale. Populations differed in their susceptibility to invasion impacts, with significant reductions in colonization for 10 of 25 (40%) species and increases in extinction for only 4 of 29 (14%) species. 5At neighbourhood and population scales, influences of invasion on community dynamics were essentially the same for all invaders regardless of life-form. While individual resident species had some increase in extinction probability, community richness impacts were largely driven by colonization limitation. 6The consistency of invasion impacts across life-forms suggests establishment limitation as a general mechanism of invasion impact. This common causal mechanism should be explored in other systems to determine the extent of its generality. [source] | ||||||||||||||||||||||||||||||||||