Chemical Shift Imaging (chemical + shift_imaging)

Distribution by Scientific Domains


Selected Abstracts


Implementation of three-dimensional wavelet encoding spectroscopic imaging: In vivo application and method comparison

MAGNETIC RESONANCE IN MEDICINE, Issue 1 2009
Richard Young
Abstract We have recently proposed a two-dimensional Wavelet Encoding-Spectroscopic Imaging (WE-SI) technique as an alternative to Chemical Shift Imaging (CSI), to reduce acquisition time and crossvoxel contamination in magnetic resonance spectroscopic imaging (MRSI). In this article we describe the extension of the WE-SI technique to three dimensions and its implementation on a clinical 1.5 T General Electric (GE) scanner. Phantom and in vivo studies are carried out to demonstrate the usefulness of this technique for further acquisition time reduction with low voxel contamination. In wavelet encoding, a set of dilated and translated prototype functions called wavelets are used to span a localized space by dividing it into a set of subspaces with predetermined sizes and locations. In spectroscopic imaging, this process is achieved using radiofrequency (RF) pulses with profiles resembling the wavelet shapes. Slice selective excitation and refocusing RF pulses, with single-band and dual-band profiles similar to Haar wavelets, are used in a modified PRESS sequence to acquire 3D WE-SI data. Wavelet dilation and translation are achieved by changing the strength of the localization gradients and frequency shift of the RF pulses, respectively. The desired spatial resolution in each direction sets the corresponding number of dilations (increases in the localization gradients), and consequently, the number of translations (frequency shift) of the Haar wavelets (RF pulses), which are used to collect magnetic resonance (MR) signals from the corresponding subspaces. Data acquisition time is reduced by using the minimum recovery time (TRmin), also called effective time, when successive MR signals from adjacent subspaces are collected. Inverse wavelet transform is performed on the acquired data to produce metabolite maps. The proposed WE-SI method is compared in terms of acquisition time, pixel bleed, and signal-to-noise ratio to the CSI technique. The study outcome shows that 3D WE-SI provides accurate results while reducing both acquisition time and voxel contamination. Magn Reson Med 61:6,15, 2009. © 2008 Wiley-Liss, Inc. [source]


Observation of the Structure, Moisture Distribution, and Oil Distribution in the Coating of Tempura by NMR Micro Imaging

JOURNAL OF FOOD SCIENCE, Issue 6 2003
A.K. Horigane
ABSTRACT: The 3-layered fine structure of the coating of the Japanese oil-fried battered food, tempura, was observed by nuclear magnetic resonance micro imaging. The porosity of the intermediate layer was correlated to the moisture content of the batter. Chemical shift imaging, which gave moisture distribution and oil distribution images, revealed the changes in the coating after cooking. The oil was detected to a depth of only 1 mm in the outer layer immediately after frying, and its distribution slightly expanded in the surface layer with time after frying. Water quickly transferred from bean curd (tofu) as 1 ingredient, to the coating along the porous network wall within 25 min after frying. [source]


Chemical shift imaging (CSI) by precise object displacement,,

MAGNETIC RESONANCE IN CHEMISTRY, Issue 3 2006
Sebastien Leclerc
Abstract A mechanical device (NMR lift) has been built to displace vertically an object (typically an NMR sample tube) inside the NMR probe with an accuracy of 1 µm. A series of single pulse experiments are performed for incremented vertical positions of the sample. With a sufficiently spatially selective radio-frequency (r.f.) field, one obtains chemical shift information along the displacement direction (one-dimensional chemical shift imaging (CSI)). Knowing the vertical r.f. field profile (the amplitude of the r.f. field along the vertical direction), one can reconstruct the spectrum associated with all the slices corresponding to consecutive sample positions and improve the spatial resolution, which is simply related to the accuracy of the displacement device. Beside tests performed on phantoms, the method has been applied to solvent penetration in polymers and to benzene diffusion in a heterogeneous zeolite medium. Copyright © 2006 John Wiley & Sons, Ltd. [source]


Comparison of phosphocreatine concentration in the human masseter and medial pterygoid muscles by 31P-CSI

JOURNAL OF ORAL REHABILITATION, Issue 11 2001
T. Kanayama
The aim of this study is to compare phosphocreatine (PCr) concentrations of human masseter and medial pterygoid muscles by a recently developed localized magnetic resonance spectroscopy (MRS) method, chemical shift imaging (CSI). The characteristic spectra of phosphorous metabolites including PCr and ,-ATP from the superficial part of the masseter (SM) and the deep part of the masseter (DM) and the medial pterygoid muscles (MPt) from 11 volunteers, 20,27-year-old were obtained. The study clearly demonstrated higher PCr/,-ATP in the SM and MPt than in the DM both in mean values (P < 0·01) and in individual subjects. The results indicate that SM and MPt are power producers. There were no significant differences in the mean values of the PCr/,-ATP ratios in SM and MPt, however, the PCr/,-ATP ratios varied individually and the subjects could be divided into three distinct groups: values of MPt higher than SM (group A, 4 subjects); values of MPt almost equal to SM (group B, 3 subjects); and values of MPt lower than SM (group C, 4 subjects). There appears to be a close relationship between the PCr content as determined in the groups here and occlusal guidance. [source]


Chemical shift imaging (CSI) by precise object displacement,,

MAGNETIC RESONANCE IN CHEMISTRY, Issue 3 2006
Sebastien Leclerc
Abstract A mechanical device (NMR lift) has been built to displace vertically an object (typically an NMR sample tube) inside the NMR probe with an accuracy of 1 µm. A series of single pulse experiments are performed for incremented vertical positions of the sample. With a sufficiently spatially selective radio-frequency (r.f.) field, one obtains chemical shift information along the displacement direction (one-dimensional chemical shift imaging (CSI)). Knowing the vertical r.f. field profile (the amplitude of the r.f. field along the vertical direction), one can reconstruct the spectrum associated with all the slices corresponding to consecutive sample positions and improve the spatial resolution, which is simply related to the accuracy of the displacement device. Beside tests performed on phantoms, the method has been applied to solvent penetration in polymers and to benzene diffusion in a heterogeneous zeolite medium. Copyright © 2006 John Wiley & Sons, Ltd. [source]


Application of subsecond spiral chemical shift imaging to real-time multislice metabolic imaging of the rat in vivo after injection of hyperpolarized 13C1 -pyruvate

MAGNETIC RESONANCE IN MEDICINE, Issue 3 2009
Dirk Mayer
Abstract Dynamic nuclear polarization can create hyperpolarized compounds with MR signal-to-noise ratio enhancements on the order of 10,000-fold. Both exogenous and normally occurring endogenous compounds can be polarized, and their initial concentration and downstream metabolic products can be assessed using MR spectroscopy. Given the transient nature of the hyperpolarized signal enhancement, fast imaging techniques are a critical requirement for real-time metabolic imaging. We report on the development of an ultrafast, multislice, spiral chemical shift imaging sequence, with subsecond acquisition time, achieved on a clinical MR scanner. The technique was used for dynamic metabolic imaging in rats, with measurement of time-resolved spatial distributions of hyperpolarized 13C1 -pyruvate and metabolic products 13C1 -lactate and 13C1 -alanine, with a temporal resolution of as fast as 1 s. Metabolic imaging revealed different signal time courses in liver from kidney. These results demonstrate the feasibility of real-time, hyperpolarized metabolic imaging and highlight its potential in assessing organ-specific kinetic parameters. Magn Reson Med, 2009. © 2009 Wiley-Liss, Inc. [source]


Natural linewidth chemical shift imaging (NL-CSI)

MAGNETIC RESONANCE IN MEDICINE, Issue 1 2006
Adil Bashir
Abstract The discrete Fourier transform (FT) is a conventional method for spatial reconstruction of chemical shifting imaging (CSI) data. Due to point spread function (PSF) effects, FT reconstruction leads to intervoxel signal leakage (Gibbs ringing). Spectral localization by imaging (SLIM) reconstruction was previously proposed to overcome this intervoxel signal contamination. However, the existence of magnetic field inhomogeneities creates an additional source of intervoxel signal leakage. It is demonstrated herein that even small field inhomogeneities substantially amplify intervoxel signal leakage in both FT and SLIM reconstruction approaches. A new CSI data acquisition strategy and reconstruction algorithm (natural linewidth (NL) CSI) is presented that eliminates effects of magnetic field inhomogeneity-induced intervoxel signal leakage and intravoxel phase dispersion on acquired data. The approach is based on acquired CSI data, high-resolution images, and magnetic field maps. The data are reconstructed based on the imaged object structure (as in the SLIM approach) and a reconstruction matrix that takes into account the inhomogeneous field distribution inside anatomically homogeneous compartments. Phantom and in vivo results show that the new method allows field inhomogeneity effects from the acquired MR signal to be removed so that the signal decay is determined only by the "natural" R2 relaxation rate constant (hence the term "natural linewidth" CSI). Magn Reson Med, 2006. © 2006 Wiley-Liss, Inc. [source]


Fast CT-PRESS-based spiral chemical shift imaging at 3 Tesla

MAGNETIC RESONANCE IN MEDICINE, Issue 5 2006
Dirk Mayer
Abstract A new sequence is presented that combines constant-time point-resolved spectroscopy (CT-PRESS) with fast spiral chemical shift imaging. It allows the acquisition of multivoxel spectra without line splitting with a minimum total measurement time of less than 5 min for a field of view of 24 cm and a nominal 1.5 × 1.5-cm2 in-plane resolution. Measurements were performed with 17 CS encoding steps in t1 (,t1 = 12.8 ms) and an average echo time of 151 ms, which was determined by simulating the CT-PRESS experiment for the spin systems of glutamate (Glu) and myo -inositol (mI). Signals from N-acetyl-aspartate, total creatine, choline-containing compounds (Cho), Glu, and mI were detected in a healthy volunteer with no or only minor baseline distortions within 14 min on a 3 T MR scanner. Magn Reson Med, 2006. © 2006 Wiley-Liss, Inc. [source]


Multiple spin-echo spectroscopic imaging for rapid quantitative assessment of N-acetylaspartate and lactate in acute stroke

MAGNETIC RESONANCE IN MEDICINE, Issue 2 2004
Astrid Stengel
Abstract Monitoring the signal levels of lactate (Lac) and N-acetylaspartate (NAA) by chemical shift imaging can provide additional knowledge about tissue damage in acute stroke. Despite the need for this metabolic information, spectroscopic imaging (SI) has not been used routinely for acute stroke patients, mainly due to the long acquisition time required. The presented data demonstrate that the application of a fast multiple spin-echo (MSE) SI sequence can reduce the measurement time to 6 min (four spin echoes per echo train, 32 × 32 matrix). Quantification of Lac and NAA in terms of absolute concentrations (i.e., mmol/l) can be achieved by means of the phantom replacement approach, with correction terms for the longitudinal and transversal relaxation adapted to the multiple spin-echo sequence. In this pilot study of 10 stroke patients (symptom onset < 24 hr), metabolite concentrations obtained from MSE-SI add important information regarding tissue viability that is not provided by other sequences (e.g., diffusion-weighted imaging (DWI) and perfusion-weighted imaging (PWI)). Metabolic changes extended beyond the borders of the apparent diffusion coefficient (ADC) lesion in nine of the 10 patients, showing a rise in Lac concentrations up to 18 mmol/l, while NAA levels sometimes dropped below the detection level. Considerable differences among the patients in terms of the Lac concentrations and the size of the SI-ADC mismatch were observed. Magn Reson Med 52:228,238, 2004. © 2004 Wiley-Liss, Inc. [source]


Accurate phosphorus metabolite images of the human heart by 3D acquisition-weighted CSI

MAGNETIC RESONANCE IN MEDICINE, Issue 5 2001
Rolf Pohmann
Abstract Fourier imaging modalities suffer from significant signal contamination between adjacent voxels, especially when the spatial resolution is comparable to the size of the anatomical structures. This contamination can be positive or negative, depending on the spatial response function and the geometry of the object. Such a situation arises in human cardiac 31P chemical shift imaging (CSI). Acquisition-weighted CSI reduces this contamination substantially, which is demonstrated by comparing conventional CSI to Hanning-weighted 3D 31P-CSI experiments in 13 healthy volunteers at 2 T. The nominal spatial resolution and the total number of scans were identical for both experiments. The improved spatial response function of the acquisition-weighted experiment led to a significantly (P < 0.0001) higher myocardial PCr/ATP ratio (2.05 ± 0.31, mean ± SD, N = 33, corrected for saturation and blood contribution) compared to the conventional CSI experiment (1.60 ± 0.46). This is explained by the absence of negative contamination from skeletal muscle, which also resulted in an increase of the observed SNR (from 5.4 ± 1.4 to 7.2 ± 1.4 for ATP). With acquisition-weighted CSI, metabolic images with a nominal resolution of 16 ml could be obtained in a measurement time of 30 min. After correction for the inhomogeneous B1 field of the surface coil, these images show uniform ATP distribution in the entire myocardium, including the posterior wall. Magn Reson Med 45:817,826, 2001. © 2001 Wiley-Liss, Inc. [source]


Comparison of oxidative capacity among leg muscles in humans using gated 31P 2-D chemical shift imaging

NMR IN BIOMEDICINE, Issue 10 2009
Sean C. Forbes
Abstract In many small animals there are distinct differences in fiber-type composition among limb muscles, and these differences typically correspond to marked disparities in the oxidative capacities. However, whether there are similar differences in the oxidative capacity among leg muscles in humans is less clear. The purpose of this study was to compare the rate of phosphocreatine (PCr) recovery, a functional in vivo marker of oxidative capacity, in the lateral and medial gastrocnemius, soleus, and the anterior compartment of the leg (primarily the tibialis anterior) of humans. Subjects performed plantar flexion and dorsiflexion gated exercise protocols consisting of 70 sets of three rapid dynamic contractions (<2.86,s) at 20,s intervals (total: 23.3,min). Starting after the sixth set of contractions, 31P 2-D CSI (8,×,8 matrix, 14,16,cm FOV, 3,cm slice, TR 2.86,s) were acquired via a linear transmit/receive surface coil using a GE 3T Excite System. The CSI data were zero-filled (32,×,32) and a single FID was produced for each time point in the lateral and medial gastrocnemius, soleus, and anterior compartment. The time constant for PCr recovery was calculated from ,,=,-,t/ln[D/(D,+,Q)], where Q is the percentage change in PCr due to contraction during the steady-state portion of the protocol, D the additional drop in PCr from rest, and ,t is the interval between contractions. The , of PCr recovery was longer (p,<,0.05) in the anterior compartment (32,±,3,s) than in the lateral (23,±,2,s) and medial gastrocnemius muscles (24,±,3,s) and the soleus (22,±,3,s) muscles. These findings suggest that the oxidative capacity is lower in the anterior compartment than in the triceps surae muscles and is consistent with the notion that fiber-type phenotypes vary among the leg muscles of humans. Copyright © 2009 John Wiley & Sons, Ltd. [source]


Brain temperature and pH measured by 1H chemical shift imaging of a thulium agent

NMR IN BIOMEDICINE, Issue 2 2009
Daniel Coman
Abstract Temperature and pH are two of the most important physiological parameters and are believed to be tightly regulated because they are intricately related to energy metabolism in living organisms. Temperature and/or pH data in mammalian brain are scarce, however, mainly because of lack of precise and non-invasive methods. At 11.7,T, we demonstrate that a thulium-based macrocyclic complex infused through the bloodstream can be used to obtain temperature and pH maps of rat brain in vivo by 1H chemical shift imaging (CSI) of the sensor itself in conjunction with a multi-parametric model that depends on several proton resonances of the sensor. Accuracies of temperature and pH determination with the thulium sensor , which has a predominantly extracellular presence , depend on stable signals during the course of the CSI experiment as well as redundancy for temperature and pH sensitivities contained within the observed signals. The thulium-based method compared well with other methods for temperature (1H MRS of N -acetylaspartate and water; copper,constantan thermocouple wire) and pH (31P MRS of inorganic phosphate and phosphocreatine) assessment, as established by in vitro and in vivo studies. In vitro studies in phantoms with two compartments of different pH value observed under different ambient temperature conditions generated precise temperature and pH distribution maps. In vivo studies in , -chloralose-anesthetized and renal-ligated rats revealed temperature (33,34°C) and pH (7.3,7.4) distributions in the cerebral cortex that are in agreement with observations by other methods. These results show that the thulium sensor can be used to measure temperature and pH distributions in rat brain in vivo simultaneously and accurately with using biosensor imaging of redundant. Copyright © 2008 John Wiley & Sons, Ltd. [source]


Kinetics of PME/Pi in pig kidneys during cold ischemia

NMR IN BIOMEDICINE, Issue 7 2007
Dominik von Elverfeldt
Abstract Quality assessment of renal grafts via 31P magnetic resonance spectroscopy (MRS) has been investigated since 1986. As ATP concentrations decay rapidly during cold ischemia, the ratio of phosphomonoesters (PME) to inorganic phosphate (PiO) within the organ (PME/PiO) is commonly used as a quality marker and is considered to be the most reliable parameter. MRS did not lead to any delay in the transplantation procedure since it was performed during the time necessary for immunological matching (cross-match). Differences in the time period until transplantation call for extrapolation of the measured ratio to the end of cold ischemia before correlating with graft performance after transplantation. Therefore, quantitative determination of PME/PiO kinetics is essential. As a model for metabolite decay in human renal grafts, pig kidneys obtained from a slaughterhouse were monitored for up to 80,h via 31P MRS at 2,T. By employing chemical shift imaging (CSI) with a spatial resolution of approximately 1,×,1,×,4,cm3, it was possible to reduce partial volume effects significantly. The improved spectral resolution gained through CSI enabled reliable PME/PiO ratios to be determined only from those voxels containing renal tissue. Spectra were fitted automatically using the magnetic resonance user interface (MRUI), with prior knowledge obtained from unlocalized spectra when necessary. A monoexponential time dependence of PME/PiO for histidine,tryptophane,alpha-ketoglutarate (HTK)-perfused kidneys during cold ischemia was observed, and the determined value of the decay constant , was 0.0099,±,0.0012,h,1. In University of Wisconsin solution (UW)-perfused kidneys, an , of 0.0183,±,0.0053,h,1 was determined. Determination of the decay constant enables a usable extrapolation of PME/PiO for quality assessment of UW perfusion and a reliable extrapolation for HTK-perfused human renal grafts. Copyright © 2007 John Wiley & Sons, Ltd. [source]